BLASTX nr result
ID: Aconitum23_contig00021448
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00021448
(585 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011023817.1| PREDICTED: chloroplast stem-loop binding pro... 191 2e-46
ref|XP_010270866.1| PREDICTED: chloroplast stem-loop binding pro... 191 2e-46
gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides] 191 3e-46
ref|XP_010270864.1| PREDICTED: chloroplast stem-loop binding pro... 190 5e-46
dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila] 188 2e-45
ref|XP_012088856.1| PREDICTED: chloroplast stem-loop binding pro... 187 3e-45
ref|XP_006417582.1| hypothetical protein EUTSA_v10007937mg [Eutr... 187 3e-45
ref|XP_002319474.2| hypothetical protein POPTR_0013s00760g [Popu... 187 3e-45
gb|KFK43232.1| hypothetical protein AALP_AA1G097200 [Arabis alpina] 187 4e-45
ref|XP_014496336.1| PREDICTED: chloroplast stem-loop binding pro... 186 1e-44
ref|XP_010475766.1| PREDICTED: chloroplast stem-loop binding pro... 185 1e-44
ref|XP_010544150.1| PREDICTED: chloroplast stem-loop binding pro... 185 2e-44
emb|CDP20929.1| unnamed protein product [Coffea canephora] 184 2e-44
gb|KOM39288.1| hypothetical protein LR48_Vigan03g267000 [Vigna a... 184 3e-44
ref|XP_010458216.1| PREDICTED: chloroplast stem-loop binding pro... 184 4e-44
ref|XP_013586906.1| PREDICTED: chloroplast stem-loop binding pro... 184 4e-44
ref|XP_006305088.1| hypothetical protein CARUB_v10009455mg [Caps... 184 4e-44
emb|CAA71589.1| g5bf [Arabidopsis thaliana] 183 5e-44
ref|NP_172405.1| chloroplast stem-loop binding protein [Arabidop... 183 5e-44
gb|AFK44229.1| unknown [Medicago truncatula] 183 5e-44
>ref|XP_011023817.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Populus euphratica]
Length = 380
Score = 191 bits (485), Expect = 2e-46
Identities = 98/133 (73%), Positives = 116/133 (87%), Gaps = 1/133 (0%)
Frame = +2
Query: 188 MARVVALQQK-QPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKI 364
MAR+VA+QQ+ QP+FSL P SLS+F+G R + +Q K++VWQ K GALQ +ASS+K I
Sbjct: 1 MARLVAVQQQTQPSFSLLPSSLSDFNGTRLHSQVQCKRRVWQTK---GALQVSASSSKNI 57
Query: 365 LIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDR 544
LIMGGTRFIGVFLSRLLVKEGHQVTLFTRGK+PI QQLPGE+D D+ DFSSKILHLKGDR
Sbjct: 58 LIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQDYADFSSKILHLKGDR 117
Query: 545 KDYDFVKTSLAAE 583
KD++FVKTSLAA+
Sbjct: 118 KDFEFVKTSLAAK 130
>ref|XP_010270866.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic isoform X2 [Nelumbo nucifera]
Length = 381
Score = 191 bits (485), Expect = 2e-46
Identities = 102/134 (76%), Positives = 114/134 (85%), Gaps = 2/134 (1%)
Frame = +2
Query: 188 MARVVALQQKQPAFSLPPYSLSEFSGIRF-NQPIQL-KKKVWQNKARGGALQATASSAKK 361
MAR+V +QQKQP+FSL P SLS+F+G+R N IQ K+K WQ K GA Q ASSAKK
Sbjct: 1 MARLVVVQQKQPSFSLLPSSLSDFNGVRLSNSSIQFSKRKEWQAK---GAFQVKASSAKK 57
Query: 362 ILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGD 541
ILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGK+PI QQLPGE+D D+ DFSSKILHLKGD
Sbjct: 58 ILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKTPITQQLPGESDQDYADFSSKILHLKGD 117
Query: 542 RKDYDFVKTSLAAE 583
RKD++FVKTSLAAE
Sbjct: 118 RKDFEFVKTSLAAE 131
>gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 380
Score = 191 bits (484), Expect = 3e-46
Identities = 98/133 (73%), Positives = 116/133 (87%), Gaps = 1/133 (0%)
Frame = +2
Query: 188 MARVVALQQK-QPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKI 364
MAR+VA+QQ+ QP+FSL P SLS+F+G R + +Q K++VWQ K GALQ +ASS+K I
Sbjct: 1 MARLVAVQQQTQPSFSLLPSSLSDFNGTRLHSQVQCKRRVWQTK---GALQVSASSSKNI 57
Query: 365 LIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDR 544
LIMGGTRFIGVFLSRLLVKEGHQVTLFTRGK+PI QQLPGE+D D+ DFSSKILHLKGDR
Sbjct: 58 LIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQDYSDFSSKILHLKGDR 117
Query: 545 KDYDFVKTSLAAE 583
KD++FVKTSLAA+
Sbjct: 118 KDFEFVKTSLAAK 130
>ref|XP_010270864.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic isoform X1 [Nelumbo nucifera]
Length = 382
Score = 190 bits (482), Expect = 5e-46
Identities = 102/135 (75%), Positives = 114/135 (84%), Gaps = 3/135 (2%)
Frame = +2
Query: 188 MARVVALQQKQPAFSLPPYSLSEFSGIRF-NQPIQL--KKKVWQNKARGGALQATASSAK 358
MAR+V +QQKQP+FSL P SLS+F+G+R N IQ K+K WQ K GA Q ASSAK
Sbjct: 1 MARLVVVQQKQPSFSLLPSSLSDFNGVRLSNSSIQQFSKRKEWQAK---GAFQVKASSAK 57
Query: 359 KILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKG 538
KILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGK+PI QQLPGE+D D+ DFSSKILHLKG
Sbjct: 58 KILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKTPITQQLPGESDQDYADFSSKILHLKG 117
Query: 539 DRKDYDFVKTSLAAE 583
DRKD++FVKTSLAAE
Sbjct: 118 DRKDFEFVKTSLAAE 132
>dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]
Length = 379
Score = 188 bits (477), Expect = 2e-45
Identities = 97/132 (73%), Positives = 113/132 (85%)
Frame = +2
Query: 188 MARVVALQQKQPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKIL 367
MA+++ LQQ QP+FSL SLS+F+G + + +Q K+KV+Q K GAL +ASS KKIL
Sbjct: 1 MAKIMMLQQSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPK---GALYVSASSEKKIL 57
Query: 368 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDRK 547
IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIA+QLPGE+D DF DFSSKILHLKGDRK
Sbjct: 58 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRK 117
Query: 548 DYDFVKTSLAAE 583
DYDFVK+SL+AE
Sbjct: 118 DYDFVKSSLSAE 129
>ref|XP_012088856.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Jatropha curcas]
gi|643708446|gb|KDP23362.1| hypothetical protein
JCGZ_23195 [Jatropha curcas]
Length = 380
Score = 187 bits (475), Expect = 3e-45
Identities = 96/133 (72%), Positives = 115/133 (86%), Gaps = 1/133 (0%)
Frame = +2
Query: 188 MARVVALQQK-QPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKI 364
MAR+VA+QQ+ QP+FSL P S S+F+G R + IQ K+KVWQ K GALQ TAS++K I
Sbjct: 1 MARLVAVQQQTQPSFSLLPSSFSDFNGTRLHSQIQCKRKVWQTK---GALQVTASTSKNI 57
Query: 365 LIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDR 544
LIMGGTRFIGVFLSRLLVKEGHQVTLFTRGK+PI QQLPGE+D ++ DFSSKILHLKGDR
Sbjct: 58 LIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQEYADFSSKILHLKGDR 117
Query: 545 KDYDFVKTSLAAE 583
KD++FVK+SL+A+
Sbjct: 118 KDFEFVKSSLSAK 130
>ref|XP_006417582.1| hypothetical protein EUTSA_v10007937mg [Eutrema salsugineum]
gi|557095353|gb|ESQ35935.1| hypothetical protein
EUTSA_v10007937mg [Eutrema salsugineum]
Length = 379
Score = 187 bits (475), Expect = 3e-45
Identities = 97/132 (73%), Positives = 113/132 (85%)
Frame = +2
Query: 188 MARVVALQQKQPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKIL 367
MA+++ LQQ QP+FSL SLS+F+G + + +Q K+KV+Q K GAL +ASS KKIL
Sbjct: 1 MAKMMMLQQSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPK---GALYVSASSEKKIL 57
Query: 368 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDRK 547
IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIA+QLPGE+D DF DFSSKILHLKGDRK
Sbjct: 58 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRK 117
Query: 548 DYDFVKTSLAAE 583
DYDFVK+SL+AE
Sbjct: 118 DYDFVKSSLSAE 129
>ref|XP_002319474.2| hypothetical protein POPTR_0013s00760g [Populus trichocarpa]
gi|118487652|gb|ABK95651.1| unknown [Populus
trichocarpa] gi|550324645|gb|EEE95397.2| hypothetical
protein POPTR_0013s00760g [Populus trichocarpa]
Length = 380
Score = 187 bits (475), Expect = 3e-45
Identities = 96/133 (72%), Positives = 115/133 (86%), Gaps = 1/133 (0%)
Frame = +2
Query: 188 MARVVALQQK-QPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKI 364
MAR+VA+QQ+ QP+FSL P SLS+F+G R + ++ K++VWQ K GALQ +ASS+K I
Sbjct: 1 MARLVAVQQQTQPSFSLLPSSLSDFNGTRLHSQVRCKRRVWQTK---GALQVSASSSKNI 57
Query: 365 LIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDR 544
LIMGGTRFIGVFLSRLLVKEGHQVTLFTRGK+PI Q LPGE+D D+ DFSSKILHLKGDR
Sbjct: 58 LIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDR 117
Query: 545 KDYDFVKTSLAAE 583
KD++FVKTSLAA+
Sbjct: 118 KDFEFVKTSLAAK 130
>gb|KFK43232.1| hypothetical protein AALP_AA1G097200 [Arabis alpina]
Length = 379
Score = 187 bits (474), Expect = 4e-45
Identities = 96/132 (72%), Positives = 113/132 (85%)
Frame = +2
Query: 188 MARVVALQQKQPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKIL 367
MA+++ LQQ QP+FSL SLS+F+G + + +Q K+KV+Q K GAL +ASS KKIL
Sbjct: 1 MAKMMMLQQSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPK---GALYVSASSEKKIL 57
Query: 368 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDRK 547
IMGGTRFIG+FLSRLLVKEGHQVTLFTRGKSPIA+QLPGE+D DF DFSSKILHLKGDRK
Sbjct: 58 IMGGTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRK 117
Query: 548 DYDFVKTSLAAE 583
DYDFVK+SL+AE
Sbjct: 118 DYDFVKSSLSAE 129
>ref|XP_014496336.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Vigna radiata var. radiata]
Length = 378
Score = 186 bits (471), Expect = 1e-44
Identities = 95/132 (71%), Positives = 111/132 (84%)
Frame = +2
Query: 188 MARVVALQQKQPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKIL 367
MAR+VALQQ Q +FS SLS+FSG R + +QLK+K+WQ K G+ +ASS KKIL
Sbjct: 1 MARMVALQQNQLSFSPLASSLSDFSGTRLHTQLQLKRKLWQPK---GSFSVSASSTKKIL 57
Query: 368 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDRK 547
IMGGTRFIGVFLSRLLVKEGHQVTLFTRGK+P+ QQLPGE+D D+ DFSSKILHLKGDRK
Sbjct: 58 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDGDYADFSSKILHLKGDRK 117
Query: 548 DYDFVKTSLAAE 583
DY+FVK+SL+AE
Sbjct: 118 DYEFVKSSLSAE 129
>ref|XP_010475766.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Camelina sativa]
Length = 379
Score = 185 bits (470), Expect = 1e-44
Identities = 97/132 (73%), Positives = 112/132 (84%)
Frame = +2
Query: 188 MARVVALQQKQPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKIL 367
MA+++ LQQ QP+FSL SLS+F+G + + +Q K+KV Q K GAL +ASS KKIL
Sbjct: 1 MAKMMMLQQHQPSFSLLTSSLSDFNGAKIHLQVQYKRKVHQPK---GALYVSASSEKKIL 57
Query: 368 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDRK 547
IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIA+QLPGE+D DF DFSSKILHLKGDRK
Sbjct: 58 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRK 117
Query: 548 DYDFVKTSLAAE 583
DYDFVK+SL+AE
Sbjct: 118 DYDFVKSSLSAE 129
>ref|XP_010544150.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Tarenaya hassleriana]
Length = 379
Score = 185 bits (469), Expect = 2e-44
Identities = 96/132 (72%), Positives = 112/132 (84%)
Frame = +2
Query: 188 MARVVALQQKQPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKIL 367
MA++V LQQ QP+FS SLS+F+G + N +Q K+K ++ K GAL +ASSAKKIL
Sbjct: 1 MAKMVVLQQHQPSFSPLSSSLSDFNGTKLNFRVQYKRKAYRPK---GALHVSASSAKKIL 57
Query: 368 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDRK 547
IMGGTRFIGVFLSRLLVK+GHQVTLFTRGK+PIA+QLPGE+D DF DFSSKILHLKGDRK
Sbjct: 58 IMGGTRFIGVFLSRLLVKDGHQVTLFTRGKAPIAKQLPGESDEDFADFSSKILHLKGDRK 117
Query: 548 DYDFVKTSLAAE 583
DYDFVK+SLAAE
Sbjct: 118 DYDFVKSSLAAE 129
>emb|CDP20929.1| unnamed protein product [Coffea canephora]
Length = 378
Score = 184 bits (468), Expect = 2e-44
Identities = 94/132 (71%), Positives = 111/132 (84%)
Frame = +2
Query: 188 MARVVALQQKQPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKIL 367
MA + A+Q KQP+FS+ P SLS+F+GIR +Q K+KV + GAL +AS+AKKIL
Sbjct: 1 MASMAAVQAKQPSFSVLPSSLSDFNGIRLTTSVQYKRKVLHPR---GALHVSASAAKKIL 57
Query: 368 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDRK 547
IMGGTRFIG+FLSR LVKEGHQVTLFTRGK+PIAQQLPGE+D DF DFSSKILHLKGDRK
Sbjct: 58 IMGGTRFIGIFLSRFLVKEGHQVTLFTRGKAPIAQQLPGESDTDFADFSSKILHLKGDRK 117
Query: 548 DYDFVKTSLAAE 583
D++FVK+SLAAE
Sbjct: 118 DFEFVKSSLAAE 129
>gb|KOM39288.1| hypothetical protein LR48_Vigan03g267000 [Vigna angularis]
Length = 378
Score = 184 bits (467), Expect = 3e-44
Identities = 94/132 (71%), Positives = 111/132 (84%)
Frame = +2
Query: 188 MARVVALQQKQPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKIL 367
MAR+VALQQ Q +FS SLS+FSG R + +QLK+K+WQ K G+ +ASS KKIL
Sbjct: 1 MARMVALQQNQLSFSPLASSLSDFSGTRLHTQLQLKRKLWQPK---GSFSVSASSTKKIL 57
Query: 368 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDRK 547
IMGGTRFIGVFLSRLLVKEGHQVTLFTRGK+P+ QQLPGE+D D+ DFSSKILHLKGDRK
Sbjct: 58 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDGDYADFSSKILHLKGDRK 117
Query: 548 DYDFVKTSLAAE 583
D++FVK+SL+AE
Sbjct: 118 DFEFVKSSLSAE 129
>ref|XP_010458216.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Camelina sativa]
Length = 379
Score = 184 bits (466), Expect = 4e-44
Identities = 96/132 (72%), Positives = 111/132 (84%)
Frame = +2
Query: 188 MARVVALQQKQPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKIL 367
MA+++ LQQ QP+FSL SLS+F+G + + +Q K+KV Q K G L +ASS KKIL
Sbjct: 1 MAKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPK---GGLYVSASSEKKIL 57
Query: 368 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDRK 547
IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIA+QLPGE+D DF DFSSKILHLKGDRK
Sbjct: 58 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRK 117
Query: 548 DYDFVKTSLAAE 583
DYDFVK+SL+AE
Sbjct: 118 DYDFVKSSLSAE 129
>ref|XP_013586906.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Brassica oleracea var. oleracea]
gi|923877393|ref|XP_013711566.1| PREDICTED: chloroplast
stem-loop binding protein of 41 kDa b,
chloroplastic-like [Brassica napus]
gi|674938358|emb|CDX94984.1| BnaC05g06870D [Brassica
napus]
Length = 378
Score = 184 bits (466), Expect = 4e-44
Identities = 95/132 (71%), Positives = 111/132 (84%)
Frame = +2
Query: 188 MARVVALQQKQPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKIL 367
MA+++ LQQ QP+ SL SLS+F+G + + +Q K+KV Q K GAL +ASS KKIL
Sbjct: 1 MAKMMMLQQSQPSLSLLTSSLSDFNGAKLHSQVQYKRKVQQPK---GALYVSASSEKKIL 57
Query: 368 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDRK 547
IMGGTRFIG+FLSRLLVKEGHQVTLFTRGKSPIA+QLPGE+D DF DFSSKILHLKGDRK
Sbjct: 58 IMGGTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRK 117
Query: 548 DYDFVKTSLAAE 583
DYDFVK+SL+AE
Sbjct: 118 DYDFVKSSLSAE 129
>ref|XP_006305088.1| hypothetical protein CARUB_v10009455mg [Capsella rubella]
gi|482573799|gb|EOA37986.1| hypothetical protein
CARUB_v10009455mg [Capsella rubella]
Length = 379
Score = 184 bits (466), Expect = 4e-44
Identities = 96/132 (72%), Positives = 112/132 (84%)
Frame = +2
Query: 188 MARVVALQQKQPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKIL 367
MA+++ LQQ QP+FSL SLS+F+G + + +Q K+KV Q K GAL +ASS KKIL
Sbjct: 1 MAKMMMLQQHQPSFSLLNSSLSDFNGAKLHLQVQYKRKVHQPK---GALYVSASSEKKIL 57
Query: 368 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDRK 547
IMGGTRFIGVFLSRLLVKEGHQVTLFTRGK+PIA+QLPGE+D DF DFSSKILHLKGDRK
Sbjct: 58 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKTPIAKQLPGESDQDFADFSSKILHLKGDRK 117
Query: 548 DYDFVKTSLAAE 583
DYDFVK+SL+AE
Sbjct: 118 DYDFVKSSLSAE 129
>emb|CAA71589.1| g5bf [Arabidopsis thaliana]
Length = 378
Score = 183 bits (465), Expect = 5e-44
Identities = 95/132 (71%), Positives = 112/132 (84%)
Frame = +2
Query: 188 MARVVALQQKQPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKIL 367
MA+++ LQQ QP+FSL SLS+F+G + + +Q K+KV Q K GAL +ASS KKIL
Sbjct: 1 MAKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPK---GALYVSASSEKKIL 57
Query: 368 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDRK 547
IMGGTRFIG+FLSR+LVKEGHQVTLFTRGKSPIA+QLPGE+D DF DFSSKILHLKGDRK
Sbjct: 58 IMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRK 117
Query: 548 DYDFVKTSLAAE 583
DYDFVK+SL+AE
Sbjct: 118 DYDFVKSSLSAE 129
>ref|NP_172405.1| chloroplast stem-loop binding protein [Arabidopsis thaliana]
gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName:
Full=Chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic; Short=CSP41-b; AltName:
Full=Heteroglycan-interacting protein 1.3; AltName:
Full=Protein CHLOROPLAST RNA BINDING; AltName:
Full=Protein Gb5f; Flags: Precursor
gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340
[Arabidopsis thaliana]
gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6
[Arabidopsis thaliana] gi|4337177|gb|AAD18098.1|
Identical to gb|Y10557 g5bf gene from Arabidopsis
thaliana. ESTs gb|R30578, gb|R90475, gb|T22384,
gb|T22425, gb|N64934 and gb|T46767 come from this gene
[Arabidopsis thaliana] gi|14334754|gb|AAK59555.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|17979099|gb|AAL47493.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|332190310|gb|AEE28431.1|
chloroplast stem-loop binding protein [Arabidopsis
thaliana]
Length = 378
Score = 183 bits (465), Expect = 5e-44
Identities = 95/132 (71%), Positives = 112/132 (84%)
Frame = +2
Query: 188 MARVVALQQKQPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKIL 367
MA+++ LQQ QP+FSL SLS+F+G + + +Q K+KV Q K GAL +ASS KKIL
Sbjct: 1 MAKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPK---GALYVSASSEKKIL 57
Query: 368 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDRK 547
IMGGTRFIG+FLSR+LVKEGHQVTLFTRGKSPIA+QLPGE+D DF DFSSKILHLKGDRK
Sbjct: 58 IMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRK 117
Query: 548 DYDFVKTSLAAE 583
DYDFVK+SL+AE
Sbjct: 118 DYDFVKSSLSAE 129
>gb|AFK44229.1| unknown [Medicago truncatula]
Length = 378
Score = 183 bits (465), Expect = 5e-44
Identities = 97/132 (73%), Positives = 108/132 (81%)
Frame = +2
Query: 188 MARVVALQQKQPAFSLPPYSLSEFSGIRFNQPIQLKKKVWQNKARGGALQATASSAKKIL 367
MAR+VALQQ Q +F SLS+F+G R IQLK+K WQ K G+L +ASS KKIL
Sbjct: 1 MARLVALQQNQLSFPPLASSLSDFNGTRLQTHIQLKRKTWQPK---GSLIVSASSTKKIL 57
Query: 368 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAQQLPGEADADFLDFSSKILHLKGDRK 547
IMGGTRFIGVFLSR LVKEGHQVTLFTRGK+PI QQLPGE+D DF DFSSKILHLKGDRK
Sbjct: 58 IMGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRK 117
Query: 548 DYDFVKTSLAAE 583
DYDFVK+SL+AE
Sbjct: 118 DYDFVKSSLSAE 129