BLASTX nr result

ID: Aconitum23_contig00017303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00017303
         (410 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010257408.1| PREDICTED: 30S ribosomal protein 2, chloropl...    67   7e-09
ref|XP_011007362.1| PREDICTED: 30S ribosomal protein 2, chloropl...    58   3e-06
ref|XP_010928836.1| PREDICTED: 30S ribosomal protein 2, chloropl...    56   9e-06
ref|XP_008782883.1| PREDICTED: 30S ribosomal protein 2, chloropl...    56   9e-06

>ref|XP_010257408.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Nelumbo
           nucifera]
          Length = 255

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 44/106 (41%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
 Frame = -2

Query: 304 MAAISSFLTSNVLSKPQPSFKTQ---QLPSKPSFHLPKPSTLRHCNGFSFSPLFLNPKQA 134
           MAAISS L+ NVL  PQPS  T+   Q     S  LPK ++  + +GF+ +   LN +  
Sbjct: 1   MAAISSLLSPNVL--PQPSKSTRALTQFSKLCSLQLPKAASFCNLHGFAATNYHLNRRMT 58

Query: 133 SKLSXXXXXXXXXXXXXA--RRLYVGNIPRNVGNEELKKIFEEHGA 2
            ++S                R+LYVGNIPR V NE+L +IF EHGA
Sbjct: 59  LRISAVAQEVLTQDTPSETARKLYVGNIPRTVNNEQLTQIFSEHGA 104


>ref|XP_011007362.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Populus
           euphratica]
          Length = 255

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 45/107 (42%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
 Frame = -2

Query: 304 MAAISSFLTSNVLSKPQPSFKTQQLPSKPSFHLPKP-STLRHCNGFSFSPLFLNPKQASK 128
           MA ISS LT+ + +  + +  T Q  SKPSF + KP S   H   F+     LN K   +
Sbjct: 1   MATISS-LTTQLPTSTKLALSTNQ--SKPSFQILKPASPFNHFPKFTHLHKILNTKAPQR 57

Query: 127 L-----SXXXXXXXXXXXXXARRLYVGNIPRNVGNEELKKIFEEHGA 2
           L                   ARRLYVGNIPR + NEEL KI EEHGA
Sbjct: 58  LFAVTEETAPAAAVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGA 104


>ref|XP_010928836.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Elaeis
           guineensis]
          Length = 251

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
 Frame = -2

Query: 304 MAAISSFLTSNVLSKPQPSFKTQQLPSKPSFHLPKPSTLRHCNGFSFSPLFLNPKQAS-- 131
           MAAISS L+ N+   P    K +   SKP   L   +T R       S  F NP++ +  
Sbjct: 1   MAAISSCLSPNLCQNP----KDRMTSSKPPAWLAVGATPRSSRALGSSITFSNPRRKTLR 56

Query: 130 -KLSXXXXXXXXXXXXXARRLYVGNIPRNVGNEELKKIFEEHGA 2
                            ARRLYVGNIPR V NE+L K F EHGA
Sbjct: 57  ISAVASEATATAQEPEVARRLYVGNIPRTVDNEQLAKTFGEHGA 100


>ref|XP_008782883.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Phoenix
           dactylifera]
          Length = 251

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 41/104 (39%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
 Frame = -2

Query: 304 MAAISSFLTSNVLSKPQPSFKTQQLPSKPSFHLPKPSTLRHCNGFSFSPLFLNPKQAS-- 131
           MAAISS LT  +   P  S K  + P+     L   ++ R    F  S  F NP++ +  
Sbjct: 1   MAAISSLLTPILYQNPMDSMKISKSPA----WLAIGASPRSSRAFGSSISFSNPRRKTLW 56

Query: 130 -KLSXXXXXXXXXXXXXARRLYVGNIPRNVGNEELKKIFEEHGA 2
                            ARRLYVGNIPR V NEEL KIF EHG+
Sbjct: 57  ISAVASEATATAQEPEVARRLYVGNIPRTVDNEELTKIFGEHGS 100


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