BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00025967
         (2258 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010648401.1| PREDICTED: endoribonuclease Dicer homolog 3a...   843   0.0  
emb|CBI20740.3| unnamed protein product [Vitis vinifera]              843   0.0  
ref|XP_010261808.1| PREDICTED: endoribonuclease Dicer homolog 3a...   841   0.0  
ref|XP_010261807.1| PREDICTED: endoribonuclease Dicer homolog 3a...   839   0.0  
ref|XP_010648400.1| PREDICTED: endoribonuclease Dicer homolog 3a...   838   0.0  
ref|XP_008220598.1| PREDICTED: endoribonuclease Dicer homolog 3 ...   823   0.0  
ref|XP_007012462.1| Endoribonuclease Dicera, putative isoform 2 ...   816   0.0  
ref|XP_007012461.1| Ribonuclease III, putative isoform 1 [Theobr...   816   0.0  
ref|XP_010049290.1| PREDICTED: endoribonuclease Dicer homolog 3 ...   803   0.0  
ref|XP_010049291.1| PREDICTED: endoribonuclease Dicer homolog 3 ...   803   0.0  
ref|XP_009359046.1| PREDICTED: endoribonuclease Dicer homolog 3a...   790   0.0  
ref|XP_012450063.1| PREDICTED: endoribonuclease Dicer homolog 3 ...   789   0.0  
ref|XP_012450062.1| PREDICTED: endoribonuclease Dicer homolog 3 ...   789   0.0  
gb|KJB65398.1| hypothetical protein B456_010G093100 [Gossypium r...   789   0.0  
gb|KJB65396.1| hypothetical protein B456_010G093100 [Gossypium r...   789   0.0  
gb|KJB65395.1| hypothetical protein B456_010G093100 [Gossypium r...   789   0.0  
gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h...   786   0.0  
ref|XP_008357238.1| PREDICTED: endoribonuclease Dicer homolog 3a...   785   0.0  
ref|XP_008357237.1| PREDICTED: endoribonuclease Dicer homolog 3a...   785   0.0  
ref|XP_012450064.1| PREDICTED: endoribonuclease Dicer homolog 3 ...   783   0.0  

>ref|XP_010648401.1| PREDICTED: endoribonuclease Dicer homolog 3a isoform X2 [Vitis
            vinifera]
          Length = 1680

 Score =  843 bits (2177), Expect = 0.0
 Identities = 449/715 (62%), Positives = 525/715 (73%), Gaps = 24/715 (3%)
 Frame = -1

Query: 2258 LKQSHNPHNLLAKAKTQGG--------MATEKPLAFVHMPAELLVPINVSISVLKSFYLL 2103
            LKQSHN HNLL     +GG        M  EK    VHMP ELLV I V I+VLKS YLL
Sbjct: 974  LKQSHNAHNLLVNFNDEGGEALQTGQKMLNEKAQTHVHMPPELLVSIEVPITVLKSSYLL 1033

Query: 2102 PSLMHRLESLMLAIQLREEISCDRNIYHIPSSLILEALTSLRCCEAFSLERLELLGDSVL 1923
            PSL+HRLESLMLA QLREEI+       I SSLILEA+T+LRC E+FS+ERLELLGDSVL
Sbjct: 1034 PSLIHRLESLMLASQLREEIAFTTGS-QISSSLILEAITTLRCSESFSMERLELLGDSVL 1092

Query: 1922 KYVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRWLAPG 1743
            KY VSC+LFLKYPKKHEGQLSARRS  VCNSTLHKLGTD  LQGYIRDGAFDPRRW+APG
Sbjct: 1093 KYAVSCHLFLKYPKKHEGQLSARRSWVVCNSTLHKLGTDRSLQGYIRDGAFDPRRWVAPG 1152

Query: 1742 QSSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEALIGAY 1563
            Q S+RPVPC CGVD  EVPL+ KF TED K VVGK+CDRGHRW+ SK+I+DC EALIGAY
Sbjct: 1153 QRSIRPVPCSCGVDALEVPLDGKFQTEDTKIVVGKSCDRGHRWMGSKTIADCVEALIGAY 1212

Query: 1562 YVGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYTFTMK 1383
            YVGGGL +A  +MKW GID E EP+L+D+AI  ASL  Y P+ + ++ LESKI Y F++K
Sbjct: 1213 YVGGGLNAALHLMKWFGIDVELEPSLVDEAIATASLRTYIPKANEIEILESKIGYEFSVK 1272

Query: 1382 GLLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLRSASV 1203
            GLLLEAITHA++QELG+ YCYQRLEFLGDSVLD+LIT HL+Q+H DIDPGELTDLRSASV
Sbjct: 1273 GLLLEAITHATEQELGVGYCYQRLEFLGDSVLDVLITWHLYQSHRDIDPGELTDLRSASV 1332

Query: 1202 NNESFAKACIRHDLQQHLQHCSGLLLEQITEYSKFISDHDR--SPFQNVKCPKVLGDLVE 1029
            NNESFA+  +R +LQQHLQHCSGLLL QI EY+K++S  D   +P Q+ K PK LGDLVE
Sbjct: 1333 NNESFAQVAVRRNLQQHLQHCSGLLLGQIKEYAKYLSGSDDVPNPLQSTKGPKALGDLVE 1392

Query: 1028 SIAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVCLQK 849
            SIAGAILIDT+LN++ VWRIFKPLLSPIVTP+KLELPP RELNELC   GYFIKE C  K
Sbjct: 1393 SIAGAILIDTKLNLNEVWRIFKPLLSPIVTPDKLELPPLRELNELCDSLGYFIKEKCTNK 1452

Query: 848  EDTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVSRK----- 684
             + VH ELRLQ+ DVLL GEGC R KK AKGQAA  LLK+LE RGIS+SR  S++     
Sbjct: 1453 GELVHAELRLQMIDVLLVGEGCGRNKKAAKGQAAAQLLKNLEKRGISYSRSNSKRRKQGA 1512

Query: 683  -------DFEMEVDSSIQDMNVDVNRKSIRYNXXXXXXXXXXTAGSPVLETSNTVPAVAQ 525
                      M  D+  Q  N D + + I+++            G  +   ++      +
Sbjct: 1513 DLVGVSSSLNMGGDACGQSNNED-SSELIKFHKKQKT------TGMQLCTRTSIANNCLE 1565

Query: 524  NSSN--LTPPATITINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGK 351
            N+    L  P   +IN KKGGPRSSLYELCKR+QWPMP+F+S EQRSR P+     S  +
Sbjct: 1566 NACKPKLDTPVIKSINMKKGGPRSSLYELCKRLQWPMPSFESKEQRSRFPIIFGEGSERR 1625

Query: 350  TCFNIFVSKIKLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTISD 186
              FN F+S I L++ + G +E  GD R DKKSS DSAAL ML+EL + G+  I D
Sbjct: 1626 EGFNSFISSISLHIPNCGVMECRGDHRADKKSSLDSAALVMLHELQRRGKLIIHD 1680


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  843 bits (2177), Expect = 0.0
 Identities = 449/715 (62%), Positives = 525/715 (73%), Gaps = 24/715 (3%)
 Frame = -1

Query: 2258 LKQSHNPHNLLAKAKTQGG--------MATEKPLAFVHMPAELLVPINVSISVLKSFYLL 2103
            LKQSHN HNLL     +GG        M  EK    VHMP ELLV I V I+VLKS YLL
Sbjct: 982  LKQSHNAHNLLVNFNDEGGEALQTGQKMLNEKAQTHVHMPPELLVSIEVPITVLKSSYLL 1041

Query: 2102 PSLMHRLESLMLAIQLREEISCDRNIYHIPSSLILEALTSLRCCEAFSLERLELLGDSVL 1923
            PSL+HRLESLMLA QLREEI+       I SSLILEA+T+LRC E+FS+ERLELLGDSVL
Sbjct: 1042 PSLIHRLESLMLASQLREEIAFTTGS-QISSSLILEAITTLRCSESFSMERLELLGDSVL 1100

Query: 1922 KYVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRWLAPG 1743
            KY VSC+LFLKYPKKHEGQLSARRS  VCNSTLHKLGTD  LQGYIRDGAFDPRRW+APG
Sbjct: 1101 KYAVSCHLFLKYPKKHEGQLSARRSWVVCNSTLHKLGTDRSLQGYIRDGAFDPRRWVAPG 1160

Query: 1742 QSSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEALIGAY 1563
            Q S+RPVPC CGVD  EVPL+ KF TED K VVGK+CDRGHRW+ SK+I+DC EALIGAY
Sbjct: 1161 QRSIRPVPCSCGVDALEVPLDGKFQTEDTKIVVGKSCDRGHRWMGSKTIADCVEALIGAY 1220

Query: 1562 YVGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYTFTMK 1383
            YVGGGL +A  +MKW GID E EP+L+D+AI  ASL  Y P+ + ++ LESKI Y F++K
Sbjct: 1221 YVGGGLNAALHLMKWFGIDVELEPSLVDEAIATASLRTYIPKANEIEILESKIGYEFSVK 1280

Query: 1382 GLLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLRSASV 1203
            GLLLEAITHA++QELG+ YCYQRLEFLGDSVLD+LIT HL+Q+H DIDPGELTDLRSASV
Sbjct: 1281 GLLLEAITHATEQELGVGYCYQRLEFLGDSVLDVLITWHLYQSHRDIDPGELTDLRSASV 1340

Query: 1202 NNESFAKACIRHDLQQHLQHCSGLLLEQITEYSKFISDHDR--SPFQNVKCPKVLGDLVE 1029
            NNESFA+  +R +LQQHLQHCSGLLL QI EY+K++S  D   +P Q+ K PK LGDLVE
Sbjct: 1341 NNESFAQVAVRRNLQQHLQHCSGLLLGQIKEYAKYLSGSDDVPNPLQSTKGPKALGDLVE 1400

Query: 1028 SIAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVCLQK 849
            SIAGAILIDT+LN++ VWRIFKPLLSPIVTP+KLELPP RELNELC   GYFIKE C  K
Sbjct: 1401 SIAGAILIDTKLNLNEVWRIFKPLLSPIVTPDKLELPPLRELNELCDSLGYFIKEKCTNK 1460

Query: 848  EDTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVSRK----- 684
             + VH ELRLQ+ DVLL GEGC R KK AKGQAA  LLK+LE RGIS+SR  S++     
Sbjct: 1461 GELVHAELRLQMIDVLLVGEGCGRNKKAAKGQAAAQLLKNLEKRGISYSRSNSKRRKQGA 1520

Query: 683  -------DFEMEVDSSIQDMNVDVNRKSIRYNXXXXXXXXXXTAGSPVLETSNTVPAVAQ 525
                      M  D+  Q  N D + + I+++            G  +   ++      +
Sbjct: 1521 DLVGVSSSLNMGGDACGQSNNED-SSELIKFHKKQKT------TGMQLCTRTSIANNCLE 1573

Query: 524  NSSN--LTPPATITINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGK 351
            N+    L  P   +IN KKGGPRSSLYELCKR+QWPMP+F+S EQRSR P+     S  +
Sbjct: 1574 NACKPKLDTPVIKSINMKKGGPRSSLYELCKRLQWPMPSFESKEQRSRFPIIFGEGSERR 1633

Query: 350  TCFNIFVSKIKLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTISD 186
              FN F+S I L++ + G +E  GD R DKKSS DSAAL ML+EL + G+  I D
Sbjct: 1634 EGFNSFISSISLHIPNCGVMECRGDHRADKKSSLDSAALVMLHELQRRGKLIIHD 1688


>ref|XP_010261808.1| PREDICTED: endoribonuclease Dicer homolog 3a isoform X2 [Nelumbo
            nucifera]
          Length = 1622

 Score =  841 bits (2172), Expect = 0.0
 Identities = 439/712 (61%), Positives = 529/712 (74%), Gaps = 23/712 (3%)
 Frame = -1

Query: 2258 LKQSHNPHNLLAKAKTQGG------------MATEKPLAFVHMPAELLVPINVSISVLKS 2115
            LKQSHNPHNLLAK+   GG            +  +K    VHMP ELL+ I++SISVLKS
Sbjct: 908  LKQSHNPHNLLAKSSQAGGSLCRKTSDAGTALIVDKLQNHVHMPPELLICIDISISVLKS 967

Query: 2114 FYLLPSLMHRLESLMLAIQLREEISCDRNIYHIPSSLILEALTSLRCCEAFSLERLELLG 1935
            FYLLPSLMHRLE+LML  QLR+EIS   +   I SSLILEALT+LRCCE FSLERLELLG
Sbjct: 968  FYLLPSLMHRLEALMLTSQLRDEISYHPSNGCISSSLILEALTTLRCCEKFSLERLELLG 1027

Query: 1934 DSVLKYVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRW 1755
            DSVLKY VSCNLFLKYPK+HEGQLSARRS AVCNSTLHKLGT+ K+QGYIRD AFDP RW
Sbjct: 1028 DSVLKYAVSCNLFLKYPKEHEGQLSARRSRAVCNSTLHKLGTNKKVQGYIRDSAFDPCRW 1087

Query: 1754 LAPGQSSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEAL 1575
             APGQ SLR VPC CG+DT EVPLE+KF TE+    VG+ CDRGHRW+CSK+ISDC EAL
Sbjct: 1088 AAPGQHSLRNVPCLCGLDTHEVPLERKFQTEETSVAVGRVCDRGHRWMCSKTISDCVEAL 1147

Query: 1574 IGAYYVGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYT 1395
            IGAY++GGGL +A  +MKWLG+D EF+P LID  I N+SLW   P+V+ L+ LE+K+ Y+
Sbjct: 1148 IGAYFIGGGLTAALSLMKWLGMDVEFDPILIDDVIRNSSLWSSMPKVNELETLETKLCYS 1207

Query: 1394 FTMKGLLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLR 1215
            F+ KGLLLEA+TH S +E G+ YCYQRLEFLGDSVLDLLIT HL+Q+H D+DPGELTDLR
Sbjct: 1208 FSAKGLLLEAVTHPSVEEPGVGYCYQRLEFLGDSVLDLLITCHLYQSHKDVDPGELTDLR 1267

Query: 1214 SASVNNESFAKACIRHDLQQHLQHCSGLLLEQITEYSKFISDHDRSPFQ-NVKCPKVLGD 1038
            SA+VNNE+FA+  +RH+LQQHLQH SGLLL QITEY K  S           K PKVLGD
Sbjct: 1268 SANVNNENFAQVAVRHNLQQHLQHGSGLLLTQITEYVKSASGPSNETMSLRAKVPKVLGD 1327

Query: 1037 LVESIAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVC 858
            LVESIAGAIL+DT+LN D VWRIFKPLLSPI+TP++LELPP RELNE C   GYFIKE C
Sbjct: 1328 LVESIAGAILMDTKLNTDEVWRIFKPLLSPIITPDRLELPPLRELNETCDSLGYFIKEKC 1387

Query: 857  LQKEDTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVSR-KD 681
              K + VH EL LQ+ED+LL GEGC+R KK AKGQAA YLLK+L++RGISHSR+ S+ K 
Sbjct: 1388 TNKGELVHAELWLQMEDILLIGEGCERSKKAAKGQAASYLLKELKERGISHSRYASKTKK 1447

Query: 680  FEMEV--DSSIQDMNVDVNRKSIRYNXXXXXXXXXXTAGSPVLETSNTV-PAVAQNSSN- 513
             E+E    SS+ D++++   +                    +L   +   P++A + S+ 
Sbjct: 1448 LELESVGGSSVPDLDINHCSQPNGGELVEPISYKKLKTIERLLPVESIADPSLAGDCSHK 1507

Query: 512  -----LTPPATITINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGKT 348
                 L+   TI+I+ +KGGPRSSLYELCKR  WPMP+  + E +SR P++  + S  + 
Sbjct: 1508 VSAPELSSSVTISISMQKGGPRSSLYELCKRQHWPMPSLHTIEHKSRLPIEFGDGSEKRK 1567

Query: 347  CFNIFVSKIKLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTI 192
             FN FVS+I L++ + G IE TG+   DKKSS DSAAL+ML+ELAK G+CTI
Sbjct: 1568 GFNSFVSRISLHIPNSGVIESTGNHSPDKKSSHDSAALSMLHELAKQGKCTI 1619


>ref|XP_010261807.1| PREDICTED: endoribonuclease Dicer homolog 3a isoform X1 [Nelumbo
            nucifera]
          Length = 1665

 Score =  839 bits (2168), Expect = 0.0
 Identities = 440/712 (61%), Positives = 531/712 (74%), Gaps = 23/712 (3%)
 Frame = -1

Query: 2258 LKQSHNPHNLLAKAKTQGG------------MATEKPLAFVHMPAELLVPINVSISVLKS 2115
            LKQSHNPHNLLAK+ +QGG            +  +K    VHMP ELL+ I++SISVLKS
Sbjct: 952  LKQSHNPHNLLAKS-SQGGSLCRKTSDAGTALIVDKLQNHVHMPPELLICIDISISVLKS 1010

Query: 2114 FYLLPSLMHRLESLMLAIQLREEISCDRNIYHIPSSLILEALTSLRCCEAFSLERLELLG 1935
            FYLLPSLMHRLE+LML  QLR+EIS   +   I SSLILEALT+LRCCE FSLERLELLG
Sbjct: 1011 FYLLPSLMHRLEALMLTSQLRDEISYHPSNGCISSSLILEALTTLRCCEKFSLERLELLG 1070

Query: 1934 DSVLKYVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRW 1755
            DSVLKY VSCNLFLKYPK+HEGQLSARRS AVCNSTLHKLGT+ K+QGYIRD AFDP RW
Sbjct: 1071 DSVLKYAVSCNLFLKYPKEHEGQLSARRSRAVCNSTLHKLGTNKKVQGYIRDSAFDPCRW 1130

Query: 1754 LAPGQSSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEAL 1575
             APGQ SLR VPC CG+DT EVPLE+KF TE+    VG+ CDRGHRW+CSK+ISDC EAL
Sbjct: 1131 AAPGQHSLRNVPCLCGLDTHEVPLERKFQTEETSVAVGRVCDRGHRWMCSKTISDCVEAL 1190

Query: 1574 IGAYYVGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYT 1395
            IGAY++GGGL +A  +MKWLG+D EF+P LID  I N+SLW   P+V+ L+ LE+K+ Y+
Sbjct: 1191 IGAYFIGGGLTAALSLMKWLGMDVEFDPILIDDVIRNSSLWSSMPKVNELETLETKLCYS 1250

Query: 1394 FTMKGLLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLR 1215
            F+ KGLLLEA+TH S +E G+ YCYQRLEFLGDSVLDLLIT HL+Q+H D+DPGELTDLR
Sbjct: 1251 FSAKGLLLEAVTHPSVEEPGVGYCYQRLEFLGDSVLDLLITCHLYQSHKDVDPGELTDLR 1310

Query: 1214 SASVNNESFAKACIRHDLQQHLQHCSGLLLEQITEYSKFISDHDRSPFQ-NVKCPKVLGD 1038
            SA+VNNE+FA+  +RH+LQQHLQH SGLLL QITEY K  S           K PKVLGD
Sbjct: 1311 SANVNNENFAQVAVRHNLQQHLQHGSGLLLTQITEYVKSASGPSNETMSLRAKVPKVLGD 1370

Query: 1037 LVESIAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVC 858
            LVESIAGAIL+DT+LN D VWRIFKPLLSPI+TP++LELPP RELNE C   GYFIKE C
Sbjct: 1371 LVESIAGAILMDTKLNTDEVWRIFKPLLSPIITPDRLELPPLRELNETCDSLGYFIKEKC 1430

Query: 857  LQKEDTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVSR-KD 681
              K + VH EL LQ+ED+LL GEGC+R KK AKGQAA YLLK+L++RGISHSR+ S+ K 
Sbjct: 1431 TNKGELVHAELWLQMEDILLIGEGCERSKKAAKGQAASYLLKELKERGISHSRYASKTKK 1490

Query: 680  FEMEV--DSSIQDMNVDVNRKSIRYNXXXXXXXXXXTAGSPVLETSNTV-PAVAQNSSN- 513
             E+E    SS+ D++++   +                    +L   +   P++A + S+ 
Sbjct: 1491 LELESVGGSSVPDLDINHCSQPNGGELVEPISYKKLKTIERLLPVESIADPSLAGDCSHK 1550

Query: 512  -----LTPPATITINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGKT 348
                 L+   TI+I+ +KGGPRSSLYELCKR  WPMP+  + E +SR P++  + S  + 
Sbjct: 1551 VSAPELSSSVTISISMQKGGPRSSLYELCKRQHWPMPSLHTIEHKSRLPIEFGDGSEKRK 1610

Query: 347  CFNIFVSKIKLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTI 192
             FN FVS+I L++ + G IE TG+   DKKSS DSAAL+ML+ELAK G+CTI
Sbjct: 1611 GFNSFVSRISLHIPNSGVIESTGNHSPDKKSSHDSAALSMLHELAKQGKCTI 1662


>ref|XP_010648400.1| PREDICTED: endoribonuclease Dicer homolog 3a isoform X1 [Vitis
            vinifera]
          Length = 1684

 Score =  838 bits (2166), Expect = 0.0
 Identities = 448/719 (62%), Positives = 524/719 (72%), Gaps = 28/719 (3%)
 Frame = -1

Query: 2258 LKQSHNPHNLLAKAKTQGG------------MATEKPLAFVHMPAELLVPINVSISVLKS 2115
            LKQSHN HNLL     +G             M  EK    VHMP ELLV I V I+VLKS
Sbjct: 974  LKQSHNAHNLLVNFNDEGDSSGGEALQTGQKMLNEKAQTHVHMPPELLVSIEVPITVLKS 1033

Query: 2114 FYLLPSLMHRLESLMLAIQLREEISCDRNIYHIPSSLILEALTSLRCCEAFSLERLELLG 1935
             YLLPSL+HRLESLMLA QLREEI+       I SSLILEA+T+LRC E+FS+ERLELLG
Sbjct: 1034 SYLLPSLIHRLESLMLASQLREEIAFTTGS-QISSSLILEAITTLRCSESFSMERLELLG 1092

Query: 1934 DSVLKYVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRW 1755
            DSVLKY VSC+LFLKYPKKHEGQLSARRS  VCNSTLHKLGTD  LQGYIRDGAFDPRRW
Sbjct: 1093 DSVLKYAVSCHLFLKYPKKHEGQLSARRSWVVCNSTLHKLGTDRSLQGYIRDGAFDPRRW 1152

Query: 1754 LAPGQSSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEAL 1575
            +APGQ S+RPVPC CGVD  EVPL+ KF TED K VVGK+CDRGHRW+ SK+I+DC EAL
Sbjct: 1153 VAPGQRSIRPVPCSCGVDALEVPLDGKFQTEDTKIVVGKSCDRGHRWMGSKTIADCVEAL 1212

Query: 1574 IGAYYVGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYT 1395
            IGAYYVGGGL +A  +MKW GID E EP+L+D+AI  ASL  Y P+ + ++ LESKI Y 
Sbjct: 1213 IGAYYVGGGLNAALHLMKWFGIDVELEPSLVDEAIATASLRTYIPKANEIEILESKIGYE 1272

Query: 1394 FTMKGLLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLR 1215
            F++KGLLLEAITHA++QELG+ YCYQRLEFLGDSVLD+LIT HL+Q+H DIDPGELTDLR
Sbjct: 1273 FSVKGLLLEAITHATEQELGVGYCYQRLEFLGDSVLDVLITWHLYQSHRDIDPGELTDLR 1332

Query: 1214 SASVNNESFAKACIRHDLQQHLQHCSGLLLEQITEYSKFISDHDR--SPFQNVKCPKVLG 1041
            SASVNNESFA+  +R +LQQHLQHCSGLLL QI EY+K++S  D   +P Q+ K PK LG
Sbjct: 1333 SASVNNESFAQVAVRRNLQQHLQHCSGLLLGQIKEYAKYLSGSDDVPNPLQSTKGPKALG 1392

Query: 1040 DLVESIAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEV 861
            DLVESIAGAILIDT+LN++ VWRIFKPLLSPIVTP+KLELPP RELNELC   GYFIKE 
Sbjct: 1393 DLVESIAGAILIDTKLNLNEVWRIFKPLLSPIVTPDKLELPPLRELNELCDSLGYFIKEK 1452

Query: 860  CLQKEDTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVSRK- 684
            C  K + VH ELRLQ+ DVLL GEGC R KK AKGQAA  LLK+LE RGIS+SR  S++ 
Sbjct: 1453 CTNKGELVHAELRLQMIDVLLVGEGCGRNKKAAKGQAAAQLLKNLEKRGISYSRSNSKRR 1512

Query: 683  -----------DFEMEVDSSIQDMNVDVNRKSIRYNXXXXXXXXXXTAGSPVLETSNTVP 537
                          M  D+  Q  N D + + I+++            G  +   ++   
Sbjct: 1513 KQGADLVGVSSSLNMGGDACGQSNNED-SSELIKFHKKQKT------TGMQLCTRTSIAN 1565

Query: 536  AVAQNSSN--LTPPATITINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNND 363
               +N+    L  P   +IN KKGGPRSSLYELCKR+QWPMP+F+S EQRSR P+     
Sbjct: 1566 NCLENACKPKLDTPVIKSINMKKGGPRSSLYELCKRLQWPMPSFESKEQRSRFPIIFGEG 1625

Query: 362  SGGKTCFNIFVSKIKLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTISD 186
            S  +  FN F+S I L++ + G +E  GD R DKKSS DSAAL ML+EL + G+  I D
Sbjct: 1626 SERREGFNSFISSISLHIPNCGVMECRGDHRADKKSSLDSAALVMLHELQRRGKLIIHD 1684


>ref|XP_008220598.1| PREDICTED: endoribonuclease Dicer homolog 3 [Prunus mume]
          Length = 1642

 Score =  823 bits (2126), Expect = 0.0
 Identities = 432/695 (62%), Positives = 511/695 (73%), Gaps = 6/695 (0%)
 Frame = -1

Query: 2258 LKQSHNPHNLLAKAKTQGGMATEKPLAFVHMPAELLVPINVSISVLKSFYLLPSLMHRLE 2079
            LKQSHNPHNLL     +GG   E+   +  MP ELLV I V   VLKSFYL+PSL+HRLE
Sbjct: 952  LKQSHNPHNLLVNFSGEGGGGIERQRMYAQMPPELLVSIGVQRFVLKSFYLMPSLIHRLE 1011

Query: 2078 SLMLAIQLREEISCDRNIYHIPSSLILEALTSLRCCEAFSLERLELLGDSVLKYVVSCNL 1899
            SLMLA QLRE+I C  + + I SSLILEALT+LRC E FS+ERLELLGDSVLKY VSC+L
Sbjct: 1012 SLMLASQLREDIDCHSSSFQISSSLILEALTTLRCNEDFSMERLELLGDSVLKYAVSCHL 1071

Query: 1898 FLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRWLAPGQSSLRPVP 1719
            FLKYP+KHEGQLS  R  A+CNS LHKLG + KLQGYIRDGAFDPRRW+APGQ SLRP P
Sbjct: 1072 FLKYPQKHEGQLSNLRQWAICNSNLHKLGINRKLQGYIRDGAFDPRRWVAPGQISLRPAP 1131

Query: 1718 CECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEALIGAYYVGGGLIS 1539
            C CGVDT EVP++ KF TEDPK VVGK+CD+GHRW+CSK+ISDC EALIGAYYV GGL +
Sbjct: 1132 CNCGVDTLEVPVDCKFQTEDPKVVVGKSCDKGHRWMCSKTISDCVEALIGAYYVSGGLPA 1191

Query: 1538 ACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYTFTMKGLLLEAIT 1359
            A  +MKW  ID+E EP+L+ +AI  ASL  Y P+ + +  LESK+ Y F+ KGLL EAIT
Sbjct: 1192 ALHLMKWFHIDAELEPSLVAEAITTASLRTYNPKANEIAILESKLHYEFSTKGLLHEAIT 1251

Query: 1358 HASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLRSASVNNESFAKA 1179
            HAS+QE G+  CY+RLEFLGDSVLDLLITRHL+ +HTDIDPGELTDLRSASVNNE+FA+ 
Sbjct: 1252 HASEQESGVGCCYERLEFLGDSVLDLLITRHLYDSHTDIDPGELTDLRSASVNNENFAQV 1311

Query: 1178 CIRHDLQQHLQHCSGLLLEQITEYSKFISDHDR-SPFQNVKCPKVLGDLVESIAGAILID 1002
             +R +LQQHLQH S LLL QITEY K  S+ D  +  Q  K PK LGD+VESIAGAILID
Sbjct: 1312 AVRQNLQQHLQHSSVLLLSQITEYVKSFSEPDNGTTLQGTKGPKALGDMVESIAGAILID 1371

Query: 1001 TRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVCLQKEDTVHVELR 822
            T LN+D VWRIFKPLLSPIVTP+KLELPP REL ELC   GYFIKE C +K +TVHV+L 
Sbjct: 1372 TELNLDEVWRIFKPLLSPIVTPDKLELPPLRELIELCDSLGYFIKETCTKKGETVHVKLT 1431

Query: 821  LQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVSRKDFEME--VDSSIQD 648
            +QL+D LL GEGCDR KK AKG+AA +LLK+LE R IS+S    ++    E   DSS+ D
Sbjct: 1432 VQLKDDLLIGEGCDRTKKAAKGEAARHLLKELEKRDISYSWCSKKRKLGSEGVGDSSLLD 1491

Query: 647  MNVDVNRKSIRYNXXXXXXXXXXTAGSPVLETSNTVPAVAQ---NSSNLTPPATITINKK 477
            +N +V  +                      E +   P V++   +SSN T P   +IN K
Sbjct: 1492 INYNVCSQV----NVEDSSERVIYKKKRTTERTGVFPLVSESKTSSSNDTAPVIKSINMK 1547

Query: 476  KGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGKTCFNIFVSKIKLYVTDFG 297
            KGGPR+S YELCK+ QW  P F+S+E +SRTP+      G    F+ FVSKI L++ +FG
Sbjct: 1548 KGGPRTSFYELCKKQQWKRPDFESSETKSRTPIDFG--EGSSAHFSSFVSKITLHIPNFG 1605

Query: 296  PIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTI 192
             IE TGD R DKKSS+DSAAL MLYEL + G+  I
Sbjct: 1606 DIECTGDARPDKKSSEDSAALAMLYELERQGKLII 1640


>ref|XP_007012462.1| Endoribonuclease Dicera, putative isoform 2 [Theobroma cacao]
            gi|508782825|gb|EOY30081.1| Endoribonuclease Dicera,
            putative isoform 2 [Theobroma cacao]
          Length = 1255

 Score =  816 bits (2108), Expect = 0.0
 Identities = 440/709 (62%), Positives = 522/709 (73%), Gaps = 18/709 (2%)
 Frame = -1

Query: 2258 LKQSHNPHNLL---------AKAKTQGGMATEKPLAFVHMPAELLVPINVSISVLKSFYL 2106
            LKQSHNPHNLL         AKA +Q G+  EKP   VHMP ELL+ ++V I VLK+FYL
Sbjct: 566  LKQSHNPHNLLVNFNDEGVSAKA-SQAGLVNEKPRNHVHMPPELLLVLDVPIDVLKAFYL 624

Query: 2105 LPSLMHRLESLMLAIQLREEISCDRNIYHIPSSLILEALTSLRCCEAFSLERLELLGDSV 1926
            LPSLMHRLESLMLA QLREEI+   + + IPSSLILEALT+LRCCE+FS+ERLELLGDSV
Sbjct: 625  LPSLMHRLESLMLASQLREEINFHSSNFDIPSSLILEALTTLRCCESFSMERLELLGDSV 684

Query: 1925 LKYVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRWLAP 1746
            LKY VSC+LFL+YPK HEGQLSA+RS AVCNSTLHKLGTD +LQGYIRD AFDPRRW+AP
Sbjct: 685  LKYAVSCHLFLRYPKNHEGQLSAKRSWAVCNSTLHKLGTDRRLQGYIRDSAFDPRRWVAP 744

Query: 1745 GQSSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEALIGA 1566
            GQ SLRPVPC+CGVD+ EVPL+KKF TEDPK  VGK+CDRGHRW+CSK+ISDC EALIGA
Sbjct: 745  GQLSLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKSCDRGHRWMCSKTISDCVEALIGA 804

Query: 1565 YYVGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYTFTM 1386
            YY+ GGLI+A  MMKWLGID+E +PAL+ +AI  AS+  Y P  D +  +E K+ Y F+ 
Sbjct: 805  YYISGGLIAALHMMKWLGIDAEVDPALVVEAIRCASVRTYVP-TDEIHIIELKMGYNFSS 863

Query: 1385 KGLLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLRSAS 1206
            K  L EA+THAS   +G  YCYQRLEFLGDSVLDLLIT++L+  HTDIDPGELTDLRSAS
Sbjct: 864  KFFLQEALTHAS---VGEFYCYQRLEFLGDSVLDLLITQYLYHNHTDIDPGELTDLRSAS 920

Query: 1205 VNNESFAKACIRHDLQQHLQHCSGLLLEQITEY-SKFISDHDR-SPFQNVKCPKVLGDLV 1032
            VNNESFA+  +RHDL +HLQHCS LL  QI+EY   F   HD       +K PK LGDLV
Sbjct: 921  VNNESFAQVAVRHDLHKHLQHCSTLLSNQISEYVQSFPESHDTIRSGPGIKGPKALGDLV 980

Query: 1031 ESIAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVCLQ 852
            ESI GAILIDT LN++ VWRI +PLLSPIVTP+KLELPP RELNELC   GYFIKE C+ 
Sbjct: 981  ESIVGAILIDTNLNLNEVWRIVEPLLSPIVTPDKLELPPLRELNELCDSLGYFIKEKCIY 1040

Query: 851  KEDTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVSRKDFEM 672
              + VH +L+LQL+D+LL GEG DR +K AKG+AA YLLK+LE+RGIS  R   RK    
Sbjct: 1041 NGEIVHAKLQLQLDDILLIGEGFDRIRKVAKGKAASYLLKELENRGISRKR---RKQGCA 1097

Query: 671  EVDSSIQDMNVD-VNRKSIRYNXXXXXXXXXXTAGSPVLETSNTVPAVAQNSS----NLT 507
            +   +  D +++  N K  R             A   +LE S TVP+   +SS    + T
Sbjct: 1098 DSTQTTDDDSLEPTNHKRQR------------RAKIQLLEDSTTVPSPTHDSSKRACSTT 1145

Query: 506  PPATI--TINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGKTCFNIF 333
            PP  +  TIN KKGGPR++L+ELCK++ WPMPTF +TE +S T V++   +  K  F  F
Sbjct: 1146 PPTPVIATINTKKGGPRTALFELCKKLLWPMPTFTATEHKSSTLVEIGEGTERKKGFISF 1205

Query: 332  VSKIKLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTISD 186
            VS I L +  FG IE TGD R DKKSS DSAAL MLYEL + G+  I +
Sbjct: 1206 VSNITLNIPRFGTIECTGDARADKKSSLDSAALVMLYELEQRGKLIIGE 1254


>ref|XP_007012461.1| Ribonuclease III, putative isoform 1 [Theobroma cacao]
            gi|508782824|gb|EOY30080.1| Ribonuclease III, putative
            isoform 1 [Theobroma cacao]
          Length = 1639

 Score =  816 bits (2108), Expect = 0.0
 Identities = 440/709 (62%), Positives = 522/709 (73%), Gaps = 18/709 (2%)
 Frame = -1

Query: 2258 LKQSHNPHNLL---------AKAKTQGGMATEKPLAFVHMPAELLVPINVSISVLKSFYL 2106
            LKQSHNPHNLL         AKA +Q G+  EKP   VHMP ELL+ ++V I VLK+FYL
Sbjct: 950  LKQSHNPHNLLVNFNDEGVSAKA-SQAGLVNEKPRNHVHMPPELLLVLDVPIDVLKAFYL 1008

Query: 2105 LPSLMHRLESLMLAIQLREEISCDRNIYHIPSSLILEALTSLRCCEAFSLERLELLGDSV 1926
            LPSLMHRLESLMLA QLREEI+   + + IPSSLILEALT+LRCCE+FS+ERLELLGDSV
Sbjct: 1009 LPSLMHRLESLMLASQLREEINFHSSNFDIPSSLILEALTTLRCCESFSMERLELLGDSV 1068

Query: 1925 LKYVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRWLAP 1746
            LKY VSC+LFL+YPK HEGQLSA+RS AVCNSTLHKLGTD +LQGYIRD AFDPRRW+AP
Sbjct: 1069 LKYAVSCHLFLRYPKNHEGQLSAKRSWAVCNSTLHKLGTDRRLQGYIRDSAFDPRRWVAP 1128

Query: 1745 GQSSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEALIGA 1566
            GQ SLRPVPC+CGVD+ EVPL+KKF TEDPK  VGK+CDRGHRW+CSK+ISDC EALIGA
Sbjct: 1129 GQLSLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKSCDRGHRWMCSKTISDCVEALIGA 1188

Query: 1565 YYVGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYTFTM 1386
            YY+ GGLI+A  MMKWLGID+E +PAL+ +AI  AS+  Y P  D +  +E K+ Y F+ 
Sbjct: 1189 YYISGGLIAALHMMKWLGIDAEVDPALVVEAIRCASVRTYVP-TDEIHIIELKMGYNFSS 1247

Query: 1385 KGLLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLRSAS 1206
            K  L EA+THAS   +G  YCYQRLEFLGDSVLDLLIT++L+  HTDIDPGELTDLRSAS
Sbjct: 1248 KFFLQEALTHAS---VGEFYCYQRLEFLGDSVLDLLITQYLYHNHTDIDPGELTDLRSAS 1304

Query: 1205 VNNESFAKACIRHDLQQHLQHCSGLLLEQITEY-SKFISDHDR-SPFQNVKCPKVLGDLV 1032
            VNNESFA+  +RHDL +HLQHCS LL  QI+EY   F   HD       +K PK LGDLV
Sbjct: 1305 VNNESFAQVAVRHDLHKHLQHCSTLLSNQISEYVQSFPESHDTIRSGPGIKGPKALGDLV 1364

Query: 1031 ESIAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVCLQ 852
            ESI GAILIDT LN++ VWRI +PLLSPIVTP+KLELPP RELNELC   GYFIKE C+ 
Sbjct: 1365 ESIVGAILIDTNLNLNEVWRIVEPLLSPIVTPDKLELPPLRELNELCDSLGYFIKEKCIY 1424

Query: 851  KEDTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVSRKDFEM 672
              + VH +L+LQL+D+LL GEG DR +K AKG+AA YLLK+LE+RGIS  R   RK    
Sbjct: 1425 NGEIVHAKLQLQLDDILLIGEGFDRIRKVAKGKAASYLLKELENRGISRKR---RKQGCA 1481

Query: 671  EVDSSIQDMNVD-VNRKSIRYNXXXXXXXXXXTAGSPVLETSNTVPAVAQNSS----NLT 507
            +   +  D +++  N K  R             A   +LE S TVP+   +SS    + T
Sbjct: 1482 DSTQTTDDDSLEPTNHKRQR------------RAKIQLLEDSTTVPSPTHDSSKRACSTT 1529

Query: 506  PPATI--TINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGKTCFNIF 333
            PP  +  TIN KKGGPR++L+ELCK++ WPMPTF +TE +S T V++   +  K  F  F
Sbjct: 1530 PPTPVIATINTKKGGPRTALFELCKKLLWPMPTFTATEHKSSTLVEIGEGTERKKGFISF 1589

Query: 332  VSKIKLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTISD 186
            VS I L +  FG IE TGD R DKKSS DSAAL MLYEL + G+  I +
Sbjct: 1590 VSNITLNIPRFGTIECTGDARADKKSSLDSAALVMLYELEQRGKLIIGE 1638


>ref|XP_010049290.1| PREDICTED: endoribonuclease Dicer homolog 3 isoform X1 [Eucalyptus
            grandis]
          Length = 1686

 Score =  803 bits (2073), Expect = 0.0
 Identities = 420/710 (59%), Positives = 525/710 (73%), Gaps = 18/710 (2%)
 Frame = -1

Query: 2258 LKQSHNPHNLLA-------KAKTQGGMATEKPLAFVHMPAELLVPINVSISVLKSFYLLP 2100
            LKQSHNP+NLL        K K       EKPL  V+MP ELL+ ++V +  +K+FYLLP
Sbjct: 980  LKQSHNPYNLLVNFVEKGRKGKASQPGCVEKPLNHVYMPPELLLTVDVPVYAMKAFYLLP 1039

Query: 2099 SLMHRLESLMLAIQLREEISCDRNIYHIPSSLILEALTSLRCCEAFSLERLELLGDSVLK 1920
            SL+HRLESLMLA QLR EI+C     H+PSSLILEALT+LRCCE+FS+ERLELLGDSVLK
Sbjct: 1040 SLLHRLESLMLASQLRGEINCP---IHVPSSLILEALTTLRCCESFSMERLELLGDSVLK 1096

Query: 1919 YVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRWLAPGQ 1740
            Y VS +LFLKYP+KHEGQLSA+RS AVCN+TLHK GTDC+LQGYIRD AFDPRRW+APGQ
Sbjct: 1097 YAVSNHLFLKYPEKHEGQLSAQRSLAVCNATLHKRGTDCQLQGYIRDSAFDPRRWVAPGQ 1156

Query: 1739 SSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEALIGAYY 1560
             +L P PC CGVDT  VPL+ KF+TEDPK VVGK CDRGHRW+ SK+ISDC EALIGA+Y
Sbjct: 1157 RTLFPCPCSCGVDTPNVPLDIKFSTEDPKIVVGKCCDRGHRWMGSKTISDCLEALIGAFY 1216

Query: 1559 VGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYTFTMKG 1380
            V GGLI+A  M KWLGID+E + + + +AI +A+L  +    D L  LESKI Y F++KG
Sbjct: 1217 VSGGLIAALHMNKWLGIDTEVDSSSVVEAINSAALHSFVLSTDDLDILESKIGYNFSVKG 1276

Query: 1379 LLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLRSASVN 1200
            LL EAITHAS QE GL YCYQRLEFLGDSVLD+LIT +L+Q+H D+DPGELTDLRSASVN
Sbjct: 1277 LLQEAITHASCQEQGLPYCYQRLEFLGDSVLDILITWYLYQSHADVDPGELTDLRSASVN 1336

Query: 1199 NESFAKACIRHDLQQHLQHCSGLLLEQITEYSKFIS--DHDRSPFQNVKCPKVLGDLVES 1026
            NE+FA+  +RH+ ++HLQHCS  L  QI EY +  +  + D    Q++K PK LGD+VES
Sbjct: 1337 NENFAQVAVRHNFEKHLQHCSTSLQSQIMEYVQSFNRPEIDTRDLQHMKGPKALGDMVES 1396

Query: 1025 IAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVCLQKE 846
            IAGAILIDT+LN+D VWRIFKPLLSPIVTP+KLELPP+RELNELC H GYF+KE C+ K 
Sbjct: 1397 IAGAILIDTKLNLDEVWRIFKPLLSPIVTPDKLELPPWRELNELCDHLGYFVKENCVNKG 1456

Query: 845  DTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVS-RKDFEME 669
            +TVH E+RL+L+D  L G+G +R KK AKG+AAL+LLK LE RGIS ++ V+ +K    E
Sbjct: 1457 ETVHAEIRLRLDDDELFGQGYERCKKDAKGKAALHLLKQLEKRGISFNKSVAKKKKHSSE 1516

Query: 668  VDSSIQDMNVDVNRKSIRYN---XXXXXXXXXXTAGS--PVLETSNTVP---AVAQNSSN 513
             D+ +  +   V++ S   +             T+GS  P       VP   +V +++ +
Sbjct: 1517 DDADLSPLQAMVDKDSHGMDGDISGPEPCKKQRTSGSQLPKEADGKIVPVDCSVKESNFD 1576

Query: 512  LTPPATITINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGKTCFNIF 333
             + P  +TIN KKGGPRSSL+ELC+++ WPMP F++TEQ+S+TP++    +  K  F+ F
Sbjct: 1577 SSEPVLVTINMKKGGPRSSLFELCRKLLWPMPKFETTEQKSKTPIEFGEGAEKKVGFSSF 1636

Query: 332  VSKIKLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTISDQ 183
             SKI L++  FG +E TGD + DKKSS DSA LT+  EL K GR  I+ +
Sbjct: 1637 TSKIILHIPKFGDMESTGDPKADKKSSFDSAVLTIFNELEKQGRIIIAKE 1686


>ref|XP_010049291.1| PREDICTED: endoribonuclease Dicer homolog 3 isoform X2 [Eucalyptus
            grandis] gi|629117142|gb|KCW81817.1| hypothetical protein
            EUGRSUZ_C03173 [Eucalyptus grandis]
          Length = 1680

 Score =  803 bits (2073), Expect = 0.0
 Identities = 420/710 (59%), Positives = 525/710 (73%), Gaps = 18/710 (2%)
 Frame = -1

Query: 2258 LKQSHNPHNLLA-------KAKTQGGMATEKPLAFVHMPAELLVPINVSISVLKSFYLLP 2100
            LKQSHNP+NLL        K K       EKPL  V+MP ELL+ ++V +  +K+FYLLP
Sbjct: 974  LKQSHNPYNLLVNFVEKGRKGKASQPGCVEKPLNHVYMPPELLLTVDVPVYAMKAFYLLP 1033

Query: 2099 SLMHRLESLMLAIQLREEISCDRNIYHIPSSLILEALTSLRCCEAFSLERLELLGDSVLK 1920
            SL+HRLESLMLA QLR EI+C     H+PSSLILEALT+LRCCE+FS+ERLELLGDSVLK
Sbjct: 1034 SLLHRLESLMLASQLRGEINCP---IHVPSSLILEALTTLRCCESFSMERLELLGDSVLK 1090

Query: 1919 YVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRWLAPGQ 1740
            Y VS +LFLKYP+KHEGQLSA+RS AVCN+TLHK GTDC+LQGYIRD AFDPRRW+APGQ
Sbjct: 1091 YAVSNHLFLKYPEKHEGQLSAQRSLAVCNATLHKRGTDCQLQGYIRDSAFDPRRWVAPGQ 1150

Query: 1739 SSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEALIGAYY 1560
             +L P PC CGVDT  VPL+ KF+TEDPK VVGK CDRGHRW+ SK+ISDC EALIGA+Y
Sbjct: 1151 RTLFPCPCSCGVDTPNVPLDIKFSTEDPKIVVGKCCDRGHRWMGSKTISDCLEALIGAFY 1210

Query: 1559 VGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYTFTMKG 1380
            V GGLI+A  M KWLGID+E + + + +AI +A+L  +    D L  LESKI Y F++KG
Sbjct: 1211 VSGGLIAALHMNKWLGIDTEVDSSSVVEAINSAALHSFVLSTDDLDILESKIGYNFSVKG 1270

Query: 1379 LLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLRSASVN 1200
            LL EAITHAS QE GL YCYQRLEFLGDSVLD+LIT +L+Q+H D+DPGELTDLRSASVN
Sbjct: 1271 LLQEAITHASCQEQGLPYCYQRLEFLGDSVLDILITWYLYQSHADVDPGELTDLRSASVN 1330

Query: 1199 NESFAKACIRHDLQQHLQHCSGLLLEQITEYSKFIS--DHDRSPFQNVKCPKVLGDLVES 1026
            NE+FA+  +RH+ ++HLQHCS  L  QI EY +  +  + D    Q++K PK LGD+VES
Sbjct: 1331 NENFAQVAVRHNFEKHLQHCSTSLQSQIMEYVQSFNRPEIDTRDLQHMKGPKALGDMVES 1390

Query: 1025 IAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVCLQKE 846
            IAGAILIDT+LN+D VWRIFKPLLSPIVTP+KLELPP+RELNELC H GYF+KE C+ K 
Sbjct: 1391 IAGAILIDTKLNLDEVWRIFKPLLSPIVTPDKLELPPWRELNELCDHLGYFVKENCVNKG 1450

Query: 845  DTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVS-RKDFEME 669
            +TVH E+RL+L+D  L G+G +R KK AKG+AAL+LLK LE RGIS ++ V+ +K    E
Sbjct: 1451 ETVHAEIRLRLDDDELFGQGYERCKKDAKGKAALHLLKQLEKRGISFNKSVAKKKKHSSE 1510

Query: 668  VDSSIQDMNVDVNRKSIRYN---XXXXXXXXXXTAGS--PVLETSNTVP---AVAQNSSN 513
             D+ +  +   V++ S   +             T+GS  P       VP   +V +++ +
Sbjct: 1511 DDADLSPLQAMVDKDSHGMDGDISGPEPCKKQRTSGSQLPKEADGKIVPVDCSVKESNFD 1570

Query: 512  LTPPATITINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGKTCFNIF 333
             + P  +TIN KKGGPRSSL+ELC+++ WPMP F++TEQ+S+TP++    +  K  F+ F
Sbjct: 1571 SSEPVLVTINMKKGGPRSSLFELCRKLLWPMPKFETTEQKSKTPIEFGEGAEKKVGFSSF 1630

Query: 332  VSKIKLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTISDQ 183
             SKI L++  FG +E TGD + DKKSS DSA LT+  EL K GR  I+ +
Sbjct: 1631 TSKIILHIPKFGDMESTGDPKADKKSSFDSAVLTIFNELEKQGRIIIAKE 1680


>ref|XP_009359046.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Pyrus x
            bretschneideri]
          Length = 1655

 Score =  790 bits (2041), Expect = 0.0
 Identities = 424/703 (60%), Positives = 499/703 (70%), Gaps = 14/703 (1%)
 Frame = -1

Query: 2258 LKQSHNPHNLLAKAKTQGG--------MATEKPLAFVHMPAELLVPINVSISVLKSFYLL 2103
            LKQSHNPHNLL     +GG        +   K   + HMP ELLV I V   VLKS YLL
Sbjct: 954  LKQSHNPHNLLVNFNGEGGNGKTLQSGVVIGKQRMYAHMPPELLVTIGVPRDVLKSCYLL 1013

Query: 2102 PSLMHRLESLMLAIQLREEISCDRNIYHIPSSLILEALTSLRCCEAFSLERLELLGDSVL 1923
            PSL+HRLESLMLA QLREEI+   + + I SSLILEALT+LRC + FS+ERLELLGDS+L
Sbjct: 1014 PSLIHRLESLMLAGQLREEINYHCSSFGISSSLILEALTTLRCNDDFSMERLELLGDSIL 1073

Query: 1922 KYVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRWLAPG 1743
            KY VSC+LFLKYPKKHEGQL+  R   +CNS LH+LG + KLQGYIRDGAFDP RW+APG
Sbjct: 1074 KYTVSCHLFLKYPKKHEGQLTNYRMLTICNSNLHRLGMNRKLQGYIRDGAFDPCRWVAPG 1133

Query: 1742 QSSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEALIGAY 1563
            Q SLRPVPC CGV+T EVPL+ KF TEDPK VVGK+CD+GHRW+CSK+ISDC EALIGAY
Sbjct: 1134 QISLRPVPCNCGVETLEVPLDSKFQTEDPKVVVGKSCDKGHRWMCSKTISDCVEALIGAY 1193

Query: 1562 YVGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYTFTMK 1383
            YV GGL +A  +MKWL ID E EP+L+  AI  ASL  Y  + + +  LESK+ Y F+ K
Sbjct: 1194 YVAGGLPAALHVMKWLDIDVELEPSLVADAIMTASLHPYTSKANEIAVLESKLHYEFSTK 1253

Query: 1382 GLLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLRSASV 1203
            GLLLEA+THAS QE G  YCY+RLEFLGDSVLDLLITRHL+ +HTDIDPGELTDLRSASV
Sbjct: 1254 GLLLEAMTHASDQESGGGYCYERLEFLGDSVLDLLITRHLYHSHTDIDPGELTDLRSASV 1313

Query: 1202 NNESFAKACIRHDLQQHLQHCSGLLLEQITEYSKFISDHDR-SPFQNVKCPKVLGDLVES 1026
            NNESFA+  +RHDLQQHLQH S LLL QITEY K +S+ D  +  Q  K PK LGD+VES
Sbjct: 1314 NNESFAQVAVRHDLQQHLQHASMLLLSQITEYVKSLSEPDNGTTLQGTKGPKALGDMVES 1373

Query: 1025 IAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVCLQKE 846
            IAGAILIDT+LN+D VWRIF+PLLSPIVTP+KLELPP REL ELC   GY+ KE C  K 
Sbjct: 1374 IAGAILIDTKLNLDEVWRIFEPLLSPIVTPDKLELPPLRELIELCDLFGYYKKEKCTNKG 1433

Query: 845  DTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVSRKDFEMEV 666
            +TVH EL +QL+DVLL GEGCDR KK AKG+AA  LLK LE+RGIS S+   + D +   
Sbjct: 1434 ETVHAELTVQLKDVLLTGEGCDRTKKGAKGEAARRLLKKLEERGISFSKK-RKLDADQLG 1492

Query: 665  DSSIQDMNVDVN-----RKSIRYNXXXXXXXXXXTAGSPVLETSNTVPAVAQNSSNLTPP 501
            DSS  D+N  V+     + S                  P    S +V A   +S N   P
Sbjct: 1493 DSSSLDINHKVSDQVTVKDSSALMVYKRRKTTEMPLAVPPTGVSPSVIARKTSSPNNAAP 1552

Query: 500  ATITINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGKTCFNIFVSKI 321
                IN KKGGPRS+L+ LC + QWP P F  TE +SRTP+     S     FN FV+++
Sbjct: 1553 VIKAINMKKGGPRSALFALCMKQQWPKPGFKITETQSRTPITFGESS--TKYFNSFVAQV 1610

Query: 320  KLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTI 192
             L++ + G IE TGD R DK SS+DSAA+ +  EL + GR  I
Sbjct: 1611 TLHIPNSGVIECTGDARPDKGSSEDSAAVVLFQELQRQGRVVI 1653


>ref|XP_012450063.1| PREDICTED: endoribonuclease Dicer homolog 3 isoform X6 [Gossypium
            raimondii]
          Length = 1673

 Score =  789 bits (2038), Expect = 0.0
 Identities = 423/707 (59%), Positives = 511/707 (72%), Gaps = 16/707 (2%)
 Frame = -1

Query: 2258 LKQSHNPHNLL---------AKAKTQGGMATEKPLAFVHMPAELLVPINVSISVLKSFYL 2106
            LKQSHNPHNLL         AKA +Q G+  EKP   VHMP ELL+ ++V +SVLKS YL
Sbjct: 994  LKQSHNPHNLLVNFNDEGVSAKA-SQAGVVNEKPRFHVHMPPELLLVLDVPVSVLKSLYL 1052

Query: 2105 LPSLMHRLESLMLAIQLREEIS-CDRNIYHIPSSLILEALTSLRCCEAFSLERLELLGDS 1929
            LPSLMHRLESLMLA QLREEI+ C  NI  IPSS+ILEALT+LRCCE+FS+ERLELLGDS
Sbjct: 1053 LPSLMHRLESLMLANQLREEINFCSSNI-DIPSSMILEALTTLRCCESFSMERLELLGDS 1111

Query: 1928 VLKYVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRWLA 1749
            VLKY VSC+LFL+YP KHEGQLSARRS AVCNSTLHKLGTD K+QGYIRD AFDPRRW+A
Sbjct: 1112 VLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNSTLHKLGTDHKIQGYIRDSAFDPRRWVA 1171

Query: 1748 PGQSSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEALIG 1569
            PGQ  LRPVPC+CGVD+ EVPL+KKF TEDPK  VGK+CDRGHRW+CSK+ISDC EALIG
Sbjct: 1172 PGQRVLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKSCDRGHRWLCSKTISDCVEALIG 1231

Query: 1568 AYYVGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYTFT 1389
            AYY+ GGL++A  +MKWLGID+E +P ++ + I  ASL  Y P  ++   +ESK+ Y F+
Sbjct: 1232 AYYLSGGLVAALHVMKWLGIDAELDPLVVAEVINQASLRTYVPNYEI-HMIESKVGYNFS 1290

Query: 1388 MKGLLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLRSA 1209
            +K  L EA+TH S  E    YCYQRLEFLGDSVLDLLIT++L+  HTDIDPGELTDLRSA
Sbjct: 1291 VKFFLQEALTHESLHE---SYCYQRLEFLGDSVLDLLITQYLYNHHTDIDPGELTDLRSA 1347

Query: 1208 SVNNESFAKACIRHDLQQHLQHCSGLLLEQITEYSKFISDHDRSP--FQNVKCPKVLGDL 1035
            SVNNE+FA+  +RHDL +HLQHCS LL  QI+EY +  ++ D +     ++K PK LGDL
Sbjct: 1348 SVNNENFAQVAVRHDLHKHLQHCSTLLSNQISEYVRSFTESDNTTRLDPSIKGPKALGDL 1407

Query: 1034 VESIAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVCL 855
            VESI GAILIDT LN+D VWRI +PLLSPIVTP+KLELPP+RELNELC   GYFIKE C 
Sbjct: 1408 VESIVGAILIDTNLNLDKVWRIVEPLLSPIVTPDKLELPPFRELNELCDSLGYFIKEKCK 1467

Query: 854  QKEDTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVSRKDFE 675
             K + VH EL LQL+  LL GEG DR +K AKG+AA  LLKDLE+RGI      SRK  +
Sbjct: 1468 NKGEVVHAELLLQLDHDLLVGEGFDRSRKVAKGKAASCLLKDLENRGI------SRKKRK 1521

Query: 674  MEVDSSIQDMNVDVNRKSIRYNXXXXXXXXXXTAGSPVLETSNTVPAV--AQNSSNLTP- 504
             +   S Q M  D    +I                 P  + S  +  +  ++ + + TP 
Sbjct: 1522 HDCVDSSQTMEDDSLEPTI-----------------PKRQRSAEIQLLDESKKACSATPA 1564

Query: 503  -PATITINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGKTCFNIFVS 327
             P  +T+  KKGGPR++L+ELCK++ WPMP+  +TE +S  P+++      K  F  FVS
Sbjct: 1565 TPVIVTVKTKKGGPRTTLFELCKKLLWPMPSIKATEHKSSAPMEIGEGPERKKGFISFVS 1624

Query: 326  KIKLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTISD 186
            KI L V  +  IE TGD + DKKSS DSAAL MLYEL + G+  I +
Sbjct: 1625 KIILNVPGYDIIECTGDAKADKKSSSDSAALFMLYELEQRGKLIIEE 1671


>ref|XP_012450062.1| PREDICTED: endoribonuclease Dicer homolog 3 isoform X5 [Gossypium
            raimondii]
          Length = 1677

 Score =  789 bits (2038), Expect = 0.0
 Identities = 423/707 (59%), Positives = 511/707 (72%), Gaps = 16/707 (2%)
 Frame = -1

Query: 2258 LKQSHNPHNLL---------AKAKTQGGMATEKPLAFVHMPAELLVPINVSISVLKSFYL 2106
            LKQSHNPHNLL         AKA +Q G+  EKP   VHMP ELL+ ++V +SVLKS YL
Sbjct: 998  LKQSHNPHNLLVNFNDEGVSAKA-SQAGVVNEKPRFHVHMPPELLLVLDVPVSVLKSLYL 1056

Query: 2105 LPSLMHRLESLMLAIQLREEIS-CDRNIYHIPSSLILEALTSLRCCEAFSLERLELLGDS 1929
            LPSLMHRLESLMLA QLREEI+ C  NI  IPSS+ILEALT+LRCCE+FS+ERLELLGDS
Sbjct: 1057 LPSLMHRLESLMLANQLREEINFCSSNI-DIPSSMILEALTTLRCCESFSMERLELLGDS 1115

Query: 1928 VLKYVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRWLA 1749
            VLKY VSC+LFL+YP KHEGQLSARRS AVCNSTLHKLGTD K+QGYIRD AFDPRRW+A
Sbjct: 1116 VLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNSTLHKLGTDHKIQGYIRDSAFDPRRWVA 1175

Query: 1748 PGQSSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEALIG 1569
            PGQ  LRPVPC+CGVD+ EVPL+KKF TEDPK  VGK+CDRGHRW+CSK+ISDC EALIG
Sbjct: 1176 PGQRVLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKSCDRGHRWLCSKTISDCVEALIG 1235

Query: 1568 AYYVGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYTFT 1389
            AYY+ GGL++A  +MKWLGID+E +P ++ + I  ASL  Y P  ++   +ESK+ Y F+
Sbjct: 1236 AYYLSGGLVAALHVMKWLGIDAELDPLVVAEVINQASLRTYVPNYEI-HMIESKVGYNFS 1294

Query: 1388 MKGLLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLRSA 1209
            +K  L EA+TH S  E    YCYQRLEFLGDSVLDLLIT++L+  HTDIDPGELTDLRSA
Sbjct: 1295 VKFFLQEALTHESLHE---SYCYQRLEFLGDSVLDLLITQYLYNHHTDIDPGELTDLRSA 1351

Query: 1208 SVNNESFAKACIRHDLQQHLQHCSGLLLEQITEYSKFISDHDRSP--FQNVKCPKVLGDL 1035
            SVNNE+FA+  +RHDL +HLQHCS LL  QI+EY +  ++ D +     ++K PK LGDL
Sbjct: 1352 SVNNENFAQVAVRHDLHKHLQHCSTLLSNQISEYVRSFTESDNTTRLDPSIKGPKALGDL 1411

Query: 1034 VESIAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVCL 855
            VESI GAILIDT LN+D VWRI +PLLSPIVTP+KLELPP+RELNELC   GYFIKE C 
Sbjct: 1412 VESIVGAILIDTNLNLDKVWRIVEPLLSPIVTPDKLELPPFRELNELCDSLGYFIKEKCK 1471

Query: 854  QKEDTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVSRKDFE 675
             K + VH EL LQL+  LL GEG DR +K AKG+AA  LLKDLE+RGI      SRK  +
Sbjct: 1472 NKGEVVHAELLLQLDHDLLVGEGFDRSRKVAKGKAASCLLKDLENRGI------SRKKRK 1525

Query: 674  MEVDSSIQDMNVDVNRKSIRYNXXXXXXXXXXTAGSPVLETSNTVPAV--AQNSSNLTP- 504
             +   S Q M  D    +I                 P  + S  +  +  ++ + + TP 
Sbjct: 1526 HDCVDSSQTMEDDSLEPTI-----------------PKRQRSAEIQLLDESKKACSATPA 1568

Query: 503  -PATITINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGKTCFNIFVS 327
             P  +T+  KKGGPR++L+ELCK++ WPMP+  +TE +S  P+++      K  F  FVS
Sbjct: 1569 TPVIVTVKTKKGGPRTTLFELCKKLLWPMPSIKATEHKSSAPMEIGEGPERKKGFISFVS 1628

Query: 326  KIKLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTISD 186
            KI L V  +  IE TGD + DKKSS DSAAL MLYEL + G+  I +
Sbjct: 1629 KIILNVPGYDIIECTGDAKADKKSSSDSAALFMLYELEQRGKLIIEE 1675


>gb|KJB65398.1| hypothetical protein B456_010G093100 [Gossypium raimondii]
          Length = 1657

 Score =  789 bits (2038), Expect = 0.0
 Identities = 423/707 (59%), Positives = 511/707 (72%), Gaps = 16/707 (2%)
 Frame = -1

Query: 2258 LKQSHNPHNLL---------AKAKTQGGMATEKPLAFVHMPAELLVPINVSISVLKSFYL 2106
            LKQSHNPHNLL         AKA +Q G+  EKP   VHMP ELL+ ++V +SVLKS YL
Sbjct: 978  LKQSHNPHNLLVNFNDEGVSAKA-SQAGVVNEKPRFHVHMPPELLLVLDVPVSVLKSLYL 1036

Query: 2105 LPSLMHRLESLMLAIQLREEIS-CDRNIYHIPSSLILEALTSLRCCEAFSLERLELLGDS 1929
            LPSLMHRLESLMLA QLREEI+ C  NI  IPSS+ILEALT+LRCCE+FS+ERLELLGDS
Sbjct: 1037 LPSLMHRLESLMLANQLREEINFCSSNI-DIPSSMILEALTTLRCCESFSMERLELLGDS 1095

Query: 1928 VLKYVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRWLA 1749
            VLKY VSC+LFL+YP KHEGQLSARRS AVCNSTLHKLGTD K+QGYIRD AFDPRRW+A
Sbjct: 1096 VLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNSTLHKLGTDHKIQGYIRDSAFDPRRWVA 1155

Query: 1748 PGQSSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEALIG 1569
            PGQ  LRPVPC+CGVD+ EVPL+KKF TEDPK  VGK+CDRGHRW+CSK+ISDC EALIG
Sbjct: 1156 PGQRVLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKSCDRGHRWLCSKTISDCVEALIG 1215

Query: 1568 AYYVGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYTFT 1389
            AYY+ GGL++A  +MKWLGID+E +P ++ + I  ASL  Y P  ++   +ESK+ Y F+
Sbjct: 1216 AYYLSGGLVAALHVMKWLGIDAELDPLVVAEVINQASLRTYVPNYEI-HMIESKVGYNFS 1274

Query: 1388 MKGLLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLRSA 1209
            +K  L EA+TH S  E    YCYQRLEFLGDSVLDLLIT++L+  HTDIDPGELTDLRSA
Sbjct: 1275 VKFFLQEALTHESLHE---SYCYQRLEFLGDSVLDLLITQYLYNHHTDIDPGELTDLRSA 1331

Query: 1208 SVNNESFAKACIRHDLQQHLQHCSGLLLEQITEYSKFISDHDRSP--FQNVKCPKVLGDL 1035
            SVNNE+FA+  +RHDL +HLQHCS LL  QI+EY +  ++ D +     ++K PK LGDL
Sbjct: 1332 SVNNENFAQVAVRHDLHKHLQHCSTLLSNQISEYVRSFTESDNTTRLDPSIKGPKALGDL 1391

Query: 1034 VESIAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVCL 855
            VESI GAILIDT LN+D VWRI +PLLSPIVTP+KLELPP+RELNELC   GYFIKE C 
Sbjct: 1392 VESIVGAILIDTNLNLDKVWRIVEPLLSPIVTPDKLELPPFRELNELCDSLGYFIKEKCK 1451

Query: 854  QKEDTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVSRKDFE 675
             K + VH EL LQL+  LL GEG DR +K AKG+AA  LLKDLE+RGI      SRK  +
Sbjct: 1452 NKGEVVHAELLLQLDHDLLVGEGFDRSRKVAKGKAASCLLKDLENRGI------SRKKRK 1505

Query: 674  MEVDSSIQDMNVDVNRKSIRYNXXXXXXXXXXTAGSPVLETSNTVPAV--AQNSSNLTP- 504
             +   S Q M  D    +I                 P  + S  +  +  ++ + + TP 
Sbjct: 1506 HDCVDSSQTMEDDSLEPTI-----------------PKRQRSAEIQLLDESKKACSATPA 1548

Query: 503  -PATITINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGKTCFNIFVS 327
             P  +T+  KKGGPR++L+ELCK++ WPMP+  +TE +S  P+++      K  F  FVS
Sbjct: 1549 TPVIVTVKTKKGGPRTTLFELCKKLLWPMPSIKATEHKSSAPMEIGEGPERKKGFISFVS 1608

Query: 326  KIKLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTISD 186
            KI L V  +  IE TGD + DKKSS DSAAL MLYEL + G+  I +
Sbjct: 1609 KIILNVPGYDIIECTGDAKADKKSSSDSAALFMLYELEQRGKLIIEE 1655


>gb|KJB65396.1| hypothetical protein B456_010G093100 [Gossypium raimondii]
          Length = 1675

 Score =  789 bits (2038), Expect = 0.0
 Identities = 423/707 (59%), Positives = 511/707 (72%), Gaps = 16/707 (2%)
 Frame = -1

Query: 2258 LKQSHNPHNLL---------AKAKTQGGMATEKPLAFVHMPAELLVPINVSISVLKSFYL 2106
            LKQSHNPHNLL         AKA +Q G+  EKP   VHMP ELL+ ++V +SVLKS YL
Sbjct: 996  LKQSHNPHNLLVNFNDEGVSAKA-SQAGVVNEKPRFHVHMPPELLLVLDVPVSVLKSLYL 1054

Query: 2105 LPSLMHRLESLMLAIQLREEIS-CDRNIYHIPSSLILEALTSLRCCEAFSLERLELLGDS 1929
            LPSLMHRLESLMLA QLREEI+ C  NI  IPSS+ILEALT+LRCCE+FS+ERLELLGDS
Sbjct: 1055 LPSLMHRLESLMLANQLREEINFCSSNI-DIPSSMILEALTTLRCCESFSMERLELLGDS 1113

Query: 1928 VLKYVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRWLA 1749
            VLKY VSC+LFL+YP KHEGQLSARRS AVCNSTLHKLGTD K+QGYIRD AFDPRRW+A
Sbjct: 1114 VLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNSTLHKLGTDHKIQGYIRDSAFDPRRWVA 1173

Query: 1748 PGQSSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEALIG 1569
            PGQ  LRPVPC+CGVD+ EVPL+KKF TEDPK  VGK+CDRGHRW+CSK+ISDC EALIG
Sbjct: 1174 PGQRVLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKSCDRGHRWLCSKTISDCVEALIG 1233

Query: 1568 AYYVGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYTFT 1389
            AYY+ GGL++A  +MKWLGID+E +P ++ + I  ASL  Y P  ++   +ESK+ Y F+
Sbjct: 1234 AYYLSGGLVAALHVMKWLGIDAELDPLVVAEVINQASLRTYVPNYEI-HMIESKVGYNFS 1292

Query: 1388 MKGLLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLRSA 1209
            +K  L EA+TH S  E    YCYQRLEFLGDSVLDLLIT++L+  HTDIDPGELTDLRSA
Sbjct: 1293 VKFFLQEALTHESLHE---SYCYQRLEFLGDSVLDLLITQYLYNHHTDIDPGELTDLRSA 1349

Query: 1208 SVNNESFAKACIRHDLQQHLQHCSGLLLEQITEYSKFISDHDRSP--FQNVKCPKVLGDL 1035
            SVNNE+FA+  +RHDL +HLQHCS LL  QI+EY +  ++ D +     ++K PK LGDL
Sbjct: 1350 SVNNENFAQVAVRHDLHKHLQHCSTLLSNQISEYVRSFTESDNTTRLDPSIKGPKALGDL 1409

Query: 1034 VESIAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVCL 855
            VESI GAILIDT LN+D VWRI +PLLSPIVTP+KLELPP+RELNELC   GYFIKE C 
Sbjct: 1410 VESIVGAILIDTNLNLDKVWRIVEPLLSPIVTPDKLELPPFRELNELCDSLGYFIKEKCK 1469

Query: 854  QKEDTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVSRKDFE 675
             K + VH EL LQL+  LL GEG DR +K AKG+AA  LLKDLE+RGI      SRK  +
Sbjct: 1470 NKGEVVHAELLLQLDHDLLVGEGFDRSRKVAKGKAASCLLKDLENRGI------SRKKRK 1523

Query: 674  MEVDSSIQDMNVDVNRKSIRYNXXXXXXXXXXTAGSPVLETSNTVPAV--AQNSSNLTP- 504
             +   S Q M  D    +I                 P  + S  +  +  ++ + + TP 
Sbjct: 1524 HDCVDSSQTMEDDSLEPTI-----------------PKRQRSAEIQLLDESKKACSATPA 1566

Query: 503  -PATITINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGKTCFNIFVS 327
             P  +T+  KKGGPR++L+ELCK++ WPMP+  +TE +S  P+++      K  F  FVS
Sbjct: 1567 TPVIVTVKTKKGGPRTTLFELCKKLLWPMPSIKATEHKSSAPMEIGEGPERKKGFISFVS 1626

Query: 326  KIKLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTISD 186
            KI L V  +  IE TGD + DKKSS DSAAL MLYEL + G+  I +
Sbjct: 1627 KIILNVPGYDIIECTGDAKADKKSSSDSAALFMLYELEQRGKLIIEE 1673


>gb|KJB65395.1| hypothetical protein B456_010G093100 [Gossypium raimondii]
          Length = 1659

 Score =  789 bits (2038), Expect = 0.0
 Identities = 423/707 (59%), Positives = 511/707 (72%), Gaps = 16/707 (2%)
 Frame = -1

Query: 2258 LKQSHNPHNLL---------AKAKTQGGMATEKPLAFVHMPAELLVPINVSISVLKSFYL 2106
            LKQSHNPHNLL         AKA +Q G+  EKP   VHMP ELL+ ++V +SVLKS YL
Sbjct: 980  LKQSHNPHNLLVNFNDEGVSAKA-SQAGVVNEKPRFHVHMPPELLLVLDVPVSVLKSLYL 1038

Query: 2105 LPSLMHRLESLMLAIQLREEIS-CDRNIYHIPSSLILEALTSLRCCEAFSLERLELLGDS 1929
            LPSLMHRLESLMLA QLREEI+ C  NI  IPSS+ILEALT+LRCCE+FS+ERLELLGDS
Sbjct: 1039 LPSLMHRLESLMLANQLREEINFCSSNI-DIPSSMILEALTTLRCCESFSMERLELLGDS 1097

Query: 1928 VLKYVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRWLA 1749
            VLKY VSC+LFL+YP KHEGQLSARRS AVCNSTLHKLGTD K+QGYIRD AFDPRRW+A
Sbjct: 1098 VLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNSTLHKLGTDHKIQGYIRDSAFDPRRWVA 1157

Query: 1748 PGQSSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEALIG 1569
            PGQ  LRPVPC+CGVD+ EVPL+KKF TEDPK  VGK+CDRGHRW+CSK+ISDC EALIG
Sbjct: 1158 PGQRVLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKSCDRGHRWLCSKTISDCVEALIG 1217

Query: 1568 AYYVGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYTFT 1389
            AYY+ GGL++A  +MKWLGID+E +P ++ + I  ASL  Y P  ++   +ESK+ Y F+
Sbjct: 1218 AYYLSGGLVAALHVMKWLGIDAELDPLVVAEVINQASLRTYVPNYEI-HMIESKVGYNFS 1276

Query: 1388 MKGLLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLRSA 1209
            +K  L EA+TH S  E    YCYQRLEFLGDSVLDLLIT++L+  HTDIDPGELTDLRSA
Sbjct: 1277 VKFFLQEALTHESLHE---SYCYQRLEFLGDSVLDLLITQYLYNHHTDIDPGELTDLRSA 1333

Query: 1208 SVNNESFAKACIRHDLQQHLQHCSGLLLEQITEYSKFISDHDRSP--FQNVKCPKVLGDL 1035
            SVNNE+FA+  +RHDL +HLQHCS LL  QI+EY +  ++ D +     ++K PK LGDL
Sbjct: 1334 SVNNENFAQVAVRHDLHKHLQHCSTLLSNQISEYVRSFTESDNTTRLDPSIKGPKALGDL 1393

Query: 1034 VESIAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVCL 855
            VESI GAILIDT LN+D VWRI +PLLSPIVTP+KLELPP+RELNELC   GYFIKE C 
Sbjct: 1394 VESIVGAILIDTNLNLDKVWRIVEPLLSPIVTPDKLELPPFRELNELCDSLGYFIKEKCK 1453

Query: 854  QKEDTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVSRKDFE 675
             K + VH EL LQL+  LL GEG DR +K AKG+AA  LLKDLE+RGI      SRK  +
Sbjct: 1454 NKGEVVHAELLLQLDHDLLVGEGFDRSRKVAKGKAASCLLKDLENRGI------SRKKRK 1507

Query: 674  MEVDSSIQDMNVDVNRKSIRYNXXXXXXXXXXTAGSPVLETSNTVPAV--AQNSSNLTP- 504
             +   S Q M  D    +I                 P  + S  +  +  ++ + + TP 
Sbjct: 1508 HDCVDSSQTMEDDSLEPTI-----------------PKRQRSAEIQLLDESKKACSATPA 1550

Query: 503  -PATITINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGKTCFNIFVS 327
             P  +T+  KKGGPR++L+ELCK++ WPMP+  +TE +S  P+++      K  F  FVS
Sbjct: 1551 TPVIVTVKTKKGGPRTTLFELCKKLLWPMPSIKATEHKSSAPMEIGEGPERKKGFISFVS 1610

Query: 326  KIKLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTISD 186
            KI L V  +  IE TGD + DKKSS DSAAL MLYEL + G+  I +
Sbjct: 1611 KIILNVPGYDIIECTGDAKADKKSSSDSAALFMLYELEQRGKLIIEE 1657


>gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
          Length = 1655

 Score =  786 bits (2031), Expect = 0.0
 Identities = 423/705 (60%), Positives = 510/705 (72%), Gaps = 14/705 (1%)
 Frame = -1

Query: 2258 LKQSHNPHNLL---------AKAKTQGGMATEKPLAFVHMPAELLVPINVSISVLKSFYL 2106
            LKQSHNPHNLL         AKA +Q G+  EKP   VHMP ELL+ ++V +SVLKS YL
Sbjct: 976  LKQSHNPHNLLVNFNDEGVSAKA-SQAGVVNEKPRFHVHMPPELLLVLDVPVSVLKSLYL 1034

Query: 2105 LPSLMHRLESLMLAIQLREEIS-CDRNIYHIPSSLILEALTSLRCCEAFSLERLELLGDS 1929
            LPSLMHRLESLMLA QLREEI+ C  NI  IPSS+ILEALT+LRCCE+FS+ERLELLGDS
Sbjct: 1035 LPSLMHRLESLMLANQLREEINFCSSNI-DIPSSMILEALTTLRCCESFSMERLELLGDS 1093

Query: 1928 VLKYVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRWLA 1749
            VLKY VSC+LFL+YP KHEGQLSARRS AVCNSTLHKLGTD K+QGYIRD AFDPRRW+A
Sbjct: 1094 VLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNSTLHKLGTDHKIQGYIRDSAFDPRRWVA 1153

Query: 1748 PGQSSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEALIG 1569
            PGQ  LRPVPC+CGVD+ EVPL+KKF TEDPK  VGK+CDRGHRW+CSK+ISDC EALIG
Sbjct: 1154 PGQRVLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKSCDRGHRWLCSKTISDCVEALIG 1213

Query: 1568 AYYVGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYTFT 1389
            AYY+ GGL++A  +MKWLGID+E +P ++ + I  ASL  Y P  ++   +ESK+ Y F+
Sbjct: 1214 AYYLSGGLVAALHVMKWLGIDAELDPLVVAEVINQASLRTYVPNYEI-HMIESKVGYNFS 1272

Query: 1388 MKGLLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLRSA 1209
            +K  L EA+TH S  E    YCYQRLEFLGDSVLDLLIT++L+  HT+IDPGELTDLRSA
Sbjct: 1273 VKFFLQEALTHESLHE---SYCYQRLEFLGDSVLDLLITQYLYNHHTNIDPGELTDLRSA 1329

Query: 1208 SVNNESFAKACIRHDLQQHLQHCSGLLLEQITEYSKFISDHDRSP--FQNVKCPKVLGDL 1035
            SVNNE+FA+  +RHDL +HLQHCS LL  QI+EY +  ++ D +     ++K PK LGDL
Sbjct: 1330 SVNNENFAQVAVRHDLHKHLQHCSTLLSNQISEYVQSFTESDNTTRLDPSIKGPKALGDL 1389

Query: 1034 VESIAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVCL 855
            VESI GAILIDT LN+D VWRI +PLLSPIVTP+KLELPP+RELNELC   GYFIKE C 
Sbjct: 1390 VESIVGAILIDTNLNLDKVWRIVEPLLSPIVTPDKLELPPFRELNELCDSLGYFIKEKCK 1449

Query: 854  QKEDTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVSRKDFE 675
             K + VH EL LQL+  LL GEG DR +K AKG+AA  LLKDLE+RGI      SRK  +
Sbjct: 1450 NKGEVVHAELLLQLDHDLLVGEGFDRSRKVAKGKAASCLLKDLENRGI------SRKKRK 1503

Query: 674  MEVDSSIQDMNVDVNRKSIRYNXXXXXXXXXXTAGSPVLETSNTVPAVAQNSSNLTP--P 501
             +   S Q M  D    +I              A   +L+ S       + + + TP  P
Sbjct: 1504 HDCVDSSQTMEDDSLEPTI--------PKRQRRAEIQLLDES-------KKACSATPATP 1548

Query: 500  ATITINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGKTCFNIFVSKI 321
              +T+  KKGGPR++L+ELCK++ WPMP+  +TE +S  P+++      K  F  FVSKI
Sbjct: 1549 VIVTVKTKKGGPRTTLFELCKKLLWPMPSIKATEHKSSAPMEIGEGPERKKGFISFVSKI 1608

Query: 320  KLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTISD 186
             L V  +  IE TGD + DKKSS DSAAL MLYEL + G+  I +
Sbjct: 1609 ILNVPGYDIIECTGDAKADKKSSSDSAALFMLYELEQRGKLIIEE 1653


>ref|XP_008357238.1| PREDICTED: endoribonuclease Dicer homolog 3a-like isoform X2 [Malus
            domestica]
          Length = 1654

 Score =  785 bits (2026), Expect = 0.0
 Identities = 421/704 (59%), Positives = 497/704 (70%), Gaps = 14/704 (1%)
 Frame = -1

Query: 2258 LKQSHNPHNLLAKAKTQGG--------MATEKPLAFVHMPAELLVPINVSISVLKSFYLL 2103
            LKQSHNPHNLL     +GG        +   K   + HMP ELLV I V   VLKS YLL
Sbjct: 953  LKQSHNPHNLLVNFNGEGGNGKTLQSGVVIGKQRMYAHMPPELLVTIGVPRDVLKSCYLL 1012

Query: 2102 PSLMHRLESLMLAIQLREEISCDRNIYHIPSSLILEALTSLRCCEAFSLERLELLGDSVL 1923
            PSL+HRLESLMLA QLRE+I+   + + I SSLILEALT+LRC + FS+ERLELLGDS+L
Sbjct: 1013 PSLIHRLESLMLASQLREDINYHCSSFGISSSLILEALTTLRCNDDFSMERLELLGDSIL 1072

Query: 1922 KYVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRWLAPG 1743
            KY VSC+LFLKYPKKHEGQL+  R   +CNS LH+LG + KLQGYIRDGAFDP RW+APG
Sbjct: 1073 KYTVSCHLFLKYPKKHEGQLTNYRMLTICNSNLHRLGMNRKLQGYIRDGAFDPCRWVAPG 1132

Query: 1742 QSSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEALIGAY 1563
            Q SLRPVPC CGV+T EVPL+ KF TEDPK VVGK+CD+GHRW+CSK+ISDC EALIGAY
Sbjct: 1133 QISLRPVPCNCGVETLEVPLDSKFQTEDPKVVVGKSCDKGHRWMCSKTISDCVEALIGAY 1192

Query: 1562 YVGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYTFTMK 1383
            YV GGL +A  +MKWL ID   EP+L+  AI  ASL  Y P+ + +  LESK+ Y F+ K
Sbjct: 1193 YVAGGLPAALHVMKWLDIDVXLEPSLVADAITTASLHLYTPKANEIAVLESKLHYEFSTK 1252

Query: 1382 GLLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLRSASV 1203
            GLLLEA+THAS QE G  YCY+RLEFLGDSVLDLLITRHL+ +HTDIDPGELTDLRSASV
Sbjct: 1253 GLLLEAMTHASDQESGGGYCYERLEFLGDSVLDLLITRHLYHSHTDIDPGELTDLRSASV 1312

Query: 1202 NNESFAKACIRHDLQQHLQHCSGLLLEQITEYSKFISDHDR-SPFQNVKCPKVLGDLVES 1026
            NNESFA+  +RHDLQQHLQH S LLL QITEY K +S+ D  +  Q  K PK LGD+VES
Sbjct: 1313 NNESFAQVAVRHDLQQHLQHASMLLLSQITEYVKSLSEPDNGTTLQGTKGPKALGDMVES 1372

Query: 1025 IAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVCLQKE 846
            IAGAILIDT+LN+D VWRIF+PLLSPIVTP+KLELPP REL ELC   GY+ KE C  K 
Sbjct: 1373 IAGAILIDTKLNLDEVWRIFEPLLSPIVTPDKLELPPLRELIELCDLFGYYKKEKCTNKG 1432

Query: 845  DTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVSRKDFEMEV 666
            +TV  EL +QL+DVLL G GCDR KK AKG+AA  LLK LE+RGIS S+   + D     
Sbjct: 1433 ETVXAELTVQLKDVLLTGXGCDRTKKGAKGEAARRLLKKLEERGISFSKK-RKLDANQVG 1491

Query: 665  DSSIQDMNVDVN-----RKSIRYNXXXXXXXXXXTAGSPVLETSNTVPAVAQNSSNLTPP 501
            DSS  D+N  V+     + S                 +P    S +V A   +S N   P
Sbjct: 1492 DSSSLDINHKVSDQXTVKDSSALMVYKRRKTTEMPLAAPPAGVSPSVIARKTSSPNNAAP 1551

Query: 500  ATITINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGKTCFNIFVSKI 321
                IN KKGGPRS+L+ LC + QWP P F  TE +SRTP      S     FN FV+++
Sbjct: 1552 VIKAINMKKGGPRSALFALCMKQQWPKPGFKITETQSRTPFTFGESS--TKYFNSFVAQV 1609

Query: 320  KLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTIS 189
             L++ + G IE TGD R DK SS+DSAA+ +  EL + GR  I+
Sbjct: 1610 XLHIPNSGVIECTGDARPDKGSSEDSAAVVLFQELQRQGRVVIA 1653


>ref|XP_008357237.1| PREDICTED: endoribonuclease Dicer homolog 3a-like isoform X1 [Malus
            domestica]
          Length = 1655

 Score =  785 bits (2026), Expect = 0.0
 Identities = 421/704 (59%), Positives = 497/704 (70%), Gaps = 14/704 (1%)
 Frame = -1

Query: 2258 LKQSHNPHNLLAKAKTQGG--------MATEKPLAFVHMPAELLVPINVSISVLKSFYLL 2103
            LKQSHNPHNLL     +GG        +   K   + HMP ELLV I V   VLKS YLL
Sbjct: 954  LKQSHNPHNLLVNFNGEGGNGKTLQSGVVIGKQRMYAHMPPELLVTIGVPRDVLKSCYLL 1013

Query: 2102 PSLMHRLESLMLAIQLREEISCDRNIYHIPSSLILEALTSLRCCEAFSLERLELLGDSVL 1923
            PSL+HRLESLMLA QLRE+I+   + + I SSLILEALT+LRC + FS+ERLELLGDS+L
Sbjct: 1014 PSLIHRLESLMLASQLREDINYHCSSFGISSSLILEALTTLRCNDDFSMERLELLGDSIL 1073

Query: 1922 KYVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRWLAPG 1743
            KY VSC+LFLKYPKKHEGQL+  R   +CNS LH+LG + KLQGYIRDGAFDP RW+APG
Sbjct: 1074 KYTVSCHLFLKYPKKHEGQLTNYRMLTICNSNLHRLGMNRKLQGYIRDGAFDPCRWVAPG 1133

Query: 1742 QSSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEALIGAY 1563
            Q SLRPVPC CGV+T EVPL+ KF TEDPK VVGK+CD+GHRW+CSK+ISDC EALIGAY
Sbjct: 1134 QISLRPVPCNCGVETLEVPLDSKFQTEDPKVVVGKSCDKGHRWMCSKTISDCVEALIGAY 1193

Query: 1562 YVGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYTFTMK 1383
            YV GGL +A  +MKWL ID   EP+L+  AI  ASL  Y P+ + +  LESK+ Y F+ K
Sbjct: 1194 YVAGGLPAALHVMKWLDIDVXLEPSLVADAITTASLHLYTPKANEIAVLESKLHYEFSTK 1253

Query: 1382 GLLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLRSASV 1203
            GLLLEA+THAS QE G  YCY+RLEFLGDSVLDLLITRHL+ +HTDIDPGELTDLRSASV
Sbjct: 1254 GLLLEAMTHASDQESGGGYCYERLEFLGDSVLDLLITRHLYHSHTDIDPGELTDLRSASV 1313

Query: 1202 NNESFAKACIRHDLQQHLQHCSGLLLEQITEYSKFISDHDR-SPFQNVKCPKVLGDLVES 1026
            NNESFA+  +RHDLQQHLQH S LLL QITEY K +S+ D  +  Q  K PK LGD+VES
Sbjct: 1314 NNESFAQVAVRHDLQQHLQHASMLLLSQITEYVKSLSEPDNGTTLQGTKGPKALGDMVES 1373

Query: 1025 IAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVCLQKE 846
            IAGAILIDT+LN+D VWRIF+PLLSPIVTP+KLELPP REL ELC   GY+ KE C  K 
Sbjct: 1374 IAGAILIDTKLNLDEVWRIFEPLLSPIVTPDKLELPPLRELIELCDLFGYYKKEKCTNKG 1433

Query: 845  DTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDRGISHSRHVSRKDFEMEV 666
            +TV  EL +QL+DVLL G GCDR KK AKG+AA  LLK LE+RGIS S+   + D     
Sbjct: 1434 ETVXAELTVQLKDVLLTGXGCDRTKKGAKGEAARRLLKKLEERGISFSKK-RKLDANQVG 1492

Query: 665  DSSIQDMNVDVN-----RKSIRYNXXXXXXXXXXTAGSPVLETSNTVPAVAQNSSNLTPP 501
            DSS  D+N  V+     + S                 +P    S +V A   +S N   P
Sbjct: 1493 DSSSLDINHKVSDQXTVKDSSALMVYKRRKTTEMPLAAPPAGVSPSVIARKTSSPNNAAP 1552

Query: 500  ATITINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGKTCFNIFVSKI 321
                IN KKGGPRS+L+ LC + QWP P F  TE +SRTP      S     FN FV+++
Sbjct: 1553 VIKAINMKKGGPRSALFALCMKQQWPKPGFKITETQSRTPFTFGESS--TKYFNSFVAQV 1610

Query: 320  KLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTIS 189
             L++ + G IE TGD R DK SS+DSAA+ +  EL + GR  I+
Sbjct: 1611 XLHIPNSGVIECTGDARPDKGSSEDSAAVVLFQELQRQGRVVIA 1654


>ref|XP_012450064.1| PREDICTED: endoribonuclease Dicer homolog 3 isoform X7 [Gossypium
            raimondii]
          Length = 1371

 Score =  783 bits (2023), Expect = 0.0
 Identities = 422/714 (59%), Positives = 511/714 (71%), Gaps = 23/714 (3%)
 Frame = -1

Query: 2258 LKQSHNPHNLL---------AKAKTQGGMATEKPLAFVHMPAELLVPINVSISVLKSFYL 2106
            LKQSHNPHNLL         AKA +Q G+  EKP   VHMP ELL+ ++V +SVLKS YL
Sbjct: 679  LKQSHNPHNLLVNFNDEGVSAKA-SQAGVVNEKPRFHVHMPPELLLVLDVPVSVLKSLYL 737

Query: 2105 LPSLMHRLESLMLAIQLREEIS-CDRNIYHIPSSLILEALTSLRCCEAFSLERLELLGDS 1929
            LPSLMHRLESLMLA QLREEI+ C  NI  IPSS+ILEALT+LRCCE+FS+ERLELLGDS
Sbjct: 738  LPSLMHRLESLMLANQLREEINFCSSNI-DIPSSMILEALTTLRCCESFSMERLELLGDS 796

Query: 1928 VLKYVVSCNLFLKYPKKHEGQLSARRSHAVCNSTLHKLGTDCKLQGYIRDGAFDPRRWLA 1749
            VLKY VSC+LFL+YP KHEGQLSARRS AVCNSTLHKLGTD K+QGYIRD AFDPRRW+A
Sbjct: 797  VLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNSTLHKLGTDHKIQGYIRDSAFDPRRWVA 856

Query: 1748 PGQSSLRPVPCECGVDTSEVPLEKKFTTEDPKTVVGKACDRGHRWICSKSISDCAEALIG 1569
            PGQ  LRPVPC+CGVD+ EVPL+KKF TEDPK  VGK+CDRGHRW+CSK+ISDC EALIG
Sbjct: 857  PGQRVLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKSCDRGHRWLCSKTISDCVEALIG 916

Query: 1568 AYYVGGGLISACMMMKWLGIDSEFEPALIDKAIFNASLWCYAPEVDVLKRLESKIDYTFT 1389
            AYY+ GGL++A  +MKWLGID+E +P ++ + I  ASL  Y P  ++   +ESK+ Y F+
Sbjct: 917  AYYLSGGLVAALHVMKWLGIDAELDPLVVAEVINQASLRTYVPNYEI-HMIESKVGYNFS 975

Query: 1388 MKGLLLEAITHASQQELGLDYCYQRLEFLGDSVLDLLITRHLFQTHTDIDPGELTDLRSA 1209
            +K  L EA+TH S  E    YCYQRLEFLGDSVLDLLIT++L+  HTDIDPGELTDLRSA
Sbjct: 976  VKFFLQEALTHESLHE---SYCYQRLEFLGDSVLDLLITQYLYNHHTDIDPGELTDLRSA 1032

Query: 1208 SVNNESFAKACIRHDLQQHLQHCSGLLLEQITEYSKFISDHDRSP--FQNVKCPKVLGDL 1035
            SVNNE+FA+  +RHDL +HLQHCS LL  QI+EY +  ++ D +     ++K PK LGDL
Sbjct: 1033 SVNNENFAQVAVRHDLHKHLQHCSTLLSNQISEYVRSFTESDNTTRLDPSIKGPKALGDL 1092

Query: 1034 VESIAGAILIDTRLNIDLVWRIFKPLLSPIVTPEKLELPPYRELNELCSHRGYFIKEVCL 855
            VESI GAILIDT LN+D VWRI +PLLSPIVTP+KLELPP+RELNELC   GYFIKE C 
Sbjct: 1093 VESIVGAILIDTNLNLDKVWRIVEPLLSPIVTPDKLELPPFRELNELCDSLGYFIKEKCK 1152

Query: 854  QKEDTVHVELRLQLEDVLLKGEGCDRRKKTAKGQAALYLLKDLEDR-------GISHSRH 696
             K + VH EL LQL+  LL GEG DR +K AKG+AA  LLKDLE R           +R 
Sbjct: 1153 NKGEVVHAELLLQLDHDLLVGEGFDRSRKVAKGKAASCLLKDLEVRIHKSLSGHEKGNRG 1212

Query: 695  VSRKDFEMEVDSSIQDMNVDVNRKSIRYNXXXXXXXXXXTAGSPVLETSNTVPAV--AQN 522
            +SRK  + +   S Q M  D    +I                 P  + S  +  +  ++ 
Sbjct: 1213 ISRKKRKHDCVDSSQTMEDDSLEPTI-----------------PKRQRSAEIQLLDESKK 1255

Query: 521  SSNLTP--PATITINKKKGGPRSSLYELCKRMQWPMPTFDSTEQRSRTPVQLNNDSGGKT 348
            + + TP  P  +T+  KKGGPR++L+ELCK++ WPMP+  +TE +S  P+++      K 
Sbjct: 1256 ACSATPATPVIVTVKTKKGGPRTTLFELCKKLLWPMPSIKATEHKSSAPMEIGEGPERKK 1315

Query: 347  CFNIFVSKIKLYVTDFGPIEVTGDERTDKKSSQDSAALTMLYELAKLGRCTISD 186
             F  FVSKI L V  +  IE TGD + DKKSS DSAAL MLYEL + G+  I +
Sbjct: 1316 GFISFVSKIILNVPGYDIIECTGDAKADKKSSSDSAALFMLYELEQRGKLIIEE 1369