BLASTX nr result

ID: Aconitum23_contig00022775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00022775
         (399 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010266654.1| PREDICTED: pentatricopeptide repeat-containi...    65   2e-08
ref|XP_002532584.1| pentatricopeptide repeat-containing protein,...    60   5e-07

>ref|XP_010266654.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210
           [Nelumbo nucifera]
          Length = 868

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 46/94 (48%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
 Frame = -2

Query: 281 SPIFIKTRFILCSAHFSSLNSFLPPTSTPQIGQFTGYDP-KSISFSFKEWFKSRDAALLD 105
           S IF K R I+CS  FSSLN+  P T TPQ     G  P + ++ SFKEWFK     L+ 
Sbjct: 14  SEIFNK-RIIVCS--FSSLNTLFPLTPTPQ---GPGNLPTRDVALSFKEWFKFGQDPLIR 67

Query: 104 RIFEVLASTTDDLDSELKLSQLGFKLNQEFVLKV 3
           +IF++L+S  D L S L LS+LG +L + FVLKV
Sbjct: 68  QIFKILSSQDDALAS-LALSRLGLRLTEPFVLKV 100


>ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527693|gb|EEF29801.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 895

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 37/83 (44%), Positives = 49/83 (59%)
 Frame = -2

Query: 251 LCSAHFSSLNSFLPPTSTPQIGQFTGYDPKSISFSFKEWFKSRDAALLDRIFEVLASTTD 72
           LC  H+ S  S +P     QI     Y  K +  SFKEWFK+++   LDR+FE+L S  D
Sbjct: 47  LCYYHYYSTLSAIP---IQQINFHPNYTYKHVVQSFKEWFKTQNNGFLDRVFEIL-SNQD 102

Query: 71  DLDSELKLSQLGFKLNQEFVLKV 3
           ++D EL LSQLG +L +  VL V
Sbjct: 103 EVD-ELALSQLGLRLTESLVLDV 124


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