BLASTX nr result

ID: Aconitum23_contig00023225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00023225
         (667 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010917935.1| PREDICTED: nuclear pore complex protein NUP1...    60   9e-07
ref|XP_010917934.1| PREDICTED: nuclear pore complex protein NUP1...    60   9e-07

>ref|XP_010917935.1| PREDICTED: nuclear pore complex protein NUP1-like isoform X2 [Elaeis
            guineensis]
          Length = 1352

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 44/118 (37%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
 Frame = -2

Query: 534  TPPSTAFSGFGVVNPAPSFGSASMGNDQMSTEKSMNEHIVLAS--TXXXXXXXXXXXXXX 361
            T  ST+ S FGV NPA S GS S GNDQM+ E SM +    AS                 
Sbjct: 1220 TISSTSSSPFGVQNPAASVGSVSPGNDQMNVEDSMADDTTQASAPVVPTFGQQTNLTATP 1279

Query: 360  XXXXXXXXXXXXXXSMFQFNSQQDPTTSQNPSP-------------GFTMGAGGGDKS 226
                          S+FQF SQQ+    QNPSP              F++G+GGGDKS
Sbjct: 1280 SFMFGSPAAPSGGPSIFQFGSQQNTNNPQNPSPFQAAGSLEFAAGGSFSLGSGGGDKS 1337


>ref|XP_010917934.1| PREDICTED: nuclear pore complex protein NUP1-like isoform X1 [Elaeis
            guineensis]
          Length = 1353

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 44/118 (37%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
 Frame = -2

Query: 534  TPPSTAFSGFGVVNPAPSFGSASMGNDQMSTEKSMNEHIVLAS--TXXXXXXXXXXXXXX 361
            T  ST+ S FGV NPA S GS S GNDQM+ E SM +    AS                 
Sbjct: 1221 TISSTSSSPFGVQNPAASVGSVSPGNDQMNVEDSMADDTTQASAPVVPTFGQQTNLTATP 1280

Query: 360  XXXXXXXXXXXXXXSMFQFNSQQDPTTSQNPSP-------------GFTMGAGGGDKS 226
                          S+FQF SQQ+    QNPSP              F++G+GGGDKS
Sbjct: 1281 SFMFGSPAAPSGGPSIFQFGSQQNTNNPQNPSPFQAAGSLEFAAGGSFSLGSGGGDKS 1338


Top