BLASTX nr result

ID: Aconitum23_contig00017564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00017564
         (602 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHN46469.1| Zinc finger CCCH domain-containing protein 46 [Gl...    58   4e-06
ref|XP_003540090.1| PREDICTED: zinc finger CCCH domain-containin...    58   4e-06
ref|XP_010655028.1| PREDICTED: zinc finger CCCH domain-containin...    57   8e-06
emb|CBI38961.3| unnamed protein product [Vitis vinifera]               57   8e-06

>gb|KHN46469.1| Zinc finger CCCH domain-containing protein 46 [Glycine soja]
          Length = 304

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
 Frame = -2

Query: 601 HFGARGLFGKQQHMQSQGNVSPVDIPF--GFGRNLTTPSSNSMQPTNVLSNQAAFSLGQQ 428
           +  + G+FG Q    S    +P+D+    G  +  +T  SNS  PT++        L  Q
Sbjct: 216 NLNSNGVFGVQSGPYS----TPLDLKMFPGSTQETSTAFSNS-GPTSMFQTTPDVQLLSQ 270

Query: 427 TYLEKSQGADGDKSIWLKDKWNPGEIPEEAPP 332
           + +EK      D SIWLK+KWNPGEIPEEAPP
Sbjct: 271 SQVEK---VSVDPSIWLKEKWNPGEIPEEAPP 299


>ref|XP_003540090.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
           [Glycine max] gi|947075170|gb|KRH24010.1| hypothetical
           protein GLYMA_12G016400 [Glycine max]
          Length = 374

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
 Frame = -2

Query: 601 HFGARGLFGKQQHMQSQGNVSPVDIPF--GFGRNLTTPSSNSMQPTNVLSNQAAFSLGQQ 428
           +  + G+FG Q    S    +P+D+    G  +  +T  SNS  PT++        L  Q
Sbjct: 286 NLNSNGVFGVQSGPYS----TPLDLKMFPGSTQETSTAFSNS-GPTSMFQTTPDVQLLSQ 340

Query: 427 TYLEKSQGADGDKSIWLKDKWNPGEIPEEAPP 332
           + +EK      D SIWLK+KWNPGEIPEEAPP
Sbjct: 341 SQVEK---VSVDPSIWLKEKWNPGEIPEEAPP 369


>ref|XP_010655028.1| PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X1
           [Vitis vinifera] gi|731403357|ref|XP_010655029.1|
           PREDICTED: zinc finger CCCH domain-containing protein 16
           isoform X1 [Vitis vinifera]
          Length = 396

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 38/109 (34%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
 Frame = -2

Query: 598 FGARGLFGKQQHMQSQGNVSPVDIPFGFGRNLTTPSSNSMQPTNVLSNQAAFSLGQQ--- 428
           FG  G FG Q  +Q  G+  P +   GF  N  +  S +  P        +F+  Q    
Sbjct: 285 FGNAGSFGSQLPVQMHGSPLPSNTA-GFSHNNMSAGSKAFSPPAASPQIISFANNQSPIL 343

Query: 427 ---------------TYLEKSQ--GADGDKSIWLKDKWNPGEIPEEAPP 332
                            LEK Q     GD SIWLK++WNPGEIPEE PP
Sbjct: 344 SSGTNSMFSAESTMHAQLEKMQRDNFSGDMSIWLKEEWNPGEIPEEEPP 392


>emb|CBI38961.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 38/109 (34%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
 Frame = -2

Query: 598 FGARGLFGKQQHMQSQGNVSPVDIPFGFGRNLTTPSSNSMQPTNVLSNQAAFSLGQQ--- 428
           FG  G FG Q  +Q  G+  P +   GF  N  +  S +  P        +F+  Q    
Sbjct: 283 FGNAGSFGSQLPVQMHGSPLPSNTA-GFSHNNMSAGSKAFSPPAASPQIISFANNQSPIL 341

Query: 427 ---------------TYLEKSQ--GADGDKSIWLKDKWNPGEIPEEAPP 332
                            LEK Q     GD SIWLK++WNPGEIPEE PP
Sbjct: 342 SSGTNSMFSAESTMHAQLEKMQRDNFSGDMSIWLKEEWNPGEIPEEEPP 390


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