BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00028076
         (1359 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007761644.1| reverse transcriptase [Rose yellow vein viru...   265   9e-68
gb|ALF37644.1| putative reverse transcriptase [Strawberry vein b...   192   4e-46
emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]         192   4e-46
ref|NP_043933.1| hypothetical protein [Strawberry vein banding v...   191   1e-45
gb|AKB94071.1| ORF V protein [Strawberry vein banding virus]          191   1e-45
ref|YP_009165750.1| ORF5 [Atractylodes mild mottle virus] gi|926...   168   4e-42
dbj|BAO53526.1| reverse transcriptase [Cauliflower mosaic virus]      165   1e-37
dbj|BAO53435.1| reverse transcriptase [Cauliflower mosaic virus]      165   1e-37
sp|Q02964.1|POL_CAMVE RecName: Full=Enzymatic polyprotein; Inclu...   164   1e-37
gb|AII00790.1| reverse transcriptase [Cauliflower mosaic virus]       164   1e-37
gb|AIE12124.1| reverse transcriptase [Cauliflower mosaic virus]       164   1e-37
gb|AHA91342.1| reverse transcriptase [Cauliflower mosaic virus] ...   164   1e-37
gb|AHA91338.1| reverse transcriptase [Cauliflower mosaic virus]       164   1e-37
gb|AHA91331.1| reverse transcriptase [Cauliflower mosaic virus]       164   1e-37
gb|AHA91317.1| reverse transcriptase [Cauliflower mosaic virus]       164   1e-37
gb|AHA91297.1| reverse transcriptase [Cauliflower mosaic virus]       164   1e-37
dbj|BAO53631.1| reverse transcriptase [Cauliflower mosaic virus]      164   1e-37
dbj|BAO53610.1| reverse transcriptase [Cauliflower mosaic virus]      164   1e-37
dbj|BAO53421.1| reverse transcriptase [Cauliflower mosaic virus]      164   1e-37
dbj|BAO53407.1| reverse transcriptase [Cauliflower mosaic virus]      164   1e-37

>ref|YP_007761644.1| reverse transcriptase [Rose yellow vein virus]
            gi|397559412|gb|AFO54491.1| reverse transcriptase [Rose
            yellow vein virus]
          Length = 819

 Score =  265 bits (676), Expect = 9e-68
 Identities = 145/309 (46%), Positives = 196/309 (63%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSRYEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLKE 395
            W  MPFGLA  PSIFQ KM+ +L  + ++C VYIDDII+FSR ++EH  H+  IA  LK+
Sbjct: 508  WLVMPFGLATAPSIFQAKMDNVLEDHHDYCLVYIDDIIVFSRTLEEHKIHVITIAKTLKK 567

Query: 396  NGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLIN 575
            NGI+ISK+KMEL  TKI FLGCEIE GR++LQ HVL  L  FP EIK +K+LQSFLG+IN
Sbjct: 568  NGIVISKKKMELGLTKINFLGCEIENGRIILQNHVLENLSKFPSEIKDKKELQSFLGIIN 627

Query: 576  YVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDKL 755
            Y ASH+  E+  L+ PLQ KL+ KN  W WT  D Q+V  I+ +C NLP L LP  GDKL
Sbjct: 628  YAASHYSIEVTKLRVPLQKKLK-KNYIWSWTEQDKQIVEQIKTICQNLPALELPKNGDKL 686

Query: 756  LVTTDASDSVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRNYGQL 935
            ++TTDASD     G + +   + +   +  + +      + T  +         +    +
Sbjct: 687  VLTTDASDK-HWAGVLQF--YRKIEQEVFEKDLRVSRYCSGTWNQTEQNWSTFGKELRAI 743

Query: 936  *KSLKCFRIFLLEEFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDKLSILSFFNLTEIKHI 1115
              +L+ F++FL E F L +D+ AVI FL KK L++ R+ +++RDKL IL +     +KHI
Sbjct: 744  KLALQKFKLFLFEPFTLYSDNLAVINFL-KKDLNEKRSQREIRDKLDILQYQGWMTLKHI 802

Query: 1116 SGAKNHFAD 1142
             G KN  AD
Sbjct: 803  PGTKNVLAD 811


>gb|ALF37644.1| putative reverse transcriptase [Strawberry vein banding virus]
          Length = 704

 Score =  192 bits (489), Expect = 4e-46
 Identities = 119/321 (37%), Positives = 183/321 (57%), Gaps = 12/321 (3%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSR-YEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLK 392
            W  MPFGL   P+IFQR M+  LS  Y  FCAVY+DDII+FS+  DEH  H++++ N  K
Sbjct: 397  WLVMPFGLKQAPAIFQRHMDESLSNMYPSFCAVYVDDIIVFSKTEDEHLGHVKIVLNRCK 456

Query: 393  ENGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLI 572
              GI++SK+K +LCKT I FLG  IE+G + +Q H+   L  FP+++  R  LQ FLGL+
Sbjct: 457  ALGIVLSKKKAQLCKTTINFLGLVIERGNLKVQSHIGLHLTAFPDQLADRNALQRFLGLL 516

Query: 573  NYVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDK 752
            NY+ S + P+IA L++PLQ KL+++ T W WT  DT+ VR I++L  +LP L  P+  DK
Sbjct: 517  NYI-SAYFPKIANLRSPLQVKLKKEIT-WSWTEKDTETVRKIKSLVKSLPDLYNPSPEDK 574

Query: 753  LLVTTDASD---SVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRN 923
             ++  DASD     +L  ++P   E              +   A    KP        +N
Sbjct: 575  PIIECDASDDHWGAVLKAKLPEGKEV-------------ICRYASGTFKPAE------KN 615

Query: 924  YG-------QL*KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDKLSI 1079
            Y         + K++K FR ++L  +F+++TD+     F++       + ++ VR ++++
Sbjct: 616  YHSNEKEILSIIKAIKAFRAYILPYKFLVRTDNTNAAYFVRTNIAGDYKQSRLVRWQMAL 675

Query: 1080 LSFFNLTEIKHISGAKNHFAD 1142
              +    +I+H+SG KN  AD
Sbjct: 676  REY--SFDIEHVSGQKNVLAD 694


>emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]
          Length = 699

 Score =  192 bits (489), Expect = 4e-46
 Identities = 119/321 (37%), Positives = 183/321 (57%), Gaps = 12/321 (3%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSR-YEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLK 392
            W  MPFGL   P+IFQR M+  LS  Y  FCAVY+DDII+FS+  DEH  H++++ N  K
Sbjct: 392  WLVMPFGLKQAPAIFQRHMDESLSNMYPSFCAVYVDDIIVFSKTEDEHLGHVKIVLNRCK 451

Query: 393  ENGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLI 572
              GI++SK+K +LCKT I FLG  IE+G + +Q H+   L  FP+++  R  LQ FLGL+
Sbjct: 452  ALGIVLSKKKAQLCKTTINFLGLVIERGNLKVQSHIGLHLTAFPDQLADRNALQRFLGLL 511

Query: 573  NYVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDK 752
            NY+ S + P+IA L++PLQ KL+++ T W WT  DT+ VR I++L  +LP L  P+  DK
Sbjct: 512  NYI-SAYFPKIANLRSPLQVKLKKEIT-WSWTEKDTETVRKIKSLVKSLPDLYNPSPEDK 569

Query: 753  LLVTTDASD---SVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRN 923
             ++  DASD     +L  ++P   E              +   A    KP        +N
Sbjct: 570  PIIECDASDDHWGAVLKAKLPEGKEV-------------ICRYASGTFKPAE------KN 610

Query: 924  YG-------QL*KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDKLSI 1079
            Y         + K++K FR ++L  +F+++TD+     F++       + ++ VR ++++
Sbjct: 611  YHSNEKEILSIIKAIKAFRAYILPYKFLVRTDNTNAAYFVRTNIAGDYKQSRLVRWQMAL 670

Query: 1080 LSFFNLTEIKHISGAKNHFAD 1142
              +    +I+H+SG KN  AD
Sbjct: 671  REY--SFDIEHVSGQKNVLAD 689


>ref|NP_043933.1| hypothetical protein [Strawberry vein banding virus]
            gi|1360613|emb|CAA65970.1| ORF V [Strawberry vein banding
            virus]
          Length = 708

 Score =  191 bits (486), Expect = 1e-45
 Identities = 119/321 (37%), Positives = 183/321 (57%), Gaps = 12/321 (3%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSR-YEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLK 392
            W  MPFGL   P+IFQR M+  LS  Y +FCAVY+DDII+FS+  +EH  H++++ N  K
Sbjct: 401  WLVMPFGLKQAPAIFQRHMDESLSNMYPQFCAVYVDDIIVFSKTEEEHLGHVKIVLNRCK 460

Query: 393  ENGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLI 572
              GI++SK+K +LCKT I FLG  IE+G + +Q H+   L  FP+++  R  LQ FLGL+
Sbjct: 461  ALGIVLSKKKAQLCKTTINFLGLVIERGNLKVQSHIGLHLVAFPDQLSDRNALQRFLGLL 520

Query: 573  NYVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDK 752
            NY+ S + P+IA L++PLQ KL+++ T W WT  DT+ VR I++L   LP L  P+  DK
Sbjct: 521  NYI-SAYFPKIANLRSPLQVKLKKEIT-WSWTEKDTETVRKIKSLVKTLPDLYNPSPEDK 578

Query: 753  LLVTTDASD---SVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRN 923
             ++  DASD     IL  ++P   E              +   A    KP        +N
Sbjct: 579  PIIECDASDDHWGAILKAKLPEGKEV-------------ICRYASGTFKPAE------KN 619

Query: 924  YG-------QL*KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDKLSI 1079
            Y         + K++K FR ++L  +F+++TD+     F++       + ++ VR ++++
Sbjct: 620  YHSNEKEILSIIKAIKAFRAYILPYKFLVRTDNTNAAYFVRTNIAGDYKQSRLVRWQMAL 679

Query: 1080 LSFFNLTEIKHISGAKNHFAD 1142
              +    +I+H+SG KN  AD
Sbjct: 680  REY--SFDIEHVSGQKNVLAD 698


>gb|AKB94071.1| ORF V protein [Strawberry vein banding virus]
          Length = 704

 Score =  191 bits (485), Expect = 1e-45
 Identities = 118/321 (36%), Positives = 182/321 (56%), Gaps = 12/321 (3%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSR-YEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLK 392
            W  MPFGL   P+IFQR M+  LS  Y  FCAVY+DDII+FS+  DEH  H+ ++ N  K
Sbjct: 397  WLVMPFGLKQAPAIFQRHMDESLSNMYPSFCAVYVDDIIVFSKTEDEHLGHVRIVLNRCK 456

Query: 393  ENGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLI 572
              GI++SK+K +LCKT I FLG  IE+G + +Q H+   L  FP+++  R  LQ FLGL+
Sbjct: 457  ALGIVLSKKKAQLCKTTINFLGLVIERGNLKVQSHIGLHLTAFPDQLADRNALQRFLGLL 516

Query: 573  NYVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDK 752
            NY+ S + P+IA L++PLQ KL+++ T W WT  DT+ VR I++L  +LP L  P+  D+
Sbjct: 517  NYI-SAYFPKIANLRSPLQVKLKKEIT-WSWTEKDTETVRKIKSLVKSLPDLYNPSPEDR 574

Query: 753  LLVTTDASD---SVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRN 923
             ++  DASD     +L  ++P   E              +   A    KP        +N
Sbjct: 575  PIIECDASDDHWGAVLKAKLPEGKEV-------------ICRYASGTFKPAE------KN 615

Query: 924  YG-------QL*KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDKLSI 1079
            Y         + K++K FR ++L  +F+++TD+     F++       + ++ VR ++++
Sbjct: 616  YHSNEKEILSIIKAIKAFRAYILPYKFLVRTDNTNAAYFVRTNIAGDYKQSRLVRWQMAL 675

Query: 1080 LSFFNLTEIKHISGAKNHFAD 1142
              +    +I+H+SG KN  AD
Sbjct: 676  REY--SFDIEHVSGQKNVLAD 694


>ref|YP_009165750.1| ORF5 [Atractylodes mild mottle virus] gi|926574238|gb|ALD49090.1|
           ORF5 [Atractylodes mild mottle virus]
          Length = 679

 Score =  168 bits (426), Expect(2) = 4e-42
 Identities = 87/189 (46%), Positives = 119/189 (62%)
 Frame = +3

Query: 216 WKQMPFGLANTPSIFQRKMNIILSRYEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLKE 395
           WK +PFGL   PSIFQR MN     +EEFC VY+DDI++FS+   EH KH+  I    K 
Sbjct: 374 WKVVPFGLKQAPSIFQRHMNNAFREFEEFCCVYVDDILVFSKNETEHRKHVIAILEQCKN 433

Query: 396 NGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLIN 575
            GII+SK+K  L KTKI FLG EI++G    Q H+L  +  FP+ ++ +K LQ FLG++ 
Sbjct: 434 LGIILSKKKAHLFKTKINFLGLEIDQGSHKPQNHILEHIHKFPDRLEDKKQLQRFLGILT 493

Query: 576 YVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDKL 755
           Y AS + P++A ++ P QAKL+ K+  W WT  DT ++  I+    + PTL  P   D L
Sbjct: 494 Y-ASDYIPKLAQIRKPFQAKLK-KDVTWSWTDSDTSLMIKIKKGLKSFPTLYHPKEEDNL 551

Query: 756 LVTTDASDS 782
           ++  DASDS
Sbjct: 552 IIECDASDS 560



 Score = 32.7 bits (73), Expect(2) = 4e-42
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +2

Query: 785 DTTWAGTLQFRKKLSDGSYESNYSIARYASGNWNQTETNWTTFDKELRAIVKKSQMF 955
           D+ W G L+ +    D  Y     I RY SG++ Q E N+ + +KE+ A +   + F
Sbjct: 559 DSFWGGILKAKTIDEDKEY-----ICRYTSGSFKQAELNYHSNEKEILAAMNTIKKF 610


>dbj|BAO53526.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 671

 Score =  165 bits (417), Expect = 1e-37
 Identities = 105/312 (33%), Positives = 163/312 (52%), Gaps = 3/312 (0%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSRYEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLKE 395
            W  +PFGL   PSIFQR M+     + +FC VY+DDI+IFS   ++H  H+ +I     +
Sbjct: 361  WNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILIFSNNEEDHLLHVAMILQKCNQ 420

Query: 396  NGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLIN 575
            +GII+SK+K +L K KI FLG EI++G    Q H+L  +  FP+ ++ +K LQ FLG++ 
Sbjct: 421  HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 480

Query: 576  YVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDKL 755
            Y AS + P++A ++ PLQAKL+E N  W WT  DT  ++ ++      P L  P   +KL
Sbjct: 481  Y-ASDYIPKLAQIRKPLQAKLKE-NVPWRWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKL 538

Query: 756  LVTTDASDSVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRNYGQL 935
            ++ TDASD           + +     L+ +        AE            + N    
Sbjct: 539  IIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKTAEKNYHSNDKETLAVIN---- 594

Query: 936  *KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDK--LSILSFFNLTEI 1106
              ++K F I+L    F+++TD+     F+        +  + +R +  LS  SF    ++
Sbjct: 595  --TIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSF----DV 648

Query: 1107 KHISGAKNHFAD 1142
            +HI G  NHFAD
Sbjct: 649  EHIKGTDNHFAD 660


>dbj|BAO53435.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  165 bits (417), Expect = 1e-37
 Identities = 104/312 (33%), Positives = 164/312 (52%), Gaps = 3/312 (0%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSRYEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLKE 395
            W  +PFGL   PSIFQR M+     + +FC VY+DDI++FS   ++H  H+ +I     +
Sbjct: 364  WNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQ 423

Query: 396  NGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLIN 575
            +GII+SK+K +L K KI FLG EI++G    Q H+L  +  FP+ ++ +K LQ FLG++ 
Sbjct: 424  HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 483

Query: 576  YVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDKL 755
            Y AS + P++A ++ PLQAKL+E N  W WT  DT  ++ ++      P L  P   +KL
Sbjct: 484  Y-ASDYIPKLAQIRKPLQAKLKE-NVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKL 541

Query: 756  LVTTDASDSVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRNYGQL 935
            ++ TDASD+          + +     L+ +        AE            + N    
Sbjct: 542  IIETDASDNYWGGMLKAIKINEGTNTELICRYASGSFKAAEKNYHSNDKETLAVIN---- 597

Query: 936  *KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDK--LSILSFFNLTEI 1106
              ++K F I+L    F+++TD+     F+        +  + +R +  LS  SF    ++
Sbjct: 598  --TIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSF----DV 651

Query: 1107 KHISGAKNHFAD 1142
            +HI G  NHFAD
Sbjct: 652  EHIKGTDNHFAD 663


>sp|Q02964.1|POL_CAMVE RecName: Full=Enzymatic polyprotein; Includes: RecName: Full=Aspartic
            protease; Includes: RecName: Full=Endonuclease; Includes:
            RecName: Full=Reverse transcriptase [Cauliflower mosaic
            virus (STRAIN BBC)] gi|293185|gb|AAA62375.1| reverse
            transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score =  164 bits (416), Expect = 1e-37
 Identities = 104/312 (33%), Positives = 163/312 (52%), Gaps = 3/312 (0%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSRYEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLKE 395
            W  +PFGL   PSIFQR M+     + +FC VY+DDI++FS   ++H  H+ +I     +
Sbjct: 369  WNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQ 428

Query: 396  NGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLIN 575
            +GII+SK+K +L K KI FLG EI++G    Q H+L  +  FP+ ++ +K LQ FLG++ 
Sbjct: 429  HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 488

Query: 576  YVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDKL 755
            Y AS + P++A ++ PLQAKL+E N  W WT  DT  ++ ++      P L  P   +KL
Sbjct: 489  Y-ASDYIPKLAQIRKPLQAKLKE-NVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKL 546

Query: 756  LVTTDASDSVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRNYGQL 935
            ++ TDASD           + +     L+ +        AE            + N    
Sbjct: 547  IIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAERNYHSNDKETLAVIN---- 602

Query: 936  *KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDK--LSILSFFNLTEI 1106
              ++K F I+L    F+++TD+     F+        +  + +R +  LS  SF    ++
Sbjct: 603  --TIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSF----DV 656

Query: 1107 KHISGAKNHFAD 1142
            +HI G  NHFAD
Sbjct: 657  EHIKGTDNHFAD 668


>gb|AII00790.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score =  164 bits (416), Expect = 1e-37
 Identities = 104/312 (33%), Positives = 163/312 (52%), Gaps = 3/312 (0%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSRYEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLKE 395
            W  +PFGL   PSIFQR M+     + +FC VY+DDI++FS   ++H  H+ +I     +
Sbjct: 365  WNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQ 424

Query: 396  NGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLIN 575
            +GII+SK+K +L K KI FLG EI++G    Q H+L  +  FP+ ++ +K LQ FLG++ 
Sbjct: 425  HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 484

Query: 576  YVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDKL 755
            Y AS + P++A ++ PLQAKL+E N  W WT  DT  ++ ++      P L  P   +KL
Sbjct: 485  Y-ASDYIPKLAQIRKPLQAKLKE-NVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKL 542

Query: 756  LVTTDASDSVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRNYGQL 935
            ++ TDASD           + +     L+ +        AE            + N    
Sbjct: 543  IIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKNYHSNDKETLAVIN---- 598

Query: 936  *KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDK--LSILSFFNLTEI 1106
              ++K F I+L    F+++TD+     F+        +  + +R +  LS  SF    ++
Sbjct: 599  --TIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSF----DV 652

Query: 1107 KHISGAKNHFAD 1142
            +HI G  NHFAD
Sbjct: 653  EHIKGTDNHFAD 664


>gb|AIE12124.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 680

 Score =  164 bits (416), Expect = 1e-37
 Identities = 104/312 (33%), Positives = 163/312 (52%), Gaps = 3/312 (0%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSRYEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLKE 395
            W  +PFGL   PSIFQR M+     + +FC VY+DDI++FS   ++H  H+ +I     +
Sbjct: 370  WNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQ 429

Query: 396  NGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLIN 575
            +GII+SK+K +L K KI FLG EI++G    Q H+L  +  FP+ ++ +K LQ FLG++ 
Sbjct: 430  HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 489

Query: 576  YVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDKL 755
            Y AS + P++A ++ PLQAKL+E N  W WT  DT  ++ ++      P L  P   +KL
Sbjct: 490  Y-ASDYIPKLAQIRKPLQAKLKE-NVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKL 547

Query: 756  LVTTDASDSVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRNYGQL 935
            ++ TDASD           + +     L+ +        AE            + N    
Sbjct: 548  IIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKNYHSNDKETLAVIN---- 603

Query: 936  *KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDK--LSILSFFNLTEI 1106
              ++K F I+L    F+++TD+     F+        +  + +R +  LS  SF    ++
Sbjct: 604  --TIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSF----DV 657

Query: 1107 KHISGAKNHFAD 1142
            +HI G  NHFAD
Sbjct: 658  EHIKGTDNHFAD 669


>gb|AHA91342.1| reverse transcriptase [Cauliflower mosaic virus]
            gi|558762564|gb|AHA91352.1| reverse transcriptase
            [Cauliflower mosaic virus]
          Length = 674

 Score =  164 bits (416), Expect = 1e-37
 Identities = 104/312 (33%), Positives = 163/312 (52%), Gaps = 3/312 (0%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSRYEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLKE 395
            W  +PFGL   PSIFQR M+     + +FC VY+DDI++FS   ++H  H+ +I     +
Sbjct: 364  WNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQ 423

Query: 396  NGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLIN 575
            +GII+SK+K +L K KI FLG EI++G    Q H+L  +  FP+ ++ +K LQ FLG++ 
Sbjct: 424  HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 483

Query: 576  YVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDKL 755
            Y AS + P++A ++ PLQAKL+E N  W WT  DT  ++ ++      P L  P   +KL
Sbjct: 484  Y-ASDYIPKLAQIRKPLQAKLKE-NVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKL 541

Query: 756  LVTTDASDSVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRNYGQL 935
            ++ TDASD           + +     L+ +        AE            + N    
Sbjct: 542  IIETDASDDYWGGMLKAIKINEGANTELICRYASGSFKTAEKNYHSNDKETLAVIN---- 597

Query: 936  *KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDK--LSILSFFNLTEI 1106
              ++K F I+L    F+++TD+     F+        +  + +R +  LS  SF    ++
Sbjct: 598  --TIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSF----DV 651

Query: 1107 KHISGAKNHFAD 1142
            +HI G  NHFAD
Sbjct: 652  EHIKGTDNHFAD 663


>gb|AHA91338.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  164 bits (416), Expect = 1e-37
 Identities = 104/312 (33%), Positives = 163/312 (52%), Gaps = 3/312 (0%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSRYEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLKE 395
            W  +PFGL   PSIFQR M+     + +FC VY+DDI++FS   ++H  H+ +I     +
Sbjct: 364  WNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQ 423

Query: 396  NGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLIN 575
            +GII+SK+K +L K KI FLG EI++G    Q H+L  +  FP+ ++ +K LQ FLG++ 
Sbjct: 424  HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 483

Query: 576  YVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDKL 755
            Y AS + P++A ++ PLQAKL+E N  W WT  DT  ++ ++      P L  P   +KL
Sbjct: 484  Y-ASDYIPKLAQIRKPLQAKLKE-NVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKL 541

Query: 756  LVTTDASDSVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRNYGQL 935
            ++ TDASD           + +     L+ +        AE            + N    
Sbjct: 542  IIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKNYHSNDKETLAVIN---- 597

Query: 936  *KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDK--LSILSFFNLTEI 1106
              ++K F I+L    F+++TD+     F+        +  + +R +  LS  SF    ++
Sbjct: 598  --TIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSF----DV 651

Query: 1107 KHISGAKNHFAD 1142
            +HI G  NHFAD
Sbjct: 652  EHIKGTDNHFAD 663


>gb|AHA91331.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  164 bits (416), Expect = 1e-37
 Identities = 104/312 (33%), Positives = 163/312 (52%), Gaps = 3/312 (0%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSRYEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLKE 395
            W  +PFGL   PSIFQR M+     + +FC VY+DDI++FS   ++H  H+ +I     +
Sbjct: 364  WNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQ 423

Query: 396  NGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLIN 575
            +GII+SK+K +L K KI FLG EI++G    Q H+L  +  FP+ ++ +K LQ FLG++ 
Sbjct: 424  HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 483

Query: 576  YVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDKL 755
            Y AS + P++A ++ PLQAKL+E N  W WT  DT  ++ ++      P L  P   +KL
Sbjct: 484  Y-ASDYIPKLAQIRKPLQAKLKE-NVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKL 541

Query: 756  LVTTDASDSVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRNYGQL 935
            ++ TDASD           + +     L+ +        AE            + N    
Sbjct: 542  IIETDASDDYWGGMLKAIKINEGANTELICRYASGSFKAAEKNYHSNDKETLAVIN---- 597

Query: 936  *KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDK--LSILSFFNLTEI 1106
              ++K F I+L    F+++TD+     F+        +  + +R +  LS  SF    ++
Sbjct: 598  --TIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSF----DV 651

Query: 1107 KHISGAKNHFAD 1142
            +HI G  NHFAD
Sbjct: 652  EHIKGTDNHFAD 663


>gb|AHA91317.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  164 bits (416), Expect = 1e-37
 Identities = 104/312 (33%), Positives = 163/312 (52%), Gaps = 3/312 (0%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSRYEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLKE 395
            W  +PFGL   PSIFQR M+     + +FC VY+DDI++FS   ++H  H+ +I     +
Sbjct: 364  WNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQ 423

Query: 396  NGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLIN 575
            +GII+SK+K +L K KI FLG EI++G    Q H+L  +  FP+ ++ +K LQ FLG++ 
Sbjct: 424  HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 483

Query: 576  YVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDKL 755
            Y AS + P++A ++ PLQAKL+E N  W WT  DT  ++ ++      P L  P   +KL
Sbjct: 484  Y-ASDYIPKLAQIRKPLQAKLKE-NVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKL 541

Query: 756  LVTTDASDSVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRNYGQL 935
            ++ TDASD           + +     L+ +        AE            + N    
Sbjct: 542  IIETDASDDYWGGMLKAIKINEGANTELICRYASGSFKAAEKNYHSNDKETLAVIN---- 597

Query: 936  *KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDK--LSILSFFNLTEI 1106
              ++K F I+L    F+++TD+     F+        +  + +R +  LS  SF    ++
Sbjct: 598  --TIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSF----DV 651

Query: 1107 KHISGAKNHFAD 1142
            +HI G  NHFAD
Sbjct: 652  EHIKGTDNHFAD 663


>gb|AHA91297.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  164 bits (416), Expect = 1e-37
 Identities = 104/312 (33%), Positives = 163/312 (52%), Gaps = 3/312 (0%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSRYEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLKE 395
            W  +PFGL   PSIFQR M+     + +FC VY+DDI++FS   ++H  H+ +I     +
Sbjct: 364  WNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQ 423

Query: 396  NGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLIN 575
            +GII+SK+K +L K KI FLG EI++G    Q H+L  +  FP+ ++ +K LQ FLG++ 
Sbjct: 424  HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 483

Query: 576  YVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDKL 755
            Y AS + P++A ++ PLQAKL+E N  W WT  DT  ++ ++      P L  P   +KL
Sbjct: 484  Y-ASDYIPKLAQIRKPLQAKLKE-NVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKL 541

Query: 756  LVTTDASDSVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRNYGQL 935
            ++ TDASD           + +     L+ +        AE            + N    
Sbjct: 542  IIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKNYHSNDKETLAVIN---- 597

Query: 936  *KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDK--LSILSFFNLTEI 1106
              ++K F I+L    F+++TD+     F+        +  + +R +  LS  SF    ++
Sbjct: 598  --TIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSF----DV 651

Query: 1107 KHISGAKNHFAD 1142
            +HI G  NHFAD
Sbjct: 652  EHIKGTDNHFAD 663


>dbj|BAO53631.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  164 bits (416), Expect = 1e-37
 Identities = 104/312 (33%), Positives = 163/312 (52%), Gaps = 3/312 (0%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSRYEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLKE 395
            W  +PFGL   PSIFQR M+     + +FC VY+DDI++FS   ++H  H+ +I     +
Sbjct: 364  WNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQ 423

Query: 396  NGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLIN 575
            +GII+SK+K +L K KI FLG EI++G    Q H+L  +  FP+ ++ +K LQ FLG++ 
Sbjct: 424  HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 483

Query: 576  YVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDKL 755
            Y AS + P++A ++ PLQAKL+E N  W WT  DT  ++ ++      P L  P   +KL
Sbjct: 484  Y-ASDYIPKLAQIRKPLQAKLKE-NVPWRWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKL 541

Query: 756  LVTTDASDSVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRNYGQL 935
            ++ TDASD           + +     L+ +        AE            + N    
Sbjct: 542  IIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKNYHSNDKETLAVIN---- 597

Query: 936  *KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDK--LSILSFFNLTEI 1106
              ++K F I+L    F+++TD+     F+        +  + +R +  LS  SF    ++
Sbjct: 598  --TIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSF----DV 651

Query: 1107 KHISGAKNHFAD 1142
            +HI G  NHFAD
Sbjct: 652  EHIKGTDNHFAD 663


>dbj|BAO53610.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  164 bits (416), Expect = 1e-37
 Identities = 104/312 (33%), Positives = 163/312 (52%), Gaps = 3/312 (0%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSRYEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLKE 395
            W  +PFGL   PSIFQR M+     + +FC VY+DDI++FS   ++H  H+ +I     +
Sbjct: 364  WNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQ 423

Query: 396  NGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLIN 575
            +GII+SK+K +L K KI FLG EI++G    Q H+L  +  FP+ ++ +K LQ FLG++ 
Sbjct: 424  HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 483

Query: 576  YVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDKL 755
            Y AS + P++A ++ PLQAKL+E N  W WT  DT  ++ ++      P L  P   +KL
Sbjct: 484  Y-ASDYIPKLAQIRKPLQAKLKE-NVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKL 541

Query: 756  LVTTDASDSVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRNYGQL 935
            ++ TDASD           + +     L+ +        AE            + N    
Sbjct: 542  IIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKNYHSNDKETLAVIN---- 597

Query: 936  *KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDK--LSILSFFNLTEI 1106
              ++K F I+L    F+++TD+     F+        +  + +R +  LS  SF    ++
Sbjct: 598  --TIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSF----DV 651

Query: 1107 KHISGAKNHFAD 1142
            +HI G  NHFAD
Sbjct: 652  EHIKGTDNHFAD 663


>dbj|BAO53421.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score =  164 bits (416), Expect = 1e-37
 Identities = 104/312 (33%), Positives = 163/312 (52%), Gaps = 3/312 (0%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSRYEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLKE 395
            W  +PFGL   PSIFQR M+     + +FC VY+DDI++FS   ++H  H+ +I     +
Sbjct: 369  WNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQ 428

Query: 396  NGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLIN 575
            +GII+SK+K +L K KI FLG EI++G    Q H+L  +  FP+ ++ +K LQ FLG++ 
Sbjct: 429  HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 488

Query: 576  YVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDKL 755
            Y AS + P++A ++ PLQAKL+E N  W WT  DT  ++ ++      P L  P   +KL
Sbjct: 489  Y-ASDYIPKLAQIRKPLQAKLKE-NVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKL 546

Query: 756  LVTTDASDSVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRNYGQL 935
            ++ TDASD           + +     L+ +        AE            + N    
Sbjct: 547  IIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAERNYHSNDKETLAVIN---- 602

Query: 936  *KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDK--LSILSFFNLTEI 1106
              ++K F I+L    F+++TD+     F+        +  + +R +  LS  SF    ++
Sbjct: 603  --TIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSF----DV 656

Query: 1107 KHISGAKNHFAD 1142
            +HI G  NHFAD
Sbjct: 657  EHIKGTDNHFAD 668


>dbj|BAO53407.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score =  164 bits (416), Expect = 1e-37
 Identities = 104/312 (33%), Positives = 163/312 (52%), Gaps = 3/312 (0%)
 Frame = +3

Query: 216  WKQMPFGLANTPSIFQRKMNIILSRYEEFCAVYIDDIIIFSRAIDEHFKHLEVIANCLKE 395
            W  +PFGL   PSIFQR M+     + +FC VY+DDI++FS   ++H  H+ +I     +
Sbjct: 369  WNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQ 428

Query: 396  NGIIISKRKMELCKTKIEFLGCEIEKGRVVLQPHVLTKLRDFPEEIKKRKDLQSFLGLIN 575
            +GII+SK+K +L K KI FLG EI++G    Q H+L  +  FP+ ++ +K LQ FLG++ 
Sbjct: 429  HGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILT 488

Query: 576  YVASHHHPEIA*LKAPLQAKLREKNTDWIWTSLDTQVVRDIRNLCNNLPTLSLPTFGDKL 755
            Y AS + P++A ++ PLQAKL+E N  W WT  DT  ++ ++      P L  P   +KL
Sbjct: 489  Y-ASDYIPKLAQIRKPLQAKLKE-NVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKL 546

Query: 756  LVTTDASDSVILLGQVPYSLEKSLVMVLMNQIIP*LDMLAETGIKPRPIGPPLIRNYGQL 935
            ++ TDASD           + +     L+ +        AE            + N    
Sbjct: 547  IIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAERNYHSNDKETLAVIN---- 602

Query: 936  *KSLKCFRIFLLE-EFVLQTDSAAVIGFLKKKSLDKDRTAKQVRDK--LSILSFFNLTEI 1106
              ++K F I+L    F+++TD+     F+        +  + +R +  LS  SF    ++
Sbjct: 603  --TIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSF----DV 656

Query: 1107 KHISGAKNHFAD 1142
            +HI G  NHFAD
Sbjct: 657  EHIKGTDNHFAD 668