BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00028528
         (624 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010268791.1| PREDICTED: pentatricopeptide repeat-containi...   196   1e-47
ref|XP_008230272.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   188   2e-45
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...   188   2e-45
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]   186   9e-45
ref|XP_007216136.1| hypothetical protein PRUPE_ppa019108mg, part...   186   1e-44
ref|XP_008356170.1| PREDICTED: pentatricopeptide repeat-containi...   185   2e-44
ref|XP_009357088.1| PREDICTED: pentatricopeptide repeat-containi...   184   4e-44
ref|XP_010556824.1| PREDICTED: pentatricopeptide repeat-containi...   181   4e-43
ref|XP_002517972.1| pentatricopeptide repeat-containing protein,...   180   6e-43
ref|XP_012088342.1| PREDICTED: pentatricopeptide repeat-containi...   179   1e-42
ref|XP_004306008.1| PREDICTED: pentatricopeptide repeat-containi...   179   1e-42
ref|XP_006366001.1| PREDICTED: pentatricopeptide repeat-containi...   177   3e-42
ref|XP_004248468.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   177   4e-42
ref|XP_009782593.1| PREDICTED: pentatricopeptide repeat-containi...   176   1e-41
ref|XP_009602573.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   176   1e-41
ref|XP_010261461.1| PREDICTED: putative pentatricopeptide repeat...   174   3e-41
ref|XP_010095814.1| hypothetical protein L484_022170 [Morus nota...   171   2e-40
ref|XP_006404782.1| hypothetical protein EUTSA_v10000094mg [Eutr...   170   5e-40
ref|XP_009111152.1| PREDICTED: pentatricopeptide repeat-containi...   169   1e-39
ref|XP_011045469.1| PREDICTED: pentatricopeptide repeat-containi...   168   2e-39

>ref|XP_010268791.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Nelumbo nucifera]
          Length = 651

 Score =  196 bits (497), Expect = 1e-47
 Identities = 106/177 (59%), Positives = 129/177 (72%), Gaps = 5/177 (2%)
 Frame = -2

Query: 578 RRHYTSLI-----ENYTNPSPQSEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYASLL 414
           RRHY+SL+     ++  NPS  S+IL L K GSL  A+QLLNSTDS +ISIKPV+YASLL
Sbjct: 6   RRHYSSLLPLDLKKSKRNPSLGSKILFLCKSGSLLGALQLLNSTDSSEISIKPVVYASLL 65

Query: 413 QTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERDV 234
           QTC KAHSFN GLQI SH+IKSGLE DRFVGNSLLS+YFKL   F ETRKVFD L  +DV
Sbjct: 66  QTCTKAHSFNLGLQIQSHIIKSGLESDRFVGNSLLSLYFKLSADFSETRKVFDCLLVKDV 125

Query: 233 ISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGRYY 63
           ISWTSMISGY   G+  +++ +F +ML+ G+ P+     + + ACS  G L  GR +
Sbjct: 126 ISWTSMISGYLHVGKPMESLEMFEKMLEFGVEPNAFTLSAAIKACSELGTLKLGRCF 182



 Score =  109 bits (273), Expect = 1e-21
 Identities = 54/142 (38%), Positives = 90/142 (63%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L+ C    +   G +IH   ++ G   D  V ++L+ +Y K G   +  R +F  +
Sbjct: 363 FGTVLRACAGLAAVRQGKEIHCQYLRMGSWRDVIVESALVDLYAKCGFIDYAYR-IFVEI 421

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             R++I+W SMI G+  NG+G +A+ +F+EM+  G+IPD I+FV VL ACSH+GL+++G+
Sbjct: 422 PFRNLITWNSMICGFAQNGRGEEAIGMFNEMVKEGIIPDYISFVGVLFACSHTGLVEQGK 481

Query: 68  YYFRLMTRDYTMVPRIEHYACM 3
            +F+ M+ DY +   IEHY CM
Sbjct: 482 KHFKSMS-DYGIKAGIEHYNCM 502



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 35/120 (29%), Positives = 66/120 (55%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L  C        G ++H+ V+ +G+  +  V +SL+ MY K G    E+ KVFD +
Sbjct: 265 FGTVLTACGNLGRMKQGKEVHAKVVTAGICGNLVVESSLVDMYGKCGL-VEESHKVFDRM 323

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
            +++ +SW +++ GY  NG    A+ +F  M+D   + D  +F +VL AC+    + +G+
Sbjct: 324 PQKNSVSWCALLGGYCQNGDFESAIKIF-RMMDK--VDDLYSFGTVLRACAGLAAVRQGK 380


>ref|XP_008230272.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g03540 [Prunus mume]
          Length = 620

 Score =  188 bits (477), Expect = 2e-45
 Identities = 99/184 (53%), Positives = 133/184 (72%), Gaps = 5/184 (2%)
 Frame = -2

Query: 581 YRRHYTSL----IENYTNPSP-QSEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYASL 417
           ++RH +SL    +++  NPSP QS+IL L KLG LS A+++LN+ DS +I++KP++YASL
Sbjct: 5   FKRHCSSLTSLNLQSTKNPSPKQSQILRLCKLGLLSDAIRVLNAIDSGEITLKPILYASL 64

Query: 416 LQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERD 237
           LQTC  A SFNHGLQIH+HV+KSGLE DRFVGNSLLS+YFKL     ETRKVFD LF +D
Sbjct: 65  LQTCTNAVSFNHGLQIHAHVVKSGLETDRFVGNSLLSLYFKLVPNMSETRKVFDGLFVKD 124

Query: 236 VISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGRYYFR 57
           VISWTSMI+GY   G+  +++ +F +ML  G+ P+     +V+ ACS  G L  G  +  
Sbjct: 125 VISWTSMITGYVRAGKPGNSIEVFYDMLKFGIEPNAFTLSAVVKACSEIGDLMLGLCFHG 184

Query: 56  LMTR 45
           ++ R
Sbjct: 185 VVVR 188



 Score =  114 bits (284), Expect = 6e-23
 Identities = 55/141 (39%), Positives = 88/141 (62%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L+ C    +   G ++H   ++     D  V ++L+++Y K G   F  R+VF  +
Sbjct: 350 FGTVLRACAGLAAVQQGKEVHCQYVRRCGWRDVIVESALVNLYAKCGCIDF-ARRVFTQM 408

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             R++I+W SMI G+  NG G +A+ +F  M+  G+ PD I+F+ VL ACSH+GL+D+GR
Sbjct: 409 PVRNLITWNSMICGFAQNGGGAEALRIFDRMIKEGVKPDYISFIGVLFACSHAGLVDQGR 468

Query: 68  YYFRLMTRDYTMVPRIEHYAC 6
            YF LMT++Y + P IEHY C
Sbjct: 469 NYFILMTKEYGIKPGIEHYCC 489


>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Vitis vinifera]
          Length = 633

 Score =  188 bits (477), Expect = 2e-45
 Identities = 101/175 (57%), Positives = 126/175 (72%), Gaps = 2/175 (1%)
 Frame = -2

Query: 581 YRRHYTSL--IENYTNPSPQSEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYASLLQT 408
           ++R+Y+ L  +    N +P S+IL L K G LS A+QLL S D  +IS KPV+YASLLQT
Sbjct: 9   FKRYYSLLTPLNLSDNTNPFSKILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQT 68

Query: 407 CIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERDVIS 228
           C K  +FNHGLQIH+HVIKSGLEFDRFVGNSLL++YFKLG  F ETRKVFD LF +DVIS
Sbjct: 69  CTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVIS 128

Query: 227 WTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGRYY 63
           WTSMISGY   G+  +++ LF +ML  G+ P+     +V+ ACS  G L  GR +
Sbjct: 129 WTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIF 183



 Score =  119 bits (299), Expect = 1e-24
 Identities = 56/142 (39%), Positives = 91/142 (64%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L+TC    +   G ++H   I+ G   D  V ++L+ +Y K G   +  + +FD +
Sbjct: 363 FGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEY-AQTIFDQM 421

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             R++I+W SMI G+  NG+G +A+ +F++M+  G+ PD I+F+ +L ACSH GL+DEGR
Sbjct: 422 PVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGR 481

Query: 68  YYFRLMTRDYTMVPRIEHYACM 3
            YF  MT+DY +   IEHY+CM
Sbjct: 482 EYFISMTKDYGIKVGIEHYSCM 503



 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
 Frame = -2

Query: 527 SEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYASLLQTCIKAHSFNHGLQIHSHVIKS 348
           S I    ++G    +++L     ++ +       +++++ C +      G   H  V+  
Sbjct: 131 SMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGR 190

Query: 347 GLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERDVISWTSMISGYGMNGQGRDAVAL 168
           G + +  + ++L+ M+ +      + R++FD L E D I WTS+IS    N    +A+  
Sbjct: 191 GFDSNYVIASALIDMHGR-NCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRF 249

Query: 167 FSEML-DSGLIPDQIAFVSVLSACSHSGLLDEGR 69
           F  M  D G+ PD   F +VL+AC + G L +G+
Sbjct: 250 FYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGK 283


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  186 bits (472), Expect = 9e-45
 Identities = 98/160 (61%), Positives = 118/160 (73%)
 Frame = -2

Query: 542 NPSPQSEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYASLLQTCIKAHSFNHGLQIHS 363
           N +P S+IL L K G LS A+QLL S D  +IS KPV+YASLLQTC K  +FNHGLQIH+
Sbjct: 83  NTNPFSKILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHA 142

Query: 362 HVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERDVISWTSMISGYGMNGQGR 183
           HVIKSGLEFDRFVGNSLL++YFKLG  F ETRKVFD LF +DVISWTSMISGY   G+  
Sbjct: 143 HVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPM 202

Query: 182 DAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGRYY 63
           +++ LF +ML  G+ P+     +V+ ACS  G L  GR +
Sbjct: 203 NSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIF 242



 Score =  119 bits (299), Expect = 1e-24
 Identities = 56/142 (39%), Positives = 91/142 (64%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L+TC    +   G ++H   I+ G   D  V ++L+ +Y K G   +  + +FD +
Sbjct: 422 FGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEY-AQTIFDQM 480

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             R++I+W SMI G+  NG+G +A+ +F++M+  G+ PD I+F+ +L ACSH GL+DEGR
Sbjct: 481 PVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGR 540

Query: 68  YYFRLMTRDYTMVPRIEHYACM 3
            YF  MT+DY +   IEHY+CM
Sbjct: 541 EYFISMTKDYGIKVGIEHYSCM 562



 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
 Frame = -2

Query: 527 SEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYASLLQTCIKAHSFNHGLQIHSHVIKS 348
           S I    ++G    +++L     ++ +       +++++ C +      G   H  V+  
Sbjct: 190 SMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGR 249

Query: 347 GLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERDVISWTSMISGYGMNGQGRDAVAL 168
           G + +  + ++L+ M+ +      + R++FD L E D I WTS+IS    N    +A+  
Sbjct: 250 GFDSNYVIASALIDMHGR-NCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRF 308

Query: 167 FSEML-DSGLIPDQIAFVSVLSACSHSGLLDEGR 69
           F  M  D G+ PD   F +VL+AC + G L +G+
Sbjct: 309 FYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGK 342


>ref|XP_007216136.1| hypothetical protein PRUPE_ppa019108mg, partial [Prunus persica]
           gi|462412286|gb|EMJ17335.1| hypothetical protein
           PRUPE_ppa019108mg, partial [Prunus persica]
          Length = 608

 Score =  186 bits (471), Expect = 1e-44
 Identities = 99/183 (54%), Positives = 132/183 (72%), Gaps = 5/183 (2%)
 Frame = -2

Query: 578 RRHYTSL----IENYTNPSP-QSEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYASLL 414
           +RH +SL    +++   PSP QS+IL L KLG LS A+++LNS DS +I++KP++YASLL
Sbjct: 6   KRHCSSLTSLNLQSTKIPSPKQSQILRLCKLGLLSDAIRVLNSIDSGEITLKPILYASLL 65

Query: 413 QTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERDV 234
           QTC KA SFNHGLQIH+HV+KSGLE DRFVGNSLLS+YFKL     ETR+VFD LF +DV
Sbjct: 66  QTCTKAVSFNHGLQIHAHVVKSGLETDRFVGNSLLSLYFKLVPNMSETRRVFDGLFVKDV 125

Query: 233 ISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGRYYFRL 54
           ISWTSMI+GY   G+  +++ +F +ML  G+ P+     +V+ ACS  G L  G  +  +
Sbjct: 126 ISWTSMITGYVRAGKPGNSIEVFYDMLKFGIEPNAFTLSAVVKACSEIGDLRLGLCFHGV 185

Query: 53  MTR 45
           + R
Sbjct: 186 VVR 188



 Score =  113 bits (282), Expect = 1e-22
 Identities = 55/141 (39%), Positives = 87/141 (61%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L+ C    +   G ++H   ++     D  V ++L+ +Y K G   F  R+VF  +
Sbjct: 362 FGTVLRACAGLAAVQQGKEVHCQYVRRCGWRDVIVESALVHLYAKCGCIDF-ARRVFTQM 420

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             R++I+W SMI G+  NG G +A+ +F  M+  G+ PD I+F+ VL ACSH+GL+D+GR
Sbjct: 421 PVRNLITWNSMICGFAQNGGGAEALRIFDRMIKEGVKPDYISFIGVLFACSHAGLVDQGR 480

Query: 68  YYFRLMTRDYTMVPRIEHYAC 6
            YF LMT++Y + P IEHY C
Sbjct: 481 NYFILMTKEYGIKPGIEHYCC 501



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
 Frame = -2

Query: 461 DSHKISIKPVIY--ASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLG 288
           D  K  I+P  +  +++++ C +      GL  H  V++ G   +  + ++L++MY +  
Sbjct: 150 DMLKFGIEPNAFTLSAVVKACSEIGDLRLGLCFHGVVVRRGFVSNHVIISALINMYGR-N 208

Query: 287 HGFFETRKVFDNLFERDVISWTSMISGYGMNGQGRDAVALFSEM-LDSGLIPDQIAFVSV 111
           +   + R +FD L E   I WTS+IS    +    +A+  F  M    GL PD   F +V
Sbjct: 209 YRSEDARLLFDELTEPGAICWTSIISALTRSDLFEEALGFFYLMHRYHGLSPDGFTFGTV 268

Query: 110 LSACSHSGLLDEGR 69
           L+AC + G L +GR
Sbjct: 269 LAACGNLGRLRQGR 282


>ref|XP_008356170.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Malus domestica]
          Length = 652

 Score =  185 bits (470), Expect = 2e-44
 Identities = 98/184 (53%), Positives = 131/184 (71%), Gaps = 5/184 (2%)
 Frame = -2

Query: 581 YRRHYTSL----IENYTNPSP-QSEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYASL 417
           ++RH +SL    ++N   PSP QS+IL L KLG L  A+++LNS DS +I++KP++YASL
Sbjct: 29  FKRHCSSLTSXNLQNTKTPSPKQSKILQLCKLGLLPDAIRVLNSIDSGEITLKPILYASL 88

Query: 416 LQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERD 237
           LQTC KA SFNHGLQ+H+HV+KSGLE DRFVGNSLL++YFKL     ETR+VFD LF +D
Sbjct: 89  LQTCTKAVSFNHGLQVHAHVVKSGLETDRFVGNSLLALYFKLVPNMSETRRVFDGLFVKD 148

Query: 236 VISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGRYYFR 57
           VISWTSMI+GY   G+  +++  F EML  G+ P+     +V+ ACS  G L  G  +  
Sbjct: 149 VISWTSMITGYVRAGKPGNSIETFWEMLKFGIEPNAFTLSAVVKACSEIGDLRLGLCFHG 208

Query: 56  LMTR 45
           ++ R
Sbjct: 209 VVFR 212



 Score =  119 bits (299), Expect = 1e-24
 Identities = 57/142 (40%), Positives = 91/142 (64%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L+ C    +  HG ++H   ++     D  V ++L+++Y K G+  F  R+VF  +
Sbjct: 386 FGTVLRACAGLAAVQHGKEVHCQYVRRCGWRDVIVESALVNLYAKCGNIDF-ARRVFVKM 444

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             R++I+W SMI G+  NG G +A+ +F EM++ G+ PD I+F+ VL ACSH+GL+D+GR
Sbjct: 445 PVRNLITWNSMICGFAQNGGGEEALKIFDEMINEGIKPDYISFIGVLFACSHAGLVDQGR 504

Query: 68  YYFRLMTRDYTMVPRIEHYACM 3
             F  MT+DY + P IEHY CM
Sbjct: 505 SNFIAMTKDYRIKPGIEHYCCM 526



 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
 Frame = -2

Query: 452 KISIKPVIY--ASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGF 279
           K  I+P  +  +++++ C +      GL  H  V + G + +  + ++L+ MY +     
Sbjct: 177 KFGIEPNAFTLSAVVKACSEIGDLRLGLCFHGVVFRRGFDSNDVIVSALIYMYGRNCRSE 236

Query: 278 FETRKVFDNLFERDVISWTSMISGYGMNGQGRDAVALFSEM-LDSGLIPDQIAFVSVLSA 102
            + R++FD + E   I WTS+IS +  +    +A+  F  M  + GL PD   F +VL+A
Sbjct: 237 -DARRLFDEMSEPGPICWTSVISAFTRSDLFEEALGFFYLMQRNHGLSPDGFTFGTVLTA 295

Query: 101 CSHSGLLDEGR 69
           C + G L +GR
Sbjct: 296 CGNLGRLRQGR 306


>ref|XP_009357088.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Pyrus x bretschneideri]
          Length = 628

 Score =  184 bits (466), Expect = 4e-44
 Identities = 97/184 (52%), Positives = 131/184 (71%), Gaps = 5/184 (2%)
 Frame = -2

Query: 581 YRRHYTSL----IENYTNPSP-QSEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYASL 417
           ++RH +SL    ++N   PS  QS+IL L KLG LS A+++LNS DS +I++KP++YASL
Sbjct: 5   FKRHCSSLTSFNLQNTKTPSSKQSKILQLCKLGLLSDAIRVLNSIDSGEITLKPILYASL 64

Query: 416 LQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERD 237
           LQTC K  SFNHGLQ+H+HV+KSGLE DRFVGNSLL++YFKL     ETR+VFD LF +D
Sbjct: 65  LQTCTKVVSFNHGLQVHAHVVKSGLETDRFVGNSLLALYFKLVPNMSETRRVFDGLFVKD 124

Query: 236 VISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGRYYFR 57
           VISWTSMI+GY   G+  +++ +F EML  G+ P+     +V+ ACS  G L  G  +  
Sbjct: 125 VISWTSMITGYVRAGKPGNSIEMFWEMLKFGIEPNAFTLSAVVKACSEVGDLRLGLCFHG 184

Query: 56  LMTR 45
           ++ R
Sbjct: 185 VVFR 188



 Score =  119 bits (299), Expect = 1e-24
 Identities = 57/142 (40%), Positives = 92/142 (64%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L+ C    +  HG ++H   ++S    D  V ++L+++Y K G+  F  R+VF  +
Sbjct: 362 FGTVLRACAGLAAVQHGKEVHCQYVRSCGWRDVIVESALVNLYAKCGNIDF-ARRVFVKM 420

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             R++I+W SMI G+  NG G +A+ +F EM++ G+ PD I+F+ VL ACSH+GL+D+GR
Sbjct: 421 PVRNLITWNSMICGFAQNGGGEEALKIFDEMINDGIRPDYISFIGVLFACSHAGLVDQGR 480

Query: 68  YYFRLMTRDYTMVPRIEHYACM 3
             F  MT++Y + P IEHY CM
Sbjct: 481 SNFIAMTKEYGIKPGIEHYCCM 502



 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
 Frame = -2

Query: 452 KISIKPVIY--ASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGF 279
           K  I+P  +  +++++ C +      GL  H  V + G + +  + ++L+ MY +  +  
Sbjct: 153 KFGIEPNAFTLSAVVKACSEVGDLRLGLCFHGVVFRRGFDSNDVIVSALIYMYGR-NYRS 211

Query: 278 FETRKVFDNLFERDVISWTSMISGYGMNGQGRDAVALFSEM-LDSGLIPDQIAFVSVLSA 102
            + R++FD + E   I WTS+IS +  +    +A+  F  M  + GL PD   F +VL+A
Sbjct: 212 EDARRLFDEMSEPGAICWTSVISAFTRSDLFEEALGFFYLMQRNHGLSPDGFTFGTVLTA 271

Query: 101 CSHSGLLDEGR 69
           C + G L +GR
Sbjct: 272 CGNLGRLRQGR 282



 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 36/130 (27%), Positives = 64/130 (49%)
 Frame = -2

Query: 458 SHKISIKPVIYASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGF 279
           +H +S     + ++L  C        G ++H+ VI  GL  +  V +SL+ MY K G   
Sbjct: 255 NHGLSPDGFTFGTVLTACGNLGRLRQGREVHAKVITYGLYGNVVVESSLVDMYGKCG-SV 313

Query: 278 FETRKVFDNLFERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSAC 99
              R+VFD + +++ +SW++++  Y   G     V  F EM ++    D  +F +VL AC
Sbjct: 314 ENARRVFDRMSKKNSVSWSALLGVYCQAGDFESVVKHFREMEET----DLYSFGTVLRAC 369

Query: 98  SHSGLLDEGR 69
           +    +  G+
Sbjct: 370 AGLAAVQHGK 379


>ref|XP_010556824.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           isoform X1 [Tarenaya hassleriana]
           gi|729414754|ref|XP_010556825.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03540
           isoform X2 [Tarenaya hassleriana]
          Length = 604

 Score =  181 bits (458), Expect = 4e-43
 Identities = 92/173 (53%), Positives = 126/173 (72%), Gaps = 1/173 (0%)
 Frame = -2

Query: 578 RRHYTSLI-ENYTNPSPQSEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYASLLQTCI 402
           +RHY++LI + +++P+ Q+ IL   K G L++A+++LNSTDS++IS KP +YASLLQTC 
Sbjct: 6   KRHYSNLILKPHSSPTKQARILEFCKSGLLTEAIRVLNSTDSNEISPKPNLYASLLQTCT 65

Query: 401 KAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERDVISWT 222
           K  SF HGLQIH+HV+KSGLE DRFVGNSLL++YFKLG    +TR+VFD +F +D ISW+
Sbjct: 66  KVSSFGHGLQIHAHVVKSGLETDRFVGNSLLALYFKLGPDSTDTRRVFDGMFFKDAISWS 125

Query: 221 SMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGRYY 63
           SM+S Y   G+   A+  F EMLD GL P+     S + ACS +G +  GR +
Sbjct: 126 SMVSRYVKCGEHAKALETFVEMLDFGLEPNAYTLSSAVVACSETGDVRLGRCF 178



 Score =  110 bits (274), Expect = 8e-22
 Identities = 55/142 (38%), Positives = 83/142 (58%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L+ C    +  HG ++H   I+ G   +  V ++L+ +Y K G   F  R VF  +
Sbjct: 359 FGTVLRACAGLAAVRHGKEVHCQYIRRGGYKNVIVESALVDVYAKSGCDDFALR-VFSKM 417

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             R++I+W +M+ G   NG+G +AV  F  M+  G+ PD I+FV VLSAC H+GL++EGR
Sbjct: 418 SVRNLITWNTMLDGLSKNGRGEEAVMFFEVMVKEGIEPDYISFVGVLSACKHTGLVEEGR 477

Query: 68  YYFRLMTRDYTMVPRIEHYACM 3
            YF LM   Y + P  E Y CM
Sbjct: 478 KYFALMADKYRIKPTAEIYGCM 499



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFV-GNSLLSMYFKLGHGFFETRKVFDN 252
           + +LL  C        G +IH  V  SG+     V  +SLL MY K G    E R+VFD 
Sbjct: 261 FGTLLMACGNLGRIRQGREIHGKVTTSGMLCGNVVVQSSLLDMYGKCGF-VKEARRVFDG 319

Query: 251 LFERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEG 72
           + E++ +SW++++ GY  NG+ R  + +F EM +     D   F +VL AC+    +  G
Sbjct: 320 MSEKNSVSWSALLGGYCQNGEHRMVIEMFREMEEK----DLYCFGTVLRACAGLAAVRHG 375

Query: 71  R 69
           +
Sbjct: 376 K 376



 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
 Frame = -2

Query: 425 ASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLF 246
           +S +  C +      G   H  V+  G E++  + +SL  MY   G    + R+VFD + 
Sbjct: 160 SSAVVACSETGDVRLGRCFHGIVVTRGFEWNHVISSSLAVMYGGNGEPR-DARRVFDEMP 218

Query: 245 ERDVISWTSMISGYGMNGQGRDAVALFSEM-LDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
           E D I WTS++S Y  N    +AV  F  M    GL PD   F ++L AC + G + +GR
Sbjct: 219 EPDAICWTSVVSSYTKNDMYEEAVEFFYVMHRRKGLAPDGYTFGTLLMACGNLGRIRQGR 278


>ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542954|gb|EEF44490.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score =  180 bits (456), Expect = 6e-43
 Identities = 93/173 (53%), Positives = 123/173 (71%)
 Frame = -2

Query: 581 YRRHYTSLIENYTNPSPQSEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYASLLQTCI 402
           ++RH +SL  ++   + + +I+   K G+L  A+ +LNS DS +IS KP IYASLLQTC 
Sbjct: 4   FKRHCSSL-PSFNLKNKEIKIIGFCKSGALLHALDILNSIDSREISNKPFIYASLLQTCT 62

Query: 401 KAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERDVISWT 222
           K  SFNHGLQIH+HV+KSGLE DRFVGNSLL++YFKL   FFETR+VFD L+ RDVISWT
Sbjct: 63  KVVSFNHGLQIHAHVVKSGLETDRFVGNSLLALYFKLSTDFFETRRVFDGLYFRDVISWT 122

Query: 221 SMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGRYY 63
           SMI+GY    + + A+ LF EMLD G+ P+     +V+ AC+  G L  G+ +
Sbjct: 123 SMITGYVKGEKPKKALDLFWEMLDVGVDPNAFTLSAVIKACTDLGTLMLGKCF 175



 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 37/113 (32%), Positives = 63/113 (55%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L+ C    +   G ++H   ++ G   D  + ++L+ +Y K G   F  R +F  +
Sbjct: 356 FGTVLRACAGLAAVRQGKEVHCQYVRRGGWRDVIIESALVDLYAKCGCIDFAHR-IFTKM 414

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHS 90
             R++I+W SMI G+  NG   +A+ +F EM+  G  PD I F+ VL ACSH+
Sbjct: 415 TVRNLITWNSMICGFAQNGWAEEALRIFDEMVKEGTKPDYITFIGVLFACSHT 467



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 34/120 (28%), Positives = 64/120 (53%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L  C        G ++H+ +I SG   +  V +SL+ MY K G    E+++VFD +
Sbjct: 258 FGTVLTACGNLRRLKQGKEVHAKLITSGFSGNVVVESSLVDMYGKCGL-VDESQRVFDRM 316

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             ++ +SW++++ G+  NG     + +F EM   G   D  +F +VL AC+    + +G+
Sbjct: 317 SVKNSVSWSALLGGFCQNGDFESVIRIFREM---GEADDLYSFGTVLRACAGLAAVRQGK 373



 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
 Frame = -2

Query: 425 ASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLF 246
           +++++ C    +   G   H  ++  G   +  +G++L+ +Y +  +   + R++FD L 
Sbjct: 157 SAVIKACTDLGTLMLGKCFHCVIMIRGFHSNHVIGSALIDLYGR-NYELDDARRLFDELL 215

Query: 245 ERDVISWTSMISGYGMNGQGRDAVALFSEMLDS-GLIPDQIAFVSVLSACSHSGLLDEGR 69
           E D I WTS+IS Y  N     A+  F  M    GL PD   F +VL+AC +   L +G+
Sbjct: 216 EPDAICWTSVISAYTRNDMYDKALGFFYLMQRKLGLAPDGFTFGTVLTACGNLRRLKQGK 275

Query: 68  -YYFRLMTRDYT 36
             + +L+T  ++
Sbjct: 276 EVHAKLITSGFS 287


>ref|XP_012088342.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Jatropha curcas] gi|643709770|gb|KDP24179.1|
           hypothetical protein JCGZ_25836 [Jatropha curcas]
          Length = 604

 Score =  179 bits (454), Expect = 1e-42
 Identities = 95/183 (51%), Positives = 130/183 (71%), Gaps = 5/183 (2%)
 Frame = -2

Query: 602 MKLSYIPYRRHYTSL--IENYTNPSPQSE---ILNLSKLGSLSQAVQLLNSTDSHKISIK 438
           MKL ++  +RH +SL  + + T+ +PQ++   I+   K G+L  A+ +LNS DS K+  K
Sbjct: 1   MKL-FLSIKRHCSSLASLNHNTSQNPQTKEFRIIQYCKSGALFDALHILNSLDSAKLCNK 59

Query: 437 PVIYASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVF 258
           P +YASLLQTC K  SFNHGLQIH+H+IKSGLE DRF+GNSLL++YFKLG  FFETR++F
Sbjct: 60  PFLYASLLQTCTKVVSFNHGLQIHAHLIKSGLETDRFIGNSLLALYFKLGSNFFETRRLF 119

Query: 257 DNLFERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLD 78
           D L+ RDVISWTSM++GY   G+ ++A+ LF EMLD G+ P+     + + A S  G L 
Sbjct: 120 DGLYFRDVISWTSMVTGYIKVGKPKNAIELFLEMLDFGIDPNGFTLSAAIKASSDLGNLR 179

Query: 77  EGR 69
            G+
Sbjct: 180 LGK 182



 Score =  121 bits (304), Expect = 3e-25
 Identities = 58/166 (34%), Positives = 98/166 (59%)
 Frame = -2

Query: 500 GSLSQAVQLLNSTDSHKISIKPVIYASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVG 321
           G     +++    +SH +      + ++L+ C    +   G ++H   ++ G   D  V 
Sbjct: 344 GDFESVIRIFREVESHDL----YSFGTVLRACSGLAAIRQGKEVHGQYVRRGGWRDVIVE 399

Query: 320 NSLLSMYFKLGHGFFETRKVFDNLFERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGL 141
           ++L+ +Y K G   F  R +F  +  R++I+W SMI G+  NG+G +A+ +F+EML  G+
Sbjct: 400 SALVDLYAKCGCIDFAHR-IFSKMSVRNLITWNSMIYGFAQNGRGEEALRIFNEMLGEGI 458

Query: 140 IPDQIAFVSVLSACSHSGLLDEGRYYFRLMTRDYTMVPRIEHYACM 3
            PD I+++ VL ACSH+GL+D+GR +F  MT++Y + P IEHY CM
Sbjct: 459 KPDYISYIGVLFACSHTGLVDQGRKFFMSMTKEYEIKPGIEHYNCM 504



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
 Frame = -2

Query: 527 SEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYASLLQTCIKAHSFNHGLQIHSHVIKS 348
           S +    K+G    A++L        I       ++ ++      +   G  IH  VI  
Sbjct: 132 SMVTGYIKVGKPKNAIELFLEMLDFGIDPNGFTLSAAIKASSDLGNLRLGKCIHGVVISQ 191

Query: 347 GLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERDVISWTSMISGYGMNGQGRDAVAL 168
           G + +  + ++L+ MY +  +G  +  ++FD+L E D ISWTS+IS +  N     A+  
Sbjct: 192 GFDSNYVISSALIDMYGR-NYGLEDACRLFDDLLEPDAISWTSVISAFTRNDMYDKALGF 250

Query: 167 FSEMLDS-GLIPDQIAFVSVLSACSHSGLLDEGR-YYFRLMTRDYT 36
           F  M    GL PD+  F +VL+AC +   L  G+  + R++T  ++
Sbjct: 251 FYLMQRKLGLAPDEFTFGTVLTACGNLRRLKRGKEVHARVITSGFS 296



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 35/120 (29%), Positives = 62/120 (51%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L  C        G ++H+ VI SG   +  V +SL+ MY K G    E++ VFD +
Sbjct: 267 FGTVLTACGNLRRLKRGKEVHARVITSGFSGNVVVESSLVDMYGKCGL-VMESQHVFDRM 325

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             ++ +SW++++ GY  NG     + +F E+       D  +F +VL ACS    + +G+
Sbjct: 326 SIKNSVSWSALLGGYCQNGDFESVIRIFREVESH----DLYSFGTVLRACSGLAAIRQGK 381


>ref|XP_004306008.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Fragaria vesca subsp. vesca]
          Length = 658

 Score =  179 bits (454), Expect = 1e-42
 Identities = 99/183 (54%), Positives = 128/183 (69%), Gaps = 5/183 (2%)
 Frame = -2

Query: 602 MKLSYIPYRRHYTSLIENYT----NPSP-QSEILNLSKLGSLSQAVQLLNSTDSHKISIK 438
           MKL +  ++R+YTSL+ +      NP P QS+IL L K G L  A+ LLNST+  K+++K
Sbjct: 1   MKLFFF-FKRYYTSLLPSNLPKPQNPPPKQSQILRLCKSGLLLDAIHLLNSTNPSKLTLK 59

Query: 437 PVIYASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVF 258
           P++YASLLQTC KA S  HGLQIHSHVIK+GLE DRFVGNSLLS+YFKL     +T+KVF
Sbjct: 60  PLLYASLLQTCTKAVSLTHGLQIHSHVIKTGLETDRFVGNSLLSLYFKLIPNMTQTQKVF 119

Query: 257 DNLFERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLD 78
           D L+ +DVISWTSMI+GY   G+   +V LF EM+  G+ P+     +V+ ACS  G + 
Sbjct: 120 DALYFKDVISWTSMITGYVRAGKPATSVELFWEMVRFGIEPNDFTVSAVVKACSQLGRVS 179

Query: 77  EGR 69
            GR
Sbjct: 180 LGR 182



 Score =  118 bits (295), Expect = 3e-24
 Identities = 57/142 (40%), Positives = 89/142 (62%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L+ C    +  HG ++H   ++     D  V ++L+++Y K G   F +  VF  +
Sbjct: 364 FGTVLRACAGLAAVQHGKEVHCQYVRRCGWRDVIVESALVNLYAKCGCIDFAS-SVFAQM 422

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             R++I+W SMI G+  NGQG +A+ +F EM+  G+ PD I+F+ VL ACSH+GL+D+GR
Sbjct: 423 LVRNLITWNSMICGFAQNGQGEEALKIFDEMIKEGMKPDYISFIGVLFACSHAGLVDQGR 482

Query: 68  YYFRLMTRDYTMVPRIEHYACM 3
             F LMT+ Y + P IEHY CM
Sbjct: 483 KNFILMTKKYGIKPGIEHYCCM 504


>ref|XP_006366001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Solanum tuberosum]
          Length = 597

 Score =  177 bits (450), Expect = 3e-42
 Identities = 86/168 (51%), Positives = 123/168 (73%)
 Frame = -2

Query: 575 RHYTSLIENYTNPSPQSEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYASLLQTCIKA 396
           RHY+S+      PS +SEI++L + G LSQA++LL +T+  KIS KP++YA+L+QTC K+
Sbjct: 9   RHYSSVTFFTNPPSKESEIIHLCRSGLLSQAIKLLKTTE--KISSKPIVYATLIQTCTKS 66

Query: 395 HSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERDVISWTSM 216
           HSFNHG+Q H+HVIK+GLE DRFVGNSLL++YFKLG  F ETR+ F+ +  +DV++W+SM
Sbjct: 67  HSFNHGVQFHTHVIKTGLETDRFVGNSLLALYFKLGSKFLETRRFFEGMVYKDVVAWSSM 126

Query: 215 ISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEG 72
           I+GY   G+ + ++ L+ EM+D G  P+     +V+ ACS  G L  G
Sbjct: 127 ITGYVRIGKPKISLELYGEMIDLGFEPNGFTLSAVIKACSEIGKLKLG 174



 Score =  115 bits (287), Expect = 3e-23
 Identities = 53/142 (37%), Positives = 88/142 (61%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L+ C    +   G ++H   ++ G   D  V ++L+ +Y K G   +    +F  +
Sbjct: 357 FGTVLRACAGLAALKSGKEVHCQYLRRGGWSDVIVESALVDLYAKCGFDNY-AYVIFRQM 415

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             R+ ++W SMISG+  NG+G +A+A+F EM+  G+ PD I+F++VL ACSHSG++DEGR
Sbjct: 416 NVRNSVTWNSMISGFAQNGKGAEAIAVFEEMISEGVKPDYISFIAVLFACSHSGMVDEGR 475

Query: 68  YYFRLMTRDYTMVPRIEHYACM 3
            Y+  M  +Y +   IEHY+CM
Sbjct: 476 KYYLSMINEYGIKAHIEHYSCM 497



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
 Frame = -2

Query: 425 ASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLF 246
           +++++ C +      G   H  VI  G E +  + ++L+ MY K  +   +  K+FD L 
Sbjct: 159 SAVIKACSEIGKLKLGSGFHGVVISRGFEENNVIVSALIDMYGK-NYASGDALKLFDELP 217

Query: 245 ERDVISWTSMISGYGMNGQGRDAVALFSEM-LDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
           E D + WTS+IS    N    +A+  F  M   +GL PD   F SVL+A  +SG   +GR
Sbjct: 218 EPDAVCWTSVISALTRNELHEEALGFFYTMHRKNGLAPDLFTFGSVLTALGNSGRTRQGR 277


>ref|XP_004248468.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g03540 [Solanum lycopersicum]
          Length = 729

 Score =  177 bits (449), Expect = 4e-42
 Identities = 86/168 (51%), Positives = 122/168 (72%)
 Frame = -2

Query: 575 RHYTSLIENYTNPSPQSEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYASLLQTCIKA 396
           RHY+S+      PS +SEI++L +   LSQA++LL ST+  KIS KP++YA+L+QTC K+
Sbjct: 9   RHYSSVTFFTNPPSKESEIIHLCRSDLLSQAIKLLKSTE--KISSKPIVYATLIQTCTKS 66

Query: 395 HSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERDVISWTSM 216
           HSFNHG+Q H+HVIK+G+E DRFVGNSLL++YFKLG  F ETR+ FD +  +DV++W+SM
Sbjct: 67  HSFNHGVQFHTHVIKTGIETDRFVGNSLLALYFKLGSNFLETRRFFDGMVYKDVVAWSSM 126

Query: 215 ISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEG 72
           I+GY   G+ + ++ L+ EM+D G  P+     +V+ ACS  G L  G
Sbjct: 127 ITGYVRIGKPKISLELYGEMIDLGFEPNGFTLSAVIKACSDIGKLKLG 174



 Score =  114 bits (284), Expect = 6e-23
 Identities = 52/142 (36%), Positives = 88/142 (61%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L+ C    +   G ++H   ++ G   D  V ++L+ +Y K G   +    +F  +
Sbjct: 357 FGTVLRACAGLAALKSGKEVHCQYLRRGGWSDVIVESALVDLYAKCGFDNY-AYVIFRQM 415

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             R+ ++W SMISG+  NG+G +A+A+F EM+  G+ PD I+F++VL ACSH+G++DEGR
Sbjct: 416 NVRNSVTWNSMISGFAQNGKGAEAIAVFKEMISEGVKPDYISFIAVLFACSHNGMVDEGR 475

Query: 68  YYFRLMTRDYTMVPRIEHYACM 3
            Y+  M  +Y +   IEHY+CM
Sbjct: 476 KYYLSMINEYGIKAHIEHYSCM 497



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
 Frame = -2

Query: 425 ASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLF 246
           +++++ C        G   H  VI  G E +  + ++L+ MY K  +   +  K+FD L 
Sbjct: 159 SAVIKACSDIGKLKLGSGFHGVVISRGFEENNVIVSALIDMYGK-NYASGDALKLFDELP 217

Query: 245 ERDVISWTSMISGYGMNGQGRDAVALFSEM-LDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
           E D + WTS+IS    N    +A+  F  M   +GL PD   F SVL+A  +SG   +GR
Sbjct: 218 EPDAVCWTSVISSLTRNELHEEALGFFYTMHRKNGLAPDLFTFGSVLTALGNSGRTRQGR 277


>ref|XP_009782593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Nicotiana sylvestris]
          Length = 597

 Score =  176 bits (445), Expect = 1e-41
 Identities = 88/181 (48%), Positives = 128/181 (70%), Gaps = 1/181 (0%)
 Frame = -2

Query: 578 RRHYTSLIENYTNPSPQSEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYASLLQTCIK 399
           +RHY+S+      PS +SEI+ L + G LSQA+ LL++ +  KIS KP++YA+L+Q C K
Sbjct: 8   QRHYSSVTSLTNPPSKESEIIQLCRSGLLSQALNLLSTIN--KISSKPILYATLIQACTK 65

Query: 398 AHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERDVISWTS 219
           AHSFNHGLQ H+HVIK+G+E DRFVGNSLL++YFKLG  F ETR+ FD +  +DV++W+S
Sbjct: 66  AHSFNHGLQFHAHVIKTGIENDRFVGNSLLALYFKLGPTFSETRRFFDGMLYKDVVAWSS 125

Query: 218 MISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR-YYFRLMTRD 42
           MI+GY   G+   ++ L+ EM+  G  P+     +V+ ACS  G+L  GR ++  ++TR 
Sbjct: 126 MITGYVQLGKPNVSLKLYGEMIGLGFEPNGFTLSAVIKACSEIGILKLGRGFHGVVITRG 185

Query: 41  Y 39
           +
Sbjct: 186 F 186



 Score =  117 bits (292), Expect = 7e-24
 Identities = 54/142 (38%), Positives = 88/142 (61%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L+ C    +   G ++H   ++ G   D  V ++L+ +Y K G   +    +F  +
Sbjct: 357 FGTVLRACAGLVALKSGKEVHCQYLRRGGGSDVIVESALVDLYAKCGFDNY-AYVIFCQM 415

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             R+ ++W SMISG+  NG+G +A+A+F EM+  G+ PD I+F+ VL ACSHSG++DEGR
Sbjct: 416 KVRNSVTWNSMISGFAQNGKGAEAIAVFEEMISEGVKPDYISFIGVLFACSHSGMVDEGR 475

Query: 68  YYFRLMTRDYTMVPRIEHYACM 3
            YF  M  +Y + P IEH++CM
Sbjct: 476 KYFLSMINEYGIKPHIEHFSCM 497


>ref|XP_009602573.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g03540 [Nicotiana tomentosiformis]
          Length = 607

 Score =  176 bits (445), Expect = 1e-41
 Identities = 87/171 (50%), Positives = 120/171 (70%), Gaps = 1/171 (0%)
 Frame = -2

Query: 578 RRHYTSLIENYTNPSPQSEILNLSKLGSLSQAVQLLNSTDS-HKISIKPVIYASLLQTCI 402
           +RHY+S+      PS +SE + L + G LSQA+ LLN+  S ++IS KP++YA+L+Q C 
Sbjct: 8   QRHYSSITSLTNPPSKESETIQLCRSGLLSQALNLLNTISSANRISSKPILYATLIQACT 67

Query: 401 KAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERDVISWT 222
           KAHSFNHGLQ H HVIK+GLE DRFVGNSLL++YFKLG  F +TR+ FD +  +DV++W+
Sbjct: 68  KAHSFNHGLQFHCHVIKTGLENDRFVGNSLLALYFKLGPTFADTRRFFDGMLYKDVVAWS 127

Query: 221 SMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
           SMI+GY   G+   ++ L+ EM+  G  P+     +V+ ACS  GLL  GR
Sbjct: 128 SMITGYVKIGKPNVSLKLYGEMIGLGFEPNGFTLSAVIKACSEIGLLKLGR 178



 Score =  115 bits (287), Expect = 3e-23
 Identities = 54/142 (38%), Positives = 87/142 (61%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L+ C    +   G ++H   I+ G   D  V ++L+ +Y K G   +    +F  +
Sbjct: 360 FGTVLRACAGLAALKSGKEVHCQYIRRGGWSDVIVESALVDLYAKCGFDSY-AYVIFRQM 418

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
              + ++W SMISG+  NG+G +A+A+F EM+   + PD I+F++VL ACSHSG++DEGR
Sbjct: 419 KVTNSVTWNSMISGFAQNGKGTEAIAVFEEMISEEVKPDYISFIAVLFACSHSGMVDEGR 478

Query: 68  YYFRLMTRDYTMVPRIEHYACM 3
            YF  M  +Y + P IEHY+CM
Sbjct: 479 KYFLSMINEYGIKPHIEHYSCM 500


>ref|XP_010261461.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142 [Nelumbo nucifera]
          Length = 680

 Score =  174 bits (442), Expect = 3e-41
 Identities = 88/163 (53%), Positives = 116/163 (71%)
 Frame = -2

Query: 491 SQAVQLLNSTDSHKISIKPVIYASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSL 312
           ++AV+L +  +   +    V  AS+L  C    +   G +IH +V++  L  + F+ N+L
Sbjct: 290 AEAVELFSQMERSGMEPDAVTIASVLPACGDLSALGQGRRIHDYVVRKRLTPNLFLENAL 349

Query: 311 LSMYFKLGHGFFETRKVFDNLFERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPD 132
           + MY K G    + R+VFD +  RDV+SWTSMIS YGM+GQGRDAVALF++M  SGL PD
Sbjct: 350 VDMYAKCGC-LQDAREVFDGMQGRDVVSWTSMISAYGMHGQGRDAVALFTKMQHSGLTPD 408

Query: 131 QIAFVSVLSACSHSGLLDEGRYYFRLMTRDYTMVPRIEHYACM 3
            IAFVSVLSACSH+GLLDEGRYYFRLMT +Y +VPRIEH++CM
Sbjct: 409 HIAFVSVLSACSHTGLLDEGRYYFRLMTEEYMLVPRIEHFSCM 451



 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 42/132 (31%), Positives = 69/132 (52%)
 Frame = -2

Query: 485 AVQLLNSTDSHKISIKPVIYASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLS 306
           A+ +  +  SH +         +L+ C  +       QIH+  +K  L+ + FVGN L+ 
Sbjct: 123 ALLIYINMSSHGVQPDNYTIPCVLKACSCSEDLRLRGQIHATSVKLALDLNLFVGNGLIF 182

Query: 305 MYFKLGHGFFETRKVFDNLFERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQI 126
           MY K G+   E R++ D +  RDV+SW SM++GY  NG+  +A+ +  E+    L PD  
Sbjct: 183 MYGK-GNCLIEARRILDGMRHRDVVSWNSMVAGYAQNGRFDEALEVCKEIELHRLKPDAG 241

Query: 125 AFVSVLSACSHS 90
              S+L A +H+
Sbjct: 242 TMASLLPAVTHT 253


>ref|XP_010095814.1| hypothetical protein L484_022170 [Morus notabilis]
           gi|587873080|gb|EXB62282.1| hypothetical protein
           L484_022170 [Morus notabilis]
          Length = 633

 Score =  171 bits (434), Expect = 2e-40
 Identities = 91/185 (49%), Positives = 125/185 (67%), Gaps = 6/185 (3%)
 Frame = -2

Query: 581 YRRHY-----TSLIENYTNPS-PQSEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYAS 420
           ++RH+     +S + N  N S  +S+I  L K G+LS A  +LNS D  +I++KP +YAS
Sbjct: 5   FKRHHCSSLSSSNLHNTKNQSHKESQIRQLCKFGALSDAFSVLNSIDPGEITVKPTLYAS 64

Query: 419 LLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFER 240
           LLQTC+KA SF  GLQIH+HV+KSGLE DRFVGNSLL++YFKLG    +TR+VFDNL  +
Sbjct: 65  LLQTCVKAVSFKPGLQIHAHVVKSGLETDRFVGNSLLALYFKLGSDISQTRRVFDNLNFK 124

Query: 239 DVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGRYYF 60
           DVISWTSM+SGY   G+  + ++LF EM   G+ P+     +V+ ACS    L  GR + 
Sbjct: 125 DVISWTSMVSGYVKVGKPENGISLFREMYGFGVEPNGFTLSAVIKACSEIPDLRLGRCFH 184

Query: 59  RLMTR 45
            ++ +
Sbjct: 185 TMVVK 189



 Score =  111 bits (277), Expect = 4e-22
 Identities = 53/142 (37%), Positives = 87/142 (61%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++++ C    +  HG ++H   ++ G   +  V ++L+ +Y K G   F  R VF  +
Sbjct: 363 FGTVIRACAGLAAARHGKEVHCQYVRKGSSRNVIVESALVDLYAKCGCINFAER-VFCRM 421

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             R++I+W SMI G+  NG+G +A+ +F +M+  G+ PD I+FV VL ACSHSGL++ GR
Sbjct: 422 PVRNLITWNSMICGFAQNGRGGEAIGVFDQMIKEGIKPDYISFVGVLFACSHSGLVERGR 481

Query: 68  YYFRLMTRDYTMVPRIEHYACM 3
            +F+ MT +Y +    EHY CM
Sbjct: 482 NFFKSMTAEYGIKAGHEHYNCM 503



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 1/147 (0%)
 Frame = -2

Query: 506 KLGSLSQAVQLLNSTDSHKISIKPVIYASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRF 327
           K+G     + L        +       +++++ C +      G   H+ V+K G + +  
Sbjct: 138 KVGKPENGISLFREMYGFGVEPNGFTLSAVIKACSEIPDLRLGRCFHTMVVKCGFDSNHV 197

Query: 326 VGNSLLSMYFKLGHGFFETRKVFDNLFERDVISWTSMISGYGMNGQGRDAVALFSEM-LD 150
           + +SL+ MY +  +   +  K+FD + + D I WTS+IS    N     A+ LF  M   
Sbjct: 198 IVSSLIDMYGR-NNVPEDACKLFDEMIDPDAICWTSVISAMTRNDSFVKALGLFYSMQRK 256

Query: 149 SGLIPDQIAFVSVLSACSHSGLLDEGR 69
           +G   D   F +VL+AC + G L +G+
Sbjct: 257 AGFFADGYTFGTVLTACGNLGRLRQGK 283


>ref|XP_006404782.1| hypothetical protein EUTSA_v10000094mg [Eutrema salsugineum]
           gi|557105910|gb|ESQ46235.1| hypothetical protein
           EUTSA_v10000094mg [Eutrema salsugineum]
          Length = 611

 Score =  170 bits (431), Expect = 5e-40
 Identities = 89/179 (49%), Positives = 118/179 (65%)
 Frame = -2

Query: 599 KLSYIPYRRHYTSLIENYTNPSPQSEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYAS 420
           K  +  +  H  +L  + ++ + QS IL L K G L  A+Q+LNST+S +I+ KP +YAS
Sbjct: 9   KRHFSQHSSHQLALSISSSSSTKQSRILELCKSGQLMDAIQILNSTESCEIAAKPNLYAS 68

Query: 419 LLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFER 240
           LLQTC K  SF HGLQ H HV+KSGLE DR+VGNSLLS+YFKLG    ETR+VFD +F +
Sbjct: 69  LLQTCTKVRSFIHGLQFHGHVVKSGLETDRYVGNSLLSLYFKLGPDMRETRRVFDGMFIK 128

Query: 239 DVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGRYY 63
           D ISWTSM+SGY  + +   A+ +F EM+  GL P+     S + ACS  G +  GR +
Sbjct: 129 DAISWTSMMSGYIGSKEHVKALEMFMEMVTFGLEPNAYTLSSAIKACSELGEVTLGRCF 187



 Score =  112 bits (281), Expect = 1e-22
 Identities = 53/142 (37%), Positives = 88/142 (61%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L+ C    +   G ++H   I+ G   +  V ++L+ +Y K G     TR V+  +
Sbjct: 367 FGTVLKACAGLAAVRLGKEVHGQYIRRGCRDNVIVESALVDVYGKSGCIDSATR-VYSRM 425

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             R++I+W +M+S    NG+G +A+  F++M+  G+ PD I+F++VL+ACSH+GL+DEGR
Sbjct: 426 SVRNMITWNAMLSALAQNGRGEEAITFFNDMVQKGMKPDYISFIAVLTACSHTGLVDEGR 485

Query: 68  YYFRLMTRDYTMVPRIEHYACM 3
            YF LM   Y + P  EHY+CM
Sbjct: 486 NYFELMVECYGIKPGTEHYSCM 507



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L  C        G +IH  +I SG+  +  VG+SLL MY K G   +E R+VF+ +
Sbjct: 270 FGTVLTACGNLRRLKQGKEIHGKLITSGIGSNVVVGSSLLDMYGKCG-SVWEARQVFNRM 328

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
            +++++SW++++ GY  NG+      +F +M +     D   F +VL AC+    +  G+
Sbjct: 329 SKKNIVSWSALLGGYCQNGEHDKVCEIFRKMEEK----DLYCFGTVLKACAGLAAVRLGK 384

Query: 68  ----YYFRLMTRDYTMV 30
                Y R   RD  +V
Sbjct: 385 EVHGQYIRRGCRDNVIV 401



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
 Frame = -2

Query: 425 ASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLF 246
           +S ++ C +      G   H  VI  G E++ F+ ++L  MY  +     + R+VFD + 
Sbjct: 169 SSAIKACSELGEVTLGRCFHGVVITRGFEWNHFISSTLAYMY-GVNREPVDARRVFDEMS 227

Query: 245 ERDVISWTSMISGYGMNGQGRDAVALFSEM-LDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
           E D+  WT+++S + MN    +A+ LF  M    GL+PD   F +VL+AC +   L +G+
Sbjct: 228 EPDMFCWTAVLSAFSMNDLYEEALWLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGK 287


>ref|XP_009111152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Brassica rapa]
          Length = 604

 Score =  169 bits (427), Expect = 1e-39
 Identities = 87/179 (48%), Positives = 119/179 (66%), Gaps = 3/179 (1%)
 Frame = -2

Query: 578 RRHYTSLIENYTNPSP---QSEILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYASLLQT 408
           +RH++  +    +PS    QS I  L K G L+ A+++LN+T S +IS KP +YA+LLQT
Sbjct: 6   KRHFSQRLTPLVSPSSPTKQSRIRELCKSGRLTDAIRILNTTLSCEISAKPNLYATLLQT 65

Query: 407 CIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERDVIS 228
           C K  SF HGLQ H+HV+KSGLE DR+VGNSLLS+YFKLGH   ETR+VFD +F +D IS
Sbjct: 66  CTKVLSFTHGLQFHAHVVKSGLETDRYVGNSLLSLYFKLGHDMKETRRVFDGMFVKDAIS 125

Query: 227 WTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGRYYFRLM 51
           W+SM+SGY    +  +A+ +F EM+  GL P+       + ACS  G +  GR +  L+
Sbjct: 126 WSSMMSGYVRGKEHVEALEMFGEMVSFGLDPNAFTLSGAVKACSEIGDVRLGRCFHCLV 184



 Score =  112 bits (280), Expect = 2e-22
 Identities = 52/142 (36%), Positives = 89/142 (62%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L+ C    +   G ++H   ++ G   +  V ++L+ +Y K G     TR V+  +
Sbjct: 360 FGTVLKACAGLAAVRLGKEVHGQYVRRGCRDNVIVESALVDLYGKSGCVDSATR-VYSKM 418

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             R++I+W +M+S    NG+G +AV+ F +M+  G+ PD I+F++VL+ACSH+GL++EGR
Sbjct: 419 AIRNMITWNAMLSALAQNGRGEEAVSFFDDMVKKGIKPDYISFIAVLTACSHTGLVEEGR 478

Query: 68  YYFRLMTRDYTMVPRIEHYACM 3
            YF +MT  Y + P  EHY+CM
Sbjct: 479 NYFAMMTDSYGIKPGTEHYSCM 500



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L  C        G +IH  +I +G+  +  V +SLL MY K G    E R+VF+ +
Sbjct: 263 FGTVLTACGNLRRVKRGKEIHGKLITNGISSNVVVESSLLDMYGKCG-SVREARQVFNGM 321

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
            +++ +SW++++ GY  NG+    + +F EM +     D   F +VL AC+    +  G+
Sbjct: 322 SKKNTVSWSALLGGYCQNGEHERVIEMFREMEEK----DLYCFGTVLKACAGLAAVRLGK 377

Query: 68  ----YYFRLMTRDYTMV 30
                Y R   RD  +V
Sbjct: 378 EVHGQYVRRGCRDNVIV 394



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
 Frame = -2

Query: 488 QAVQLLNSTDSHKISIKPVIYASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLL 309
           +A+++     S  +       +  ++ C +      G   H  VI  G E++  + ++L 
Sbjct: 141 EALEMFGEMVSFGLDPNAFTLSGAVKACSEIGDVRLGRCFHCLVIARGFEWNHVISSTLA 200

Query: 308 SMYFKLGHGFFETRKVFDNLFERDVISWTSMISGYGMNGQGRDAVALFSEM-LDSGLIPD 132
            MY  +     + R+VFD + E DV SWT+++S Y  N    +A+ LF  +    GL+PD
Sbjct: 201 YMY-GVNQEPVDARRVFDEMPEPDVFSWTAVLSAYSKNDLYEEALGLFYVVNRGKGLVPD 259

Query: 131 QIAFVSVLSACSHSGLLDEGR 69
           +  F +VL+AC +   +  G+
Sbjct: 260 ESTFGTVLTACGNLRRVKRGK 280


>ref|XP_011045469.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Populus euphratica]
          Length = 606

 Score =  168 bits (426), Expect = 2e-39
 Identities = 91/177 (51%), Positives = 121/177 (68%), Gaps = 5/177 (2%)
 Frame = -2

Query: 578 RRHYTSL--IENYTNPSPQSE---ILNLSKLGSLSQAVQLLNSTDSHKISIKPVIYASLL 414
           +RHY++L  +   T  SPQS+   I+   K GSL +A+ +LNS D  ++S KP  YASLL
Sbjct: 8   QRHYSTLASLNLKTFESPQSKAYKIIQYCKSGSLFEAIHVLNSIDWTRLSNKPFFYASLL 67

Query: 413 QTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNLFERDV 234
           QTC KA SF HG+Q H+HVIKSGL+ DRFVGNSLL++YFKLG   FE R+VFD LF +D+
Sbjct: 68  QTCTKAVSFTHGIQFHAHVIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYKDL 127

Query: 233 ISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGRYY 63
           ISWTSMI+GY    + + ++ LF EML  G+ P+     +V+ ACS  G L  G+ +
Sbjct: 128 ISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCF 184



 Score =  103 bits (256), Expect = 1e-19
 Identities = 53/142 (37%), Positives = 82/142 (57%)
 Frame = -2

Query: 428 YASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFFETRKVFDNL 249
           + ++L+ C    +     ++H   +K     D    ++L+ +Y K G   F  R +F  +
Sbjct: 364 FGTVLRACAGLAAVRQVKEVHFQYVKRCCWRDVVTESALVDLYAKCGCIDFAYR-IFVRM 422

Query: 248 FERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACSHSGLLDEGR 69
             R++I+W SMI G+  NG+  +   LF EM++ G+ PD I+FV VL ACSH+GL+D+G+
Sbjct: 423 SVRNLITWNSMIYGFAQNGRCGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGK 482

Query: 68  YYFRLMTRDYTMVPRIEHYACM 3
            YF  MT  Y + P IEHY CM
Sbjct: 483 KYFAAMTELYEIKPGIEHYNCM 504



 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 37/120 (30%), Positives = 64/120 (53%)
 Frame = -2

Query: 455 HKISIKPVIYASLLQTCIKAHSFNHGLQIHSHVIKSGLEFDRFVGNSLLSMYFKLGHGFF 276
           H +S     + ++L  C        G ++H+ VI SGL  + FV +SL+ MY K      
Sbjct: 258 HGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKC-RLVN 316

Query: 275 ETRKVFDNLFERDVISWTSMISGYGMNGQGRDAVALFSEMLDSGLIPDQIAFVSVLSACS 96
           ++++VFD +  ++++SWT+++ GY  NG     + +F E    G   D  +F +VL AC+
Sbjct: 317 QSQRVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFRE----GKGVDTYSFGTVLRACA 372