BLASTX nr result

ID: Aconitum23_contig00025729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00025729
         (437 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011458091.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,...    57   5e-06
ref|XP_004290060.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06

>ref|XP_011458091.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           isoform X2 [Fragaria vesca subsp. vesca]
          Length = 871

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 5/52 (9%)
 Frame = -3

Query: 255 VTKVLLNNAKNPSFSWHFFKHLLSSPAS-----SSFHKSIPTITRILISSQM 115
           +TK L NN  NP  +WH FK +LSSP S     SS H S+P I RILISS+M
Sbjct: 6   LTKALHNNTNNPKLAWHLFKRILSSPTSTSTSTSSSHLSLPIIARILISSKM 57


>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 874

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
 Frame = -3

Query: 258 RVTKVLLNNAKNPSFSWHFFKHLLSSPASSSFH-KSIPTITRILISSQM 115
           ++TK LLNNA NP  +WH FK +LS P SS+   +SIP I+RILI S+M
Sbjct: 6   KLTKALLNNAHNPKLAWHLFKRILSLPISSNHRSQSIPIISRILIRSKM 54


>ref|XP_004290060.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           isoform X1 [Fragaria vesca subsp. vesca]
          Length = 871

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 5/52 (9%)
 Frame = -3

Query: 255 VTKVLLNNAKNPSFSWHFFKHLLSSPAS-----SSFHKSIPTITRILISSQM 115
           +TK L NN  NP  +WH FK +LSSP S     SS H S+P I RILISS+M
Sbjct: 6   LTKALHNNTNNPKLAWHLFKRILSSPTSTSTSTSSSHLSLPIIARILISSKM 57


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