BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00023462
         (1178 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010265125.1| PREDICTED: chloroplastic group IIA intron sp...   592   e-166
ref|XP_008240263.1| PREDICTED: chloroplastic group IIA intron sp...   583   e-164
ref|XP_010663603.1| PREDICTED: chloroplastic group IIA intron sp...   582   e-163
ref|XP_010663604.1| PREDICTED: chloroplastic group IIA intron sp...   582   e-163
ref|XP_012093011.1| PREDICTED: chloroplastic group IIA intron sp...   582   e-163
ref|XP_007211308.1| hypothetical protein PRUPE_ppa001468mg [Prun...   581   e-163
emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]   580   e-163
ref|XP_008374754.1| PREDICTED: chloroplastic group IIA intron sp...   579   e-162
ref|XP_009360154.1| PREDICTED: chloroplastic group IIA intron sp...   578   e-162
ref|XP_009347186.1| PREDICTED: chloroplastic group IIA intron sp...   577   e-162
ref|XP_008393315.1| PREDICTED: chloroplastic group IIA intron sp...   576   e-161
ref|XP_011045860.1| PREDICTED: chloroplastic group IIA intron sp...   572   e-160
ref|XP_011045859.1| PREDICTED: chloroplastic group IIA intron sp...   572   e-160
ref|XP_012440292.1| PREDICTED: chloroplastic group IIA intron sp...   570   e-160
ref|XP_012440291.1| PREDICTED: chloroplastic group IIA intron sp...   570   e-160
ref|XP_012440290.1| PREDICTED: chloroplastic group IIA intron sp...   570   e-160
gb|KHG01961.1| Chloroplastic group IIA intron splicing facilitat...   570   e-160
ref|XP_007036533.1| CRS1 / YhbY domain-containing protein [Theob...   569   e-159
ref|XP_002532154.1| conserved hypothetical protein [Ricinus comm...   568   e-159
ref|XP_004300521.1| PREDICTED: chloroplastic group IIA intron sp...   568   e-159

>ref|XP_010265125.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nelumbo nucifera]
          Length = 838

 Score =  592 bits (1527), Expect = e-166
 Identities = 298/394 (75%), Positives = 342/394 (86%), Gaps = 2/394 (0%)
 Frame = -3

Query: 1176 DTFLAPHVSSADNFALRNGNDAISTSDETK--LKDMVPVESLTDEEMEYNSLLDGLGPRF 1003
            +    P VSS+ N   +  ND +S  ++    +++    ES+T+EE EYNSLLDGLGPRF
Sbjct: 334  NALFVPDVSSSANSISKINNDIMSAPEKKDPGVQNPNQAESMTEEEAEYNSLLDGLGPRF 393

Query: 1002 VDWWGTGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALG 823
            VDWWGTG +P+DA+LLP TIP Y TPFRLLP+GMR RLTNAEMTNLR L+KSLP HFALG
Sbjct: 394  VDWWGTGILPVDADLLPQTIPSYKTPFRLLPTGMRPRLTNAEMTNLRKLAKSLPCHFALG 453

Query: 822  RNRNHQGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVI 643
            RNRNHQGLA+AIVKLW+KSLVAKIA+K GIQNTNNK+MAEE+K LTGG LLLR+K++IVI
Sbjct: 454  RNRNHQGLAAAIVKLWDKSLVAKIAVKRGIQNTNNKLMAEELKKLTGGVLLLRNKYYIVI 513

Query: 642  YRGKDFVPTSVAAALAERQELTKEIQDAEERARGRSADTASIEEIEGKPLAGTLAEFHEA 463
            YRGKDF+PTSVA ALAERQELTKEIQD EE+AR  +  +A +EEI G+ LAGTL+E+ EA
Sbjct: 514  YRGKDFLPTSVAFALAERQELTKEIQDVEEKARSGAVVSAHVEEIGGQALAGTLSEYREA 573

Query: 462  KSRWGKEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVPV 283
            ++RWG+E+SAEE EKMKEEA+RAKNA+ V RIEHKL  AQAK+LRAE+LLAKIE SMVPV
Sbjct: 574  QARWGREISAEEHEKMKEEASRAKNAKAVKRIEHKLTVAQAKKLRAEKLLAKIEKSMVPV 633

Query: 282  RPSDDQETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQK 103
             PSDDQETITDEER MFRRVGL+MKAYLPLG+RGVF GVIENMHLHWKHRELVKLISKQK
Sbjct: 634  GPSDDQETITDEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQK 693

Query: 102  TLSFVEDSARLMEYESGGILVAIERVPKGYALIY 1
            TLSFVED+ARL+EYESGGILVAIERVPKGYALIY
Sbjct: 694  TLSFVEDTARLLEYESGGILVAIERVPKGYALIY 727


>ref|XP_008240263.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Prunus mume]
          Length = 820

 Score =  583 bits (1504), Expect = e-164
 Identities = 291/389 (74%), Positives = 340/389 (87%), Gaps = 2/389 (0%)
 Frame = -3

Query: 1161 PHVSSADNFALRNGNDAISTSDETKLKDMVPVE--SLTDEEMEYNSLLDGLGPRFVDWWG 988
            P VSSA+  A R+GNDA S  D T+    +P    ++T+EE E+NSLLD LGPRFV+WWG
Sbjct: 325  PDVSSAETSATRSGNDATSGPDNTEKAVKIPAHLPNMTEEEAEFNSLLDDLGPRFVEWWG 384

Query: 987  TGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALGRNRNH 808
            TG +P+DA+LLP TIPGY TPFRLLP+GMRSRLTNAEMTNLR L+KSLP HFALGRNRNH
Sbjct: 385  TGVLPVDADLLPKTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALGRNRNH 444

Query: 807  QGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVIYRGKD 628
            QGLASAI+KLWEKS VAKIA+K GIQNTNNK+MAEE+K LTGG LLLR+K++IV YRGKD
Sbjct: 445  QGLASAIIKLWEKSSVAKIAVKRGIQNTNNKLMAEELKTLTGGVLLLRNKYYIVFYRGKD 504

Query: 627  FVPTSVAAALAERQELTKEIQDAEERARGRSADTASIEEIEGKPLAGTLAEFHEAKSRWG 448
            F+PTSVAAALAERQELTK++QD EE+ R ++ DTAS    EG+ LAGTLAEF+EA++RWG
Sbjct: 505  FLPTSVAAALAERQELTKQVQDVEEKMRIKAIDTASSGAEEGQALAGTLAEFYEAQARWG 564

Query: 447  KEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVPVRPSDD 268
            +E+SAEE EKM EE ++AKNAR+V RIEHKL  AQAK+LRAE+LL+KIESSM+P  P  D
Sbjct: 565  REISAEEREKMIEEDSKAKNARLVKRIEHKLGVAQAKKLRAEKLLSKIESSMLPAGPDYD 624

Query: 267  QETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQKTLSFV 88
            QET+TDEER MFRRVGL+MKAYLPLG+RGVF GV+ENMHLHWKHRELVKLISKQKTL+FV
Sbjct: 625  QETVTDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFV 684

Query: 87   EDSARLMEYESGGILVAIERVPKGYALIY 1
            ED+ARL+E+ESGGILVAIERVPKG+ALIY
Sbjct: 685  EDTARLLEFESGGILVAIERVPKGFALIY 713


>ref|XP_010663603.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Vitis vinifera]
          Length = 833

 Score =  582 bits (1501), Expect = e-163
 Identities = 296/395 (74%), Positives = 341/395 (86%), Gaps = 3/395 (0%)
 Frame = -3

Query: 1176 DTFLAPHVSSADNFALRNGNDAISTSDETKLKDMVPV--ESLTDEEMEYNSLLDGLGPRF 1003
            D+   P VSS DN A+RN N+   T ++  L    PV  E++T+EE EYNSLLDGLGPRF
Sbjct: 315  DSLFVPDVSSVDNPAMRNDNNGGPTLEKGSLPVRNPVHAENMTEEEAEYNSLLDGLGPRF 374

Query: 1002 VDWWGTGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALG 823
            VDWWGTG +P+D +LLP +IPGY TP R+LP+GMR RLTNAEMTNLR L+KSLP HFALG
Sbjct: 375  VDWWGTGVLPVDGDLLPQSIPGYKTPLRILPTGMRPRLTNAEMTNLRKLAKSLPCHFALG 434

Query: 822  RNRNHQGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVI 643
            RNRNHQGLA+AI+KLWEKS+V KIA+KPGIQNTNNK+MAEEIK LTGG LLLR+K++IVI
Sbjct: 435  RNRNHQGLAAAIIKLWEKSIVVKIAVKPGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVI 494

Query: 642  YRGKDFVPTSVAAALAERQELTKEIQDAEERARGRSADT-ASIEEIEGKPLAGTLAEFHE 466
            YRGKDF+PTSVAAAL+ER+ELTK IQ  EE+ R   A+   S E+  G+PLAGTLAEF+E
Sbjct: 495  YRGKDFLPTSVAAALSEREELTKHIQVVEEKVRTGGAEAIPSGEDGVGQPLAGTLAEFYE 554

Query: 465  AKSRWGKEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVP 286
            A++RWG+E+SAEE EKM EEA+RAK+ARVV RIEHKL  AQAK+LRAERLLAKIE+SM+P
Sbjct: 555  AQARWGREISAEEHEKMIEEASRAKSARVVKRIEHKLALAQAKKLRAERLLAKIEASMIP 614

Query: 285  VRPSDDQETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQ 106
              PSDDQETITDEER MFRR+GL+MKAYL LGVRGVF GVIENMHLHWKHRELVKLISKQ
Sbjct: 615  AGPSDDQETITDEERFMFRRLGLRMKAYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQ 674

Query: 105  KTLSFVEDSARLMEYESGGILVAIERVPKGYALIY 1
            KTL+FVED+ARL+EYESGGILVAIERVPKGYALIY
Sbjct: 675  KTLAFVEDTARLLEYESGGILVAIERVPKGYALIY 709


>ref|XP_010663604.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Vitis vinifera]
            gi|297734212|emb|CBI15459.3| unnamed protein product
            [Vitis vinifera]
          Length = 830

 Score =  582 bits (1501), Expect = e-163
 Identities = 296/395 (74%), Positives = 341/395 (86%), Gaps = 3/395 (0%)
 Frame = -3

Query: 1176 DTFLAPHVSSADNFALRNGNDAISTSDETKLKDMVPV--ESLTDEEMEYNSLLDGLGPRF 1003
            D+   P VSS DN A+RN N+   T ++  L    PV  E++T+EE EYNSLLDGLGPRF
Sbjct: 315  DSLFVPDVSSVDNPAMRNDNNGGPTLEKGSLPVRNPVHAENMTEEEAEYNSLLDGLGPRF 374

Query: 1002 VDWWGTGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALG 823
            VDWWGTG +P+D +LLP +IPGY TP R+LP+GMR RLTNAEMTNLR L+KSLP HFALG
Sbjct: 375  VDWWGTGVLPVDGDLLPQSIPGYKTPLRILPTGMRPRLTNAEMTNLRKLAKSLPCHFALG 434

Query: 822  RNRNHQGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVI 643
            RNRNHQGLA+AI+KLWEKS+V KIA+KPGIQNTNNK+MAEEIK LTGG LLLR+K++IVI
Sbjct: 435  RNRNHQGLAAAIIKLWEKSIVVKIAVKPGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVI 494

Query: 642  YRGKDFVPTSVAAALAERQELTKEIQDAEERARGRSADT-ASIEEIEGKPLAGTLAEFHE 466
            YRGKDF+PTSVAAAL+ER+ELTK IQ  EE+ R   A+   S E+  G+PLAGTLAEF+E
Sbjct: 495  YRGKDFLPTSVAAALSEREELTKHIQVVEEKVRTGGAEAIPSGEDGVGQPLAGTLAEFYE 554

Query: 465  AKSRWGKEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVP 286
            A++RWG+E+SAEE EKM EEA+RAK+ARVV RIEHKL  AQAK+LRAERLLAKIE+SM+P
Sbjct: 555  AQARWGREISAEEHEKMIEEASRAKSARVVKRIEHKLALAQAKKLRAERLLAKIEASMIP 614

Query: 285  VRPSDDQETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQ 106
              PSDDQETITDEER MFRR+GL+MKAYL LGVRGVF GVIENMHLHWKHRELVKLISKQ
Sbjct: 615  AGPSDDQETITDEERFMFRRLGLRMKAYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQ 674

Query: 105  KTLSFVEDSARLMEYESGGILVAIERVPKGYALIY 1
            KTL+FVED+ARL+EYESGGILVAIERVPKGYALIY
Sbjct: 675  KTLAFVEDTARLLEYESGGILVAIERVPKGYALIY 709


>ref|XP_012093011.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Jatropha curcas]
            gi|802797401|ref|XP_012093012.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            [Jatropha curcas] gi|643686960|gb|KDP20125.1|
            hypothetical protein JCGZ_05894 [Jatropha curcas]
          Length = 839

 Score =  582 bits (1499), Expect = e-163
 Identities = 293/394 (74%), Positives = 338/394 (85%), Gaps = 2/394 (0%)
 Frame = -3

Query: 1176 DTFLAPHVSSADNFALRNGNDAISTSDETKLK--DMVPVESLTDEEMEYNSLLDGLGPRF 1003
            D    P VSS D   LRN +   ST  + +L    M   E++T+EE E+NSLLD LGPRF
Sbjct: 309  DALFIPDVSSPDTETLRNHDGVSSTVKKRELAIGRMNSAENMTEEEAEFNSLLDSLGPRF 368

Query: 1002 VDWWGTGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALG 823
             +WWGTG +P+DA+LLPP IPGY TPFRLLP+GMRSRLTNAEMTNLR L+K+LP HFALG
Sbjct: 369  EEWWGTGILPVDADLLPPKIPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKTLPCHFALG 428

Query: 822  RNRNHQGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVI 643
            RNRNHQGLA+AI K+WEKSLVAKIA+K GIQNTNNK+MA+E+KMLTGG LLLR+K++IVI
Sbjct: 429  RNRNHQGLAAAIRKIWEKSLVAKIAVKRGIQNTNNKLMADELKMLTGGILLLRNKYYIVI 488

Query: 642  YRGKDFVPTSVAAALAERQELTKEIQDAEERARGRSADTASIEEIEGKPLAGTLAEFHEA 463
            YRGKDF+PTSVAAALAERQELTK+IQD EE+ R R  +TA  EE +GK LAGTLAEF+EA
Sbjct: 489  YRGKDFLPTSVAAALAERQELTKQIQDVEEKVRSRGVETALSEEGQGKALAGTLAEFYEA 548

Query: 462  KSRWGKEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVPV 283
            ++RWGK +SAEE EKM E+A R+K ARVV RIEHKL  AQAK+LRAERLL+KIE+SM+P 
Sbjct: 549  QARWGKTISAEEREKMIEDAARSKRARVVKRIEHKLAVAQAKKLRAERLLSKIEASMLPS 608

Query: 282  RPSDDQETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQK 103
             P  DQETITDEER+MFRRVGL+MKAYLPLG+RGVF GVIENMHLHWKHRELVKLISKQK
Sbjct: 609  GPDYDQETITDEERAMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQK 668

Query: 102  TLSFVEDSARLMEYESGGILVAIERVPKGYALIY 1
            TL+FVED+ARL+EYESGGILVAIERVPKG+ALIY
Sbjct: 669  TLAFVEDTARLLEYESGGILVAIERVPKGFALIY 702


>ref|XP_007211308.1| hypothetical protein PRUPE_ppa001468mg [Prunus persica]
            gi|462407043|gb|EMJ12507.1| hypothetical protein
            PRUPE_ppa001468mg [Prunus persica]
          Length = 820

 Score =  581 bits (1498), Expect = e-163
 Identities = 290/389 (74%), Positives = 338/389 (86%), Gaps = 2/389 (0%)
 Frame = -3

Query: 1161 PHVSSADNFALRNGNDAISTSDETKLKDMVPVE--SLTDEEMEYNSLLDGLGPRFVDWWG 988
            P VSSA+  A R+GNDA S  D  +    +P    ++T+EE E+NSLLD LGPRFV+WWG
Sbjct: 325  PDVSSAETSATRSGNDATSGPDNNEKAVKIPAHLPNMTEEEAEFNSLLDDLGPRFVEWWG 384

Query: 987  TGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALGRNRNH 808
            TG +P+DA+LLP TIPGY TPFRLLP+GMRSRLTNAEMTNLR L+KSLP HFALGRNRNH
Sbjct: 385  TGVLPVDADLLPKTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALGRNRNH 444

Query: 807  QGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVIYRGKD 628
            QGLASAI+KLWEKS VAKIA+K GIQNTNNK+MAEE+K LTGG LLLR+K++IV YRGKD
Sbjct: 445  QGLASAIIKLWEKSSVAKIAVKRGIQNTNNKLMAEELKTLTGGVLLLRNKYYIVFYRGKD 504

Query: 627  FVPTSVAAALAERQELTKEIQDAEERARGRSADTASIEEIEGKPLAGTLAEFHEAKSRWG 448
            F+PTSVAAALAERQELTK++QD EE+ R ++ D AS    EG+ LAGTLAEF+EA++RWG
Sbjct: 505  FLPTSVAAALAERQELTKQVQDVEEKMRIKAIDAASSGAEEGQALAGTLAEFYEAQARWG 564

Query: 447  KEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVPVRPSDD 268
            +E+SAEE EKM EE ++AKNAR+V RIEHKL  AQAK+LRAE+LL+KIESSM+P  P  D
Sbjct: 565  REISAEEREKMIEEDSKAKNARLVKRIEHKLGVAQAKKLRAEKLLSKIESSMLPAGPDYD 624

Query: 267  QETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQKTLSFV 88
            QET+TDEER MFRRVGL+MKAYLPLG+RGVF GV+ENMHLHWKHRELVKLISKQKTL+FV
Sbjct: 625  QETVTDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFV 684

Query: 87   EDSARLMEYESGGILVAIERVPKGYALIY 1
            ED+ARL+E+ESGGILVAIERVPKGYALIY
Sbjct: 685  EDTARLLEFESGGILVAIERVPKGYALIY 713


>emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
          Length = 850

 Score =  580 bits (1496), Expect = e-163
 Identities = 295/395 (74%), Positives = 340/395 (86%), Gaps = 3/395 (0%)
 Frame = -3

Query: 1176 DTFLAPHVSSADNFALRNGNDAISTSDETKLKDMVPV--ESLTDEEMEYNSLLDGLGPRF 1003
            D+   P VSS DN A+RN N+   T ++  L    PV  E++T+EE EYNSLLDGLGPRF
Sbjct: 315  DSLFVPDVSSVDNPAMRNDNNGGPTLEKGSLPVRNPVHAENMTEEEAEYNSLLDGLGPRF 374

Query: 1002 VDWWGTGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALG 823
            VDWWGTG +P+D +LLP +IPGY TP R+LP+GMR RLTNAEMTNLR L+KSLP HFALG
Sbjct: 375  VDWWGTGVLPVDGDLLPQSIPGYKTPLRILPTGMRPRLTNAEMTNLRKLAKSLPCHFALG 434

Query: 822  RNRNHQGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVI 643
            RNRNHQGLA+AI+KLWEKS+V KIA+KPGIQNTNNK+MAEEIK LTGG LLLR+K++IVI
Sbjct: 435  RNRNHQGLAAAIIKLWEKSIVVKIAVKPGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVI 494

Query: 642  YRGKDFVPTSVAAALAERQELTKEIQDAEERARGRSADT-ASIEEIEGKPLAGTLAEFHE 466
            YRGKDF+PTSVAAAL+ER+ELTK IQ  EE+ R   A+   S E+  G+PLAGTLAEF+E
Sbjct: 495  YRGKDFLPTSVAAALSEREELTKHIQVVEEKVRTGGAEAIPSGEDGVGQPLAGTLAEFYE 554

Query: 465  AKSRWGKEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVP 286
            A++RWG+E+SAEE EKM EEA+RAK+ARVV RIEHKL  AQAK+LR ERLLAKIE+SM+P
Sbjct: 555  AQARWGREISAEEHEKMIEEASRAKSARVVKRIEHKLALAQAKKLRPERLLAKIEASMIP 614

Query: 285  VRPSDDQETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQ 106
              PSDDQETITDEER MFRR+GL+MKAYL LGVRGVF GVIENMHLHWKHRELVKLISKQ
Sbjct: 615  AGPSDDQETITDEERFMFRRLGLRMKAYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQ 674

Query: 105  KTLSFVEDSARLMEYESGGILVAIERVPKGYALIY 1
            KTL+FVED+ARL+EYESGGILVAIERVPKGYALIY
Sbjct: 675  KTLAFVEDTARLLEYESGGILVAIERVPKGYALIY 709


>ref|XP_008374754.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Malus domestica]
          Length = 827

 Score =  579 bits (1493), Expect = e-162
 Identities = 290/389 (74%), Positives = 339/389 (87%), Gaps = 2/389 (0%)
 Frame = -3

Query: 1161 PHVSSADNFALRNGNDAISTSDETKLKDMVP--VESLTDEEMEYNSLLDGLGPRFVDWWG 988
            P VSSA+   +R+GNDA S  D+T+    +P  V ++T+EE E++SLLD LGPRF +WWG
Sbjct: 326  PDVSSAETSVMRSGNDATSGPDKTEQALKIPERVHNMTEEEAEFHSLLDDLGPRFEEWWG 385

Query: 987  TGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALGRNRNH 808
            TG +P+DA+LLP TIPGY TPFRLLP+GMRSRLTNAEMT LR L+KSLP HFALGRNRNH
Sbjct: 386  TGVLPVDADLLPKTIPGYKTPFRLLPTGMRSRLTNAEMTTLRKLAKSLPCHFALGRNRNH 445

Query: 807  QGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVIYRGKD 628
            QGLA AI+KLWEKS VAKIA+K GIQNTNNK+MAEEIK LTGG LLLR+K++IVIYRGKD
Sbjct: 446  QGLALAIIKLWEKSSVAKIAVKRGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKD 505

Query: 627  FVPTSVAAALAERQELTKEIQDAEERARGRSADTASIEEIEGKPLAGTLAEFHEAKSRWG 448
            F+PTSVAAALAERQELTK++QD EE+ R ++ D AS   +EG+ LAGTLAEF+EA++RWG
Sbjct: 506  FLPTSVAAALAERQELTKQVQDVEEKMRIKAIDAASSGAVEGQALAGTLAEFYEAQARWG 565

Query: 447  KEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVPVRPSDD 268
            +E+SAEE EKM EE +RAKNA++V RIEHKL  AQAK+LRAE+LL+KIES M+P  P  D
Sbjct: 566  REISAEEREKMIEEDSRAKNAKLVRRIEHKLGVAQAKKLRAEKLLSKIESLMLPAGPDYD 625

Query: 267  QETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQKTLSFV 88
            QETITDEER MFRRVGL+MKAYLPLG+RGVF GV+ENMHLHWKHRELVKLISKQKTL+FV
Sbjct: 626  QETITDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFV 685

Query: 87   EDSARLMEYESGGILVAIERVPKGYALIY 1
            ED+ARL+EYESGGILVAIERVPKGYALIY
Sbjct: 686  EDTARLLEYESGGILVAIERVPKGYALIY 714


>ref|XP_009360154.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Pyrus x bretschneideri]
          Length = 824

 Score =  578 bits (1489), Expect = e-162
 Identities = 288/389 (74%), Positives = 339/389 (87%), Gaps = 2/389 (0%)
 Frame = -3

Query: 1161 PHVSSADNFALRNGNDAISTSDETKLKDMVP--VESLTDEEMEYNSLLDGLGPRFVDWWG 988
            P +SS +   +R+GN+A S  D+T+    +P  V ++T+EE E++SLLD LGPRFV+WWG
Sbjct: 325  PEISSPETSEMRSGNEATSGPDKTEQALKIPERVHNMTEEEAEFHSLLDDLGPRFVEWWG 384

Query: 987  TGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALGRNRNH 808
            TG +P+DA+LLP TIPGY TPFRLLP+GMRSRLTNAEMT LR L+KSLP HFALGRNRNH
Sbjct: 385  TGVLPVDADLLPKTIPGYKTPFRLLPTGMRSRLTNAEMTTLRKLAKSLPCHFALGRNRNH 444

Query: 807  QGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVIYRGKD 628
            QGLA AI+KLWEKS VAKIA+K GIQNTNNK+MAEEIK LTGG LLLR+K++IVIYRGKD
Sbjct: 445  QGLALAIIKLWEKSSVAKIAVKRGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKD 504

Query: 627  FVPTSVAAALAERQELTKEIQDAEERARGRSADTASIEEIEGKPLAGTLAEFHEAKSRWG 448
            FVPTSVAAAL+ERQELTK++QD EE+ R ++ D AS   +EG+ LAGTLAEF+EA++RWG
Sbjct: 505  FVPTSVAAALSERQELTKQVQDVEEKMRIKAIDAASSGAVEGQALAGTLAEFYEAQARWG 564

Query: 447  KEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVPVRPSDD 268
            +E+SAEE EKM EE +RAKNA++V RIEHKL  AQAK+LRAE+LL+KIES M+P  P  D
Sbjct: 565  REISAEEREKMIEEDSRAKNAKLVRRIEHKLGVAQAKKLRAEKLLSKIESLMLPAGPDYD 624

Query: 267  QETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQKTLSFV 88
            QETITDEER MFRRVGL+MKAYLPLG+RGVF GV+ENMHLHWKHRELVKLISKQKTL+FV
Sbjct: 625  QETITDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFV 684

Query: 87   EDSARLMEYESGGILVAIERVPKGYALIY 1
            ED+ARL+EYESGGILVAIERVPKGYALIY
Sbjct: 685  EDTARLLEYESGGILVAIERVPKGYALIY 713


>ref|XP_009347186.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Pyrus x bretschneideri]
          Length = 832

 Score =  577 bits (1487), Expect = e-162
 Identities = 289/389 (74%), Positives = 337/389 (86%), Gaps = 2/389 (0%)
 Frame = -3

Query: 1161 PHVSSADNFALRNGNDAISTSDETKLKDMVP--VESLTDEEMEYNSLLDGLGPRFVDWWG 988
            P VSSA+    R+GNDA S  D T+    +P  V ++T+EE E++SLLD LGPRF +WWG
Sbjct: 329  PDVSSAETSVTRSGNDATSGPDNTEQALKIPERVHNMTEEEAEFHSLLDDLGPRFEEWWG 388

Query: 987  TGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALGRNRNH 808
            TG +P+DA+LLP TIPGY TPFRLLP+GMRSRLTNAEMT LR L+KSLP HFALGRNRNH
Sbjct: 389  TGVLPVDADLLPKTIPGYKTPFRLLPTGMRSRLTNAEMTTLRKLAKSLPCHFALGRNRNH 448

Query: 807  QGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVIYRGKD 628
            QGLA AI+KLWEKS VAKIA+K GIQNTNNK+MAEEIK LTGG LLLR+K++IVIYRGKD
Sbjct: 449  QGLALAIIKLWEKSSVAKIAVKRGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKD 508

Query: 627  FVPTSVAAALAERQELTKEIQDAEERARGRSADTASIEEIEGKPLAGTLAEFHEAKSRWG 448
            F+PTSVAAALAERQELTK++QD EE+ R ++ D AS   +EG+ LAGTLAEF+EA++RWG
Sbjct: 509  FLPTSVAAALAERQELTKQVQDVEEKMRIKAIDAASTGAVEGQALAGTLAEFYEAQARWG 568

Query: 447  KEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVPVRPSDD 268
            +E+SAEE E+M EE +RAKNA++V RIEHKL  AQAK+LRAE+LL+KIES M+P  P  D
Sbjct: 569  REISAEERERMIEEDSRAKNAKLVRRIEHKLGVAQAKKLRAEKLLSKIESLMLPAGPDYD 628

Query: 267  QETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQKTLSFV 88
            QETITDEER MFRRVGL+MKAYLPLG+RGVF GV+ENMHLHWKHRELVKLISKQKTL+FV
Sbjct: 629  QETITDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFV 688

Query: 87   EDSARLMEYESGGILVAIERVPKGYALIY 1
            ED+ARL+EYESGGILVAIERVPKGYALIY
Sbjct: 689  EDTARLLEYESGGILVAIERVPKGYALIY 717


>ref|XP_008393315.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Malus domestica]
          Length = 813

 Score =  576 bits (1484), Expect = e-161
 Identities = 287/389 (73%), Positives = 338/389 (86%), Gaps = 2/389 (0%)
 Frame = -3

Query: 1161 PHVSSADNFALRNGNDAISTSDETKLKDMVP--VESLTDEEMEYNSLLDGLGPRFVDWWG 988
            P +SS +   +R+GN+A S  D+T+    +P  V ++T+EE E++SLLD LGPRFV+WWG
Sbjct: 327  PEISSPETSEMRSGNEATSGPDKTEQALKIPERVHNMTEEEAEFHSLLDDLGPRFVEWWG 386

Query: 987  TGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALGRNRNH 808
            TG +P+DA+LLP TIPGY TPFRLLP+GMRSRLTNAE T LR L+KSLP HFALGRNRNH
Sbjct: 387  TGVLPVDADLLPKTIPGYKTPFRLLPTGMRSRLTNAEXTTLRKLAKSLPCHFALGRNRNH 446

Query: 807  QGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVIYRGKD 628
            QGLA AI+KLWEKS VAKIA+K GIQNTNNK+MAEEIK LTGG LLLR+K++IVIYRGKD
Sbjct: 447  QGLALAIIKLWEKSSVAKIAVKRGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKD 506

Query: 627  FVPTSVAAALAERQELTKEIQDAEERARGRSADTASIEEIEGKPLAGTLAEFHEAKSRWG 448
            FVPTSVAAAL+ERQELTK++QD EE+ R ++ D AS   +EG+ LAGTLAEF+EA++RWG
Sbjct: 507  FVPTSVAAALSERQELTKQVQDVEEKVRIKAIDAASSGAVEGQALAGTLAEFYEAQARWG 566

Query: 447  KEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVPVRPSDD 268
            +E+SAEE EKM EE +RAKNA++V RIEHKL  AQAK+LRAE+LL+KIES M+P  P  D
Sbjct: 567  REISAEEREKMIEEDSRAKNAKLVRRIEHKLGVAQAKKLRAEKLLSKIESLMLPAGPDYD 626

Query: 267  QETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQKTLSFV 88
            QETITDEER MFRRVGL+MKAYLPLG+RGVF GV+ENMHLHWKHRELVKLISKQKTL+FV
Sbjct: 627  QETITDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFV 686

Query: 87   EDSARLMEYESGGILVAIERVPKGYALIY 1
            ED+ARL+EYESGGILVAIERVPKGYALIY
Sbjct: 687  EDTARLLEYESGGILVAIERVPKGYALIY 715


>ref|XP_011045860.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Populus euphratica]
          Length = 802

 Score =  572 bits (1474), Expect = e-160
 Identities = 283/394 (71%), Positives = 337/394 (85%), Gaps = 2/394 (0%)
 Frame = -3

Query: 1176 DTFLAPHVSSADNFALRNGNDAISTSDETKLKDMV--PVESLTDEEMEYNSLLDGLGPRF 1003
            D    P VSS D+   R+ N A S+S+++KL   +  P E++T+EE E NSLLDGLGPRF
Sbjct: 303  DALFVPDVSSTDSVITRSSNIATSSSEKSKLVMRITEPTENMTEEEAELNSLLDGLGPRF 362

Query: 1002 VDWWGTGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALG 823
             +WWGTG +P+DA+LLPP +PGY TPFRLLP GMR+RLTNAEMTN+R L+K+LP HFALG
Sbjct: 363  EEWWGTGLLPVDADLLPPKVPGYKTPFRLLPVGMRARLTNAEMTNMRKLAKALPCHFALG 422

Query: 822  RNRNHQGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVI 643
            RNRNHQGLA AI+KLWEKSLVAKIA+K GIQNTNNK+MA+E+KMLTGG LLLR+K++IVI
Sbjct: 423  RNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMADELKMLTGGVLLLRNKYYIVI 482

Query: 642  YRGKDFVPTSVAAALAERQELTKEIQDAEERARGRSADTASIEEIEGKPLAGTLAEFHEA 463
            +RGKDF+P SVAAALAERQE TK+IQD EER R  S + A   E EGK LAGTLAEF+EA
Sbjct: 483  FRGKDFLPQSVAAALAERQEATKQIQDVEERVRSNSVEAAPSGEDEGKALAGTLAEFYEA 542

Query: 462  KSRWGKEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVPV 283
            ++RWG+++S EE EKM EEA++AK AR+V R EHKL  AQAK+LRAERLL+KIE++MVP 
Sbjct: 543  QARWGRDISTEEREKMIEEASKAKTARLVKRTEHKLAIAQAKKLRAERLLSKIETTMVPS 602

Query: 282  RPSDDQETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQK 103
             P  DQETI++EER MFRRVGL+MKAYLPLG+RGVF GVIENMHLHWKHRELVKLISKQK
Sbjct: 603  GPDFDQETISEEERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQK 662

Query: 102  TLSFVEDSARLMEYESGGILVAIERVPKGYALIY 1
            TL+FVED+A+L+EYESGG+LVAIERVPKG+ALIY
Sbjct: 663  TLAFVEDTAKLLEYESGGVLVAIERVPKGFALIY 696


>ref|XP_011045859.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Populus euphratica]
          Length = 806

 Score =  572 bits (1474), Expect = e-160
 Identities = 283/394 (71%), Positives = 337/394 (85%), Gaps = 2/394 (0%)
 Frame = -3

Query: 1176 DTFLAPHVSSADNFALRNGNDAISTSDETKLKDMV--PVESLTDEEMEYNSLLDGLGPRF 1003
            D    P VSS D+   R+ N A S+S+++KL   +  P E++T+EE E NSLLDGLGPRF
Sbjct: 303  DALFVPDVSSTDSVITRSSNIATSSSEKSKLVMRITEPTENMTEEEAELNSLLDGLGPRF 362

Query: 1002 VDWWGTGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALG 823
             +WWGTG +P+DA+LLPP +PGY TPFRLLP GMR+RLTNAEMTN+R L+K+LP HFALG
Sbjct: 363  EEWWGTGLLPVDADLLPPKVPGYKTPFRLLPVGMRARLTNAEMTNMRKLAKALPCHFALG 422

Query: 822  RNRNHQGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVI 643
            RNRNHQGLA AI+KLWEKSLVAKIA+K GIQNTNNK+MA+E+KMLTGG LLLR+K++IVI
Sbjct: 423  RNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMADELKMLTGGVLLLRNKYYIVI 482

Query: 642  YRGKDFVPTSVAAALAERQELTKEIQDAEERARGRSADTASIEEIEGKPLAGTLAEFHEA 463
            +RGKDF+P SVAAALAERQE TK+IQD EER R  S + A   E EGK LAGTLAEF+EA
Sbjct: 483  FRGKDFLPQSVAAALAERQEATKQIQDVEERVRSNSVEAAPSGEDEGKALAGTLAEFYEA 542

Query: 462  KSRWGKEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVPV 283
            ++RWG+++S EE EKM EEA++AK AR+V R EHKL  AQAK+LRAERLL+KIE++MVP 
Sbjct: 543  QARWGRDISTEEREKMIEEASKAKTARLVKRTEHKLAIAQAKKLRAERLLSKIETTMVPS 602

Query: 282  RPSDDQETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQK 103
             P  DQETI++EER MFRRVGL+MKAYLPLG+RGVF GVIENMHLHWKHRELVKLISKQK
Sbjct: 603  GPDFDQETISEEERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQK 662

Query: 102  TLSFVEDSARLMEYESGGILVAIERVPKGYALIY 1
            TL+FVED+A+L+EYESGG+LVAIERVPKG+ALIY
Sbjct: 663  TLAFVEDTAKLLEYESGGVLVAIERVPKGFALIY 696


>ref|XP_012440292.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Gossypium raimondii]
          Length = 854

 Score =  570 bits (1470), Expect = e-160
 Identities = 284/392 (72%), Positives = 334/392 (85%)
 Frame = -3

Query: 1176 DTFLAPHVSSADNFALRNGNDAISTSDETKLKDMVPVESLTDEEMEYNSLLDGLGPRFVD 997
            +    P VSSA       G+ + S   +  +      ES+T+EE EYNSLLDGLGPRFV+
Sbjct: 309  EALFIPDVSSAGKRESETGSGSTSEKSDKVVVKPERSESMTEEEAEYNSLLDGLGPRFVE 368

Query: 996  WWGTGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALGRN 817
            WWGTG +P+DA+LLPP IPGY TPFRLLP+GMR RLTNAEMTNLR ++KSLP HFALGRN
Sbjct: 369  WWGTGILPVDADLLPPKIPGYKTPFRLLPAGMRPRLTNAEMTNLRKIAKSLPCHFALGRN 428

Query: 816  RNHQGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVIYR 637
            RNHQGLA+AI+KLWEKS+VAKIA+K GIQNTNNK+MAEE+K LTGG LLLR+K+FIVIYR
Sbjct: 429  RNHQGLAAAIIKLWEKSVVAKIAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYFIVIYR 488

Query: 636  GKDFVPTSVAAALAERQELTKEIQDAEERARGRSADTASIEEIEGKPLAGTLAEFHEAKS 457
            GKDF+PT+VAAALAERQ+LTK+IQDAEE+ R ++ + A   E +G+  AGTLAEF+EA++
Sbjct: 489  GKDFLPTNVAAALAERQDLTKQIQDAEEKLRIKAVEPAQSGEDKGQAPAGTLAEFYEAQA 548

Query: 456  RWGKEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVPVRP 277
            RWG+++SAEE EKM EEA++AK+A++V R+EHKL  AQAK+LRAERLLAKIE+SM+P  P
Sbjct: 549  RWGRDISAEEREKMIEEASKAKHAKLVKRVEHKLAIAQAKKLRAERLLAKIEASMIPAAP 608

Query: 276  SDDQETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQKTL 97
              DQETITDEER MFRRVGL+MK YLPLGVRGVF GVIENMHLHWKHRELVKLISKQK L
Sbjct: 609  DYDQETITDEERVMFRRVGLRMKPYLPLGVRGVFDGVIENMHLHWKHRELVKLISKQKVL 668

Query: 96   SFVEDSARLMEYESGGILVAIERVPKGYALIY 1
            +FVEDSARL+EYESGGILVAIERVPKGYALIY
Sbjct: 669  AFVEDSARLLEYESGGILVAIERVPKGYALIY 700


>ref|XP_012440291.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Gossypium raimondii]
          Length = 854

 Score =  570 bits (1470), Expect = e-160
 Identities = 284/392 (72%), Positives = 334/392 (85%)
 Frame = -3

Query: 1176 DTFLAPHVSSADNFALRNGNDAISTSDETKLKDMVPVESLTDEEMEYNSLLDGLGPRFVD 997
            +    P VSSA       G+ + S   +  +      ES+T+EE EYNSLLDGLGPRFV+
Sbjct: 309  EALFIPDVSSAGKRESETGSGSTSEKSDKVVVKPERSESMTEEEAEYNSLLDGLGPRFVE 368

Query: 996  WWGTGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALGRN 817
            WWGTG +P+DA+LLPP IPGY TPFRLLP+GMR RLTNAEMTNLR ++KSLP HFALGRN
Sbjct: 369  WWGTGILPVDADLLPPKIPGYKTPFRLLPAGMRPRLTNAEMTNLRKIAKSLPCHFALGRN 428

Query: 816  RNHQGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVIYR 637
            RNHQGLA+AI+KLWEKS+VAKIA+K GIQNTNNK+MAEE+K LTGG LLLR+K+FIVIYR
Sbjct: 429  RNHQGLAAAIIKLWEKSVVAKIAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYFIVIYR 488

Query: 636  GKDFVPTSVAAALAERQELTKEIQDAEERARGRSADTASIEEIEGKPLAGTLAEFHEAKS 457
            GKDF+PT+VAAALAERQ+LTK+IQDAEE+ R ++ + A   E +G+  AGTLAEF+EA++
Sbjct: 489  GKDFLPTNVAAALAERQDLTKQIQDAEEKLRIKAVEPAQSGEDKGQAPAGTLAEFYEAQA 548

Query: 456  RWGKEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVPVRP 277
            RWG+++SAEE EKM EEA++AK+A++V R+EHKL  AQAK+LRAERLLAKIE+SM+P  P
Sbjct: 549  RWGRDISAEEREKMIEEASKAKHAKLVKRVEHKLAIAQAKKLRAERLLAKIEASMIPAAP 608

Query: 276  SDDQETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQKTL 97
              DQETITDEER MFRRVGL+MK YLPLGVRGVF GVIENMHLHWKHRELVKLISKQK L
Sbjct: 609  DYDQETITDEERVMFRRVGLRMKPYLPLGVRGVFDGVIENMHLHWKHRELVKLISKQKVL 668

Query: 96   SFVEDSARLMEYESGGILVAIERVPKGYALIY 1
            +FVEDSARL+EYESGGILVAIERVPKGYALIY
Sbjct: 669  AFVEDSARLLEYESGGILVAIERVPKGYALIY 700


>ref|XP_012440290.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Gossypium raimondii]
            gi|763785914|gb|KJB52985.1| hypothetical protein
            B456_008G286900 [Gossypium raimondii]
          Length = 868

 Score =  570 bits (1470), Expect = e-160
 Identities = 284/392 (72%), Positives = 334/392 (85%)
 Frame = -3

Query: 1176 DTFLAPHVSSADNFALRNGNDAISTSDETKLKDMVPVESLTDEEMEYNSLLDGLGPRFVD 997
            +    P VSSA       G+ + S   +  +      ES+T+EE EYNSLLDGLGPRFV+
Sbjct: 309  EALFIPDVSSAGKRESETGSGSTSEKSDKVVVKPERSESMTEEEAEYNSLLDGLGPRFVE 368

Query: 996  WWGTGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALGRN 817
            WWGTG +P+DA+LLPP IPGY TPFRLLP+GMR RLTNAEMTNLR ++KSLP HFALGRN
Sbjct: 369  WWGTGILPVDADLLPPKIPGYKTPFRLLPAGMRPRLTNAEMTNLRKIAKSLPCHFALGRN 428

Query: 816  RNHQGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVIYR 637
            RNHQGLA+AI+KLWEKS+VAKIA+K GIQNTNNK+MAEE+K LTGG LLLR+K+FIVIYR
Sbjct: 429  RNHQGLAAAIIKLWEKSVVAKIAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYFIVIYR 488

Query: 636  GKDFVPTSVAAALAERQELTKEIQDAEERARGRSADTASIEEIEGKPLAGTLAEFHEAKS 457
            GKDF+PT+VAAALAERQ+LTK+IQDAEE+ R ++ + A   E +G+  AGTLAEF+EA++
Sbjct: 489  GKDFLPTNVAAALAERQDLTKQIQDAEEKLRIKAVEPAQSGEDKGQAPAGTLAEFYEAQA 548

Query: 456  RWGKEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVPVRP 277
            RWG+++SAEE EKM EEA++AK+A++V R+EHKL  AQAK+LRAERLLAKIE+SM+P  P
Sbjct: 549  RWGRDISAEEREKMIEEASKAKHAKLVKRVEHKLAIAQAKKLRAERLLAKIEASMIPAAP 608

Query: 276  SDDQETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQKTL 97
              DQETITDEER MFRRVGL+MK YLPLGVRGVF GVIENMHLHWKHRELVKLISKQK L
Sbjct: 609  DYDQETITDEERVMFRRVGLRMKPYLPLGVRGVFDGVIENMHLHWKHRELVKLISKQKVL 668

Query: 96   SFVEDSARLMEYESGGILVAIERVPKGYALIY 1
            +FVEDSARL+EYESGGILVAIERVPKGYALIY
Sbjct: 669  AFVEDSARLLEYESGGILVAIERVPKGYALIY 700


>gb|KHG01961.1| Chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Gossypium arboreum]
          Length = 823

 Score =  570 bits (1470), Expect = e-160
 Identities = 284/392 (72%), Positives = 334/392 (85%)
 Frame = -3

Query: 1176 DTFLAPHVSSADNFALRNGNDAISTSDETKLKDMVPVESLTDEEMEYNSLLDGLGPRFVD 997
            +    P VSSA       G+ + S   +  +      ES+T+EE EYNSLLDGLGPRFV+
Sbjct: 310  EALFIPDVSSAGKRESETGSASTSEKSDKVVVKPECSESMTEEEAEYNSLLDGLGPRFVE 369

Query: 996  WWGTGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALGRN 817
            WWGTG +P+DA+LLPP IPGY TPFRLLP+GMR RLTNAEMTNLR ++KSLP HFALGRN
Sbjct: 370  WWGTGILPVDADLLPPKIPGYKTPFRLLPAGMRPRLTNAEMTNLRKIAKSLPCHFALGRN 429

Query: 816  RNHQGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVIYR 637
            RNHQGLA+AI+KLWEKSLVAKIA+K GIQNTNNK+MAEE+K LTGG LLLR+K+FIVIYR
Sbjct: 430  RNHQGLAAAIIKLWEKSLVAKIAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYFIVIYR 489

Query: 636  GKDFVPTSVAAALAERQELTKEIQDAEERARGRSADTASIEEIEGKPLAGTLAEFHEAKS 457
            GKDF+PT+VAAALAERQ+LTK+IQDAEE+ R ++ + A   E +G+  AGTLAEF+EA++
Sbjct: 490  GKDFLPTNVAAALAERQDLTKQIQDAEEKLRIKAVEPAQSGEDKGQAPAGTLAEFYEAQA 549

Query: 456  RWGKEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVPVRP 277
            RWG+++SAEE EKM EEA++AK+A+++ R+EHKL  AQAK+LRAERLLAKIE+SM+P  P
Sbjct: 550  RWGRDISAEEREKMIEEASKAKHAKLIKRVEHKLAIAQAKKLRAERLLAKIEASMIPAAP 609

Query: 276  SDDQETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQKTL 97
              DQETITDEER MFRRVGL+MK YLPLGVRGVF GVIENMHLHWKHRELVKLISKQK L
Sbjct: 610  DYDQETITDEERVMFRRVGLRMKPYLPLGVRGVFDGVIENMHLHWKHRELVKLISKQKVL 669

Query: 96   SFVEDSARLMEYESGGILVAIERVPKGYALIY 1
            +FVEDSARL+EYESGGILVAIERVPKGYALIY
Sbjct: 670  AFVEDSARLLEYESGGILVAIERVPKGYALIY 701


>ref|XP_007036533.1| CRS1 / YhbY domain-containing protein [Theobroma cacao]
            gi|508773778|gb|EOY21034.1| CRS1 / YhbY domain-containing
            protein [Theobroma cacao]
          Length = 919

 Score =  569 bits (1467), Expect = e-159
 Identities = 291/396 (73%), Positives = 338/396 (85%), Gaps = 4/396 (1%)
 Frame = -3

Query: 1176 DTFLAPHVSSADNFALRNGNDAISTSDETKLKDMVPV----ESLTDEEMEYNSLLDGLGP 1009
            +    P VSSA N A+R G++   TS   K + +V      ES+T+EE EYNSLLDG+GP
Sbjct: 383  EALFIPDVSSASN-AVR-GSETGKTSTPEKCEPVVVKPERSESMTEEEAEYNSLLDGVGP 440

Query: 1008 RFVDWWGTGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFA 829
            RFV+WWGTG +P+DA+LLP  IPGY TPFRLLP+GMR RLTNAEMTNLR L+KSLP HFA
Sbjct: 441  RFVEWWGTGVLPVDADLLPQKIPGYKTPFRLLPAGMRPRLTNAEMTNLRKLAKSLPCHFA 500

Query: 828  LGRNRNHQGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFI 649
            LGRNRNHQGLA+AI+KLWEKSLV KIA+K GIQNTNNK+MAEE+K LTGG LLLR+K+FI
Sbjct: 501  LGRNRNHQGLAAAIIKLWEKSLVVKIAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYFI 560

Query: 648  VIYRGKDFVPTSVAAALAERQELTKEIQDAEERARGRSADTASIEEIEGKPLAGTLAEFH 469
            VIYRGKDF+PTSVAAALAERQELTK+IQD EE+ R R+ + A   E +G+  AGTLAEF+
Sbjct: 561  VIYRGKDFLPTSVAAALAERQELTKQIQDVEEKVRIRAVEPAQSGEDKGEAPAGTLAEFY 620

Query: 468  EAKSRWGKEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMV 289
            EA++ WG+E+SAEE EKM EEA++AK+AR+V R+EHKL  AQAK+LRAERLLAKIESSM+
Sbjct: 621  EAQACWGREISAEEREKMIEEASKAKHARLVKRVEHKLAVAQAKKLRAERLLAKIESSMI 680

Query: 288  PVRPSDDQETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISK 109
            P  P  DQETITDEER MFRRVGL+MK YLPLG+RGVF GVIENMHLHWKHRELVKLISK
Sbjct: 681  PAAPDYDQETITDEERVMFRRVGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLISK 740

Query: 108  QKTLSFVEDSARLMEYESGGILVAIERVPKGYALIY 1
            QKTL+FVED+ARL+E+ESGGILVAIERVPKGYALIY
Sbjct: 741  QKTLAFVEDTARLLEFESGGILVAIERVPKGYALIY 776


>ref|XP_002532154.1| conserved hypothetical protein [Ricinus communis]
            gi|223528164|gb|EEF30228.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 745

 Score =  568 bits (1465), Expect = e-159
 Identities = 283/394 (71%), Positives = 334/394 (84%), Gaps = 2/394 (0%)
 Frame = -3

Query: 1176 DTFLAPHVSSADNFALRNGNDAISTSDETKL--KDMVPVESLTDEEMEYNSLLDGLGPRF 1003
            D    P VSSA +  ++  N A S +++ +L  + +   + +T+EE+EY+S LD LGPRF
Sbjct: 312  DALFIPDVSSAGSETMKGDNVAPSAAEKRELAMRRLDHSKDMTEEEIEYDSFLDSLGPRF 371

Query: 1002 VDWWGTGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFALG 823
             +WWGTG +P+DA+LLPP IP Y TPFRLLP+GMRSRLTNAEMTNLR L+K LP HFALG
Sbjct: 372  EEWWGTGILPVDADLLPPKIPDYKTPFRLLPTGMRSRLTNAEMTNLRKLAKKLPCHFALG 431

Query: 822  RNRNHQGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIVI 643
            RNRNHQGLAS I+K+WEKSLVAKIA+K GIQNTNNK+MA+E+KMLTGG LLLR+K++IVI
Sbjct: 432  RNRNHQGLASTILKVWEKSLVAKIAVKRGIQNTNNKLMADELKMLTGGVLLLRNKYYIVI 491

Query: 642  YRGKDFVPTSVAAALAERQELTKEIQDAEERARGRSADTASIEEIEGKPLAGTLAEFHEA 463
            YRGKDF+PTSVAAAL ERQELTK+IQD EE+ R R  +    +E EGKPLAGTLAEF+EA
Sbjct: 492  YRGKDFLPTSVAAALTERQELTKKIQDVEEKVRSREIEAVPSKEEEGKPLAGTLAEFYEA 551

Query: 462  KSRWGKEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVPV 283
            +SRWGK+ SAE+ EKM E+ TRAK AR+V RIEHKL  AQAK+LRAERLLAKIE SM+P 
Sbjct: 552  QSRWGKDTSAEDREKMIEDDTRAKRARIVKRIEHKLAVAQAKKLRAERLLAKIEVSMLPS 611

Query: 282  RPSDDQETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQK 103
             P  DQETITDEER++FRR+GL+MKAYLPLG+RGVF GVIENMHLHWKHRELVKLISKQK
Sbjct: 612  GPDYDQETITDEERAVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQK 671

Query: 102  TLSFVEDSARLMEYESGGILVAIERVPKGYALIY 1
            TL+F ED+ARL+EYESGGILVAIERVPKG+ALIY
Sbjct: 672  TLAFAEDTARLLEYESGGILVAIERVPKGFALIY 705


>ref|XP_004300521.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Fragaria vesca subsp. vesca]
          Length = 820

 Score =  568 bits (1465), Expect = e-159
 Identities = 289/395 (73%), Positives = 332/395 (84%), Gaps = 3/395 (0%)
 Frame = -3

Query: 1176 DTFLAPHVSSADNFALRNGNDAISTSDETKLKDMVPV---ESLTDEEMEYNSLLDGLGPR 1006
            D    P VSSA+    R GNDA S  D+T+    +P    + +TDEE E+NSLLD LGPR
Sbjct: 319  DALFIPDVSSAETSVTRGGNDATSAPDKTEQAVKIPEPLPKKMTDEEAEFNSLLDELGPR 378

Query: 1005 FVDWWGTGWVPIDAELLPPTIPGYTTPFRLLPSGMRSRLTNAEMTNLRNLSKSLPSHFAL 826
            FV++WGTG +P+DA+LLP TIPGY TPFRLLP+GMRSRLTNAEMTNLR L+KS+P HFAL
Sbjct: 379  FVEYWGTGILPVDADLLPKTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSIPCHFAL 438

Query: 825  GRNRNHQGLASAIVKLWEKSLVAKIAIKPGIQNTNNKIMAEEIKMLTGGTLLLRDKFFIV 646
            GRNRNHQGLASAI+K+WEKS VAKIA+K GIQNTNNKIMAEE+K LTGG LLLR+K++IV
Sbjct: 439  GRNRNHQGLASAILKVWEKSSVAKIAVKRGIQNTNNKIMAEELKALTGGVLLLRNKYYIV 498

Query: 645  IYRGKDFVPTSVAAALAERQELTKEIQDAEERARGRSADTASIEEIEGKPLAGTLAEFHE 466
            IYRGKDFVPT+VA ALAERQELTK++QD EE  R +  D A+    EG+ LAGTLAEF+E
Sbjct: 499  IYRGKDFVPTTVATALAERQELTKQVQDVEEIVRIKPIDAAASSTEEGQALAGTLAEFYE 558

Query: 465  AKSRWGKEVSAEELEKMKEEATRAKNARVVNRIEHKLVAAQAKQLRAERLLAKIESSMVP 286
            A++RWG+E+SAEE +KM EE ++AK AR   RIEHKL  AQAK+LRAE LL KIES+M+P
Sbjct: 559  AQARWGREISAEERKKMIEEDSKAKMARRAKRIEHKLGVAQAKKLRAESLLNKIESAMLP 618

Query: 285  VRPSDDQETITDEERSMFRRVGLKMKAYLPLGVRGVFAGVIENMHLHWKHRELVKLISKQ 106
              P  DQETITDEER MFRRVGL+MKAYLPLG+RGVF GVIENMHLHWKHRELVKLISKQ
Sbjct: 619  AGPDYDQETITDEERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQ 678

Query: 105  KTLSFVEDSARLMEYESGGILVAIERVPKGYALIY 1
            KTL+FVEDSARL+EYESGGILVAIERVPKGYALIY
Sbjct: 679  KTLAFVEDSARLLEYESGGILVAIERVPKGYALIY 713