BLASTX nr result
ID: Aconitum23_contig00025745
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00025745
(620 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012481361.1| PREDICTED: uncharacterized protein LOC105796... 47 3e-09
gb|KJB27695.1| hypothetical protein B456_005G005100 [Gossypium r... 47 3e-09
gb|KJB27693.1| hypothetical protein B456_005G005100 [Gossypium r... 47 4e-09
gb|KHG19864.1| Poly (A) RNA polymerase cid14 [Gossypium arboreum] 46 2e-08
gb|KHG12716.1| Poly (A) RNA polymerase cid1 [Gossypium arboreum] 46 2e-08
gb|KHG12564.1| Ribosome-recycling factor [Gossypium arboreum] 46 2e-08
ref|XP_012481362.1| PREDICTED: uncharacterized protein LOC105796... 43 4e-06
ref|XP_012481363.1| PREDICTED: uncharacterized protein LOC105796... 43 4e-06
gb|KJB27692.1| hypothetical protein B456_005G005000 [Gossypium r... 43 4e-06
>ref|XP_012481361.1| PREDICTED: uncharacterized protein LOC105796290 [Gossypium
raimondii] gi|763760440|gb|KJB27694.1| hypothetical
protein B456_005G005100 [Gossypium raimondii]
Length = 885
Score = 47.0 bits (110), Expect(2) = 3e-09
Identities = 27/54 (50%), Positives = 31/54 (57%)
Frame = -1
Query: 281 GYLLNCT*SYRCGSPEAPSSLSDLTGDYVNHINSLLFAQWFHDCGFSAQFLPIS 120
GY N S S E SSLSDL GDY +I+SL + QW +D FSA PIS
Sbjct: 607 GYSSNPASSSAAPSQELLSSLSDLCGDYDANIHSLSYGQWCYDYAFSASVPPIS 660
Score = 41.2 bits (95), Expect(2) = 3e-09
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = -2
Query: 619 GDAEGNTISGIPGPMFTSGTSESVPPSY-EITSSPGFAHHAPHLYLSPPVREVGKIGTRN 443
GDA+ S I G + ++ +S PP+ ++ S G HAPHLY + G+I N
Sbjct: 476 GDAKDLATSRIQGLVISNDAHKSCPPNAADVFPSSGTVRHAPHLYFCNSSLDNGEIRNGN 535
Query: 442 PDELEETSSAIHGNKLYSTELDSMNIKDSEASLLGINDNIDLSEDGLVTVGNVE 281
+ + +S + S + I + + +G N++ D SE+ LV V+
Sbjct: 536 VERKQPENSGL------SERNATSGILCASSEEMGANEHGDQSENQLVASRGVQ 583
>gb|KJB27695.1| hypothetical protein B456_005G005100 [Gossypium raimondii]
Length = 881
Score = 47.0 bits (110), Expect(2) = 3e-09
Identities = 27/54 (50%), Positives = 31/54 (57%)
Frame = -1
Query: 281 GYLLNCT*SYRCGSPEAPSSLSDLTGDYVNHINSLLFAQWFHDCGFSAQFLPIS 120
GY N S S E SSLSDL GDY +I+SL + QW +D FSA PIS
Sbjct: 607 GYSSNPASSSAAPSQELLSSLSDLCGDYDANIHSLSYGQWCYDYAFSASVPPIS 660
Score = 41.2 bits (95), Expect(2) = 3e-09
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = -2
Query: 619 GDAEGNTISGIPGPMFTSGTSESVPPSY-EITSSPGFAHHAPHLYLSPPVREVGKIGTRN 443
GDA+ S I G + ++ +S PP+ ++ S G HAPHLY + G+I N
Sbjct: 476 GDAKDLATSRIQGLVISNDAHKSCPPNAADVFPSSGTVRHAPHLYFCNSSLDNGEIRNGN 535
Query: 442 PDELEETSSAIHGNKLYSTELDSMNIKDSEASLLGINDNIDLSEDGLVTVGNVE 281
+ + +S + S + I + + +G N++ D SE+ LV V+
Sbjct: 536 VERKQPENSGL------SERNATSGILCASSEEMGANEHGDQSENQLVASRGVQ 583
>gb|KJB27693.1| hypothetical protein B456_005G005100 [Gossypium raimondii]
Length = 736
Score = 47.0 bits (110), Expect(2) = 4e-09
Identities = 27/54 (50%), Positives = 31/54 (57%)
Frame = -1
Query: 281 GYLLNCT*SYRCGSPEAPSSLSDLTGDYVNHINSLLFAQWFHDCGFSAQFLPIS 120
GY N S S E SSLSDL GDY +I+SL + QW +D FSA PIS
Sbjct: 607 GYSSNPASSSAAPSQELLSSLSDLCGDYDANIHSLSYGQWCYDYAFSASVPPIS 660
Score = 41.2 bits (95), Expect(2) = 4e-09
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = -2
Query: 619 GDAEGNTISGIPGPMFTSGTSESVPPSY-EITSSPGFAHHAPHLYLSPPVREVGKIGTRN 443
GDA+ S I G + ++ +S PP+ ++ S G HAPHLY + G+I N
Sbjct: 476 GDAKDLATSRIQGLVISNDAHKSCPPNAADVFPSSGTVRHAPHLYFCNSSLDNGEIRNGN 535
Query: 442 PDELEETSSAIHGNKLYSTELDSMNIKDSEASLLGINDNIDLSEDGLVTVGNVE 281
+ + +S + S + I + + +G N++ D SE+ LV V+
Sbjct: 536 VERKQPENSGL------SERNATSGILCASSEEMGANEHGDQSENQLVASRGVQ 583
>gb|KHG19864.1| Poly (A) RNA polymerase cid14 [Gossypium arboreum]
Length = 881
Score = 45.8 bits (107), Expect(2) = 2e-08
Identities = 26/54 (48%), Positives = 30/54 (55%)
Frame = -1
Query: 281 GYLLNCT*SYRCGSPEAPSSLSDLTGDYVNHINSLLFAQWFHDCGFSAQFLPIS 120
GY N S S E SSLSDL GDY +I+ L + QW +D FSA PIS
Sbjct: 607 GYSSNPASSSAAPSQELLSSLSDLCGDYDANIHGLSYGQWCYDYAFSASIPPIS 660
Score = 40.0 bits (92), Expect(2) = 2e-08
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = -2
Query: 619 GDAEGNTISGIPGPMFTSGTSESVPPSYEIT-SSPGFAHHAPHLYLSPPVREVGKIGTRN 443
GDA+ S G + ++ +S PP+ E SS G HAPHLY + G+I N
Sbjct: 476 GDAKDLATSRFQGLVISNDAHKSCPPNAEDGFSSSGTVRHAPHLYFCNLSLDNGEIRNGN 535
Query: 442 PDELEETSSAIHGNKLYSTELDSMNIKDSEASLLGINDNIDLSEDGLVTVGNVE 281
+ + +S + S + I + + G N++ D SE+ LV V+
Sbjct: 536 VERKQPENSGL------SERSATSGILSASSEQTGANEHGDHSENQLVASRGVQ 583
>gb|KHG12716.1| Poly (A) RNA polymerase cid1 [Gossypium arboreum]
Length = 810
Score = 45.8 bits (107), Expect(2) = 2e-08
Identities = 26/54 (48%), Positives = 30/54 (55%)
Frame = -1
Query: 281 GYLLNCT*SYRCGSPEAPSSLSDLTGDYVNHINSLLFAQWFHDCGFSAQFLPIS 120
GY N S S E SSLSDL GDY +I+ L + QW +D FSA PIS
Sbjct: 532 GYSSNPASSSAAPSQELLSSLSDLCGDYDANIHGLSYGQWCYDYAFSASIPPIS 585
Score = 40.0 bits (92), Expect(2) = 2e-08
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = -2
Query: 619 GDAEGNTISGIPGPMFTSGTSESVPPSYEIT-SSPGFAHHAPHLYLSPPVREVGKIGTRN 443
GDA+ S G + ++ +S PP+ E SS G HAPHLY + G+I N
Sbjct: 401 GDAKDLATSRFQGLVISNDAHKSCPPNAEDGFSSSGTVRHAPHLYFCNLSLDNGEIRNGN 460
Query: 442 PDELEETSSAIHGNKLYSTELDSMNIKDSEASLLGINDNIDLSEDGLVTVGNVE 281
+ + +S + S + I + + G N++ D SE+ LV V+
Sbjct: 461 VERKQPENSGL------SERSATSGILSASSEQTGANEHGDHSENQLVASRGVQ 508
>gb|KHG12564.1| Ribosome-recycling factor [Gossypium arboreum]
Length = 708
Score = 45.8 bits (107), Expect(2) = 2e-08
Identities = 26/54 (48%), Positives = 30/54 (55%)
Frame = -1
Query: 281 GYLLNCT*SYRCGSPEAPSSLSDLTGDYVNHINSLLFAQWFHDCGFSAQFLPIS 120
GY N S S E SSLSDL GDY +I+ L + QW +D FSA PIS
Sbjct: 434 GYSSNPASSSAAPSQELLSSLSDLCGDYDANIHGLSYGQWCYDYAFSASIPPIS 487
Score = 40.0 bits (92), Expect(2) = 2e-08
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = -2
Query: 619 GDAEGNTISGIPGPMFTSGTSESVPPSYEIT-SSPGFAHHAPHLYLSPPVREVGKIGTRN 443
GDA+ S G + ++ +S PP+ E SS G HAPHLY + G+I N
Sbjct: 303 GDAKDLATSRFQGLVISNDAHKSCPPNAEDGFSSSGTVRHAPHLYFCNLSLDNGEIRNGN 362
Query: 442 PDELEETSSAIHGNKLYSTELDSMNIKDSEASLLGINDNIDLSEDGLVTVGNVE 281
+ + +S + S + I + + G N++ D SE+ LV V+
Sbjct: 363 VERKQPENSGL------SERSATSGILSASSEQTGANEHGDHSENQLVASRGVQ 410
>ref|XP_012481362.1| PREDICTED: uncharacterized protein LOC105796291 isoform X1
[Gossypium raimondii] gi|763760437|gb|KJB27691.1|
hypothetical protein B456_005G005000 [Gossypium
raimondii]
Length = 884
Score = 42.7 bits (99), Expect(2) = 4e-06
Identities = 25/54 (46%), Positives = 29/54 (53%)
Frame = -1
Query: 281 GYLLNCT*SYRCGSPEAPSSLSDLTGDYVNHINSLLFAQWFHDCGFSAQFLPIS 120
GY N S E SSLSDL GDY +I SL + QW+ D FSA P+S
Sbjct: 606 GYSSNPASCSAAPSRELLSSLSDLCGDYDANIRSLSYGQWWFDYAFSAAVPPMS 659
Score = 35.0 bits (79), Expect(2) = 4e-06
Identities = 27/104 (25%), Positives = 45/104 (43%)
Frame = -2
Query: 619 GDAEGNTISGIPGPMFTSGTSESVPPSYEITSSPGFAHHAPHLYLSPPVREVGKIGTRNP 440
GDA+ S I G + ++ +S PP+ G HAPHLY + G+I N
Sbjct: 476 GDAKDLATSRIQGLVISNDAHKSCPPNAADVFPSGTVRHAPHLYFCNSSLDNGEIRNGNV 535
Query: 439 DELEETSSAIHGNKLYSTELDSMNIKDSEASLLGINDNIDLSED 308
+ + +S + S E + I + +G + + D SE+
Sbjct: 536 ECKQSENSVL------SEENATSGILGESSEKMGADVHGDHSEN 573
>ref|XP_012481363.1| PREDICTED: uncharacterized protein LOC105796291 isoform X2
[Gossypium raimondii]
Length = 749
Score = 42.7 bits (99), Expect(2) = 4e-06
Identities = 25/54 (46%), Positives = 29/54 (53%)
Frame = -1
Query: 281 GYLLNCT*SYRCGSPEAPSSLSDLTGDYVNHINSLLFAQWFHDCGFSAQFLPIS 120
GY N S E SSLSDL GDY +I SL + QW+ D FSA P+S
Sbjct: 471 GYSSNPASCSAAPSRELLSSLSDLCGDYDANIRSLSYGQWWFDYAFSAAVPPMS 524
Score = 35.0 bits (79), Expect(2) = 4e-06
Identities = 27/104 (25%), Positives = 45/104 (43%)
Frame = -2
Query: 619 GDAEGNTISGIPGPMFTSGTSESVPPSYEITSSPGFAHHAPHLYLSPPVREVGKIGTRNP 440
GDA+ S I G + ++ +S PP+ G HAPHLY + G+I N
Sbjct: 341 GDAKDLATSRIQGLVISNDAHKSCPPNAADVFPSGTVRHAPHLYFCNSSLDNGEIRNGNV 400
Query: 439 DELEETSSAIHGNKLYSTELDSMNIKDSEASLLGINDNIDLSED 308
+ + +S + S E + I + +G + + D SE+
Sbjct: 401 ECKQSENSVL------SEENATSGILGESSEKMGADVHGDHSEN 438
>gb|KJB27692.1| hypothetical protein B456_005G005000 [Gossypium raimondii]
Length = 737
Score = 42.7 bits (99), Expect(2) = 4e-06
Identities = 25/54 (46%), Positives = 29/54 (53%)
Frame = -1
Query: 281 GYLLNCT*SYRCGSPEAPSSLSDLTGDYVNHINSLLFAQWFHDCGFSAQFLPIS 120
GY N S E SSLSDL GDY +I SL + QW+ D FSA P+S
Sbjct: 606 GYSSNPASCSAAPSRELLSSLSDLCGDYDANIRSLSYGQWWFDYAFSAAVPPMS 659
Score = 35.0 bits (79), Expect(2) = 4e-06
Identities = 27/104 (25%), Positives = 45/104 (43%)
Frame = -2
Query: 619 GDAEGNTISGIPGPMFTSGTSESVPPSYEITSSPGFAHHAPHLYLSPPVREVGKIGTRNP 440
GDA+ S I G + ++ +S PP+ G HAPHLY + G+I N
Sbjct: 476 GDAKDLATSRIQGLVISNDAHKSCPPNAADVFPSGTVRHAPHLYFCNSSLDNGEIRNGNV 535
Query: 439 DELEETSSAIHGNKLYSTELDSMNIKDSEASLLGINDNIDLSED 308
+ + +S + S E + I + +G + + D SE+
Sbjct: 536 ECKQSENSVL------SEENATSGILGESSEKMGADVHGDHSEN 573