BLASTX nr result
ID: Aconitum23_contig00020086
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00020086
(338 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein... 105 2e-20
ref|XP_008453742.1| PREDICTED: RNA polymerase-associated protein... 104 2e-20
ref|XP_010241126.1| PREDICTED: RNA polymerase-associated protein... 100 4e-19
ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma ... 99 1e-18
ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 98 2e-18
ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein... 97 5e-18
ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein... 96 1e-17
ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prun... 95 2e-17
ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein... 95 2e-17
ref|XP_009347098.1| PREDICTED: RNA polymerase-associated protein... 95 2e-17
ref|XP_009378467.1| PREDICTED: RNA polymerase-associated protein... 95 2e-17
ref|XP_008382360.1| PREDICTED: RNA polymerase-associated protein... 95 2e-17
gb|KDO47969.1| hypothetical protein CISIN_1g006477mg [Citrus sin... 92 2e-16
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein... 92 2e-16
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr... 92 2e-16
ref|XP_002316628.2| plus-3 domain-containing family protein [Pop... 92 2e-16
ref|XP_011468358.1| PREDICTED: RNA polymerase-associated protein... 91 3e-16
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop... 91 3e-16
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein... 91 3e-16
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta... 91 3e-16
>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
sativus] gi|778690563|ref|XP_011653135.1| PREDICTED: RNA
polymerase-associated protein RTF1 homolog [Cucumis
sativus] gi|700198089|gb|KGN53247.1| hypothetical
protein Csa_4G038650 [Cucumis sativus]
Length = 660
Score = 105 bits (261), Expect = 2e-20
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Frame = -1
Query: 338 VRAKQS-GKKTQVVKETPDTPSSRVRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRK 162
+RAK GK KETP PSSR+RSSAR A++AAAK DALNELRAKRLKQQDPEAHRK
Sbjct: 146 LRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRAAAKDDALNELRAKRLKQQDPEAHRK 205
Query: 161 LIGANRGNSTARDGSPVRKKPVTA 90
L A+RGN+ +R SP ++KP TA
Sbjct: 206 LRDASRGNANSRRFSPTKRKPFTA 229
>ref|XP_008453742.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
melo] gi|659107574|ref|XP_008453743.1| PREDICTED: RNA
polymerase-associated protein RTF1 homolog [Cucumis
melo]
Length = 660
Score = 104 bits (260), Expect = 2e-20
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Frame = -1
Query: 338 VRAKQS-GKKTQVVKETPDTPSSRVRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRK 162
+RAK GK KETP PSSR+RSSAR A++AAAK DALNELRAKRLKQQDPEAHRK
Sbjct: 146 LRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRAAAKDDALNELRAKRLKQQDPEAHRK 205
Query: 161 LIGANRGNSTARDGSPVRKKPVTA 90
L A+RGNS R SP ++KP TA
Sbjct: 206 LRDASRGNSNNRRFSPTKRKPFTA 229
>ref|XP_010241126.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nelumbo
nucifera]
Length = 666
Score = 100 bits (249), Expect = 4e-19
Identities = 52/84 (61%), Positives = 63/84 (75%)
Frame = -1
Query: 338 VRAKQSGKKTQVVKETPDTPSSRVRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRKL 159
VRA+Q GKKT ++KETP PS RVRSS+R+A+K AAK DALNELR KR +QDPE HRKL
Sbjct: 152 VRARQGGKKTDIMKETP--PSVRVRSSSRYADKLAAKDDALNELRNKRRNKQDPEGHRKL 209
Query: 158 IGANRGNSTARDGSPVRKKPVTAA 87
+ RG AR GSPVR++ + A
Sbjct: 210 RDSGRGGLGARGGSPVRRRSILTA 233
>ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma cacao]
gi|590624750|ref|XP_007025692.1| PAF1 complex component
isoform 1 [Theobroma cacao] gi|508781057|gb|EOY28313.1|
PAF1 complex component isoform 1 [Theobroma cacao]
gi|508781058|gb|EOY28314.1| PAF1 complex component
isoform 1 [Theobroma cacao]
Length = 660
Score = 99.0 bits (245), Expect = 1e-18
Identities = 53/82 (64%), Positives = 67/82 (81%), Gaps = 1/82 (1%)
Frame = -1
Query: 329 KQSGKKTQVVKETPDTPSSR-VRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRKLIG 153
+++ + ++ KETP PSSR VRSSAR A++AAAK DALNELRAKRLKQQDPEAHRKL
Sbjct: 150 RENDRPSRSRKETPPLPSSRGVRSSARSADRAAAKDDALNELRAKRLKQQDPEAHRKLRD 209
Query: 152 ANRGNSTARDGSPVRKKPVTAA 87
A+RG+S +R SPV++KP TA+
Sbjct: 210 ASRGSSGSRGLSPVKRKPFTAS 231
>ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
RTF1 homolog [Prunus mume]
Length = 648
Score = 98.2 bits (243), Expect = 2e-18
Identities = 53/77 (68%), Positives = 60/77 (77%)
Frame = -1
Query: 320 GKKTQVVKETPDTPSSRVRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRKLIGANRG 141
GK T KETP PSSRVRSSAR A++AAAK DALNELRAKRLKQQDPEAHRKL A+RG
Sbjct: 144 GKTTHSRKETPPLPSSRVRSSARSADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRG 203
Query: 140 NSTARDGSPVRKKPVTA 90
+S +R S + +K TA
Sbjct: 204 SSGSRSFSHMTRKSFTA 220
>ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Gossypium raimondii] gi|763802543|gb|KJB69481.1|
hypothetical protein B456_011G025800 [Gossypium
raimondii] gi|763802544|gb|KJB69482.1| hypothetical
protein B456_011G025800 [Gossypium raimondii]
gi|763802545|gb|KJB69483.1| hypothetical protein
B456_011G025800 [Gossypium raimondii]
Length = 660
Score = 97.1 bits (240), Expect = 5e-18
Identities = 50/81 (61%), Positives = 64/81 (79%)
Frame = -1
Query: 329 KQSGKKTQVVKETPDTPSSRVRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRKLIGA 150
+++ + ++ +ETP PS VRSSAR A++AAAK DALNELRAKRLKQQDPEAHRKL A
Sbjct: 150 RENDRPSRSQRETPPLPSRGVRSSARSADRAAAKDDALNELRAKRLKQQDPEAHRKLRDA 209
Query: 149 NRGNSTARDGSPVRKKPVTAA 87
+RG+S R SPV++KP TA+
Sbjct: 210 SRGSSGNRGLSPVKRKPFTAS 230
>ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha
curcas] gi|643703874|gb|KDP20938.1| hypothetical protein
JCGZ_21409 [Jatropha curcas]
Length = 658
Score = 95.9 bits (237), Expect = 1e-17
Identities = 54/86 (62%), Positives = 67/86 (77%), Gaps = 2/86 (2%)
Frame = -1
Query: 338 VRAKQSGKK-TQVVKETPDTPSSR-VRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHR 165
+R+K+ ++ T+ KETP PSSR VR+SAR A++AAAK DALNELRAKRLKQQDPEAHR
Sbjct: 146 IRSKRDSERATRSRKETPPLPSSRGVRTSARSADRAAAKDDALNELRAKRLKQQDPEAHR 205
Query: 164 KLIGANRGNSTARDGSPVRKKPVTAA 87
KL +RG S +R SPVR+K T+A
Sbjct: 206 KLRDVSRGTSGSRGVSPVRRKRFTSA 231
>ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
gi|462413781|gb|EMJ18830.1| hypothetical protein
PRUPE_ppa002666mg [Prunus persica]
Length = 646
Score = 95.1 bits (235), Expect = 2e-17
Identities = 52/80 (65%), Positives = 61/80 (76%)
Frame = -1
Query: 329 KQSGKKTQVVKETPDTPSSRVRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRKLIGA 150
K +K + KETP PSSRVRSSAR A++AAAK DALNELRAKRLKQQDPEAHRKL A
Sbjct: 139 KSLKEKFRPKKETPPLPSSRVRSSARSADRAAAKDDALNELRAKRLKQQDPEAHRKLRDA 198
Query: 149 NRGNSTARDGSPVRKKPVTA 90
+RG+S +R S + +K TA
Sbjct: 199 SRGSSGSRSFSHMTRKSFTA 218
>ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Vitis
vinifera]
Length = 658
Score = 94.7 bits (234), Expect = 2e-17
Identities = 53/85 (62%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = -1
Query: 338 VRAKQSGKKTQVVKETPDTPSSR-VRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRK 162
+R+K+ +KTQ KE+P SR VRSSAR A++AAAK DALNELRAKRLK QDPEAHRK
Sbjct: 144 LRSKRGKEKTQSRKESPPLQLSRGVRSSARSADRAAAKDDALNELRAKRLKHQDPEAHRK 203
Query: 161 LIGANRGNSTARDGSPVRKKPVTAA 87
L A+RG S+ R SPV+++ TAA
Sbjct: 204 LRDASRGGSSNRGFSPVKRRAFTAA 228
>ref|XP_009347098.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Pyrus x
bretschneideri]
Length = 657
Score = 94.7 bits (234), Expect = 2e-17
Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Frame = -1
Query: 320 GKKTQVVKETPDTPSSRVRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRKLIGANR- 144
GK Q KETP PSSRVRSSAR A++AAAK DALNELRAKRLKQQDPEAHRKL A+R
Sbjct: 152 GKAPQSRKETPPLPSSRVRSSARSADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRG 211
Query: 143 GNSTARDGSPVRKKPVTA 90
G+S++R S + +K TA
Sbjct: 212 GSSSSRSFSHLNRKSFTA 229
>ref|XP_009378467.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Pyrus x
bretschneideri]
Length = 657
Score = 94.7 bits (234), Expect = 2e-17
Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Frame = -1
Query: 320 GKKTQVVKETPDTPSSRVRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRKLIGANR- 144
GK Q KETP PSSRVRSSAR A++AAAK DALNELRAKRLKQQDPEAHRKL A+R
Sbjct: 152 GKAPQSRKETPPLPSSRVRSSARSADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRG 211
Query: 143 GNSTARDGSPVRKKPVTA 90
G+S++R S + +K TA
Sbjct: 212 GSSSSRSFSHLNRKSFTA 229
>ref|XP_008382360.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Malus
domestica]
Length = 657
Score = 94.7 bits (234), Expect = 2e-17
Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Frame = -1
Query: 320 GKKTQVVKETPDTPSSRVRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRKLIGANR- 144
GK Q KETP PSSRVRSSAR A++AAAK DALNELRAKRLKQQDPEAHRKL A+R
Sbjct: 152 GKAPQSRKETPPLPSSRVRSSARSADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRG 211
Query: 143 GNSTARDGSPVRKKPVTA 90
G+S++R S + +K TA
Sbjct: 212 GSSSSRSFSHLNRKSFTA 229
>gb|KDO47969.1| hypothetical protein CISIN_1g006477mg [Citrus sinensis]
gi|641828832|gb|KDO47970.1| hypothetical protein
CISIN_1g006477mg [Citrus sinensis]
Length = 643
Score = 92.0 bits (227), Expect = 2e-16
Identities = 50/84 (59%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Frame = -1
Query: 335 RAKQSGKKTQVVKETPDTPSSR-VRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRKL 159
R+++ + T+ KETP PSSR R +AR A++AAAK DALNELRAKRLKQQDPEAHR+L
Sbjct: 134 RSRREERSTRSTKETPPLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRL 193
Query: 158 IGANRGNSTARDGSPVRKKPVTAA 87
A+RG S +R SPV++K T A
Sbjct: 194 RDASRGGSGSRVLSPVKRKAFTPA 217
>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
X1 [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
PREDICTED: RNA polymerase-associated protein RTF1
homolog isoform X2 [Citrus sinensis]
Length = 643
Score = 92.0 bits (227), Expect = 2e-16
Identities = 50/84 (59%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Frame = -1
Query: 335 RAKQSGKKTQVVKETPDTPSSR-VRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRKL 159
R+++ + T+ KETP PSSR R +AR A++AAAK DALNELRAKRLKQQDPEAHR+L
Sbjct: 134 RSRREERSTRSTKETPPLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRL 193
Query: 158 IGANRGNSTARDGSPVRKKPVTAA 87
A+RG S +R SPV++K T A
Sbjct: 194 RDASRGGSGSRVLSPVKRKAFTPA 217
>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
gi|557524836|gb|ESR36142.1| hypothetical protein
CICLE_v10028000mg [Citrus clementina]
Length = 643
Score = 92.0 bits (227), Expect = 2e-16
Identities = 50/84 (59%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Frame = -1
Query: 335 RAKQSGKKTQVVKETPDTPSSR-VRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRKL 159
R+++ + T+ KETP PSSR R +AR A++AAAK DALNELRAKRLKQQDPEAHR+L
Sbjct: 134 RSRREERSTRSTKETPPLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRL 193
Query: 158 IGANRGNSTARDGSPVRKKPVTAA 87
A+RG S +R SPV++K T A
Sbjct: 194 RDASRGGSGSRVLSPVKRKAFTPA 217
>ref|XP_002316628.2| plus-3 domain-containing family protein [Populus trichocarpa]
gi|550327599|gb|EEE97240.2| plus-3 domain-containing
family protein [Populus trichocarpa]
Length = 664
Score = 92.0 bits (227), Expect = 2e-16
Identities = 53/86 (61%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Frame = -1
Query: 338 VRAKQSGKK-TQVVKETPDTPSSR-VRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHR 165
+R+K+ K T+ KETP PSSR VRSSAR A++AAAK DALNELRAKRLKQQDPEAHR
Sbjct: 147 IRSKRDNDKPTRSRKETPPLPSSRGVRSSARSADRAAAKDDALNELRAKRLKQQDPEAHR 206
Query: 164 KLIGANRGNSTARDGSPVRKKPVTAA 87
KL A+RG++ +R + V+K T+A
Sbjct: 207 KLRDASRGSAGSRGFAQVKKNNFTSA 232
>ref|XP_011468358.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 625
Score = 91.3 bits (225), Expect = 3e-16
Identities = 50/77 (64%), Positives = 58/77 (75%)
Frame = -1
Query: 320 GKKTQVVKETPDTPSSRVRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRKLIGANRG 141
GK TQ K TP PSSRVRSSAR A++AAAK DALNELRAKRLKQQDPEAHRKL +RG
Sbjct: 152 GKATQSRKVTPPLPSSRVRSSARSADRAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRG 211
Query: 140 NSTARDGSPVRKKPVTA 90
+ +++ S KK +A
Sbjct: 212 SVGSKNFSHTIKKSFSA 228
>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
gi|222848649|gb|EEE86196.1| plus-3 domain-containing
family protein [Populus trichocarpa]
Length = 662
Score = 91.3 bits (225), Expect = 3e-16
Identities = 51/82 (62%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Frame = -1
Query: 329 KQSGKKTQVVKETPDTPSSR-VRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRKLIG 153
+ + K T+ KETP PSSR VRSSAR A++AAAK DALNELRAKRLKQQDPEAHRKL
Sbjct: 151 RDNDKPTRSRKETPPLPSSRGVRSSARSADRAAAKDDALNELRAKRLKQQDPEAHRKLRD 210
Query: 152 ANRGNSTARDGSPVRKKPVTAA 87
+RG++ +R S V+K T+A
Sbjct: 211 VSRGSAGSRGFSQVKKNNFTSA 232
>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 [Fragaria vesca
subsp. vesca]
Length = 657
Score = 91.3 bits (225), Expect = 3e-16
Identities = 50/77 (64%), Positives = 58/77 (75%)
Frame = -1
Query: 320 GKKTQVVKETPDTPSSRVRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRKLIGANRG 141
GK TQ K TP PSSRVRSSAR A++AAAK DALNELRAKRLKQQDPEAHRKL +RG
Sbjct: 152 GKATQSRKVTPPLPSSRVRSSARSADRAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRG 211
Query: 140 NSTARDGSPVRKKPVTA 90
+ +++ S KK +A
Sbjct: 212 SVGSKNFSHTIKKSFSA 228
>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
gi|223541691|gb|EEF43239.1| RNA polymerase-associated
protein RTF1, putative [Ricinus communis]
Length = 660
Score = 90.9 bits (224), Expect = 3e-16
Identities = 49/82 (59%), Positives = 64/82 (78%), Gaps = 1/82 (1%)
Frame = -1
Query: 329 KQSGKKTQVVKETPDTPSSR-VRSSARFAEKAAAKGDALNELRAKRLKQQDPEAHRKLIG 153
++S + T+ KETP PSSR VR+SAR A++AAAK DALNEL+A+RLKQQDPEAHRKL
Sbjct: 150 RESERTTRSRKETPPLPSSRGVRTSARSADRAAAKDDALNELKARRLKQQDPEAHRKLRD 209
Query: 152 ANRGNSTARDGSPVRKKPVTAA 87
A+R S +R SP+++K T+A
Sbjct: 210 ASRRGSGSRGFSPIKRKRFTSA 231