BLASTX nr result
ID: Aconitum23_contig00028700
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00028700
(329 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010267723.1| PREDICTED: mediator of RNA polymerase II tra... 58 2e-14
ref|XP_012470937.1| PREDICTED: mediator of RNA polymerase II tra... 48 4e-10
gb|KHG19994.1| Nucleolysin TIAR [Gossypium arboreum] 47 9e-10
ref|XP_004509361.1| PREDICTED: mediator of RNA polymerase II tra... 45 1e-08
ref|XP_012085966.1| PREDICTED: mediator of RNA polymerase II tra... 42 2e-08
ref|XP_004142109.1| PREDICTED: mediator of RNA polymerase II tra... 45 3e-08
ref|XP_002870993.1| hypothetical protein ARALYDRAFT_487063 [Arab... 42 5e-08
ref|XP_010100053.1| hypothetical protein L484_013165 [Morus nota... 45 1e-07
ref|XP_008449288.1| PREDICTED: mediator of RNA polymerase II tra... 45 1e-07
emb|CDP19144.1| unnamed protein product [Coffea canephora] 47 2e-07
ref|XP_006398742.1| hypothetical protein EUTSA_v10013588mg [Eutr... 40 5e-07
ref|XP_003620733.2| vitamin-D-receptor interacting mediator subu... 44 7e-07
gb|AAP40461.1| unknown protein [Arabidopsis thaliana] 42 1e-06
ref|NP_195905.1| hydroxyproline-rich glycoprotein family protein... 42 1e-06
ref|XP_003629316.1| vitamin-D-receptor interacting mediator subu... 40 1e-06
ref|XP_002525192.1| conserved hypothetical protein [Ricinus comm... 39 2e-06
ref|XP_008376220.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ... 39 3e-06
ref|XP_010553019.1| PREDICTED: mediator of RNA polymerase II tra... 41 5e-06
ref|XP_009599957.1| PREDICTED: mediator of RNA polymerase II tra... 45 5e-06
ref|XP_009794892.1| PREDICTED: mediator of RNA polymerase II tra... 45 5e-06
>ref|XP_010267723.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Nelumbo nucifera] gi|720037602|ref|XP_010267724.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 4 [Nelumbo nucifera]
gi|720037605|ref|XP_010267726.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 4 [Nelumbo
nucifera] gi|720037608|ref|XP_010267727.1| PREDICTED:
mediator of RNA polymerase II transcription subunit 4
[Nelumbo nucifera] gi|720037611|ref|XP_010267728.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 4 [Nelumbo nucifera]
Length = 427
Score = 58.2 bits (139), Expect(2) = 2e-14
Identities = 30/56 (53%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = -1
Query: 161 MPVPPPGWKPSDXXXXXXXXXXXXXP--EEQQPRHA-GHLPPKGPEPIQVRYVQLD 3
+PVPPPGWKP D E+Q PR A +PPK PEPIQVRYVQLD
Sbjct: 347 LPVPPPGWKPGDPVTLPPLDALVGPNKGEDQPPRPAVSQMPPKAPEPIQVRYVQLD 402
Score = 47.0 bits (110), Expect(2) = 2e-14
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
Frame = -2
Query: 286 VETKERTIDSLVEPSPMKPSES---ADMAAIHGIIPPQFTAPS 167
VETKE+T+ +L+E +KP E+ D+AAI G+IPPQ T PS
Sbjct: 291 VETKEKTVVTLIEAPSLKPVETNPPIDLAAIQGLIPPQLTIPS 333
>ref|XP_012470937.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Gossypium raimondii] gi|823142272|ref|XP_012470938.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 4 [Gossypium raimondii]
gi|763752147|gb|KJB19535.1| hypothetical protein
B456_003G108400 [Gossypium raimondii]
gi|763752148|gb|KJB19536.1| hypothetical protein
B456_003G108400 [Gossypium raimondii]
gi|763752149|gb|KJB19537.1| hypothetical protein
B456_003G108400 [Gossypium raimondii]
Length = 491
Score = 48.1 bits (113), Expect(2) = 4e-10
Identities = 18/42 (42%), Positives = 34/42 (80%), Gaps = 3/42 (7%)
Frame = -2
Query: 283 ETKERTIDSLVEPSPMKPSES---ADMAAIHGIIPPQFTAPS 167
ETKE+T+++++EP P +P+++ A++AA+ G++PP FT P+
Sbjct: 360 ETKEKTVEAIIEPPPAQPADTNPLANLAALQGLLPPNFTVPA 401
Score = 42.7 bits (99), Expect(2) = 4e-10
Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -1
Query: 167 SGMPVPPPGWKPSDXXXXXXXXXXXXXPEEQQPRHAGHLPP---KGPEPIQVRYVQLD 3
+ +PVPPPGWKP D E P PP K PEPIQVR+V+LD
Sbjct: 413 ANLPVPPPGWKPGDPVPLPPLDSLSIPRME-GPNMRPVPPPGLHKQPEPIQVRHVELD 469
>gb|KHG19994.1| Nucleolysin TIAR [Gossypium arboreum]
Length = 491
Score = 47.0 bits (110), Expect(2) = 9e-10
Identities = 17/42 (40%), Positives = 34/42 (80%), Gaps = 3/42 (7%)
Frame = -2
Query: 283 ETKERTIDSLVEPSPMKPSES---ADMAAIHGIIPPQFTAPS 167
ET+E+T+++++EP P +P+++ A++AA+ G++PP FT P+
Sbjct: 360 ETREKTVEAIIEPPPAQPADTNPLANLAALQGLLPPNFTVPA 401
Score = 42.7 bits (99), Expect(2) = 9e-10
Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -1
Query: 167 SGMPVPPPGWKPSDXXXXXXXXXXXXXPEEQQPRHAGHLPP---KGPEPIQVRYVQLD 3
+ +PVPPPGWKP D E P PP K PEPIQVR+V+LD
Sbjct: 413 ANLPVPPPGWKPGDPVPLPPLDSLSIPRME-GPNMRPVPPPGLHKPPEPIQVRHVELD 469
>ref|XP_004509361.1| PREDICTED: mediator of RNA polymerase II transcription subunit
4-like [Cicer arietinum]
Length = 402
Score = 45.1 bits (105), Expect(2) = 1e-08
Identities = 17/42 (40%), Positives = 33/42 (78%), Gaps = 3/42 (7%)
Frame = -2
Query: 286 VETKERTIDSLVEPSPMKPSES---ADMAAIHGIIPPQFTAP 170
VETKE+T+++++EP P+ P ++ ++++AI G++PP F+ P
Sbjct: 273 VETKEKTVEAIIEPPPVHPVDTNPLSNLSAIQGLLPPNFSVP 314
Score = 40.8 bits (94), Expect(2) = 1e-08
Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Frame = -1
Query: 164 GMPV---------PPPGWKPSDXXXXXXXXXXXXXPEEQQPRHAGHLP-PKGPEPIQVRY 15
GMPV PPPGWKP D E +P+ H+P PK PE IQV++
Sbjct: 320 GMPVQLPIDIPIKPPPGWKPGDPVALPPMDSLQVPRFE-EPKLLPHIPQPKQPEVIQVQH 378
Query: 14 VQLD 3
V LD
Sbjct: 379 VNLD 382
>ref|XP_012085966.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Jatropha curcas] gi|643713346|gb|KDP26214.1|
hypothetical protein JCGZ_22460 [Jatropha curcas]
Length = 417
Score = 42.4 bits (98), Expect(3) = 2e-08
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = -1
Query: 167 SGMPVPPPGWKPSDXXXXXXXXXXXXXPEEQQPRHAGHLPPKGPEPIQVRYVQLD 3
+ +P PPPGWKP D E+Q A K PE IQVR+VQ+D
Sbjct: 341 TNLPPPPPGWKPGDPLPPLESLPLPRMVEQQLQPVAPQGLHKPPETIQVRHVQID 395
Score = 40.4 bits (93), Expect(3) = 2e-08
Identities = 19/45 (42%), Positives = 32/45 (71%), Gaps = 4/45 (8%)
Frame = -2
Query: 289 QVETKERTIDSLVE-PSPMKPSES---ADMAAIHGIIPPQFTAPS 167
++ETKE+TI++++E P P +P+E+ A+ AI G++P T PS
Sbjct: 285 KIETKEKTIEAIIELPPPAQPAETNPFANFPAIQGLLPTNITVPS 329
Score = 21.9 bits (45), Expect(3) = 2e-08
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3
Query: 327 LYAFADLDV 301
LYAFADLDV
Sbjct: 272 LYAFADLDV 280
>ref|XP_004142109.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Cucumis sativus] gi|700199030|gb|KGN54188.1|
hypothetical protein Csa_4G292980 [Cucumis sativus]
Length = 404
Score = 44.7 bits (104), Expect(2) = 3e-08
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 161 MPVPPPGWKPSDXXXXXXXXXXXXXPEEQQPRHAGHLP--PKGPEPIQVRYVQLD 3
+P+PPPGWKP D ++ LP K PEPIQVR+VQLD
Sbjct: 328 LPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLD 382
Score = 39.7 bits (91), Expect(2) = 3e-08
Identities = 18/41 (43%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = -2
Query: 286 VETKERTIDSLVEP-SPMKPSESADMAAIHGIIPPQFTAPS 167
VE+ E+TI+ ++EP +P++P ++ +AAI G++PP T PS
Sbjct: 275 VESTEKTIEPMIEPPAPVRP-DANPLAAIQGLLPPNITVPS 314
>ref|XP_002870993.1| hypothetical protein ARALYDRAFT_487063 [Arabidopsis lyrata subsp.
lyrata] gi|297316830|gb|EFH47252.1| hypothetical protein
ARALYDRAFT_487063 [Arabidopsis lyrata subsp. lyrata]
Length = 428
Score = 41.6 bits (96), Expect(3) = 5e-08
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = -2
Query: 286 VETKERTIDSLVEPSPMKPSESADMAAIHGIIPPQFTAPS 167
VE E+ +++L+EP P P E+ D++AIH ++PP PS
Sbjct: 302 VENMEKKVEALIEPPP-PPPEAMDISAIHNLLPPNIAVPS 340
Score = 39.7 bits (91), Expect(3) = 5e-08
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -1
Query: 161 MPVPPPGWKPSDXXXXXXXXXXXXXPEEQQPRHAGHLPPKG----PEPIQVRYVQLD 3
+P+PPPGWKP D E Q PP+G P+ IQVR VQLD
Sbjct: 354 LPLPPPGWKPGDPVVLPPLESIAAPRAEDQQHMR---PPQGLHRPPDVIQVRAVQLD 407
Score = 21.6 bits (44), Expect(3) = 5e-08
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3
Query: 327 LYAFADLDV 301
LYAFADLD+
Sbjct: 288 LYAFADLDI 296
>ref|XP_010100053.1| hypothetical protein L484_013165 [Morus notabilis]
gi|587892649|gb|EXB81224.1| hypothetical protein
L484_013165 [Morus notabilis]
Length = 416
Score = 44.7 bits (104), Expect(2) = 1e-07
Identities = 24/53 (45%), Positives = 27/53 (50%)
Frame = -1
Query: 161 MPVPPPGWKPSDXXXXXXXXXXXXXPEEQQPRHAGHLPPKGPEPIQVRYVQLD 3
+P+PPPGWKP D +Q L PK PEPIQVR VQLD
Sbjct: 347 LPMPPPGWKPGDPVPLPPLASLPVPRVGEQ-----QLRPKPPEPIQVRPVQLD 394
Score = 37.7 bits (86), Expect(2) = 1e-07
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = -2
Query: 286 VETKERTIDSLVEPSPMKPSES---ADMAAIHGIIPPQFTAPS 167
VE+ E+T++ ++EP P+ES A++A I G++ P T PS
Sbjct: 291 VESDEKTVEPMIEPPAPAPTESNPLANLATIQGLLHPNITVPS 333
>ref|XP_008449288.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Cucumis melo]
Length = 407
Score = 44.7 bits (104), Expect(2) = 1e-07
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 161 MPVPPPGWKPSDXXXXXXXXXXXXXPEEQQPRHAGHLP--PKGPEPIQVRYVQLD 3
+P+PPPGWKP D ++ LP K PEPIQVR+VQLD
Sbjct: 331 LPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLD 385
Score = 37.7 bits (86), Expect(2) = 1e-07
Identities = 18/43 (41%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
Frame = -2
Query: 286 VETKERTIDSLVEP-SPMKPSES--ADMAAIHGIIPPQFTAPS 167
VE+ E+TI+ ++EP +P++ + ++MAAI G++PP T PS
Sbjct: 275 VESTEKTIEPMIEPPAPVRVDANPLSNMAAIQGLLPPNITVPS 317
>emb|CDP19144.1| unnamed protein product [Coffea canephora]
Length = 364
Score = 47.4 bits (111), Expect(3) = 2e-07
Identities = 29/62 (46%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Frame = -1
Query: 167 SGMPV-PPPGWKPSD--XXXXXXXXXXXXXPEEQQPRHAGHLPP----KGPEPIQVRYVQ 9
S +P+ PPPGWKP D EEQQP+ H+PP K PEPIQV +VQ
Sbjct: 287 SDLPILPPPGWKPGDPVALPPLDSLPVPPRIEEQQPQ---HIPPPMLTKAPEPIQVLHVQ 343
Query: 8 LD 3
LD
Sbjct: 344 LD 345
Score = 32.0 bits (71), Expect(3) = 2e-07
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = -2
Query: 283 ETKERTIDSLVEP---SPMKPSESADMAAIHGIIPPQFTAPS 167
E K++ I+ L+E P +P+ A++A + G++PP PS
Sbjct: 234 EHKKKIIEPLIETPVGQPAEPNPLANLAGMQGLLPPNIAVPS 275
Score = 21.9 bits (45), Expect(3) = 2e-07
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3
Query: 327 LYAFADLDV 301
LYAFADLDV
Sbjct: 219 LYAFADLDV 227
>ref|XP_006398742.1| hypothetical protein EUTSA_v10013588mg [Eutrema salsugineum]
gi|557099832|gb|ESQ40195.1| hypothetical protein
EUTSA_v10013588mg [Eutrema salsugineum]
Length = 435
Score = 39.7 bits (91), Expect(3) = 5e-07
Identities = 16/40 (40%), Positives = 28/40 (70%)
Frame = -2
Query: 286 VETKERTIDSLVEPSPMKPSESADMAAIHGIIPPQFTAPS 167
VET E+ +++L+EP P+ P E+ +++AI ++PP PS
Sbjct: 308 VETMEKKVEALMEP-PLPPPETVNLSAIQNLLPPDIAVPS 346
Score = 38.1 bits (87), Expect(3) = 5e-07
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = -1
Query: 161 MPVPPPGWKPSDXXXXXXXXXXXXXPEEQQPRHAGHLPPKG----PEPIQVRYVQLD 3
+P+PPPGWKP D ++Q + PP G P+ IQVR VQLD
Sbjct: 360 LPLPPPGWKPGDPVVLPPLESILAPRAQEQQQM--RPPPPGLHRPPDVIQVRPVQLD 414
Score = 21.6 bits (44), Expect(3) = 5e-07
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3
Query: 327 LYAFADLDV 301
LYAFADLD+
Sbjct: 294 LYAFADLDI 302
>ref|XP_003620733.2| vitamin-D-receptor interacting mediator subunit 4 [Medicago
truncatula] gi|657383533|gb|AES76951.2|
vitamin-D-receptor interacting mediator subunit 4
[Medicago truncatula]
Length = 400
Score = 43.5 bits (101), Expect(2) = 7e-07
Identities = 17/42 (40%), Positives = 31/42 (73%), Gaps = 3/42 (7%)
Frame = -2
Query: 283 ETKERTIDSLVEPSPMKPSES---ADMAAIHGIIPPQFTAPS 167
ET E+TI++++EP P++P ++ A++ I G++PP FT P+
Sbjct: 275 ETTEKTIEAIIEPPPLQPVDANSLANLPGIQGLLPPNFTVPA 316
Score = 36.2 bits (82), Expect(2) = 7e-07
Identities = 25/64 (39%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Frame = -1
Query: 164 GMPV---------PPPGWKPSDXXXXXXXXXXXXXPEEQQPRHAGHLP-PKGPEPIQVRY 15
GMPV PPPGWKP D ++ P H+P PK PE IQV
Sbjct: 321 GMPVQLPIDIPIKPPPGWKPGDPVALDSLSIPRIEEQQLHP----HVPQPKLPEIIQVAP 376
Query: 14 VQLD 3
V LD
Sbjct: 377 VNLD 380
>gb|AAP40461.1| unknown protein [Arabidopsis thaliana]
Length = 426
Score = 41.6 bits (96), Expect(2) = 1e-06
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = -2
Query: 286 VETKERTIDSLVEPSPMKPSESADMAAIHGIIPPQFTAPS 167
VE E+ +++L+EP P P E+ D++AIH ++PP PS
Sbjct: 301 VENMEKKVEALIEPPP--PPEAMDISAIHNLLPPNIAVPS 338
Score = 37.4 bits (85), Expect(2) = 1e-06
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = -1
Query: 161 MPVPPPGWKPSDXXXXXXXXXXXXXPEE----QQPRHAGHLPPKGPEPIQVRYVQLD 3
+P+PPPGWKP D E +P H P P+ IQVR VQLD
Sbjct: 352 LPLPPPGWKPGDPVVLPPLESIAAPRAEDHQHMRPSQGLHRP---PDVIQVRAVQLD 405
>ref|NP_195905.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
thaliana] gi|75181168|sp|Q9LZ00.1|MED4_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
4 gi|7413560|emb|CAB86039.1| putative protein
[Arabidopsis thaliana] gi|332003144|gb|AED90527.1|
hydroxyproline-rich glycoprotein family protein
[Arabidopsis thaliana]
Length = 426
Score = 41.6 bits (96), Expect(2) = 1e-06
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = -2
Query: 286 VETKERTIDSLVEPSPMKPSESADMAAIHGIIPPQFTAPS 167
VE E+ +++L+EP P P E+ D++AIH ++PP PS
Sbjct: 301 VENMEKKVEALIEPPP--PPEAMDISAIHNLLPPNIAVPS 338
Score = 37.4 bits (85), Expect(2) = 1e-06
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = -1
Query: 161 MPVPPPGWKPSDXXXXXXXXXXXXXPEE----QQPRHAGHLPPKGPEPIQVRYVQLD 3
+P+PPPGWKP D E +P H P P+ IQVR VQLD
Sbjct: 352 LPLPPPGWKPGDPVVLPPLESIAAPRAEDHQHMRPSQGLHRP---PDVIQVRAVQLD 405
>ref|XP_003629316.1| vitamin-D-receptor interacting mediator subunit 4 [Medicago
truncatula] gi|355523338|gb|AET03792.1|
vitamin-D-receptor interacting mediator subunit 4
[Medicago truncatula]
Length = 402
Score = 40.0 bits (92), Expect(2) = 1e-06
Identities = 16/40 (40%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = -2
Query: 286 VETKERTIDSLVEPSP-MKPSESADMAAIHGIIPPQFTAP 170
VETKE+T+++++EP P + + +++AI G++PP F P
Sbjct: 274 VETKEKTVEAIIEPPPSVDTNPLGNLSAIQGMLPPNFAIP 313
Score = 38.9 bits (89), Expect(2) = 1e-06
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -1
Query: 161 MPV-PPPGWKPSDXXXXXXXXXXXXXPEEQQPRHAGHLP-PKGPEPIQVRYVQLD 3
MP+ PPPGWKP D E+Q + H+P P+ PE IQV++V LD
Sbjct: 328 MPIKPPPGWKPGDPVALPPIDSLPVPRFEEQ-KLPPHIPQPRQPEIIQVQHVNLD 381
>ref|XP_002525192.1| conserved hypothetical protein [Ricinus communis]
gi|223535489|gb|EEF37158.1| conserved hypothetical
protein [Ricinus communis]
Length = 401
Score = 39.3 bits (90), Expect(3) = 2e-06
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = -1
Query: 161 MPVPPPGWKPSDXXXXXXXXXXXXXPEEQQPRHAGHLPP---KGPEPIQVRYVQLD 3
+P PPPGWKP D +Q P K PE IQVR+VQ+D
Sbjct: 324 LPPPPPGWKPGDPLPLPPLDSLPLPRTNEQQLQPAVAPQGLHKPPETIQVRHVQID 379
Score = 36.6 bits (83), Expect(3) = 2e-06
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = -2
Query: 289 QVETKERTIDSLVEPSPMKPSESAD---MAAIHGIIPPQFTAPS 167
+ ET+ER I+ ++EP P P +SAD + + G+ PP T PS
Sbjct: 269 KTETRERIIEPIIEPPP--PPQSADTNPLGNLAGLFPPSLTVPS 310
Score = 21.9 bits (45), Expect(3) = 2e-06
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3
Query: 327 LYAFADLDV 301
LYAFADLDV
Sbjct: 257 LYAFADLDV 265
>ref|XP_008376220.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 4 [Malus domestica]
Length = 386
Score = 39.3 bits (90), Expect(2) = 3e-06
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = -2
Query: 286 VETKERTIDSLVEPSPMKPSESA-DMAAIHGIIPPQFTAPS 167
VE KE T+ +++EP+P +P+ ++ A+ G++PP T PS
Sbjct: 263 VEGKEETMQAMLEPTPPEPTNQLPNLGALQGLLPPNITVPS 303
Score = 38.5 bits (88), Expect(2) = 3e-06
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 PVPPPGWKPSDXXXXXXXXXXXXXPEEQQPRHAGH-LPPKGPEPIQVRYVQLD 3
PVPPPGWKP D E+QQ R H K P IQV++V+LD
Sbjct: 318 PVPPPGWKPGD-----PVPLPVPRVEDQQLRPNAHPAVHKPPATIQVQHVELD 365
>ref|XP_010553019.1| PREDICTED: mediator of RNA polymerase II transcription subunit
4-like [Tarenaya hassleriana]
Length = 426
Score = 40.8 bits (94), Expect(2) = 5e-06
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -1
Query: 161 MPVPPPGWKPSDXXXXXXXXXXXXXPEEQQPRHAGHLPP---KGPEPIQVRYVQLD 3
+P+PPPGWKP D ++Q PP + PE IQVR VQLD
Sbjct: 350 LPMPPPGWKPGDPVVLPPLESIPAARGDEQQPLVPRPPPGLHRAPEVIQVRPVQLD 405
Score = 36.2 bits (82), Expect(2) = 5e-06
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = -2
Query: 298 ITYQVETKERTIDSLVEPSPMKPSESADMAAIHGIIPPQFTAPS 167
I E+ E+ +++L+EP +PS D++AI G++PP PS
Sbjct: 295 IPKSTESDEKKVEALMEPP--RPSGPVDISAIQGLLPPNIAVPS 336
>ref|XP_009599957.1| PREDICTED: mediator of RNA polymerase II transcription subunit
4-like [Nicotiana tomentosiformis]
Length = 398
Score = 44.7 bits (104), Expect(2) = 5e-06
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = -1
Query: 161 MPVPPPGWKPSDXXXXXXXXXXXXXPE-EQQPRHAGHLPPKG----PEPIQVRYVQLD 3
+P+PPPGWKP D P+ E+ P A +PP G PEPIQVR+VQLD
Sbjct: 325 LPLPPPGWKPGDPIALPPVDSLPLPPKVEEAP--ARPVPPPGLPRMPEPIQVRHVQLD 380
Score = 32.3 bits (72), Expect(2) = 5e-06
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -2
Query: 283 ETKERTIDSLVEPSPMKPSESADMAAIHGIIPPQFTAPS 167
+ KE+ I+ L+EPS ++ +++AI G+IPP PS
Sbjct: 277 DDKEKIIEPLIEPS----ADITNLSAIPGLIPPNIIVPS 311
>ref|XP_009794892.1| PREDICTED: mediator of RNA polymerase II transcription subunit
4-like, partial [Nicotiana sylvestris]
Length = 169
Score = 44.7 bits (104), Expect(2) = 5e-06
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = -1
Query: 161 MPVPPPGWKPSDXXXXXXXXXXXXXPE-EQQPRHAGHLPPKG----PEPIQVRYVQLD 3
+P+PPPGWKP D P+ E+ P A +PP G PEPIQVR+VQLD
Sbjct: 96 LPLPPPGWKPGDPIALPPVDSLPLPPKVEEAP--ARPVPPPGLPRMPEPIQVRHVQLD 151
Score = 32.3 bits (72), Expect(2) = 5e-06
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -2
Query: 283 ETKERTIDSLVEPSPMKPSESADMAAIHGIIPPQFTAPS 167
+ KE+ I+ L+EPS ++ +++AI G+IPP PS
Sbjct: 48 DDKEKIIEPLIEPS----ADITNLSAIPGLIPPNIIVPS 82