BLASTX nr result

ID: Aconitum23_contig00022856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00022856
         (530 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis ...    57   4e-06
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...    57   4e-06
ref|XP_010430968.1| PREDICTED: uncharacterized protein LOC104715...    56   9e-06

>emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268350|emb|CAB78643.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 1942

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 21/32 (65%), Positives = 26/32 (81%)
 Frame = -2

Query: 109 VHINLWGPSPVMSVQGYEYYASFVYAYNRYCW 14
           +H +LWGPSPVMSVQG+ YY  F+  Y+RYCW
Sbjct: 446 IHCDLWGPSPVMSVQGFRYYVIFIDNYSRYCW 477



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 21/32 (65%), Positives = 26/32 (81%)
 Frame = -2

Query: 109  VHINLWGPSPVMSVQGYEYYASFVYAYNRYCW 14
            +H +LWGPSPVMSVQG+ YY  F+  Y+RYCW
Sbjct: 1346 IHCDLWGPSPVMSVQGFRYYVIFIDNYSRYCW 1377


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 22/37 (59%), Positives = 29/37 (78%)
 Frame = -2

Query: 124 RPLQLVHINLWGPSPVMSVQGYEYYASFVYAYNRYCW 14
           RPL+ VH +LWGPSP+ SVQG+ YYA F+  Y+R+ W
Sbjct: 520 RPLERVHCDLWGPSPITSVQGFRYYAVFIDHYSRFSW 556


>ref|XP_010430968.1| PREDICTED: uncharacterized protein LOC104715244 [Camelina sativa]
          Length = 618

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 20/36 (55%), Positives = 29/36 (80%)
 Frame = -2

Query: 121 PLQLVHINLWGPSPVMSVQGYEYYASFVYAYNRYCW 14
           P+  +H +LWGPSPV+SVQG++YY  F+ A++RY W
Sbjct: 538 PIDRIHCDLWGPSPVVSVQGFKYYVVFINAFSRYSW 573


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