BLASTX nr result
ID: Aconitum23_contig00022238
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00022238
(1499 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282614.1| PREDICTED: RNA pseudouridine synthase 4, mit... 458 e-126
ref|XP_010271251.1| PREDICTED: RNA pseudouridine synthase 4, mit... 456 e-125
ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prun... 454 e-124
ref|XP_008236380.1| PREDICTED: RNA pseudouridine synthase 4, mit... 448 e-123
ref|XP_011001179.1| PREDICTED: RNA pseudouridine synthase 4, mit... 447 e-123
ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prun... 447 e-122
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu... 446 e-122
ref|XP_011001172.1| PREDICTED: RNA pseudouridine synthase 4, mit... 442 e-121
ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [... 437 e-119
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr... 436 e-119
ref|XP_010096290.1| RNA pseudourine synthase 4 [Morus notabilis]... 434 e-118
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [... 428 e-117
ref|XP_012075891.1| PREDICTED: RNA pseudouridine synthase 4, mit... 426 e-116
ref|XP_009341344.1| PREDICTED: RNA pseudouridine synthase 4, mit... 423 e-115
ref|XP_012450617.1| PREDICTED: RNA pseudouridine synthase 4, mit... 423 e-115
ref|XP_004305959.1| PREDICTED: RNA pseudouridine synthase 4, mit... 422 e-115
gb|KNA07729.1| hypothetical protein SOVF_168390 [Spinacia oleracea] 412 e-112
ref|XP_010943215.1| PREDICTED: RNA pseudouridine synthase 4, mit... 412 e-112
ref|XP_008812838.1| PREDICTED: RNA pseudouridine synthase 4, mit... 412 e-112
ref|XP_009805027.1| PREDICTED: RNA pseudouridine synthase 4, mit... 409 e-111
>ref|XP_002282614.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
[Vitis vinifera] gi|296090438|emb|CBI40257.3| unnamed
protein product [Vitis vinifera]
Length = 476
Score = 458 bits (1178), Expect = e-126
Identities = 236/371 (63%), Positives = 283/371 (76%), Gaps = 10/371 (2%)
Frame = -1
Query: 1085 KQEKWLTLPPFTSTINATEVARKLS-------RXXXXXXXXXTALKWVLRCCPQLSHSLV 927
K+ KW TLP FT ++A+ + + LS TALKWV+RCCPQL SLV
Sbjct: 52 KKGKWFTLPAFTPVVDASSLGKVLSGHRTDLNTGNTTAGASTTALKWVVRCCPQLPRSLV 111
Query: 926 QKLFRLRQVRXXXXXXXXXXXXXXKP-HRLKRVSAKDEMSLGDKIVLPLSVKENQEVEQL 750
QKLFRLRQVR HRLKRV+AKD M+LGD+I+LP++V+E
Sbjct: 112 QKLFRLRQVRRESYNMITSDIGVQNQEHRLKRVAAKDLMNLGDQILLPITVEEFPS---- 167
Query: 749 QKHGFRCSEDEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYK 570
+KH + C+++EI+++ +LEL+KDPAIIV+NKPPG+PVQGG GIK SLDELAA L+YD
Sbjct: 168 EKHEYHCNDEEINFVHNLELYKDPAIIVVNKPPGLPVQGGIGIKRSLDELAATYLRYDCS 227
Query: 569 DPPRLVHRLDRDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRILQRTYWALV 390
+PPRLVHRLDRDSSGIL++GRTQTSAT+LHSIFREKTFGAS+ D + KRILQR YWALV
Sbjct: 228 EPPRLVHRLDRDSSGILIMGRTQTSATILHSIFREKTFGASNNDIDTKKRILQRRYWALV 287
Query: 389 IGTPRRSSGLISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLE 210
IG+PRR GLISAPLGKVV+D+GKSE+ITIVD+ QTMS QHA+TEYRVI++S GYTWLE
Sbjct: 288 IGSPRRPRGLISAPLGKVVVDDGKSERITIVDNVQTMSSQHAITEYRVIKSSCHGYTWLE 347
Query: 209 LRPLTGRKHQLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSNPVES--EKLPEINILP 36
L PLTGRKHQLRVHCA+VLGTPIVGDYKYGWQAHRKW+ + SN ++ E L P
Sbjct: 348 LSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWKQLFQSNIEKNLDENLSNRKTHP 407
Query: 35 FGLDSQSGSIL 3
FGLD +SGSIL
Sbjct: 408 FGLDLESGSIL 418
>ref|XP_010271251.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
X1 [Nelumbo nucifera]
Length = 472
Score = 456 bits (1172), Expect = e-125
Identities = 237/366 (64%), Positives = 279/366 (76%), Gaps = 9/366 (2%)
Frame = -1
Query: 1076 KWLTLPPFTSTINATEVARKLSRXXXXXXXXXT-------ALKWVLRCCPQLSHSLVQKL 918
+WL LPP +S+I+A V + LS T ALKWVLRCCP L SLVQKL
Sbjct: 54 RWLILPPVSSSIDAVSVVKALSSRPSDLKGETTNTTTSTTALKWVLRCCPHLPRSLVQKL 113
Query: 917 FRLRQVRXXXXXXXXXXXXXXKP--HRLKRVSAKDEMSLGDKIVLPLSVKENQEVEQLQK 744
FRLRQVR HRLKRV+AK+ M+LGD+I LP++V+E + Q+
Sbjct: 114 FRLRQVRRESCDSMSSLDIGNHAQEHRLKRVTAKEVMNLGDRIFLPITVQELPS--ETQE 171
Query: 743 HGFRCSEDEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDP 564
H C+EDEISYI SLEL+KDPAII +NKP GMPVQGG GIK SLDELAA L+YDY +P
Sbjct: 172 H--YCNEDEISYICSLELYKDPAIIAVNKPHGMPVQGGIGIKKSLDELAATYLRYDYSEP 229
Query: 563 PRLVHRLDRDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRILQRTYWALVIG 384
PRLVHRLDRDSSGILV+GRTQTSAT+LHSIFREKTFGAS D N K ILQR YWALVIG
Sbjct: 230 PRLVHRLDRDSSGILVMGRTQTSATILHSIFREKTFGASIND--NDKMILQRRYWALVIG 287
Query: 383 TPRRSSGLISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELR 204
TP+R++GLISAPLGKVVLD+GKSE++T+ + +S QHAVT+Y+V+++S GYTWLEL
Sbjct: 288 TPKRANGLISAPLGKVVLDDGKSERMTVDTNGNAISSQHAVTKYQVMKSSAHGYTWLELC 347
Query: 203 PLTGRKHQLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSNPVESEKLPEINILPFGLD 24
PLTGRKHQLRVHCA+VLGTPIVGDYKYGWQAHRKW+P+ WSNP +++KLP PFGLD
Sbjct: 348 PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWKPLSWSNPQKNKKLPRSKESPFGLD 407
Query: 23 SQSGSI 6
S+ GSI
Sbjct: 408 SEGGSI 413
>ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
gi|462395210|gb|EMJ01009.1| hypothetical protein
PRUPE_ppa004969mg [Prunus persica]
Length = 483
Score = 454 bits (1167), Expect = e-124
Identities = 236/378 (62%), Positives = 283/378 (74%), Gaps = 20/378 (5%)
Frame = -1
Query: 1079 EKWLTLPPFTSTINATEVARKLSRXXXXXXXXXT-------------ALKWVLRCCPQLS 939
EKW TLPPFT+TIN + + ++LSR T ALKWV RCCP+L
Sbjct: 48 EKWFTLPPFTATINGSALGKELSRNRSYGRDVITKTATASTTSTTTTALKWVTRCCPELP 107
Query: 938 HSLVQKLFRLRQVRXXXXXXXXXXXXXXKPHR-LKRVSAKDEMSLGDKIVLPLSVKE--- 771
SLVQKLFRLRQVR R LKRV+AKD M++GD+I LPLSV+E
Sbjct: 108 RSLVQKLFRLRQVRRESCDMECSGEGVEALERPLKRVAAKDSMNVGDRIHLPLSVQEFPN 167
Query: 770 -NQEVEQLQKHGFRCSEDEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAA 594
QE+ +K + CSE+E+++I+SLEL+KDPAIIVINKPPGMPVQGG GIK SLDELAA
Sbjct: 168 DKQELPNDKKECY-CSEEEVTFIRSLELYKDPAIIVINKPPGMPVQGGIGIKRSLDELAA 226
Query: 593 ISLKYDYKDPPRLVHRLDRDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRIL 414
L YD+ +PPRLVHRLDRDSSGILV+GRTQTSATVLHSIFREKTFGAS+ + ++ KRIL
Sbjct: 227 ACLSYDFSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFGASNDEIDDAKRIL 286
Query: 413 QRTYWALVIGTPRRSSGLISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETS 234
QR YWALVIG+PR+ GLISAPLGKVV+DNGKS++ITIV+D+QT+ QHA+T+Y+VI +
Sbjct: 287 QRRYWALVIGSPRQRKGLISAPLGKVVVDNGKSDRITIVNDSQTLPSQHAITKYKVIGSP 346
Query: 233 HQGYTWLELRPLTGRKHQLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSNPV--ESEK 60
GYTWLEL PLTGRKHQLRVHCA+VL TPIVGDYKYGWQ HR W+P+ WSN E+
Sbjct: 347 CPGYTWLELTPLTGRKHQLRVHCAEVLRTPIVGDYKYGWQTHRNWKPLAWSNNECHSDEE 406
Query: 59 LPEINILPFGLDSQSGSI 6
P+ LPF L+ +SGS+
Sbjct: 407 FPKRKNLPFDLNMESGSV 424
>ref|XP_008236380.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Prunus mume]
Length = 483
Score = 448 bits (1152), Expect = e-123
Identities = 234/378 (61%), Positives = 280/378 (74%), Gaps = 20/378 (5%)
Frame = -1
Query: 1079 EKWLTLPPFTSTINATEVARKLSRXXXXXXXXXT-------------ALKWVLRCCPQLS 939
EKW TLPPFT+TIN + + ++LSR T ALKWV RCCP+L
Sbjct: 48 EKWFTLPPFTATINGSALGKELSRNRSYGRDVITKTATTSTTSTTTTALKWVTRCCPELP 107
Query: 938 HSLVQKLFRLRQVRXXXXXXXXXXXXXXKPHR-LKRVSAKDEMSLGDKIVLPLSVKE--- 771
SLVQKLFRLRQVR R LKRV+AKD M++GD+I LP+SV+E
Sbjct: 108 RSLVQKLFRLRQVRRESCDMECSGEGVEALERPLKRVAAKDSMNVGDRIHLPISVQEFPN 167
Query: 770 -NQEVEQLQKHGFRCSEDEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAA 594
QE+ +K CSE+E+++I+SLEL+KDPAIIVINKPPGMPVQGG GIK SLDELAA
Sbjct: 168 DKQELPNDKKE-CHCSEEEVTFIRSLELYKDPAIIVINKPPGMPVQGGIGIKRSLDELAA 226
Query: 593 ISLKYDYKDPPRLVHRLDRDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRIL 414
L YD+ + PRLVHRLDRDSSGILV+GRTQTSATVLHSIFREKTFGAS+ ++ KRIL
Sbjct: 227 ACLSYDFSESPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFGASNDVIDDAKRIL 286
Query: 413 QRTYWALVIGTPRRSSGLISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETS 234
QR YWALVIG+PR+ GLISAPLGKVV+DNGKS++ITIV+D+QT+ QHA+T+Y+VI +
Sbjct: 287 QRRYWALVIGSPRQRKGLISAPLGKVVVDNGKSDRITIVNDSQTLPSQHAITKYKVIGSP 346
Query: 233 HQGYTWLELRPLTGRKHQLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSNPV--ESEK 60
GYTWLEL PLTGRKHQLRVHCA+VL TPIVGDYKYGWQ HR W+P+ WSN E+
Sbjct: 347 CPGYTWLELTPLTGRKHQLRVHCAEVLQTPIVGDYKYGWQTHRNWKPLAWSNNECHSDEE 406
Query: 59 LPEINILPFGLDSQSGSI 6
P+ LPF L+ +SGS+
Sbjct: 407 FPKTKNLPFDLNMESGSV 424
>ref|XP_011001179.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
[Populus euphratica]
Length = 471
Score = 447 bits (1151), Expect = e-123
Identities = 231/364 (63%), Positives = 273/364 (75%), Gaps = 4/364 (1%)
Frame = -1
Query: 1085 KQEKWLTLPPFTSTINATEVARKLS-RXXXXXXXXXTALKWVLRCCPQLSHSLVQKLFRL 909
K+ KW TLPP+TSTIN + + + LS R TALKWVLRCCP+L +LVQKLFRL
Sbjct: 54 KRGKWFTLPPYTSTINGSVLGKALSTRIPAKSASETTALKWVLRCCPELPRNLVQKLFRL 113
Query: 908 RQVRXXXXXXXXXXXXXXKP-HRLKRVSAKDEMSLGDKIVLPLSVKENQEVEQLQKHGFR 732
RQVR HRLKRV+AKD M +GD+I LP+SVK +K
Sbjct: 114 RQVRRESSVMESCNLGDQGQEHRLKRVAAKDSMDVGDRIFLPISVK----ALPAEKQDCH 169
Query: 731 CSEDEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDPPRLV 552
CSE+E ++I+ LEL+KD AIIV+NKPPGMPVQGG GIK SLDEL+A DY +PPRLV
Sbjct: 170 CSEEETNFIRGLELYKDDAIIVVNKPPGMPVQGGIGIKRSLDELSASCFSSDYSEPPRLV 229
Query: 551 HRLDRDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRILQRTYWALVIGTPRR 372
HRLDRD SGILV+GRTQTSATVLH+IFREKT AS+ D + +RILQR YWALVIG+PRR
Sbjct: 230 HRLDRDCSGILVMGRTQTSATVLHAIFREKTLAASNDDVGDKRRILQRKYWALVIGSPRR 289
Query: 371 SSGLISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELRPLTG 192
GLISAPLGKVV+DNGKS++IT+V+++Q +S QHAVT+YRVIE+SH G+TWLEL PLTG
Sbjct: 290 QKGLISAPLGKVVVDNGKSDRITVVENSQNLSSQHAVTQYRVIESSH-GFTWLELSPLTG 348
Query: 191 RKHQLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSNPVE--SEKLPEINILPFGLDSQ 18
RKHQLRVHCA+VLGTPIVGDYKY WQAHR W+ +PWSN + +EK ILPF LD
Sbjct: 349 RKHQLRVHCAEVLGTPIVGDYKYAWQAHRNWKQLPWSNIEDNSNEKSRSEKILPFALDLD 408
Query: 17 SGSI 6
SG I
Sbjct: 409 SGGI 412
>ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
gi|462395209|gb|EMJ01008.1| hypothetical protein
PRUPE_ppa004969mg [Prunus persica]
Length = 481
Score = 447 bits (1149), Expect = e-122
Identities = 235/378 (62%), Positives = 281/378 (74%), Gaps = 20/378 (5%)
Frame = -1
Query: 1079 EKWLTLPPFTSTINATEVARKLSRXXXXXXXXXT-------------ALKWVLRCCPQLS 939
EKW TLPPFT+TIN + + ++LSR T ALKWV RCCP+L
Sbjct: 48 EKWFTLPPFTATINGSALGKELSRNRSYGRDVITKTATASTTSTTTTALKWVTRCCPELP 107
Query: 938 HSLVQKLFRLRQVRXXXXXXXXXXXXXXKPHR-LKRVSAKDEMSLGDKIVLPLSVKE--- 771
SLVQKLFRLRQVR R LKRV+AKD M++GD+I LPLSV+E
Sbjct: 108 RSLVQKLFRLRQVRRESCDMECSGEGVEALERPLKRVAAKDSMNVGDRIHLPLSVQEFPN 167
Query: 770 -NQEVEQLQKHGFRCSEDEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAA 594
QE+ +K + CSE+E+++I+SLEL+KDPAIIVINKPPGMPVQGG GIK SLDELAA
Sbjct: 168 DKQELPNDKKECY-CSEEEVTFIRSLELYKDPAIIVINKPPGMPVQGGIGIKRSLDELAA 226
Query: 593 ISLKYDYKDPPRLVHRLDRDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRIL 414
L YD+ +PPRLVHRLDRDSSGILV+GRTQTSATVLHSIFREKTFGAS+ + ++ KRIL
Sbjct: 227 ACLSYDFSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFGASNDEIDDAKRIL 286
Query: 413 QRTYWALVIGTPRRSSGLISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETS 234
QR YWALVIG+PR+ GLISAPLGKVV+DNGKS++ITIV+D+QT+ QHA+T+Y+VI
Sbjct: 287 QRRYWALVIGSPRQRKGLISAPLGKVVVDNGKSDRITIVNDSQTLPSQHAITKYKVI--G 344
Query: 233 HQGYTWLELRPLTGRKHQLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSNPV--ESEK 60
YTWLEL PLTGRKHQLRVHCA+VL TPIVGDYKYGWQ HR W+P+ WSN E+
Sbjct: 345 SPCYTWLELTPLTGRKHQLRVHCAEVLRTPIVGDYKYGWQTHRNWKPLAWSNNECHSDEE 404
Query: 59 LPEINILPFGLDSQSGSI 6
P+ LPF L+ +SGS+
Sbjct: 405 FPKRKNLPFDLNMESGSV 422
>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
gi|550331407|gb|EEE87831.2| hypothetical protein
POPTR_0009s09860g [Populus trichocarpa]
Length = 471
Score = 446 bits (1148), Expect = e-122
Identities = 232/364 (63%), Positives = 274/364 (75%), Gaps = 4/364 (1%)
Frame = -1
Query: 1085 KQEKWLTLPPFTSTINATEVARKLS-RXXXXXXXXXTALKWVLRCCPQLSHSLVQKLFRL 909
K+ KW TLPP+TSTIN + + LS R TALKWVLRCCP+L +LVQKLFRL
Sbjct: 54 KRGKWFTLPPYTSTINGSVLGIALSARIPAKSASETTALKWVLRCCPELPRNLVQKLFRL 113
Query: 908 RQVRXXXXXXXXXXXXXXKP-HRLKRVSAKDEMSLGDKIVLPLSVKENQEVEQLQKHGFR 732
RQVR HRLKRV+AKD M +GD+I LP+SVK V +K
Sbjct: 114 RQVRRESPVMESCNLGDQGQEHRLKRVAAKDSMDVGDRIFLPISVK----VLPAEKQDCH 169
Query: 731 CSEDEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDPPRLV 552
C+E+EI++I+ LEL+KD AIIV+NKPPGMPVQGG GIK SLDEL+A DY +PPRLV
Sbjct: 170 CNEEEINFIRGLELYKDAAIIVVNKPPGMPVQGGIGIKRSLDELSASCFSSDYSEPPRLV 229
Query: 551 HRLDRDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRILQRTYWALVIGTPRR 372
HRLDRD SGILV+GRTQTSATVLH+IFREKT AS+ D N +RILQR YWALVIG+PRR
Sbjct: 230 HRLDRDCSGILVMGRTQTSATVLHAIFREKTLAASNDDVGNKRRILQRKYWALVIGSPRR 289
Query: 371 SSGLISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELRPLTG 192
GLISAPLGKVV+DNGKS++IT+V+++Q +S QHAVT+YRVIE+SH G+TWLEL PLTG
Sbjct: 290 PKGLISAPLGKVVVDNGKSDRITVVENSQNLSSQHAVTQYRVIESSH-GFTWLELSPLTG 348
Query: 191 RKHQLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSNPVE--SEKLPEINILPFGLDSQ 18
RKHQLRVHCA+VLGTPIVGDYKY WQAHR W+ + WSN + ++K ILPF LD
Sbjct: 349 RKHQLRVHCAEVLGTPIVGDYKYAWQAHRNWKQLQWSNIEDNSNDKSLSEKILPFALDLD 408
Query: 17 SGSI 6
SGSI
Sbjct: 409 SGSI 412
>ref|XP_011001172.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
[Populus euphratica]
Length = 475
Score = 442 bits (1138), Expect = e-121
Identities = 232/368 (63%), Positives = 273/368 (74%), Gaps = 8/368 (2%)
Frame = -1
Query: 1085 KQEKWLTLPPFTSTINATEVARKLS-RXXXXXXXXXTALKWVLRCCPQLSHSLVQKLFRL 909
K+ KW TLPP+TSTIN + + + LS R TALKWVLRCCP+L +LVQKLFRL
Sbjct: 54 KRGKWFTLPPYTSTINGSVLGKALSTRIPAKSASETTALKWVLRCCPELPRNLVQKLFRL 113
Query: 908 RQVRXXXXXXXXXXXXXXKP-HRLKRVSAKDEMSLGDKIVLPLSVKENQEVEQLQKHGFR 732
RQVR HRLKRV+AKD M +GD+I LP+SVK +K
Sbjct: 114 RQVRRESSVMESCNLGDQGQEHRLKRVAAKDSMDVGDRIFLPISVK----ALPAEKQDCH 169
Query: 731 CSEDEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDPPRLV 552
CSE+E ++I+ LEL+KD AIIV+NKPPGMPVQGG GIK SLDEL+A DY +PPRLV
Sbjct: 170 CSEEETNFIRGLELYKDDAIIVVNKPPGMPVQGGIGIKRSLDELSASCFSSDYSEPPRLV 229
Query: 551 HRLDRDSSGILVLGRTQTSATVLHSIFREKTFGA----SSGDTENTKRILQRTYWALVIG 384
HRLDRD SGILV+GRTQTSATVLH+IFREKT A SS D + +RILQR YWALVIG
Sbjct: 230 HRLDRDCSGILVMGRTQTSATVLHAIFREKTLAASNDVSSTDVGDKRRILQRKYWALVIG 289
Query: 383 TPRRSSGLISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELR 204
+PRR GLISAPLGKVV+DNGKS++IT+V+++Q +S QHAVT+YRVIE+SH G+TWLEL
Sbjct: 290 SPRRQKGLISAPLGKVVVDNGKSDRITVVENSQNLSSQHAVTQYRVIESSH-GFTWLELS 348
Query: 203 PLTGRKHQLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSNPVE--SEKLPEINILPFG 30
PLTGRKHQLRVHCA+VLGTPIVGDYKY WQAHR W+ +PWSN + +EK ILPF
Sbjct: 349 PLTGRKHQLRVHCAEVLGTPIVGDYKYAWQAHRNWKQLPWSNIEDNSNEKSRSEKILPFA 408
Query: 29 LDSQSGSI 6
LD SG I
Sbjct: 409 LDLDSGGI 416
>ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
gi|508706469|gb|EOX98365.1| Ribosomal pseudouridine
synthase, putative [Theobroma cacao]
Length = 477
Score = 437 bits (1124), Expect = e-119
Identities = 223/364 (61%), Positives = 278/364 (76%), Gaps = 4/364 (1%)
Frame = -1
Query: 1085 KQEKWLTLPPFTSTINATEVARKLS-RXXXXXXXXXTALKWVLRCCPQLSHSLVQKLFRL 909
K+ KW TLPPFT T+NA+ + KLS + TA+KWV+RCCP+L SLVQKLFRL
Sbjct: 59 KKNKWFTLPPFTKTVNASVLGAKLSGKPHSKAANETTAVKWVMRCCPELPRSLVQKLFRL 118
Query: 908 RQVRXXXXXXXXXXXXXXKPH-RLKRVSAKDEMSLGDKIVLPLSVKENQEVEQLQKHGFR 732
RQVR +LKRV AKD +++GD+I LP SV+E +E +K
Sbjct: 119 RQVRRESHVLEVAGDGCQVQTVQLKRVGAKDALNIGDRIFLPFSVREFRE----EKQESG 174
Query: 731 CSEDEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDPPRLV 552
C+E+E+++I+ LEL+KDPAIIV+NKPPGMPVQGG GIK SLD+LAA L +DY +PPRLV
Sbjct: 175 CTEEELNFIRGLELYKDPAIIVLNKPPGMPVQGGIGIKWSLDKLAAACLCFDYSEPPRLV 234
Query: 551 HRLDRDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRILQRTYWALVIGTPRR 372
HRLDRDSSGILV+GRTQ SAT+LHS+FRE+T AS D +N KRILQ+ YWALVIG+PRR
Sbjct: 235 HRLDRDSSGILVMGRTQMSATILHSVFREETNDASKDDVDNEKRILQKRYWALVIGSPRR 294
Query: 371 SSGLISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELRPLTG 192
G+I APL KVV+D+GKS++IT+ D++Q +S Q A TEY+VI+T+ GYTWLEL PLTG
Sbjct: 295 PKGMIVAPLRKVVVDDGKSDRITVFDNSQIVSSQRAKTEYQVIKTTSHGYTWLELSPLTG 354
Query: 191 RKHQLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSNPVES--EKLPEINILPFGLDSQ 18
RKHQLRVHCA+VLGTPIVGDYKYGWQAHR+W+ +P S+ +S +K PE N+LPFGL+
Sbjct: 355 RKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWQHLPESDLKKSSNDKCPEENMLPFGLNMD 414
Query: 17 SGSI 6
SGSI
Sbjct: 415 SGSI 418
>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
gi|557524859|gb|ESR36165.1| hypothetical protein
CICLE_v10028283mg [Citrus clementina]
Length = 494
Score = 436 bits (1121), Expect = e-119
Identities = 225/364 (61%), Positives = 272/364 (74%), Gaps = 3/364 (0%)
Frame = -1
Query: 1085 KQEKWLTLPPFTSTINATEVARKLSRXXXXXXXXXTALKWVLRCCPQLSHSLVQKLFRLR 906
++ KW TLPPFTSTI+ + + R+L+ TALKWVL+CCP L + VQKLFRL
Sbjct: 77 RRGKWFTLPPFTSTIDGSALGRQLACPSKSPISETTALKWVLQCCPGLPRNFVQKLFRLS 136
Query: 905 QVRXXXXXXXXXXXXXXKPH-RLKRVSAKDEMSLGDKIVLPLSVKENQEVEQLQKHGFRC 729
QVR + +LKRV+AKD + LGD+I LP+S++E+ +K C
Sbjct: 137 QVRRESPSLDSSANEGHEQEIKLKRVAAKDSLKLGDRIFLPISIQESPS----RKEKCPC 192
Query: 728 SEDEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDPPRLVH 549
+E+E+ +IQSLEL+KD AIIVINKP GMPVQGG GI+ S+DELAA L YDY +PPRLVH
Sbjct: 193 TEEEVGFIQSLELYKDSAIIVINKPHGMPVQGGIGIRRSIDELAATCLTYDYSEPPRLVH 252
Query: 548 RLDRDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRILQRTYWALVIGTPRRS 369
RLDRDSSGILV+GRTQTSATVLHSIFREKTF AS D +N KRILQR YWALV+GTPR S
Sbjct: 253 RLDRDSSGILVMGRTQTSATVLHSIFREKTFSASKEDNDNEKRILQRWYWALVVGTPRCS 312
Query: 368 SGLISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELRPLTGR 189
G+ISAPL KVV+DNGKS++IT+V++ Q MS QHAVT Y+VI+ S GYTWL+L PLTGR
Sbjct: 313 KGVISAPLRKVVVDNGKSDRITVVNNDQIMSAQHAVTRYQVIKPSCHGYTWLKLSPLTGR 372
Query: 188 KHQLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWS--NPVESEKLPEINILPFGLDSQS 15
KHQLRVHCA+VLGTPIVGDYKYGWQ HRKW+ S N +++ P+ L FGLD +S
Sbjct: 373 KHQLRVHCAEVLGTPIVGDYKYGWQTHRKWKQFHPSDLNKDSNDETPKEKTLHFGLDLES 432
Query: 14 GSIL 3
GSIL
Sbjct: 433 GSIL 436
>ref|XP_010096290.1| RNA pseudourine synthase 4 [Morus notabilis]
gi|587874547|gb|EXB63685.1| RNA pseudourine synthase 4
[Morus notabilis]
Length = 470
Score = 434 bits (1115), Expect = e-118
Identities = 220/368 (59%), Positives = 270/368 (73%), Gaps = 11/368 (2%)
Frame = -1
Query: 1076 KWLTLPPFTSTINATEVARKLSRXXXXXXXXXTA--------LKWVLRCCPQLSHSLVQK 921
KW TLPP T+T++ + + ++ A LKWV+RCCP+L SLVQK
Sbjct: 48 KWFTLPPHTATVDGAVLGKAIAGAKDDDVKVLQASKSAATTALKWVVRCCPELPRSLVQK 107
Query: 920 LFRLRQVRXXXXXXXXXXXXXXKPH-RLKRVSAKDEMSLGDKIVLPLSVKENQEVEQLQK 744
LFRLRQVR RL+RVSAKD ++LGDKI LP+SVKE ++K
Sbjct: 108 LFRLRQVRRESFNVEDCNAGDQLGKPRLRRVSAKDSLNLGDKIFLPISVKELP----VEK 163
Query: 743 HGFRCSEDEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDP 564
C+E+E+ +I+SLEL+KDPAI+V+NKPPG+PVQGG GIK SLD+LA L YDY +P
Sbjct: 164 KECFCNEEEVKFIRSLELYKDPAIVVVNKPPGLPVQGGIGIKTSLDQLAVTCLSYDYTEP 223
Query: 563 PRLVHRLDRDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRILQRTYWALVIG 384
PRLVHRLDRD SGILV+GRTQTSATVLHSIFREKTFGAS+ +T K +LQR YWA VIG
Sbjct: 224 PRLVHRLDRDCSGILVMGRTQTSATVLHSIFREKTFGASNDETVKGKIVLQRRYWAFVIG 283
Query: 383 TPRRSSGLISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELR 204
+PR +GLISAPL KVVLDNGKS++IT+V+ + T+S QHA+T+Y+VI +S GYTWLEL
Sbjct: 284 SPRHPNGLISAPLRKVVLDNGKSDRITVVNGSHTLSSQHAITKYKVIGSSSHGYTWLELS 343
Query: 203 PLTGRKHQLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSNPVES--EKLPEINILPFG 30
PLTGRKHQLRVHCA+VLGTP+VGDYKYGWQAHR W+P+ W +P E LP+ LPFG
Sbjct: 344 PLTGRKHQLRVHCAEVLGTPMVGDYKYGWQAHRDWKPLHWPDPDNKCIEVLPKRKNLPFG 403
Query: 29 LDSQSGSI 6
L+ +GSI
Sbjct: 404 LNMDNGSI 411
>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 536
Score = 428 bits (1100), Expect = e-117
Identities = 219/360 (60%), Positives = 270/360 (75%), Gaps = 3/360 (0%)
Frame = -1
Query: 1076 KWLTLPPFTSTINATEVARKLSRXXXXXXXXXT-ALKWVLRCCPQLSHSLVQKLFRLRQV 900
K+ TLPP+TSTI+ + + + LS T ALKWVLRCCP+L +LVQKLFRLRQV
Sbjct: 127 KFFTLPPYTSTISGSALGKALSATATAKASTETTALKWVLRCCPELPRNLVQKLFRLRQV 186
Query: 899 RXXXXXXXXXXXXXXKPHRLKRVSAKDEMSLGDKIVLPLSVKENQEVEQLQKHGFRCSED 720
+ H+ KRV+AKD M++GD+I LP+SV + +K C E
Sbjct: 187 KRELLNVGDGEME----HKTKRVAAKDLMNVGDRIFLPISV----QALPFEKQKCHCGEK 238
Query: 719 EISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDPPRLVHRLD 540
E ++I+ LEL+KD AIIV+NKPPGMPVQGG GIK+S DELAA L YDY +PPRLVHRLD
Sbjct: 239 EANFIRGLELYKDEAIIVVNKPPGMPVQGGIGIKSSFDELAASCLSYDYSEPPRLVHRLD 298
Query: 539 RDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRILQRTYWALVIGTPRRSSGL 360
RDSSGILV+GRTQTS VLHS+FREKTF AS+ D +RILQR YWALVIG+PRR G+
Sbjct: 299 RDSSGILVMGRTQTSTMVLHSVFREKTFAASNHDIGERRRILQRKYWALVIGSPRRQKGI 358
Query: 359 ISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELRPLTGRKHQ 180
ISAPLGKVV+D+GKS++IT+V++A++ S QHAVT+YRV+E+SH GY WLEL P+TGRKHQ
Sbjct: 359 ISAPLGKVVVDDGKSDRITVVENAESTSFQHAVTQYRVMESSH-GYAWLELSPITGRKHQ 417
Query: 179 LRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSN--PVESEKLPEINILPFGLDSQSGSI 6
LRVHCA+VLGTPIVGDYKYGWQ HRKW+ +P+ N + +E ILPFG+D +SGSI
Sbjct: 418 LRVHCAEVLGTPIVGDYKYGWQVHRKWKQLPFPNLEKISNENALCKKILPFGIDLESGSI 477
>ref|XP_012075891.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Jatropha
curcas] gi|802540331|ref|XP_012075896.1| PREDICTED: RNA
pseudouridine synthase 4, mitochondrial [Jatropha curcas]
gi|802540333|ref|XP_012075899.1| PREDICTED: RNA
pseudouridine synthase 4, mitochondrial [Jatropha curcas]
gi|802540335|ref|XP_012075905.1| PREDICTED: RNA
pseudouridine synthase 4, mitochondrial [Jatropha curcas]
gi|643740231|gb|KDP45903.1| hypothetical protein
JCGZ_15463 [Jatropha curcas]
Length = 470
Score = 426 bits (1094), Expect = e-116
Identities = 219/363 (60%), Positives = 273/363 (75%), Gaps = 3/363 (0%)
Frame = -1
Query: 1085 KQEKWLTLPPFTSTINATEVARKLS-RXXXXXXXXXTALKWVLRCCPQLSHSLVQKLFRL 909
K+ KW TLPP+TSTI+ + + + LS TALKWVLRCCP+L SLVQKLFRL
Sbjct: 55 KKGKWFTLPPYTSTISGSALGKALSVSISEKLANETTALKWVLRCCPELPRSLVQKLFRL 114
Query: 908 RQVRXXXXXXXXXXXXXXKPHRLKRVSAKDEMSLGDKIVLPLSVKENQEVEQLQKHGFRC 729
RQVR ++KRV+AKD MS+GD+I LP++V+ +Q +
Sbjct: 115 RQVRRESSNLRDQAEE----QKVKRVAAKDLMSIGDRIFLPITVQALPSEKQQNVY---- 166
Query: 728 SEDEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDPPRLVH 549
+++ +++I+SLEL+KD IIV+NKPPG+PVQGG GIK SLDELAA L YDY +PPRLVH
Sbjct: 167 NQEAVNFIRSLELYKDDIIIVVNKPPGIPVQGGIGIKRSLDELAASCLSYDYSEPPRLVH 226
Query: 548 RLDRDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRILQRTYWALVIGTPRRS 369
RLDRDSSGILV+GRTQTS TVLHS+FREKTF AS+ D + +RILQR YWALVIG+PR
Sbjct: 227 RLDRDSSGILVMGRTQTSTTVLHSVFREKTFAASNDDIGDRRRILQRKYWALVIGSPRCQ 286
Query: 368 SGLISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELRPLTGR 189
GLISAPLGKV++DNGKS++IT++++ S QHAVT YRV+E S Q YTWLEL PLTGR
Sbjct: 287 KGLISAPLGKVLVDNGKSDRITVIENVHNTSSQHAVTHYRVLE-SFQDYTWLELSPLTGR 345
Query: 188 KHQLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSNPVES--EKLPEINILPFGLDSQS 15
KHQLRVHCA+VLGTPIVGDYKYGWQAHRKW+ + WS+ ++ +K+P +LP G+D +S
Sbjct: 346 KHQLRVHCAEVLGTPIVGDYKYGWQAHRKWKHLHWSDLEKTLHDKVPCEKMLPLGIDFES 405
Query: 14 GSI 6
GSI
Sbjct: 406 GSI 408
>ref|XP_009341344.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like [Pyrus x
bretschneideri]
Length = 486
Score = 423 bits (1088), Expect = e-115
Identities = 224/377 (59%), Positives = 267/377 (70%), Gaps = 19/377 (5%)
Frame = -1
Query: 1079 EKWLTLPPFTSTINATEVARKLSRXXXXXXXXXT--------------ALKWVLRCCPQL 942
+KW TLP FT+T+N V ++LSR ALKWV RCCP+L
Sbjct: 54 QKWFTLPSFTATVNGAAVGKELSRNRSNGGRGTITNTASAAADTTTTTALKWVTRCCPEL 113
Query: 941 SHSLVQKLFRLRQVRXXXXXXXXXXXXXXKPHRLKRVSAKDEMSLGDKIVLPLSVKE--- 771
SLVQKLFRLRQVR LKRV+AKD M++GD+I LP SV+E
Sbjct: 114 PRSLVQKLFRLRQVRRESCSGQAVEAHERP---LKRVAAKDSMNIGDRIHLPFSVQEFPA 170
Query: 770 NQEVEQLQKHGFRCSEDEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAAI 591
++ K CSE+EI++I+SLEL+KDPAIIVINKPPGMPVQGG GIK SLD+LA
Sbjct: 171 DKHKSSNYKQECHCSEEEINFIRSLELYKDPAIIVINKPPGMPVQGGIGIKRSLDKLATA 230
Query: 590 SLKYDYKDPPRLVHRLDRDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRILQ 411
L YD +PPRLVHRLDRDSSG+LV+GRTQT A VLHSIFREKT GAS+ T++ KRILQ
Sbjct: 231 CLSYDLSEPPRLVHRLDRDSSGLLVMGRTQTIAAVLHSIFREKTVGASNDVTDDAKRILQ 290
Query: 410 RTYWALVIGTPRRSSGLISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETSH 231
R YWALVIG+PR+ GLISAPL KVV+DNGKSE+IT +D+QT+S QHA+T+Y+VI +S
Sbjct: 291 RRYWALVIGSPRQRKGLISAPLVKVVVDNGKSERITAANDSQTLSSQHAITKYKVIGSSC 350
Query: 230 QGYTWLELRPLTGRKHQLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSNPVE--SEKL 57
G+TWLEL PLTGRKHQLRVHCA+VL TPIVGDYKYGWQ HR W+P+ SN +E+L
Sbjct: 351 PGFTWLELTPLTGRKHQLRVHCAEVLRTPIVGDYKYGWQTHRNWKPLSSSNTESHWNEEL 410
Query: 56 PEINILPFGLDSQSGSI 6
LPF L+ SGSI
Sbjct: 411 RPRRNLPFDLNMDSGSI 427
>ref|XP_012450617.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Gossypium
raimondii] gi|763744841|gb|KJB12280.1| hypothetical
protein B456_002G009500 [Gossypium raimondii]
Length = 479
Score = 423 bits (1087), Expect = e-115
Identities = 219/372 (58%), Positives = 274/372 (73%), Gaps = 12/372 (3%)
Frame = -1
Query: 1085 KQEKWLTLPPFTSTINATEVARKLSRXXXXXXXXXT--------ALKWVLRCCPQLSHSL 930
K+ KW TLPPF T+NA+E+ KL+R ALKWVL+CCP+L +L
Sbjct: 53 KESKWFTLPPFAKTVNASELGAKLARKNHLKSATSAETSAYETTALKWVLKCCPELPRNL 112
Query: 929 VQKLFRLRQVRXXXXXXXXXXXXXXKPH-RLKRVSAKDEMSLGDKIVLPLSVKENQEVEQ 753
VQKLFRLRQVR +LKRV AKD +++GDKI LP+SV+E E
Sbjct: 113 VQKLFRLRQVRRESIAMEVTDDGCQVQKIQLKRVGAKDSLNIGDKIFLPISVREVPE--- 169
Query: 752 LQKHGFRCSEDEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDY 573
+KH C+++E ++I+SLEL+KD AIIV+NKPPGMPVQGG GIK SLDELAA L+YDY
Sbjct: 170 -EKHEHDCTDEESNFIRSLELYKDTAIIVLNKPPGMPVQGGIGIKWSLDELAAAWLRYDY 228
Query: 572 KDPPRLVHRLDRDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRILQRTYWAL 393
+ PRLVHRLDRD SGILV+GRTQ SA +LHS+FRE+T GAS D++N KR+LQ+ YWAL
Sbjct: 229 SESPRLVHRLDRDCSGILVMGRTQMSAAILHSVFREETLGASKHDSDNEKRVLQKRYWAL 288
Query: 392 VIGTPRRSSGLISAPLGKVVLDNGKSEQITIVDDAQT-MSCQHAVTEYRVIETSHQGYTW 216
VIG+PRR G ISAPL KVV+D+GKS++IT+ + T +S Q A+TEYRVI+TS G+TW
Sbjct: 289 VIGSPRRPKGTISAPLRKVVVDDGKSDRITVFEHNNTILSSQRAITEYRVIKTSTHGFTW 348
Query: 215 LELRPLTGRKHQLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSN--PVESEKLPEINI 42
LEL PLTGRKHQLRVHCA+VLGTPIVGDYKYGWQAHR+++ + S+ +EK+ + N+
Sbjct: 349 LELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRFQNLAESDLRKNSNEKVAKENM 408
Query: 41 LPFGLDSQSGSI 6
LPFGL+ SGSI
Sbjct: 409 LPFGLNMDSGSI 420
>ref|XP_004305959.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Fragaria
vesca subsp. vesca]
Length = 476
Score = 422 bits (1085), Expect = e-115
Identities = 219/366 (59%), Positives = 262/366 (71%), Gaps = 9/366 (2%)
Frame = -1
Query: 1076 KWLTLPPFTSTINATEVARKLSRXXXXXXXXXT-------ALKWVLRCCPQLSHSLVQKL 918
KW TLPPFT T+N + R+LSR ALKWV RCCP++ +LVQKL
Sbjct: 51 KWFTLPPFTDTVNGAALGRELSRSVGRDVYAKPSAAAATTALKWVTRCCPEIPRNLVQKL 110
Query: 917 FRLRQVRXXXXXXXXXXXXXXKPHRLKRVSAKDEMSLGDKIVLPLSVKENQEVEQLQKHG 738
FRLRQVR LKRV KD M+LGD+I LP+SVKE + +Q + H
Sbjct: 111 FRLRQVRREASDMDQSVQP------LKRVGTKDSMNLGDRICLPISVKEFPDHKQKEGH- 163
Query: 737 FRCSEDEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDPPR 558
CSE+E +I+SL L+KDPAIIVINKPPG+PVQGG GIK SLDELAA L YD PPR
Sbjct: 164 --CSEEEAEFIRSLVLYKDPAIIVINKPPGLPVQGGIGIKRSLDELAATCLSYDLSQPPR 221
Query: 557 LVHRLDRDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRILQRTYWALVIGTP 378
LVHRLDRD SGILV+GRTQTSATVLHS+FREKTFGAS ++ K ILQR Y ALVIG+P
Sbjct: 222 LVHRLDRDCSGILVMGRTQTSATVLHSVFREKTFGASDDVIKHAKSILQRRYLALVIGSP 281
Query: 377 RRSSGLISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELRPL 198
R+ GLIS PLGKVV+DNGKS++ITI++ AQ + QHA+T+Y+VI +S G+TWLEL PL
Sbjct: 282 RQQEGLISVPLGKVVVDNGKSDRITILNKAQCLPSQHAITKYKVIGSSCPGFTWLELIPL 341
Query: 197 TGRKHQLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSNPV--ESEKLPEINILPFGLD 24
TGRKHQLRVHCA+VLGTPIVGDYKYGW+ H+ W+P+ WS +E+ + LPF L+
Sbjct: 342 TGRKHQLRVHCAEVLGTPIVGDYKYGWRTHKDWKPVAWSKTECHSNEERSKRKNLPFDLN 401
Query: 23 SQSGSI 6
SGSI
Sbjct: 402 MDSGSI 407
>gb|KNA07729.1| hypothetical protein SOVF_168390 [Spinacia oleracea]
Length = 478
Score = 412 bits (1059), Expect = e-112
Identities = 215/363 (59%), Positives = 260/363 (71%), Gaps = 6/363 (1%)
Frame = -1
Query: 1076 KWLTLPPFTSTINATEVARKLSRXXXXXXXXXT-----ALKWVLRCCPQLSHSLVQKLFR 912
KW+TLPPFTST+N + R+LSR ALKWV+RCCP L SLVQKLFR
Sbjct: 58 KWVTLPPFTSTVNTDSLGRRLSRRDIEEANESIKTTTSALKWVIRCCPHLPQSLVQKLFR 117
Query: 911 LRQVRXXXXXXXXXXXXXXKPHRLKRVSAKDEMSLGDKIVLPLSVKENQEVEQLQKHGFR 732
LRQVR + RLKRV AKD M+ G++I LP+SV+ + V++ K +
Sbjct: 118 LRQVRRECLEGDVYSSGDAQEFRLKRVGAKDSMNKGERIFLPISVQGSSPVKKQPK--YE 175
Query: 731 CSEDEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDPPRLV 552
CSE E+++I+SLEL+KD AII INKPP +PVQGG GIK SLDELAA SL+YD +PPRLV
Sbjct: 176 CSEAEMNFIRSLELYKDSAIIAINKPPKLPVQGGLGIKKSLDELAATSLRYDVMEPPRLV 235
Query: 551 HRLDRDSSGILVLGRTQTSATVLHSIFREKTFGASSG-DTENTKRILQRTYWALVIGTPR 375
HRLDRDSSGILV+GRTQTS +LHS+FREKT G + + + KRILQ+ Y ALV G P+
Sbjct: 236 HRLDRDSSGILVMGRTQTSTAILHSVFREKTIGITKDKEVDWGKRILQKRYLALVFGVPK 295
Query: 374 RSSGLISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELRPLT 195
GLIS PL KV++D+GKSE+IT+ D+A S Q AVTEYRVIE+S GYTWLEL P+T
Sbjct: 296 HVKGLISVPLAKVLVDDGKSERITVADNAS--SSQQAVTEYRVIESSSYGYTWLELSPVT 353
Query: 194 GRKHQLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSNPVESEKLPEINILPFGLDSQS 15
GRKHQLRVHCA+VLGTPIVGDYKYGWQAHR+W P+P + EK E P GL+ +
Sbjct: 354 GRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWEPLP---SIPDEKFVEAKADPLGLNLEC 410
Query: 14 GSI 6
GSI
Sbjct: 411 GSI 413
>ref|XP_010943215.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
[Elaeis guineensis]
Length = 478
Score = 412 bits (1059), Expect = e-112
Identities = 220/360 (61%), Positives = 261/360 (72%), Gaps = 3/360 (0%)
Frame = -1
Query: 1076 KWLTLPPFTSTINATEVARKLS--RXXXXXXXXXTALKWVLRCCPQLSHSLVQKLFRLRQ 903
+WLTLPPF ++A+ V + ++ + TALKWV RCCP L SLVQKLFRLRQ
Sbjct: 61 RWLTLPPFAPPVDASYVRKAIASGQRPAGEEEPTTALKWVRRCCPHLPMSLVQKLFRLRQ 120
Query: 902 VRXXXXXXXXXXXXXXKPHRLKRVSAKDEMSLGDKIVLPLSVKENQEVEQLQKHGFRCSE 723
VR +L+RVSAKD M GD I+LP++V+ +K+ + SE
Sbjct: 121 VRRDLTKNGSHMDGYYGQQQLRRVSAKDVMMPGDVILLPVTVQN----VATKKYDYSESE 176
Query: 722 DEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDPPRLVHRL 543
+EIS+I+SLEL+KD AII +NKPPGMPVQGG GIK S+D LAA S KYDY + PRLVHRL
Sbjct: 177 EEISFIRSLELYKDSAIIAVNKPPGMPVQGGVGIKYSMDALAAKSFKYDYPESPRLVHRL 236
Query: 542 DRDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRILQRTYWALVIGTPRRSSG 363
DRDSSG+LVLGRTQTSA VLHSIFREKT GA S D + T R LQR Y ALVIGTP+R G
Sbjct: 237 DRDSSGVLVLGRTQTSALVLHSIFREKTSGALSDDIKTTCRALQRKYLALVIGTPKRWKG 296
Query: 362 LISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELRPLTGRKH 183
LISAPL K+VL++GKSE+ITIV D +T S HA+TEY+VI +S G+TWLEL PLTGRKH
Sbjct: 297 LISAPLTKIVLEDGKSERITIVKDTKTASSHHALTEYQVIRSSAHGFTWLELCPLTGRKH 356
Query: 182 QLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSNPV-ESEKLPEINILPFGLDSQSGSI 6
QLRVH A+ LGTPIVGDYKYGW AHRKW P+PW + E EKLP+ N PFGL+ GSI
Sbjct: 357 QLRVHLAEALGTPIVGDYKYGWYAHRKWEPMPWPESMSEDEKLPK-NKPPFGLELDGGSI 415
>ref|XP_008812838.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Phoenix
dactylifera]
Length = 476
Score = 412 bits (1059), Expect = e-112
Identities = 217/360 (60%), Positives = 257/360 (71%), Gaps = 3/360 (0%)
Frame = -1
Query: 1076 KWLTLPPFTSTINATEVARKLSRXXXXXXXXXT--ALKWVLRCCPQLSHSLVQKLFRLRQ 903
+WLTLPPF ++A+ V + ++R ALKWV RCC L SLVQKLFRLRQ
Sbjct: 61 RWLTLPPFAPPVDASSVGKAIARGRRPAGDGEPTTALKWVRRCCSHLPMSLVQKLFRLRQ 120
Query: 902 VRXXXXXXXXXXXXXXKPHRLKRVSAKDEMSLGDKIVLPLSVKENQEVEQLQKHGFRCSE 723
VR +L+RVSAKD M GD I+LP++V+ +K+ + SE
Sbjct: 121 VRRDLTKNGSNMDSHSAQQQLRRVSAKDVMMPGDVILLPVTVQN----VATKKYDYSESE 176
Query: 722 DEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDPPRLVHRL 543
EIS+I SLEL+KD AII +NKPPGMPVQGG GIK S+D LAA S KYD+ + PRLVHRL
Sbjct: 177 KEISFIHSLELYKDSAIIAVNKPPGMPVQGGVGIKYSMDALAAKSFKYDFPESPRLVHRL 236
Query: 542 DRDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRILQRTYWALVIGTPRRSSG 363
DRDSSG+LVLGRTQTSA +LHSIFREKT GA S D + T+R LQR Y ALVIGTP+ S G
Sbjct: 237 DRDSSGVLVLGRTQTSALILHSIFREKTSGALSDDIKTTRRTLQRKYLALVIGTPKHSKG 296
Query: 362 LISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELRPLTGRKH 183
LISAPL K+VL++GKSE+ITIV ++ S HA+TEYRVI +S G+TWLEL PLTGRKH
Sbjct: 297 LISAPLAKIVLEDGKSERITIVMGTKSTSSHHALTEYRVIRSSAHGFTWLELCPLTGRKH 356
Query: 182 QLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSNPV-ESEKLPEINILPFGLDSQSGSI 6
QLRVHCA+ LGTPIVGDYKYGW AHRKW P+PW + E EKLP+ PFGLD GSI
Sbjct: 357 QLRVHCAEALGTPIVGDYKYGWYAHRKWEPMPWPESMSEDEKLPKKR--PFGLDLDGGSI 414
>ref|XP_009805027.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
[Nicotiana sylvestris]
Length = 496
Score = 409 bits (1052), Expect = e-111
Identities = 214/365 (58%), Positives = 265/365 (72%), Gaps = 5/365 (1%)
Frame = -1
Query: 1085 KQEKWLTLPPFTSTINATEVARKLSRXXXXXXXXXT-ALKWVLRCCPQLSHSLVQKLFRL 909
K+ KW TLPPFT+T+N + ++L+ ALKWV RCCP+L SLVQKLFRL
Sbjct: 86 KKGKWFTLPPFTATVNGAALGKELAGVKMDKSTNTMTALKWVQRCCPELPQSLVQKLFRL 145
Query: 908 RQVRXXXXXXXXXXXXXXKPHRLKRVSAKDEMSLGDKIVLPLSVKE--NQEVEQLQKHGF 735
RQVR R KRV+AK+ M++GD+I LP++V++ + +VE +
Sbjct: 146 RQVRRESSDVEE--------QRPKRVAAKESMNIGDRIFLPITVQKFPSDKVED-----Y 192
Query: 734 RCSEDEISYIQSLELHKDPAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDPPRL 555
SE+E+ ++ SLEL+KDP IIV+NKPPG+PVQGG GIK SLDELAA +KY+Y + PRL
Sbjct: 193 PSSEEEMKFLHSLELYKDPEIIVLNKPPGLPVQGGIGIKRSLDELAAKYMKYEYSEAPRL 252
Query: 554 VHRLDRDSSGILVLGRTQTSATVLHSIFREKTFGASSGDTENTKRILQRTYWALVIGTPR 375
VHRLDRD SGILV+GRTQ SA+VLHS+FREKTFG + D E+ KR+LQ+ YWALVIG PR
Sbjct: 253 VHRLDRDCSGILVMGRTQLSASVLHSVFREKTFGTQTEDLESKKRVLQKRYWALVIGCPR 312
Query: 374 RSSGLISAPLGKVVLDNGKSEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELRPLT 195
RS GLIS PLGKVVLDNGKSE+ITI+ D + S Q AVTEYR+I +S +GYTWLEL PLT
Sbjct: 313 RSKGLISVPLGKVVLDNGKSERITIMSDVREPSAQFAVTEYRIIGSSEKGYTWLELSPLT 372
Query: 194 GRKHQLRVHCAQVLGTPIVGDYKYGWQAHRKWRPIPWSNPVES--EKLPEINILPFGLDS 21
GRKHQLRVHCA+VLGTPIVGDYKYGWQAHRK + + S + + ++ E PF L
Sbjct: 373 GRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKLKHLSSSTSIVNLGARILEQEADPFSLRL 432
Query: 20 QSGSI 6
+GSI
Sbjct: 433 GNGSI 437