BLASTX nr result
ID: Aconitum23_contig00021063
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00021063
(683 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011002267.1| PREDICTED: probable RNA helicase SDE3 [Popul... 83 2e-27
ref|XP_012072970.1| PREDICTED: uncharacterized protein LOC105634... 76 5e-26
ref|XP_012072983.1| PREDICTED: probable RNA helicase SDE3 isofor... 74 3e-25
ref|XP_012073014.1| PREDICTED: probable RNA helicase SDE3 isofor... 74 3e-25
emb|CDP04869.1| unnamed protein product [Coffea canephora] 86 4e-25
ref|XP_010040051.1| PREDICTED: probable RNA helicase SDE3 [Eucal... 80 3e-24
ref|XP_006380500.1| hypothetical protein POPTR_0007s07450g [Popu... 79 5e-24
ref|XP_011022270.1| PREDICTED: uncharacterized protein LOC105124... 82 7e-24
ref|XP_002306375.1| hypothetical protein POPTR_0005s09210g [Popu... 75 2e-23
emb|CDP04870.1| unnamed protein product [Coffea canephora] 80 2e-23
ref|XP_007043250.1| P-loop containing nucleoside triphosphate hy... 77 4e-23
ref|XP_010034884.1| PREDICTED: probable RNA helicase SDE3 [Eucal... 76 4e-23
gb|KHG07974.1| putative RNA helicase SDE3 -like protein [Gossypi... 69 1e-22
gb|KCW53972.1| hypothetical protein EUGRSUZ_J03176 [Eucalyptus g... 70 1e-21
ref|XP_012451427.1| PREDICTED: probable RNA helicase SDE3 isofor... 69 7e-21
ref|XP_012451418.1| PREDICTED: probable RNA helicase SDE3 isofor... 69 7e-21
ref|XP_006484508.1| PREDICTED: probable RNA helicase SDE3-like [... 76 9e-21
gb|KDO69868.1| hypothetical protein CISIN_1g002130mg [Citrus sin... 75 1e-20
ref|XP_006437625.1| hypothetical protein CICLE_v10030734mg [Citr... 75 1e-20
gb|KDO69869.1| hypothetical protein CISIN_1g002130mg [Citrus sin... 75 1e-20
>ref|XP_011002267.1| PREDICTED: probable RNA helicase SDE3 [Populus euphratica]
Length = 680
Score = 82.8 bits (203), Expect(2) = 2e-27
Identities = 47/108 (43%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Frame = +2
Query: 68 DKRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSLFKFLYPDQT 247
++ T V V+F EDF QH S KYDV+F FN VCLKR QAIE AA++PS FL+PD
Sbjct: 361 ERSTRVLVEFGEDFLLQHHSTRKYDVSFSFNRVCLKRAHQAIE-AASDPSFRSFLFPDGV 419
Query: 248 T-KFTPILPASHIVSHGNFIEK*AFSVKQVFKLEGGPPYTIEGMLTIN 388
+ K PI H +H + + + +V+++ +G PPY +EG L ++
Sbjct: 420 SKKIFPISTPLHFCNHKLDVYQ-SSAVREILSFQGPPPYLVEGPLCLS 466
Score = 67.8 bits (164), Expect(2) = 2e-27
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 17/83 (20%)
Frame = +3
Query: 396 KQLSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPE----------- 542
KQLSRTG +IQ +LQI Q+SP R+L+CAP+N TC++L + L IPE
Sbjct: 470 KQLSRTGLVIQEAVLQIYQSSPKLRILICAPINRTCDLLMQSLNNDIPESDMFRANAAFR 529
Query: 543 ------LNIFSLCTSESECIVCP 593
++I C + EC CP
Sbjct: 530 EIDGVPIDILPSCAYKGECFTCP 552
>ref|XP_012072970.1| PREDICTED: uncharacterized protein LOC105634689 [Jatropha curcas]
gi|643740484|gb|KDP46082.1| hypothetical protein
JCGZ_06593 [Jatropha curcas]
Length = 795
Score = 76.3 bits (186), Expect(2) = 5e-26
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +2
Query: 71 KRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSLFKFLYPDQTT 250
K T V V+F E FHSQH S+ KYDV+F FN VCLKR +AIE AA++PS F +P +
Sbjct: 477 KSTTVLVEFGEGFHSQHYSSRKYDVSFSFNRVCLKRGHEAIE-AASDPSFESFTFP--SF 533
Query: 251 KFTPILPASHIVSHGNFIEK*AFS-VKQVFKLEGGPPYTIEGMLTI 385
+ ++ AS ++ S V+Q+ K G PPY IEG L +
Sbjct: 534 HYRTLISASSPSYFNYKLDTDQMSAVQQILKFRGSPPYLIEGPLCV 579
Score = 69.3 bits (168), Expect(2) = 5e-26
Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 17/83 (20%)
Frame = +3
Query: 396 KQLSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPE----------- 542
K LSRTG +IQ +LQI + S D R+L+CAP+NSTC++LTR LK IPE
Sbjct: 588 KVLSRTGLVIQEAMLQIYEKSQDHRILVCAPINSTCDLLTRSLKKYIPESDIFRGNAAFR 647
Query: 543 ------LNIFSLCTSESECIVCP 593
L+I C + EC CP
Sbjct: 648 EVDGVPLDILPSCVLKGECFACP 670
>ref|XP_012072983.1| PREDICTED: probable RNA helicase SDE3 isoform X1 [Jatropha curcas]
gi|802539832|ref|XP_012072990.1| PREDICTED: probable RNA
helicase SDE3 isoform X1 [Jatropha curcas]
gi|802539834|ref|XP_012072998.1| PREDICTED: probable RNA
helicase SDE3 isoform X1 [Jatropha curcas]
gi|802539836|ref|XP_012073006.1| PREDICTED: probable RNA
helicase SDE3 isoform X1 [Jatropha curcas]
gi|643740489|gb|KDP46087.1| hypothetical protein
JCGZ_06598 [Jatropha curcas]
Length = 730
Score = 73.9 bits (180), Expect(2) = 3e-25
Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +2
Query: 71 KRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSLFKFLYPDQTT 250
K T V V+F + FHSQH S+ KYDV+F FN VCLKR QAIE AA++P+ F +P +
Sbjct: 405 KSTTVLVEFGKGFHSQHYSSRKYDVSFSFNRVCLKRGHQAIE-AASHPTFESFTFPSFRS 463
Query: 251 KFTPILPASHIVSHGNFIEK*AFS-VKQVFKLEGGPPYTIEGMLTI 385
+ ++ AS ++ S V+Q+ K G PPY IEG L +
Sbjct: 464 R--RLISASSPSYFNYKLDTDQMSAVQQIIKFHGSPPYLIEGPLCV 507
Score = 68.9 bits (167), Expect(2) = 3e-25
Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 17/83 (20%)
Frame = +3
Query: 396 KQLSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPE----------- 542
K LSRTG +IQ +LQI + S D R+L+CAP+NSTC++LTR LK IPE
Sbjct: 516 KALSRTGLVIQEAMLQIYKKSRDHRILVCAPINSTCDLLTRSLKKYIPESDIFRGNAAFR 575
Query: 543 ------LNIFSLCTSESECIVCP 593
L+I C + EC CP
Sbjct: 576 EVDGVPLDILPSCVLKGECFACP 598
>ref|XP_012073014.1| PREDICTED: probable RNA helicase SDE3 isoform X2 [Jatropha curcas]
Length = 723
Score = 73.9 bits (180), Expect(2) = 3e-25
Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +2
Query: 71 KRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSLFKFLYPDQTT 250
K T V V+F + FHSQH S+ KYDV+F FN VCLKR QAIE AA++P+ F +P +
Sbjct: 405 KSTTVLVEFGKGFHSQHYSSRKYDVSFSFNRVCLKRGHQAIE-AASHPTFESFTFPSFRS 463
Query: 251 KFTPILPASHIVSHGNFIEK*AFS-VKQVFKLEGGPPYTIEGMLTI 385
+ ++ AS ++ S V+Q+ K G PPY IEG L +
Sbjct: 464 R--RLISASSPSYFNYKLDTDQMSAVQQIIKFHGSPPYLIEGPLCV 507
Score = 68.9 bits (167), Expect(2) = 3e-25
Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 17/83 (20%)
Frame = +3
Query: 396 KQLSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPE----------- 542
K LSRTG +IQ +LQI + S D R+L+CAP+NSTC++LTR LK IPE
Sbjct: 516 KALSRTGLVIQEAMLQIYKKSRDHRILVCAPINSTCDLLTRSLKKYIPESDIFRGNAAFR 575
Query: 543 ------LNIFSLCTSESECIVCP 593
L+I C + EC CP
Sbjct: 576 EVDGVPLDILPSCVLKGECFACP 598
>emb|CDP04869.1| unnamed protein product [Coffea canephora]
Length = 724
Score = 85.9 bits (211), Expect(2) = 4e-25
Identities = 52/120 (43%), Positives = 71/120 (59%), Gaps = 5/120 (4%)
Frame = +2
Query: 41 GTLDRVMDGDKRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSL 220
G + RV+ K +V +F E F+SQHRS CKYDV F FN VCLKR QAI AA + +L
Sbjct: 406 GVIYRVV---KSNLVLAEFGESFYSQHRSECKYDVKFSFNRVCLKRAHQAI--AAVSSAL 460
Query: 221 FK-FLYPDQTTKFTPILPASHIVSHGNFI----EK*AFSVKQVFKLEGGPPYTIEGMLTI 385
F+ FL+PD LP ++V ++ +K F V Q+ +L+G PPY +EG + I
Sbjct: 461 FRNFLFPD--------LPPENVVLSTQYVDNRYQKANFVVHQILRLQGAPPYLVEGPMCI 512
Score = 56.6 bits (135), Expect(2) = 4e-25
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 19/84 (22%)
Frame = +3
Query: 399 QLSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPELNIF-------- 554
+LSRTG +I LQIL+ P ++LLCAP+N TC++L R LK +I + ++F
Sbjct: 516 RLSRTGVVIVEAALQILRLDPSKKILLCAPINRTCDLLMRGLKKEISDSDMFRANAAFRE 575
Query: 555 -----------SLCTSESECIVCP 593
L S++EC CP
Sbjct: 576 LDGIPVDILPSCLYESQTECFSCP 599
>ref|XP_010040051.1| PREDICTED: probable RNA helicase SDE3 [Eucalyptus grandis]
gi|702507872|ref|XP_010040052.1| PREDICTED: probable RNA
helicase SDE3 [Eucalyptus grandis]
gi|702507875|ref|XP_010040053.1| PREDICTED: probable RNA
helicase SDE3 [Eucalyptus grandis]
Length = 685
Score = 79.7 bits (195), Expect(2) = 3e-24
Identities = 42/105 (40%), Positives = 65/105 (61%)
Frame = +2
Query: 65 GDKRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSLFKFLYPDQ 244
G K + V +F +DFHSQH S+ +Y+++F FN VCLKR QA+E AAT+PS FL+P+
Sbjct: 373 GKKSSDVLAEFGDDFHSQHHSSSRYNISFSFNRVCLKRAHQAVE-AATDPSFHNFLFPEC 431
Query: 245 TTKFTPILPASHIVSHGNFIEK*AFSVKQVFKLEGGPPYTIEGML 379
+ S S+G +E+ +++Q+ L+G P+ +EG L
Sbjct: 432 PVRRDSFALPSLYFSNGVHLEQ-RSAIRQILALKGSAPFLMEGPL 475
Score = 59.7 bits (143), Expect(2) = 3e-24
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 19/83 (22%)
Frame = +3
Query: 402 LSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPELNIF--------- 554
LSR G +++ + Q+ Q S DSR+L+ AP+N TC+ L R LK KIP+ IF
Sbjct: 482 LSRAGVVVREAVWQVYQRSKDSRILVAAPINKTCDALMRSLKDKIPDSEIFRVNAAFRKI 541
Query: 555 ----------SLCTSESECIVCP 593
L ESEC CP
Sbjct: 542 DVVPDDILPSCLYKEESECFACP 564
>ref|XP_006380500.1| hypothetical protein POPTR_0007s07450g [Populus trichocarpa]
gi|550334336|gb|ERP58297.1| hypothetical protein
POPTR_0007s07450g [Populus trichocarpa]
Length = 687
Score = 78.6 bits (192), Expect(2) = 5e-24
Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Frame = +2
Query: 68 DKRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSLFKFLYPDQT 247
++ T V V+F +DF QH S KYDV+F FN VCLKR AIE AA++P FL+PD
Sbjct: 369 ERSTRVVVEFGKDFLLQHHSTRKYDVSFSFNRVCLKRAHHAIE-AASDPLFKSFLFPDGV 427
Query: 248 T-KFTPILPASHIVSHGNFIEK*AFSVKQVFKLEGGPPYTIEGMLTIN 388
+ K PI H +H + + + +V+++ +G PPY +EG L +N
Sbjct: 428 SKKIFPISTPLHFCNHKLDVYQ-SSAVREILSFQGPPPYIVEGPLCLN 474
Score = 60.1 bits (144), Expect(2) = 5e-24
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 17/82 (20%)
Frame = +3
Query: 399 QLSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPE------------ 542
+LSRTG +IQ +LQI Q+S R+L+CAP+N TC++L + L IP+
Sbjct: 478 ELSRTGLVIQEAVLQIYQSSSKLRILICAPINRTCDLLMQSLNNDIPKSDMFRANATFRE 537
Query: 543 -----LNIFSLCTSESECIVCP 593
++I C + EC CP
Sbjct: 538 IDGVPIDILPSCAYKGECFTCP 559
>ref|XP_011022270.1| PREDICTED: uncharacterized protein LOC105124103 [Populus
euphratica]
Length = 634
Score = 81.6 bits (200), Expect(2) = 7e-24
Identities = 50/114 (43%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Frame = +2
Query: 41 GTLDRVMDGDKRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSL 220
G + RV+ + T+V V+F EDFH QH S KYDV+F FN VCLKR QAIE AA++PS
Sbjct: 408 GVIYRVV---RSTVVLVEFGEDFHLQHHSTRKYDVSFSFNRVCLKRAHQAIE-AASDPSF 463
Query: 221 FKFLYPDQT-TKFTPILPASHIVSHGNFIEK*AFSVKQVFKLEGGPPYTIEGML 379
FL+PD K P H ++H +V ++ G PPY +EG L
Sbjct: 464 KNFLFPDFVHRKSIPTSTPLHFINH-KLDAYQRSAVLEILSFRGPPPYLVEGPL 516
Score = 56.6 bits (135), Expect(2) = 7e-24
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = +3
Query: 396 KQLSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIP 539
KQLSRTG ++Q +LQI ++S R+L+CAP+N TC++L + LK IP
Sbjct: 523 KQLSRTGLVVQEAVLQIYRSSSKHRILICAPINRTCDVLMQSLKIDIP 570
>ref|XP_002306375.1| hypothetical protein POPTR_0005s09210g [Populus trichocarpa]
gi|222855824|gb|EEE93371.1| hypothetical protein
POPTR_0005s09210g [Populus trichocarpa]
Length = 773
Score = 74.7 bits (182), Expect(2) = 2e-23
Identities = 48/114 (42%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Frame = +2
Query: 41 GTLDRVMDGDKRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSL 220
G + RV+ + TIV V+F EDF QH S +YDV+F FN VCLKR QAIE AA++PS
Sbjct: 445 GVIYRVV---RSTIVLVEFGEDFLLQHHSTREYDVSFSFNRVCLKRAHQAIE-AASDPSF 500
Query: 221 FKFLYPDQT-TKFTPILPASHIVSHGNFIEK*AFSVKQVFKLEGGPPYTIEGML 379
FL+P+ K P H ++H +V ++ G PPY +EG L
Sbjct: 501 KNFLFPNFVHRKSIPTSTPLHFINH-KLDAYQRSAVHEILSFRGPPPYLVEGPL 553
Score = 62.4 bits (150), Expect(2) = 2e-23
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 17/83 (20%)
Frame = +3
Query: 396 KQLSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPE----------- 542
KQLSR G ++Q +LQI Q+S R+L+CAP+N TC++L + LK IPE
Sbjct: 560 KQLSRIGLVVQEAVLQIYQSSSKHRILICAPINRTCDVLMQSLKIDIPESDMFRANAAFR 619
Query: 543 ------LNIFSLCTSESECIVCP 593
++I + C + +C CP
Sbjct: 620 EIDGVPIDILTSCVYKRDCFTCP 642
>emb|CDP04870.1| unnamed protein product [Coffea canephora]
Length = 722
Score = 80.1 bits (196), Expect(2) = 2e-23
Identities = 49/120 (40%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
Frame = +2
Query: 41 GTLDRVMDGDKRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSL 220
G + RV+ K +V +F + F+SQHR CKYDV F FN VCLKR QAI ++ S
Sbjct: 403 GVIYRVV---KSNLVLAEFGKSFYSQHRPECKYDVKFSFNRVCLKRAHQAI-ADVSSASF 458
Query: 221 FKFLYPDQTTKFTPILPASHIVSH----GNFIEK*AFSVKQVFKLEGGPPYTIEGMLTIN 388
FL+PD LP H V N +K F+V Q+ +L+G PPY +EG + I+
Sbjct: 459 RNFLFPD--------LPPEHEVLSTQRVDNRYQKANFAVHQILRLQGAPPYLVEGPMCIS 510
Score = 57.0 bits (136), Expect(2) = 2e-23
Identities = 26/56 (46%), Positives = 39/56 (69%)
Frame = +3
Query: 387 TSGKQLSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPELNIF 554
+ G LSRTG +I LQIL++ P ++LLCAP+N TC++L R LK ++ + +IF
Sbjct: 510 SEGGHLSRTGVVIVEAALQILRSDPSKKILLCAPVNKTCDLLLRGLKKEMSDSDIF 565
>ref|XP_007043250.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein, putative [Theobroma cacao]
gi|508707185|gb|EOX99081.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein, putative
[Theobroma cacao]
Length = 707
Score = 77.4 bits (189), Expect(2) = 4e-23
Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 2/115 (1%)
Frame = +2
Query: 41 GTLDRVMDGDKRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSL 220
G + RV+ K T + V+F+E FHSQH C+Y++ F FN VCLKR QAI A+T L
Sbjct: 386 GVIYRVV---KSTTILVEFEEKFHSQHDPTCRYNIRFSFNRVCLKRAHQAIAAASTPAPL 442
Query: 221 F-KFLYPDQTTK-FTPILPASHIVSHGNFIEK*AFSVKQVFKLEGGPPYTIEGML 379
F KFL+P+ ++ P + H+ +H + +V+++ G PP+ ++G L
Sbjct: 443 FQKFLFPNSVSQNLMPTSTSFHLYNH-KLGQNEKSAVRRILNFRGPPPFLVKGPL 496
Score = 58.2 bits (139), Expect(2) = 4e-23
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 19/85 (22%)
Frame = +3
Query: 396 KQLSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPELNIF------- 554
KQLSRTG +I+ +LQI Q S++L+CAP+NSTC+++ R L +IP ++F
Sbjct: 509 KQLSRTGLVIKEAVLQIYQRHQGSKILVCAPINSTCDMIMRSLNLEIPVSDMFRANAAFR 568
Query: 555 ------------SLCTSESECIVCP 593
L E++C CP
Sbjct: 569 EREGVPIDILPSCLYEEETDCFTCP 593
>ref|XP_010034884.1| PREDICTED: probable RNA helicase SDE3 [Eucalyptus grandis]
Length = 548
Score = 75.9 bits (185), Expect(2) = 4e-23
Identities = 40/103 (38%), Positives = 63/103 (61%)
Frame = +2
Query: 71 KRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSLFKFLYPDQTT 250
K +IV F ++FHSQH S+ +Y+++F FN VCLKR QA+E AAT+PS FL+P+
Sbjct: 238 KSSIVLAKFGDEFHSQHHSSSRYNISFSFNRVCLKRAHQAVE-AATDPSFHNFLFPECPV 296
Query: 251 KFTPILPASHIVSHGNFIEK*AFSVKQVFKLEGGPPYTIEGML 379
+ S S+G +E+ +++Q+ L+G P+ +E L
Sbjct: 297 RRDSFALPSFYFSNGVHLEQ-RSAIRQILALKGSAPFLMEDPL 338
Score = 59.7 bits (143), Expect(2) = 4e-23
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 19/83 (22%)
Frame = +3
Query: 402 LSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPELNIF--------- 554
LSR G +++ + Q+ Q S DSR+L+ AP+N TC+ L R LK KIP+ IF
Sbjct: 345 LSRAGVVVREAVWQVYQRSKDSRILVAAPINKTCDALMRSLKDKIPDSEIFRVNAAFRKI 404
Query: 555 ----------SLCTSESECIVCP 593
L ESEC CP
Sbjct: 405 DVVPDDILPSCLYKEESECFACP 427
>gb|KHG07974.1| putative RNA helicase SDE3 -like protein [Gossypium arboreum]
Length = 679
Score = 68.9 bits (167), Expect(2) = 1e-22
Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Frame = +2
Query: 41 GTLDRVMDGDKRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSL 220
G L RV+ K T + V+F E+FHSQH S C+Y+++F FN VCLKR QAI AA + SL
Sbjct: 360 GVLYRVV---KSTTILVEFGEEFHSQHHSTCRYNISFSFNRVCLKRAHQAI--AAVSASL 414
Query: 221 F-KFLYPDQTTKFTPILPASHIVSHGNFIEK*AFSVKQVFKLEGGPPYTIEGML 379
KFL+P+ ++ + + + N +V ++ + PP+ ++G L
Sbjct: 415 IGKFLFPNSFSQHSMHNSEYYNLYDHNLNLDEKSAVHRILNIRAPPPFLVKGPL 468
Score = 65.1 bits (157), Expect(2) = 1e-22
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +3
Query: 396 KQLSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPELNIF 554
KQLSRTG +++ +LQI + P S++L+CAP+NSTC++LTR LK IP +IF
Sbjct: 481 KQLSRTGLVVKEAVLQIYRRHPQSKILVCAPINSTCDVLTRSLKIDIPASDIF 533
>gb|KCW53972.1| hypothetical protein EUGRSUZ_J03176 [Eucalyptus grandis]
Length = 375
Score = 70.1 bits (170), Expect(2) = 1e-21
Identities = 37/93 (39%), Positives = 58/93 (62%)
Frame = +2
Query: 71 KRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSLFKFLYPDQTT 250
K +IV F ++FHSQH S+ +Y+++F FN VCLKR QA+E AAT+PS FL+P+
Sbjct: 81 KSSIVLAKFGDEFHSQHHSSSRYNISFSFNRVCLKRAHQAVE-AATDPSFHNFLFPECPV 139
Query: 251 KFTPILPASHIVSHGNFIEK*AFSVKQVFKLEG 349
+ S S+G +E+ +++Q+ L+G
Sbjct: 140 RRDSFALPSFYFSNGVHLEQ-RSAIRQILALKG 171
Score = 60.8 bits (146), Expect(2) = 1e-21
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 19/85 (22%)
Frame = +3
Query: 396 KQLSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPELNIF------- 554
K LSR G +++ + Q+ Q S DSR+L+ AP+N TC+ L R LK KIP+ IF
Sbjct: 170 KGLSRAGVVVREAVWQVYQRSKDSRILVAAPINKTCDALMRSLKDKIPDSEIFRVNAAFR 229
Query: 555 ------------SLCTSESECIVCP 593
L ESEC CP
Sbjct: 230 KIDVVPDDILPSCLYKEESECFACP 254
>ref|XP_012451427.1| PREDICTED: probable RNA helicase SDE3 isoform X2 [Gossypium
raimondii]
Length = 745
Score = 68.9 bits (167), Expect(2) = 7e-21
Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
Frame = +2
Query: 41 GTLDRVMDGDKRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSL 220
G + RV+ K T + V+F E+FHSQH S C+Y+++F FN VCLKR QAI AA + SL
Sbjct: 426 GVIYRVV---KSTSILVEFGEEFHSQHDSTCRYNISFSFNRVCLKRAHQAI--AAVSASL 480
Query: 221 F-KFLYPDQTTKFTPILPASH--IVSHG-NFIEK*AFSVKQVFKLEGGPPYTIEGML 379
KFL+P+ + P+ + + + H N EK A V ++ + G PP+ ++G L
Sbjct: 481 IGKFLFPN-SFSLHPMHNSEYYNLYDHNLNLDEKSA--VHRILNIRGPPPFLVKGPL 534
Score = 59.3 bits (142), Expect(2) = 7e-21
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +3
Query: 396 KQLSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPELNIF 554
+QLSRTG +++ +LQ P S++L+CAP+N TC++LTR LK IP +IF
Sbjct: 547 EQLSRTGLVVKEAVLQTYLRHPQSKILVCAPINRTCDVLTRSLKKDIPASDIF 599
>ref|XP_012451418.1| PREDICTED: probable RNA helicase SDE3 isoform X1 [Gossypium
raimondii] gi|763744944|gb|KJB12383.1| hypothetical
protein B456_002G015200 [Gossypium raimondii]
Length = 745
Score = 68.9 bits (167), Expect(2) = 7e-21
Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
Frame = +2
Query: 41 GTLDRVMDGDKRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSL 220
G + RV+ K T + V+F E+FHSQH S C+Y+++F FN VCLKR QAI AA + SL
Sbjct: 426 GVIYRVV---KSTSILVEFGEEFHSQHDSTCRYNISFSFNRVCLKRAHQAI--AAVSASL 480
Query: 221 F-KFLYPDQTTKFTPILPASH--IVSHG-NFIEK*AFSVKQVFKLEGGPPYTIEGML 379
KFL+P+ + P+ + + + H N EK A V ++ + G PP+ ++G L
Sbjct: 481 IGKFLFPN-SFSLHPMHNSEYYNLYDHNLNLDEKSA--VHRILNIRGPPPFLVKGPL 534
Score = 59.3 bits (142), Expect(2) = 7e-21
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +3
Query: 396 KQLSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPELNIF 554
+QLSRTG +++ +LQ P S++L+CAP+N TC++LTR LK IP +IF
Sbjct: 547 EQLSRTGLVVKEAVLQTYLRHPQSKILVCAPINRTCDVLTRSLKKDIPASDIF 599
>ref|XP_006484508.1| PREDICTED: probable RNA helicase SDE3-like [Citrus sinensis]
Length = 332
Score = 75.9 bits (185), Expect(2) = 9e-21
Identities = 52/126 (41%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Frame = +2
Query: 20 VFHFMN*--GTLDRVMDGDKRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAI 193
+F F N G L RV+ K T V V+F+EDFHSQH+ N KYDV+F FN VCLKR +A+
Sbjct: 14 IFMFANPDQGFLYRVV---KWTTVLVEFEEDFHSQHQPNHKYDVSFSFNRVCLKRAHEAV 70
Query: 194 ETAATNPSLFK-FLYPDQTTKFTPILPASHIVSHGNFIEK*AFSVKQVFKLEGGPPYTIE 370
A + SLF+ +L+PD ++ + P+ S+ +V Q+ EG PY +E
Sbjct: 71 --ADASDSLFRNYLFPDCASRKSIPYPSLCPYSNYKLDSDSNSAVHQILSFEGQSPYLLE 128
Query: 371 GMLTIN 388
G L N
Sbjct: 129 GPLCNN 134
Score = 52.0 bits (123), Expect(2) = 9e-21
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 17/81 (20%)
Frame = +3
Query: 402 LSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPEL------------ 545
LS+TG +++ +LQI + SP SR+L+CAP N TC+ L L IP
Sbjct: 137 LSKTGNVVREAVLQIRRRSPKSRILICAPWNRTCDKLMECLMKDIPASEMFRANAAFREA 196
Query: 546 -----NIFSLCTSESECIVCP 593
IF + E EC CP
Sbjct: 197 DGVSDEIFQVSLVERECFSCP 217
>gb|KDO69868.1| hypothetical protein CISIN_1g002130mg [Citrus sinensis]
Length = 961
Score = 75.5 bits (184), Expect(2) = 1e-20
Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Frame = +2
Query: 41 GTLDRVMDGDKRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSL 220
G L RV+ K T V V+F+EDFHSQH+ N KYDV+F FN VCLKR +A+ A + SL
Sbjct: 652 GFLYRVV---KWTTVLVEFEEDFHSQHQPNHKYDVSFSFNRVCLKRAHEAV--ADASDSL 706
Query: 221 FK-FLYPDQTTKFTPILPASHIVSHGNFIEK*AFSVKQVFKLEGGPPYTIEGMLTIN 388
F+ +L+PD ++ + P+ S+ +V Q+ EG PY +EG L N
Sbjct: 707 FRNYLFPDCASRKSIPYPSLCPYSNYKLDSDSNSAVHQILSFEGQSPYLLEGPLCNN 763
Score = 52.0 bits (123), Expect(2) = 1e-20
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 17/81 (20%)
Frame = +3
Query: 402 LSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPEL------------ 545
LS+TG +++ +LQI + SP SR+L+CAP N TC+ L L IP
Sbjct: 766 LSKTGNVVREAVLQIRRRSPKSRILICAPWNRTCDKLMECLMKDIPASEMFRANAAFREA 825
Query: 546 -----NIFSLCTSESECIVCP 593
IF + E EC CP
Sbjct: 826 DGVSDEIFQVSLVERECFSCP 846
>ref|XP_006437625.1| hypothetical protein CICLE_v10030734mg [Citrus clementina]
gi|557539821|gb|ESR50865.1| hypothetical protein
CICLE_v10030734mg [Citrus clementina]
Length = 802
Score = 75.5 bits (184), Expect(2) = 1e-20
Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Frame = +2
Query: 41 GTLDRVMDGDKRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSL 220
G L RV+ K T V V+F+EDFHSQH+ N KYDV+F FN VCLKR +A+ A + SL
Sbjct: 493 GFLYRVV---KWTTVLVEFEEDFHSQHQPNHKYDVSFSFNRVCLKRAHEAV--ADASDSL 547
Query: 221 FK-FLYPDQTTKFTPILPASHIVSHGNFIEK*AFSVKQVFKLEGGPPYTIEGMLTIN 388
F+ +L+PD ++ + P+ S+ +V Q+ EG PY +EG L N
Sbjct: 548 FRNYLFPDCASRKSIPYPSLCPYSNYKLDSDSNSAVHQILSFEGQSPYLLEGPLCNN 604
Score = 52.0 bits (123), Expect(2) = 1e-20
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 17/81 (20%)
Frame = +3
Query: 402 LSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPEL------------ 545
LS+TG +++ +LQI + SP SR+L+CAP N TC+ L L IP
Sbjct: 607 LSKTGNVVREAVLQIRRRSPKSRILICAPWNRTCDKLMECLMKDIPASEMFRANAAFREA 666
Query: 546 -----NIFSLCTSESECIVCP 593
IF + E EC CP
Sbjct: 667 DGVSDEIFQVSLVERECFSCP 687
>gb|KDO69869.1| hypothetical protein CISIN_1g002130mg [Citrus sinensis]
Length = 651
Score = 75.5 bits (184), Expect(2) = 1e-20
Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Frame = +2
Query: 41 GTLDRVMDGDKRTIVFVDFKEDFHSQHRSNCKYDVNFLFNIVCLKRCLQAIETAATNPSL 220
G L RV+ K T V V+F+EDFHSQH+ N KYDV+F FN VCLKR +A+ A + SL
Sbjct: 342 GFLYRVV---KWTTVLVEFEEDFHSQHQPNHKYDVSFSFNRVCLKRAHEAV--ADASDSL 396
Query: 221 FK-FLYPDQTTKFTPILPASHIVSHGNFIEK*AFSVKQVFKLEGGPPYTIEGMLTIN 388
F+ +L+PD ++ + P+ S+ +V Q+ EG PY +EG L N
Sbjct: 397 FRNYLFPDCASRKSIPYPSLCPYSNYKLDSDSNSAVHQILSFEGQSPYLLEGPLCNN 453
Score = 52.0 bits (123), Expect(2) = 1e-20
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 17/81 (20%)
Frame = +3
Query: 402 LSRTGTLIQRMILQILQASPDSRVLLCAPLNSTCNILTRILKGKIPEL------------ 545
LS+TG +++ +LQI + SP SR+L+CAP N TC+ L L IP
Sbjct: 456 LSKTGNVVREAVLQIRRRSPKSRILICAPWNRTCDKLMECLMKDIPASEMFRANAAFREA 515
Query: 546 -----NIFSLCTSESECIVCP 593
IF + E EC CP
Sbjct: 516 DGVSDEIFQVSLVERECFSCP 536