BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00015138
         (583 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I sub...   152   1e-34
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   139   1e-30
gb|AIO05696.1| putative RNA polymerase AI large subunit, partial...   137   3e-30
ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I sub...   136   9e-30
ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I sub...   136   9e-30
ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I sub...   136   9e-30
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              136   9e-30
ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Popu...   135   2e-29
ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I sub...   132   1e-28
ref|XP_010914023.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   130   4e-28
ref|XP_011020318.1| PREDICTED: DNA-directed RNA polymerase I sub...   130   6e-28
ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I sub...   129   1e-27
ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro...   127   3e-27
ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro...   127   3e-27
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...   127   3e-27
ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I sub...   125   2e-26
ref|XP_010546965.1| PREDICTED: DNA-directed RNA polymerase I sub...   125   2e-26
ref|XP_010666878.1| PREDICTED: DNA-directed RNA polymerase I sub...   119   9e-25
ref|XP_010427648.1| PREDICTED: DNA-directed RNA polymerase I sub...   118   2e-24
ref|XP_010516389.1| PREDICTED: DNA-directed RNA polymerase I sub...   117   3e-24

>ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nelumbo
            nucifera]
          Length = 1676

 Score =  152 bits (384), Expect = 1e-34
 Identities = 92/200 (46%), Positives = 122/200 (61%), Gaps = 12/200 (6%)
 Frame = -1

Query: 583  EGKTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPES 404
            +GKTE+DA+RLA  L+KV+VAD+IE MEV VVPF VK+ +VST+YKLK++ Y  E  P  
Sbjct: 1222 KGKTEDDAKRLAAKLQKVTVADVIESMEVGVVPFSVKKHQVSTVYKLKLKLYPPELYPPY 1281

Query: 403  SGIILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEAT--DGPDSG 230
            SGI L+DC+ T+K++FV E+E  I SHL  LSKI GI +++   + N  +    DGP S 
Sbjct: 1282 SGITLKDCQATLKFVFVGEMEDAIQSHLLMLSKIRGITNVVHSTQSNSGDGADEDGPTSK 1341

Query: 229  HKSKQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDGNQN---------TEGEA 77
             ++ +                      QKRKRQ TDEM+YED  +N         ++ EA
Sbjct: 1342 SQAAE-ENDDAGDDDDYEAPDDLGADAQKRKRQATDEMDYEDDMENEIVNTENGRSDIEA 1400

Query: 76   S-GFESEIDRVETEDERGNI 20
            S GFESEID+ E   E GNI
Sbjct: 1401 SAGFESEIDQAEV--EAGNI 1418


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  139 bits (349), Expect = 1e-30
 Identities = 83/195 (42%), Positives = 113/195 (57%), Gaps = 8/195 (4%)
 Frame = -1

Query: 583  EGKTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPES 404
            EG+T EDA+ LA  LRKV+VADI+E MEVSVVPF ++   V  IYKLK++ Y     P+ 
Sbjct: 1210 EGRTNEDADHLADKLRKVTVADIVESMEVSVVPFAIQDGGVCRIYKLKMKLYRPAHYPQY 1269

Query: 403  SGIILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDSGHK 224
            + I +ED EET++ +F++ELE  I +H+  LS+ISGIKD + ++    S   D   +G  
Sbjct: 1270 ANISVEDWEETLEVVFLRELEDAIQNHMFLLSRISGIKDFLPESRSRASGEADEDVAGDM 1329

Query: 223  SKQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDG--NQNTEGEA------SGF 68
            S +                      QKRK Q TDEM+Y+DG   +  EGE+      SGF
Sbjct: 1330 SHREERDDDNDDDDGERADDLGLDAQKRKLQATDEMDYDDGFEEELNEGESTASEEESGF 1389

Query: 67   ESEIDRVETEDERGN 23
            ESEID+ + E E  N
Sbjct: 1390 ESEIDQGDNETEISN 1404


>gb|AIO05696.1| putative RNA polymerase AI large subunit, partial [Cocos nucifera]
          Length = 1669

 Score =  137 bits (346), Expect = 3e-30
 Identities = 79/198 (39%), Positives = 110/198 (55%), Gaps = 14/198 (7%)
 Frame = -1

Query: 583  EGKTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPES 404
            +G+T EDAERLA  LR+V +ADI+E MEV  VPF +   EVSTIYKL++  Y  E  P+ 
Sbjct: 1202 DGRTREDAERLASKLRRVCLADIVESMEVCSVPFCIHGNEVSTIYKLRMNLYPPELYPQH 1261

Query: 403  SGIILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDSGHK 224
            S + LEDC  T++  F+ ++E  I  HL  + KIS I  +  K E N++E TD  + G K
Sbjct: 1262 SDLTLEDCMTTLRTNFIDDMEDAIAKHLDMICKISDINSVTAKGESNLAEGTDEGEHGSK 1321

Query: 223  S-----KQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDG---------NQNTE 86
            S     K                       +KRK++ +DEMEYEDG         +++  
Sbjct: 1322 STHGEDKDNSRGFDDVDDDDGINEDEGMDAEKRKQRASDEMEYEDGIEKESSAKADEHDG 1381

Query: 85   GEASGFESEIDRVETEDE 32
               SGFESEID+VE +++
Sbjct: 1382 DTQSGFESEIDQVEADED 1399


>ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Vitis
            vinifera]
          Length = 1691

 Score =  136 bits (342), Expect = 9e-30
 Identities = 83/188 (44%), Positives = 109/188 (57%), Gaps = 2/188 (1%)
 Frame = -1

Query: 580  GKTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPESS 401
            G++++DAERLA  L+KV+VADI E MEVS+VPF V+  +  +IYKLK++ Y     P  +
Sbjct: 1232 GRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHT 1291

Query: 400  GIILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDSGHKS 221
            GI LEDCEET++ +FV+ELE  I +HL  LSKISGIK+ +  +    S+ TD   SG   
Sbjct: 1292 GISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGDGL 1351

Query: 220  KQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDG-NQNTEGEAS-GFESEIDRV 47
                                    QKRK+Q +DEM+Y D   +  EGE S G   EID V
Sbjct: 1352 AGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGLTEEIDLV 1411

Query: 46   ETEDERGN 23
            E E E  N
Sbjct: 1412 EDEVEISN 1419


>ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Musa
            acuminata subsp. malaccensis]
          Length = 1640

 Score =  136 bits (342), Expect = 9e-30
 Identities = 77/191 (40%), Positives = 108/191 (56%), Gaps = 9/191 (4%)
 Frame = -1

Query: 577  KTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPESSG 398
            KT++DAERLA  LR+VSVAD++E MEV  VPF + R ++STIYKLK+  Y  E  P  S 
Sbjct: 1184 KTKDDAERLAAKLRRVSVADVVERMEVCTVPFSIHRNQISTIYKLKMTLYPSELYPSFSE 1243

Query: 397  IILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDSGHKSK 218
            + LEDC E ++  FV+ +E  I  H+ T+SKIS IK +  K E +  E  D  +S +KS 
Sbjct: 1244 LTLEDCREVLEMTFVEAMEDAIAKHVDTISKISDIKVVSGKEENDFEEGVDEDESRNKSS 1303

Query: 217  QXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDG---------NQNTEGEASGFE 65
                                   ++RK+Q  DE+EY+DG          ++ E   SGFE
Sbjct: 1304 M-EENADGGDEDDESGDDQGIDYKRRKQQANDEVEYDDGIEKESFVAAGEHDEETQSGFE 1362

Query: 64   SEIDRVETEDE 32
            SEID +E +++
Sbjct: 1363 SEIDHLEADED 1373


>ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Phoenix
            dactylifera]
          Length = 1665

 Score =  136 bits (342), Expect = 9e-30
 Identities = 82/198 (41%), Positives = 109/198 (55%), Gaps = 14/198 (7%)
 Frame = -1

Query: 583  EGKTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPES 404
            +G+T EDAERLA  LR+V +ADI+E MEV  VPF +   EVSTIYKLK+  Y  E  P  
Sbjct: 1196 DGRTREDAERLASKLRRVCLADIVESMEVCSVPFCIHGNEVSTIYKLKMNLYPPELYPPH 1255

Query: 403  SGIILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDSGHK 224
            S + LEDC  T++  F+  +E  I  HL  + KIS I  +  K E N++E TD  + G K
Sbjct: 1256 SSLTLEDCMITLRTDFIGAMEDAIAKHLDMICKISDISSVTAKEESNLAEGTDEDEHGSK 1315

Query: 223  S-----KQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDGNQNT--------EG 83
            S     K                       +KRK++ +DEMEYEDG +          +G
Sbjct: 1316 STHGEDKDNSSGFDGVDDDDGINEDEGMDAEKRKKRASDEMEYEDGIEKESSAKADEHDG 1375

Query: 82   EA-SGFESEIDRVETEDE 32
            E  SGFESEID+VE +++
Sbjct: 1376 ETQSGFESEIDQVEADED 1393


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  136 bits (342), Expect = 9e-30
 Identities = 83/188 (44%), Positives = 109/188 (57%), Gaps = 2/188 (1%)
 Frame = -1

Query: 580  GKTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPESS 401
            G++++DAERLA  L+KV+VADI E MEVS+VPF V+  +  +IYKLK++ Y     P  +
Sbjct: 1210 GRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHT 1269

Query: 400  GIILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDSGHKS 221
            GI LEDCEET++ +FV+ELE  I +HL  LSKISGIK+ +  +    S+ TD   SG   
Sbjct: 1270 GISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGDGL 1329

Query: 220  KQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDG-NQNTEGEAS-GFESEIDRV 47
                                    QKRK+Q +DEM+Y D   +  EGE S G   EID V
Sbjct: 1330 AGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGLTEEIDLV 1389

Query: 46   ETEDERGN 23
            E E E  N
Sbjct: 1390 EDEVEISN 1397


>ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa]
            gi|550335519|gb|ERP58815.1| hypothetical protein
            POPTR_0006s05420g [Populus trichocarpa]
          Length = 1132

 Score =  135 bits (340), Expect = 2e-29
 Identities = 77/200 (38%), Positives = 116/200 (58%), Gaps = 10/200 (5%)
 Frame = -1

Query: 583  EGKTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPES 404
            EG+T+EDAERL+  L+KV+VADI+E MEVSV+PF V+ +++  IYKLK++ Y     P+ 
Sbjct: 643  EGRTKEDAERLSDKLKKVTVADIVESMEVSVMPFAVQNDDICRIYKLKMKLYTPAHYPQH 702

Query: 403  SGIILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDSGHK 224
            + I +E+ EET++ LFV+ELE  I ++L  LSKISGIK+ ++++        +   SG+ 
Sbjct: 703  ADISVENWEETLEVLFVRELEDAIQNYLVLLSKISGIKNFLKESHSGTPIEAEEDVSGNI 762

Query: 223  SKQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDGNQNTEGE----------AS 74
            S++                      QKRK+Q TDEM+Y+DG++    E           S
Sbjct: 763  SREGENDDDSDDEEGEEADDLGLDVQKRKQQVTDEMDYDDGSEGVLNEDEGDLSGSQAPS 822

Query: 73   GFESEIDRVETEDERGNIQM 14
            G ES+ +  + E E  N  M
Sbjct: 823  GSESDTEPADKESEISNTDM 842


>ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Elaeis
            guineensis]
          Length = 1674

 Score =  132 bits (333), Expect = 1e-28
 Identities = 79/198 (39%), Positives = 107/198 (54%), Gaps = 14/198 (7%)
 Frame = -1

Query: 583  EGKTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPES 404
            +G+T E AE+LA  LR+V +ADI+E MEV  VPF +   EVSTIYKL++  Y  E  P  
Sbjct: 1206 DGRTREAAEQLASKLRRVCLADIVESMEVCSVPFCIHGNEVSTIYKLRMNLYPPELYPPH 1265

Query: 403  SGIILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDSGHK 224
            S + LEDC  T++  F+  +E  I  HL  + KIS I  +  K E N+ E TD  + G K
Sbjct: 1266 SDLTLEDCMTTLRTYFIDAMEDAIAKHLDMICKISDINSVTAKGESNLEEGTDEDEHGSK 1325

Query: 223  S-----KQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDGNQNT--------EG 83
            S     K                       +KRK++ +DEMEYEDG +          +G
Sbjct: 1326 STHREDKDNSRGFDDVDDDDGINEDEGMDAEKRKKRASDEMEYEDGIEKENSAKADEHDG 1385

Query: 82   EA-SGFESEIDRVETEDE 32
            E  SGFESEID+VE +++
Sbjct: 1386 ETQSGFESEIDQVEADED 1403


>ref|XP_010914023.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I
           subunit RPA1-like [Elaeis guineensis]
          Length = 814

 Score =  130 bits (328), Expect = 4e-28
 Identities = 78/198 (39%), Positives = 106/198 (53%), Gaps = 14/198 (7%)
 Frame = -1

Query: 583 EGKTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPES 404
           +G+T EDAERLA  LR+V +ADI+E MEV  VPF +   EVSTIYKL++  Y  E  P  
Sbjct: 345 DGRTREDAERLASKLRRVCLADIVESMEVCSVPFCIHGNEVSTIYKLRMNLYPPELYPPH 404

Query: 403 SGIILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDSGHK 224
           S + LEDC  T+   F+ ++E  I  HL  + KIS +  +  K E N++E TD  + G K
Sbjct: 405 SDLTLEDCMTTLXTNFIDDMEDAIAKHLDMICKISDVNSVTAKGESNLAEGTDEDEHGRK 464

Query: 223 S-----KQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDGNQNT--------EG 83
           S     K                       +KRK++ +DEME ED  +          +G
Sbjct: 465 STHGEDKDNSRGFDDVDDDDGINEDEGTDAEKRKKRASDEMEXEDDIEKESSAKADKHDG 524

Query: 82  EA-SGFESEIDRVETEDE 32
           E  SGFESEID VE +++
Sbjct: 525 ETQSGFESEIDHVEADED 542


>ref|XP_011020318.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Populus
            euphratica]
          Length = 1699

 Score =  130 bits (326), Expect = 6e-28
 Identities = 79/200 (39%), Positives = 114/200 (57%), Gaps = 10/200 (5%)
 Frame = -1

Query: 583  EGKTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPES 404
            EG+T+EDAERL+  L+KV+VADIIE MEVSV+PF V+ + +  IYKLK++ Y     P+ 
Sbjct: 1211 EGRTKEDAERLSDKLKKVTVADIIESMEVSVMPFAVQNDGICRIYKLKMKLYTPAHYPQH 1270

Query: 403  SGIILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDSGHK 224
            + I +E+ EET++ LFV+ELE  I +HL  LSKISGIK+ ++++        +   SG+ 
Sbjct: 1271 ADISVENWEETLEVLFVRELEDAIQNHLVLLSKISGIKNFLKESHSGTPIEAEEDVSGNI 1330

Query: 223  SKQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDGNQNTEGE----------AS 74
            S +                      QKRK+Q TDEM+Y+DG++    E           S
Sbjct: 1331 SHE-GENDDDSDDEGEEADDLGLDVQKRKQQVTDEMDYDDGSEGLLNEDEGDLSGSQAPS 1389

Query: 73   GFESEIDRVETEDERGNIQM 14
            G ES+ +  + E E  N  M
Sbjct: 1390 GSESDTEPADKESEISNTGM 1409


>ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Musa
            acuminata subsp. malaccensis]
          Length = 1641

 Score =  129 bits (324), Expect = 1e-27
 Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 9/191 (4%)
 Frame = -1

Query: 577  KTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPESSG 398
            KT++DAERLA  LR+VS+AD++E MEV  VPF +   ++STIYKLK+  Y  E  P  S 
Sbjct: 1180 KTKDDAERLAAKLRRVSLADVVERMEVCTVPFSIHGNQISTIYKLKMTLYPSELYPAFSE 1239

Query: 397  IILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDSGHKSK 218
            + LEDC+E ++  FV+ +E  I  HL  + +IS IK    K + +  E  D  +S +KS 
Sbjct: 1240 LTLEDCKEVLETTFVEAMEDAIAKHLDMIFRISDIKVASGKEDNDFEEGVDEDESRNKSN 1299

Query: 217  QXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDG---------NQNTEGEASGFE 65
                                  +++RK+Q  DE+EY+DG          ++ E   SGFE
Sbjct: 1300 TVEENVDGGDEDYESLDDQGTDSRRRKQQANDEVEYDDGIEKESFVAAGEHDEEMQSGFE 1359

Query: 64   SEIDRVETEDE 32
            SEID VE +++
Sbjct: 1360 SEIDHVEADED 1370


>ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
            gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1
            isoform 4 [Theobroma cacao]
          Length = 1397

 Score =  127 bits (320), Expect = 3e-27
 Identities = 79/196 (40%), Positives = 111/196 (56%), Gaps = 6/196 (3%)
 Frame = -1

Query: 583  EGKTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPES 404
            +GKT+EDA  LA  ++K++VADI+E MEVSV PF V   ++ +IYKLK+     +K  E+
Sbjct: 929  KGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFEN 988

Query: 403  SGIILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDS--- 233
            S I ++DCE  +K +F++ELE  I +HL  LSKISGIK  +  ++ N S   D   S   
Sbjct: 989  SDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGR 1048

Query: 232  GHKSKQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDGN---QNTEGEASGFES 62
              ++K                       QK+K+Q TDEM+YED +   QN     +  ES
Sbjct: 1049 SRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEGASLAALES 1108

Query: 61   EIDRVETEDERGNIQM 14
            EID   +EDE G IQ+
Sbjct: 1109 EIDM--SEDETGTIQI 1122


>ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
            gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1
            isoform 3 [Theobroma cacao]
          Length = 1400

 Score =  127 bits (320), Expect = 3e-27
 Identities = 79/196 (40%), Positives = 111/196 (56%), Gaps = 6/196 (3%)
 Frame = -1

Query: 583  EGKTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPES 404
            +GKT+EDA  LA  ++K++VADI+E MEVSV PF V   ++ +IYKLK+     +K  E+
Sbjct: 932  KGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFEN 991

Query: 403  SGIILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDS--- 233
            S I ++DCE  +K +F++ELE  I +HL  LSKISGIK  +  ++ N S   D   S   
Sbjct: 992  SDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGR 1051

Query: 232  GHKSKQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDGN---QNTEGEASGFES 62
              ++K                       QK+K+Q TDEM+YED +   QN     +  ES
Sbjct: 1052 SRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEGASLAALES 1111

Query: 61   EIDRVETEDERGNIQM 14
            EID   +EDE G IQ+
Sbjct: 1112 EIDM--SEDETGTIQI 1125


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  127 bits (320), Expect = 3e-27
 Identities = 79/196 (40%), Positives = 111/196 (56%), Gaps = 6/196 (3%)
 Frame = -1

Query: 583  EGKTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPES 404
            +GKT+EDA  LA  ++K++VADI+E MEVSV PF V   ++ +IYKLK+     +K  E+
Sbjct: 1221 KGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFEN 1280

Query: 403  SGIILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDS--- 233
            S I ++DCE  +K +F++ELE  I +HL  LSKISGIK  +  ++ N S   D   S   
Sbjct: 1281 SDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGR 1340

Query: 232  GHKSKQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDGN---QNTEGEASGFES 62
              ++K                       QK+K+Q TDEM+YED +   QN     +  ES
Sbjct: 1341 SRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEGASLAALES 1400

Query: 61   EIDRVETEDERGNIQM 14
            EID   +EDE G IQ+
Sbjct: 1401 EIDM--SEDETGTIQI 1414


>ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Gossypium
            raimondii] gi|763751831|gb|KJB19219.1| hypothetical
            protein B456_003G089300 [Gossypium raimondii]
          Length = 1674

 Score =  125 bits (313), Expect = 2e-26
 Identities = 72/192 (37%), Positives = 113/192 (58%), Gaps = 3/192 (1%)
 Frame = -1

Query: 583  EGKTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPES 404
            +GKT+EDA RLA  ++K++VA+I+E M VSV PF +   ++ +IYKLK++     +  ++
Sbjct: 1211 KGKTKEDALRLADKMKKITVAEILESMGVSVTPFAIHNGDICSIYKLKMRLGKPGRYLKN 1270

Query: 403  SGIILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDSGHK 224
            S I + DC+  ++ +F++ELE  I +HL  LS+ISGIK+ +  + PN S  TD  +   +
Sbjct: 1271 SDITVTDCQHILEVVFLRELEDAIQNHLVLLSRISGIKNFMPDSRPNASSETD--EDVPE 1328

Query: 223  SKQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDGNQNTEGEA---SGFESEID 53
            S+                       QK+K+Q TDEM+YEDG++  + E    +G ESE D
Sbjct: 1329 SRSHETENDDDTDDEGRAEDLGLDAQKQKQQATDEMDYEDGSEEEQNEGASLAGLESEND 1388

Query: 52   RVETEDERGNIQ 17
               +EDE G I+
Sbjct: 1389 M--SEDENGTIE 1398


>ref|XP_010546965.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Tarenaya
            hassleriana]
          Length = 1671

 Score =  125 bits (313), Expect = 2e-26
 Identities = 73/187 (39%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
 Frame = -1

Query: 583  EGKTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPES 404
            +GKT++DA  +A  LRK++VADIIE MEVSVVPF +  +E+ +I+KLK++ Y  E  P++
Sbjct: 1216 KGKTKDDANDIADKLRKITVADIIEGMEVSVVPFTILEKELCSIHKLKMKLYKPEHYPKN 1275

Query: 403  SGIILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDSGHK 224
            +GI  +D EET+  +F++ LE  I +H+  LSK+SGIK+ +++     S+A +G D G  
Sbjct: 1276 TGITAKDWEETLTVVFLRALEDAIQNHIVLLSKMSGIKNFVEETP---SKAGNGEDDGDG 1332

Query: 223  S--KQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDGNQNTEGEASGFES-EID 53
            S  ++                      QKRK+Q TDEM+YE+ +   + E S     E  
Sbjct: 1333 SVAQKQVREDEDEDAEGQDIDDLGSDAQKRKKQATDEMDYEESSDEEKNEPSSVSGIEDP 1392

Query: 52   RVETEDE 32
             V+ EDE
Sbjct: 1393 EVDNEDE 1399


>ref|XP_010666878.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Beta vulgaris
            subsp. vulgaris] gi|870842325|gb|KMS95772.1| hypothetical
            protein BVRB_005160 [Beta vulgaris subsp. vulgaris]
          Length = 1702

 Score =  119 bits (299), Expect = 9e-25
 Identities = 70/184 (38%), Positives = 103/184 (55%), Gaps = 2/184 (1%)
 Frame = -1

Query: 577  KTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPESSG 398
            K ++DAE+LA  L++V VAD+IE++EVS+VPF +++ E+ +IYKLK++ Y  E  P  + 
Sbjct: 1240 KAKDDAEQLAAKLKRVVVADLIENLEVSIVPFAIEKHEICSIYKLKIKLYAPELYPSHTD 1299

Query: 397  IILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDSGHK-- 224
            I LEDC  T+   +++ELE  I SHL  LS+I GIK     A P  S+  +G DSG K  
Sbjct: 1300 ITLEDCHNTLLNEYLKELEAAIKSHLLLLSRICGIK---SDALPKGSDGMNGDDSGSKTR 1356

Query: 223  SKQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDGNQNTEGEASGFESEIDRVE 44
            S+                       QKRK++ TDE++YED ++    E          VE
Sbjct: 1357 SENDEDDDDDDDDDDEGADDFGSNAQKRKQRVTDEVDYEDDSEEEVEEGKLVAEGEHEVE 1416

Query: 43   TEDE 32
             ++E
Sbjct: 1417 LDEE 1420


>ref|XP_010427648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Camelina
            sativa]
          Length = 1662

 Score =  118 bits (296), Expect = 2e-24
 Identities = 69/189 (36%), Positives = 104/189 (55%), Gaps = 1/189 (0%)
 Frame = -1

Query: 583  EGKTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPES 404
            +GKT+EDA  +   LRK++VADII+ ME+SVVP+ V + EV +I+KLK+  Y  E  P+ 
Sbjct: 1208 KGKTKEDASHITDKLRKITVADIIKSMELSVVPYTVHKNEVCSIHKLKINLYKPEHYPKH 1267

Query: 403  SGIILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDSGHK 224
            + I  ED EET+  +F+++LE  I  H+  L++I GI++ ++   P+    TD  DS   
Sbjct: 1268 TDITEEDWEETMTAVFLRKLEDAIEIHMKMLNRIRGIRNFVEDTSPSAGNETDNDDS-VS 1326

Query: 223  SKQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDGNQNTEGEASGFES-EIDRV 47
             KQ                      QKRK+Q  DEM+YE+ + N   E S     E   +
Sbjct: 1327 GKQ--TEDDDDDGEGTEVDDLGSDAQKRKKQAIDEMDYEENSDNETNEPSSISGVEDPEM 1384

Query: 46   ETEDERGNI 20
            ++EDE   +
Sbjct: 1385 DSEDEDAEV 1393


>ref|XP_010516389.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Camelina
            sativa]
          Length = 1662

 Score =  117 bits (294), Expect = 3e-24
 Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 1/189 (0%)
 Frame = -1

Query: 583  EGKTEEDAERLAGTLRKVSVADIIEHMEVSVVPFYVKREEVSTIYKLKVQFYCQEKIPES 404
            +GKT+EDA  +   LRK++VADII+ ME+S+VP+ V   EV +I+KLK+  Y  E  P+ 
Sbjct: 1208 KGKTKEDASHITDKLRKITVADIIKSMELSIVPYAVHENEVCSIHKLKINLYKPEHYPKH 1267

Query: 403  SGIILEDCEETIKYLFVQELEREIHSHLTTLSKISGIKDIIQKAEPNISEATDGPDSGHK 224
            + I  ED EET+  +F+++LE  I  H+  L +I GI+D ++   P     TD  DS   
Sbjct: 1268 TDITEEDWEETMTAVFLRKLEDAIDIHMKMLHRIRGIRDFVEDTSPTAGNETDNDDS-VS 1326

Query: 223  SKQXXXXXXXXXXXXXXXXXXXXXTQKRKRQHTDEMEYEDGNQNTEGEASGFES-EIDRV 47
             KQ                      QKRK+Q  DEM+YE+ + N   E S     E   +
Sbjct: 1327 GKQ--TEDDDDDGEGTEVDDLGSDAQKRKKQAIDEMDYEENSDNETNEPSSISGVEDPEM 1384

Query: 46   ETEDERGNI 20
            ++EDE   +
Sbjct: 1385 DSEDEDAEV 1393