BLASTX nr result
ID: Aconitum23_contig00028909
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00028909
(765 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008351907.1| PREDICTED: uncharacterized protein LOC103415... 42 7e-11
ref|XP_008374008.1| PREDICTED: putative ribonuclease H protein A... 48 2e-09
gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japo... 47 2e-09
gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indi... 47 3e-09
ref|XP_008345353.1| PREDICTED: putative ribonuclease H protein A... 42 4e-08
ref|XP_012847426.1| PREDICTED: uncharacterized protein LOC105967... 37 9e-08
gb|EEC75227.1| hypothetical protein OsI_11496 [Oryza sativa Indi... 47 2e-07
ref|XP_010495244.1| PREDICTED: uncharacterized protein LOC104772... 39 3e-07
ref|XP_009122881.1| PREDICTED: putative ribonuclease H protein A... 39 6e-07
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 40 5e-06
>ref|XP_008351907.1| PREDICTED: uncharacterized protein LOC103415345 [Malus domestica]
Length = 1736
Score = 42.0 bits (97), Expect(3) = 7e-11
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +2
Query: 524 RELLSSYYTQHQLNII*QIPLSQFG--DRLA*FFNQNGIYSTKSGYKVAME 670
RE++ +++ + I +P+S+FG DR+ + +NG+YS KSGY VA E
Sbjct: 1365 REVIELCFSEDEAKTILSMPISRFGCPDRVVWHYTRNGVYSVKSGYIVAQE 1415
Score = 40.8 bits (94), Expect(3) = 7e-11
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 331 WKSVLFGIELLHKGLCWNIINDHSIDISKNPWYPIPTLFK 450
WK +L G ++L G+ W + + I I K+PW PIP F+
Sbjct: 1302 WKGILQGRKILKAGVRWRVGDXTCIQIGKDPWLPIPRTFR 1341
Score = 31.2 bits (69), Expect(3) = 7e-11
Identities = 16/94 (17%), Positives = 43/94 (45%)
Frame = +2
Query: 2 ASSIPTFSVTCFKYSNKSINQITKSLLHFLWGTKPQMTYLNQKFTG*IGRDWLYPKIWWD 181
A+++P ++++CF+ +I + + F W + ++ + +Y + +
Sbjct: 1191 AAALPXYTMSCFQLPIHLAKEIEQVIARFWWRDQRTKKGIHWMTWNKVAXKKVYGGLGFR 1250
Query: 182 GTKRFQCTIPSFTTWNILQNPNSILSALLKAKVF 283
F + + W ++ N S+L+ +L+AK +
Sbjct: 1251 EIIDFNLAMLAKVGWRLISNXGSJLARVLQAKYY 1284
>ref|XP_008374008.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 615
Score = 47.8 bits (112), Expect(2) = 2e-09
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 527 ELLSSYYTQHQLNII*QIPLSQFG--DRLA*FFNQNGIYSTKSGYKVAMENITQASTNTN 700
+L+S+ ++ + N I IP+S+ G DR+ F NG+YS KSGY +AME +
Sbjct: 234 DLISASFSSEEANTILSIPISKTGSCDRMGWFHTANGVYSVKSGYGIAMELMESGGLRKK 293
Query: 701 NSHKPSTSTNH 733
S T H
Sbjct: 294 GRGATSDKTKH 304
Score = 42.4 bits (98), Expect(2) = 2e-09
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 331 WKSVLFGIELLHKGLCWNIINDHSIDISKNPWYPIPTLF 447
WK +L ++L KGL W + + +I I ++PWYP P+ F
Sbjct: 169 WKGILEARKVLDKGLIWRVEDGETIKIREDPWYPKPSTF 207
>gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japonica Group]
Length = 697
Score = 47.0 bits (110), Expect(2) = 2e-09
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Frame = +2
Query: 2 ASSIPTFSVTCFKYSNKSINQITKSLLHFLWGTKPQMTYLNQKFTG*IGRDWLY-PK--- 169
A +IPT++++CF + +++T +L F W N K +G+D + PK
Sbjct: 318 AQAIPTYAMSCFYLTKSLCDELTSMILRFWWAQHD-----NDKKIHWLGKDKIMKPKSQG 372
Query: 170 -IWWDGTKRFQCTIPSFTTWNILQNPNSILSALLKAKVF 283
+ + F + + W ++QNP+S+ S LLKAK F
Sbjct: 373 GLGFRDLHSFNIAMLARQGWRLIQNPDSLCSRLLKAKYF 411
Score = 42.7 bits (99), Expect(2) = 2e-09
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 307 TKKLFFREWKSVLFGIELLHKGLCWNIINDHSIDISKNPWYP 432
++K W+S+L GI+LL KG+ W + N I+I +PW P
Sbjct: 421 SRKQMSYSWRSILKGIQLLRKGVIWRVGNGEHINIWSDPWLP 462
>gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indica Group]
Length = 697
Score = 46.6 bits (109), Expect(2) = 3e-09
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Frame = +2
Query: 2 ASSIPTFSVTCFKYSNKSINQITKSLLHFLWGTKPQMTYLNQKFTG*IGRDWLY-PK--- 169
A +IPT++++CF + +++T +L F W N K +G+D + PK
Sbjct: 318 AQAIPTYAMSCFYLTKSLCDELTSMILRFWWAQHD-----NDKKIHWLGKDKIMKPKSQG 372
Query: 170 -IWWDGTKRFQCTIPSFTTWNILQNPNSILSALLKAKVF 283
+ + F + + W ++QNP+S+ S LLKAK F
Sbjct: 373 GLAFRDLHSFNIAMLARQGWRLIQNPDSLCSRLLKAKYF 411
Score = 42.7 bits (99), Expect(2) = 3e-09
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 307 TKKLFFREWKSVLFGIELLHKGLCWNIINDHSIDISKNPWYP 432
++K W+S+L GI+LL KG+ W + N I+I +PW P
Sbjct: 421 SRKQMSYSWRSILKGIQLLRKGVIWRVGNGEHINIWSDPWLP 462
>ref|XP_008345353.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 953
Score = 42.0 bits (97), Expect(3) = 4e-08
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 13/153 (8%)
Frame = +1
Query: 112 DLSKSEIHWMNWKRLALP*NLVGWD*KISMHNTKLYHMEHPPKS*FYFVRSSQSQSILKT 291
D + IHW++W+R++ G + + + +++ K S S S+L T
Sbjct: 400 DDKRKGIHWVSWERISKQKKSGG----LGFKDIQCFNLAFLAKIGXRL--SLNSSSLLAT 453
Query: 292 HI---FCPTKKLFFRE----------WKSVLFGIELLHKGLCWNIINDHSIDISKNPWYP 432
+ + P K F+E WK + G ++L G+ W + N I+I ++ W+P
Sbjct: 454 VLRDKYHPGKS--FKEAGRGKNTSWGWKGIFEGRKVLQNGIRWRVGNGECINIREDXWFP 511
Query: 433 IPTLFKLPFQVPQHFRLVSGLTISNPLRWNKGI 531
P+ F++ V +V L S W I
Sbjct: 512 KPSTFRVRPXVDLDAIMVCDLIDSGSNSWKSNI 544
Score = 37.4 bits (85), Expect(3) = 4e-08
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 530 LLSSYYTQHQLNII*QIPLSQFG--DRLA*FFNQNGIYSTKSGYKVAMENITQASTNTNN 703
++ + + + + I IPLS FG D+ + NG YS KSGY VAM+ + +
Sbjct: 544 IIRAGFHREDADTILSIPLSYFGCDDKKVWHYTANGDYSVKSGYGVAMDLMENGALGKKG 603
Query: 704 SHKPSTSTNHTNL 742
PS N+
Sbjct: 604 RGAPSEQQQRNNV 616
Score = 25.4 bits (54), Expect(3) = 4e-08
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 2 ASSIPTFSVTCFKYSNKSINQITKSLLHFLW 94
A ++P ++++CFK I K++ F W
Sbjct: 367 AMALPNYAMSCFKLPXGVCRDIEKAIRKFWW 397
>ref|XP_012847426.1| PREDICTED: uncharacterized protein LOC105967373 [Erythranthe
guttatus]
Length = 1766
Score = 37.0 bits (84), Expect(3) = 9e-08
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +2
Query: 530 LLSSYYTQHQLNII*QIPLSQF--GDRLA*FFNQNGIYSTKSGYKVAMENITQASTNTNN 703
+LS + + +N I IPL D+L +N+NG++S +S Y +A++ + + +N
Sbjct: 1415 ILSQIFVEEDINCILSIPLGSSINEDKLMWHYNRNGLFSVRSAYYIAVQ--MEKEKDGSN 1472
Query: 704 SHKPSTST 727
S S+ST
Sbjct: 1473 SASSSSST 1480
Score = 34.3 bits (77), Expect(3) = 9e-08
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +1
Query: 331 WKSVLFGIELLHKGLCWNIINDHSIDISKNPWYPIPTLFKLPF----QVPQHFRLVSGLT 498
W+S+ I+LL KG W I N + I + W P + FK PF Q P + VS L
Sbjct: 1347 WRSICGAIDLLKKGTRWRIGNGDKVQIWGDRWLPRGSTFK-PFTPRGQWPSDMK-VSSLI 1404
Query: 499 ISNPLRWNKGI 531
S +W+ I
Sbjct: 1405 DSVTGQWDPHI 1415
Score = 32.0 bits (71), Expect(3) = 9e-08
Identities = 19/93 (20%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +2
Query: 8 SIPTFSVTCFKYSNKSINQITKSLLHFLW-GTKPQMTYLNQKFTG*IGRDWLYPKIWWDG 184
+IPT++++CF+ I ++ K + F W TK + + + +D + + +
Sbjct: 1239 AIPTYAMSCFRLPRYFIEEMEKHMAKFWWENTKGKGIHWAKWQDMCSSKD--FGGLGFRD 1296
Query: 185 TKRFQCTIPSFTTWNILQNPNSILSALLKAKVF 283
F + + W ++ +P+S+L + KA+ +
Sbjct: 1297 LNAFNTALLAKQVWRLMVSPHSLLGRIYKARYY 1329
>gb|EEC75227.1| hypothetical protein OsI_11496 [Oryza sativa Indica Group]
Length = 1059
Score = 47.0 bits (110), Expect(2) = 2e-07
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 10/154 (6%)
Frame = +1
Query: 118 SKSEIHWMNWKRLALP*NLVGWD*KISMHNTKLYHMEHPPKS*FYFVR--SSQSQSILKT 291
+K +IHW W + P L G + + KL++ K + ++ S ILK
Sbjct: 590 NKRKIHWTAWDIITRPKGLGG----LGFRDLKLFNQALLGKQAWRLIQFPGSLCARILKA 645
Query: 292 HIF--CPTKKLFFR-----EWKSVLFGIELLHKGLCWNIINDHSIDISKNPWYPIPTLFK 450
F C F WK + +G+ELL KGL W I + + + I ++ W + F
Sbjct: 646 KYFPNCELVDAVFPGDTSPTWKGIEYGLELLKKGLVWRICDGNKVKIWRDQWVQRESSFN 705
Query: 451 LPFQVPQ-HFRLVSGLTISNPLRWNKGIALLLLH 549
L + + R VS L WN+ + + H
Sbjct: 706 LIGKKNRCRLRWVSQLIRQEDKSWNEDLIRHVCH 739
Score = 36.2 bits (82), Expect(2) = 2e-07
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Frame = +2
Query: 575 QIPLSQFG--DRLA*FFNQNGIYSTKSGYKVAME----NITQASTNTNNSHKPSTSTNHT 736
+I L QF D LA F ++G+Y+ +SGY++AM+ N +S+N+ N + + +
Sbjct: 748 KIKLPQFPAEDFLAWHFEKSGVYTVRSGYRLAMKAQLGNDASSSSNSLNGERATFGRSQH 807
Query: 737 NLEGS 751
L GS
Sbjct: 808 RLSGS 812
>ref|XP_010495244.1| PREDICTED: uncharacterized protein LOC104772312 [Camelina sativa]
Length = 1200
Score = 38.5 bits (88), Expect(3) = 3e-07
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 331 WKSVLFGIELLHKGLCWNIINDHSIDISKNPWYPI--PTLFKLPFQVPQHFRLVSGLTIS 504
W+S+L G +LL KGL + + ++ SI +PW P+ P +L + V+ L +
Sbjct: 735 WQSLLVGRDLLKKGLRFTVGDETSIKTWTDPWLPVHPPRPPRLAKNIQGDSSTVNTLFLP 794
Query: 505 NPLRWNKGIALLLLHSTPIKHHL 573
N WN+ + ++ + H L
Sbjct: 795 NRSSWNESLVRDKVYLDDVNHIL 817
Score = 37.7 bits (86), Expect(3) = 3e-07
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = +2
Query: 2 ASSIPTFSVTCFKYSNKSINQITKSLLHFLWGTKPQMTYLNQKFTG*IGRDWL-YPK--- 169
A ++P +++ CFK +I + + ++ W T+ N + D L Y K
Sbjct: 624 ALAMPVYTMNCFKIPKWICEEIERIIANYWWNTQQ-----NGNAVHWVAWDRLKYMKKEG 678
Query: 170 -IWWDGTKRFQCTIPSFTTWNILQNPNSILSALLKAKVF 283
+ + ++F + + W ILQ+PNS++S +LK + F
Sbjct: 679 GLGFRDIEQFNEALLAKQAWRILQHPNSLMSRILKGRYF 717
Score = 25.4 bits (54), Expect(3) = 3e-07
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 599 DRLA*FFNQNGIYSTKSGYKVA 664
D L + +NGIY KSGY +A
Sbjct: 828 DYLGWHYTENGIYPVKSGYWLA 849
>ref|XP_009122881.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 744
Score = 38.5 bits (88), Expect(3) = 6e-07
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Frame = +2
Query: 5 SSIPTFSVTCFKYSNKSINQITKSLLHFLWGTKPQMTYLNQKFTG*IGRDWLYPKIWWDG 184
S++PT+S++CFK I +I +L F W + ++ I R +
Sbjct: 203 SAMPTYSMSCFKLPMSLIKRIQSTLTRFWWDSDHDHKKMSWISWAKITRSKHDGGLGIRD 262
Query: 185 TKRFQCTIPSFTTWNILQNPNSILSALLKAKVF*KLIF--SVQQRSCSSG 328
+ F + +W IL NPN +L+ +L K F S SCS G
Sbjct: 263 LQCFNDALLGKLSWRILTNPNGLLARILTGKYCKDSSFLDSHAPASCSHG 312
Score = 32.7 bits (73), Expect(3) = 6e-07
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +1
Query: 331 WKSVLFGIELLHKGLCWNIINDHSIDISKNPWYPIPTLFKLPFQVPQHFR--LVSGLTIS 504
W+ +L G +L+ K L W + N SI + +PW L + + + LV L
Sbjct: 313 WRGILIGRDLIVKHLGWAVGNGESIQLWNDPWLDTNKLERPMGPATEQTKDDLVKSLFQE 372
Query: 505 NPLRWNK 525
N W+K
Sbjct: 373 NSRSWDK 379
Score = 29.3 bits (64), Expect(3) = 6e-07
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 620 NQNGIYSTKSGYKVAMENITQAST 691
+ +G+YSTK+GY+ A+E T+ T
Sbjct: 412 HSSGVYSTKTGYQAAVEGKTEEPT 435
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 40.0 bits (92), Expect(2) = 5e-06
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +1
Query: 331 WKSVLFGIELLHKGLCWNIINDHSIDISKNPWYPI-PTLFKLPFQVPQHFRL-VSGLTIS 504
W+S++ G E+L +GL W I N + I +PW I L + + +H L VS L
Sbjct: 803 WRSIIAGREILKEGLGWLITNGEKVSIWNDPWLSISKPLVPIGPALREHQDLRVSALINQ 862
Query: 505 NPLRWN-KGIALLL 543
N L+W+ IA++L
Sbjct: 863 NTLQWDWNKIAVIL 876
Score = 38.1 bits (87), Expect(2) = 5e-06
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Frame = +2
Query: 5 SSIPTFSVTCFKYSNKSINQITKSLLHFLWGTKPQM---------TYLNQKFTG*IGRDW 157
+S+P +S++CFK + +I L F W TKP + N K G +G
Sbjct: 693 ASMPLYSMSCFKLPSALCRKIQSLLTRFWWDTKPDVRKTSWVAWSKLTNPKNAGGLG--- 749
Query: 158 LYPKIWWDGTKRFQCTIPSFTTWNILQNPNSILSALLKAK 277
+ +R ++ + W +L +P S+LS +L K
Sbjct: 750 ------FRDIERCNDSLLAKLGWRLLNSPESLLSRILLGK 783