BLASTX nr result
ID: Aconitum23_contig00013618
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00013618
(644 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KHG01943.1| Serine/arginine-rich splicing factor 4 [Gossypium... 76 2e-16
gb|KHG01944.1| Serine/arginine-rich splicing factor 6 [Gossypium... 76 2e-16
gb|KHF97435.1| Serine/arginine-rich splicing factor 4 [Gossypium... 79 2e-12
gb|EMS67637.1| Neurofilament heavy polypeptide [Triticum urartu] 78 5e-12
gb|AGE46115.1| arginine/serine-rich splicing factor RS2Z34 trans... 75 2e-11
emb|CBI32650.3| unnamed protein product [Vitis vinifera] 74 9e-11
gb|KNA06746.1| hypothetical protein SOVF_178190 isoform C [Spina... 73 2e-10
gb|KNA06745.1| hypothetical protein SOVF_178190 isoform B [Spina... 73 2e-10
ref|XP_007027153.1| RNA-binding family protein with retrovirus z... 67 7e-09
gb|AGE46053.1| arginine/serine-rich splicing factor RS2Z37B tran... 59 1e-08
gb|AGE46057.1| arginine/serine-rich splicing factor RS2Z35 trans... 59 1e-08
gb|AGE46058.1| arginine/serine-rich splicing factor RS2Z35 trans... 59 1e-08
gb|AFW74823.1| hypothetical protein ZEAMMB73_961242, partial [Ze... 59 1e-08
gb|KHG18036.1| Serine/arginine-rich splicing factor 4 [Gossypium... 60 1e-08
gb|AGE46113.1| arginine/serine-rich splicing factor RS2Z35 trans... 58 2e-08
ref|XP_010230323.1| PREDICTED: serine/arginine-rich splicing fac... 65 3e-08
ref|XP_003567963.1| PREDICTED: serine/arginine-rich splicing fac... 65 3e-08
gb|EEE53899.1| hypothetical protein OsJ_00434 [Oryza sativa Japo... 65 4e-08
emb|CDM82006.1| unnamed protein product [Triticum aestivum] 64 8e-08
ref|XP_006643769.1| PREDICTED: serine/arginine-rich splicing fac... 63 2e-07
>gb|KHG01943.1| Serine/arginine-rich splicing factor 4 [Gossypium arboreum]
Length = 286
Score = 76.3 bits (186), Expect(2) = 2e-16
Identities = 44/79 (55%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Frame = -2
Query: 397 MPRYDERDRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGRFLGFCLTWSLWWEGA-IGGF 221
M RYD+R H TRLYVG + RTR+RDL+ +FSRYGRFLGFC TW G +GG
Sbjct: 1 MRRYDDRYCH----TRLYVGRISSRTRTRDLERLFSRYGRFLGFCQTWRPVVRGVDLGGI 56
Query: 220 GGYSCS-YRGLLANLCIML 167
GG SC YR LA L + L
Sbjct: 57 GGNSCPVYRDPLAILSVYL 75
Score = 37.0 bits (84), Expect(2) = 2e-16
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = -1
Query: 86 YLSLDGLGLTVCGNRFRRVRDVDLKHDF 3
YL+ DGL +V GNRFRR+ DVD+K D+
Sbjct: 74 YLTTDGL--SVSGNRFRRILDVDMKRDY 99
>gb|KHG01944.1| Serine/arginine-rich splicing factor 6 [Gossypium arboreum]
Length = 254
Score = 76.3 bits (186), Expect(2) = 2e-16
Identities = 44/79 (55%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Frame = -2
Query: 397 MPRYDERDRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGRFLGFCLTWSLWWEGA-IGGF 221
M RYD+R H TRLYVG + RTR+RDL+ +FSRYGRFLGFC TW G +GG
Sbjct: 1 MRRYDDRYCH----TRLYVGRISSRTRTRDLERLFSRYGRFLGFCQTWRPVVRGVDLGGI 56
Query: 220 GGYSCS-YRGLLANLCIML 167
GG SC YR LA L + L
Sbjct: 57 GGNSCPVYRDPLAILSVYL 75
Score = 37.0 bits (84), Expect(2) = 2e-16
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = -1
Query: 86 YLSLDGLGLTVCGNRFRRVRDVDLKHDF 3
YL+ DGL +V GNRFRR+ DVD+K D+
Sbjct: 74 YLTTDGL--SVSGNRFRRILDVDMKRDY 99
>gb|KHF97435.1| Serine/arginine-rich splicing factor 4 [Gossypium arboreum]
Length = 319
Score = 79.0 bits (193), Expect = 2e-12
Identities = 43/82 (52%), Positives = 48/82 (58%), Gaps = 17/82 (20%)
Frame = -2
Query: 397 MPRYDERDRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGR-----------------FLG 269
MPRYD+R G+ TRLYVGHL RTRSRDL+D+FSRYGR LG
Sbjct: 1 MPRYDDR---RGSGTRLYVGHLSSRTRSRDLEDMFSRYGRCSDDEVGRNRALAKPLWSLG 57
Query: 268 FCLTWSLWWEGAIGGFGGYSCS 203
FCLTW G GGFG + CS
Sbjct: 58 FCLTWRSMVRGCHGGFGEFFCS 79
>gb|EMS67637.1| Neurofilament heavy polypeptide [Triticum urartu]
Length = 431
Score = 77.8 bits (190), Expect = 5e-12
Identities = 43/87 (49%), Positives = 50/87 (57%), Gaps = 23/87 (26%)
Frame = -2
Query: 400 KMPRYDERDRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGR------FLGFCLTWSL--- 248
+MPRYDERDR+ GN TRLYVG L RTR+RDL+D+F RYGR F +L
Sbjct: 25 RMPRYDERDRYGGN-TRLYVGRLPSRTRTRDLEDLFGRYGRAEIETHLFNFLHPMALVID 83
Query: 247 --------------WWEGAIGGFGGYS 209
WWEGA+GG GGYS
Sbjct: 84 MVLGAYPTSVSMVDWWEGALGGIGGYS 110
>gb|AGE46115.1| arginine/serine-rich splicing factor RS2Z34 transcript II [Sorghum
bicolor] gi|448878306|gb|AGE46116.1|
arginine/serine-rich splicing factor RS2Z34 transcript
III [Sorghum bicolor] gi|448878308|gb|AGE46117.1|
arginine/serine-rich splicing factor RS2Z34 transcript
IV [Sorghum bicolor]
Length = 94
Score = 75.5 bits (184), Expect = 2e-11
Identities = 39/79 (49%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Frame = -2
Query: 397 MPRYDER---------DRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGRFLGFCLTWSLW 245
MPRYD+R D G NTRLYVG + RTR+RDL+D+F RYGRF G W
Sbjct: 1 MPRYDDRYNDRYDDRYDDRYGGNTRLYVGRVSSRTRTRDLEDLFGRYGRFWGLTQPRCPW 60
Query: 244 WEGAIGGFGGYSCSYRGLL 188
WEGA+G G S LL
Sbjct: 61 WEGALGAIAGCSPKVETLL 79
>emb|CBI32650.3| unnamed protein product [Vitis vinifera]
Length = 60
Score = 73.6 bits (179), Expect = 9e-11
Identities = 36/59 (61%), Positives = 41/59 (69%), Gaps = 6/59 (10%)
Frame = -2
Query: 397 MPRYDERDRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGRFLGFCLTWSL------WWE 239
MPRYD+R NTRLYVG L RTR+RDL+ +FSRYGRFLGFCLTW WW+
Sbjct: 1 MPRYDDRY----GNTRLYVGRLSSRTRTRDLESLFSRYGRFLGFCLTWRSMVGGWNWWK 55
>gb|KNA06746.1| hypothetical protein SOVF_178190 isoform C [Spinacia oleracea]
Length = 249
Score = 72.8 bits (177), Expect = 2e-10
Identities = 39/69 (56%), Positives = 45/69 (65%), Gaps = 6/69 (8%)
Frame = -2
Query: 397 MPRYDER------DRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGRFLGFCLTWSLWWEG 236
MPRY +R DRH G+ TRLYVG L RTR+ DLDD+FSRYGRFLGFCL ++
Sbjct: 1 MPRYGDRGDRGDRDRH-GSGTRLYVGRLSSRTRTHDLDDLFSRYGRFLGFCLALEVYGGM 59
Query: 235 AIGGFGGYS 209
G GG S
Sbjct: 60 VALGIGGQS 68
>gb|KNA06745.1| hypothetical protein SOVF_178190 isoform B [Spinacia oleracea]
Length = 248
Score = 72.8 bits (177), Expect = 2e-10
Identities = 39/69 (56%), Positives = 45/69 (65%), Gaps = 6/69 (8%)
Frame = -2
Query: 397 MPRYDER------DRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGRFLGFCLTWSLWWEG 236
MPRY +R DRH G+ TRLYVG L RTR+ DLDD+FSRYGRFLGFCL ++
Sbjct: 1 MPRYGDRGDRGDRDRH-GSGTRLYVGRLSSRTRTHDLDDLFSRYGRFLGFCLALEVYGGM 59
Query: 235 AIGGFGGYS 209
G GG S
Sbjct: 60 VALGIGGQS 68
>ref|XP_007027153.1| RNA-binding family protein with retrovirus zinc finger-like domain,
putative [Theobroma cacao] gi|508715758|gb|EOY07655.1|
RNA-binding family protein with retrovirus zinc
finger-like domain, putative [Theobroma cacao]
Length = 312
Score = 67.4 bits (163), Expect = 7e-09
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = -2
Query: 397 MPRYDERDRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGRFLGFCLTW 254
MPR+D R TRLYVG L RTR+RDL+ +FSRYGRFLGFCLTW
Sbjct: 1 MPRFDGRY----GTTRLYVGRLSSRTRARDLEHIFSRYGRFLGFCLTW 44
>gb|AGE46053.1| arginine/serine-rich splicing factor RS2Z37B transcript II [Zea
mays] gi|448878182|gb|AGE46054.1| arginine/serine-rich
splicing factor RS2Z37B transcript III [Zea mays]
Length = 58
Score = 58.9 bits (141), Expect(2) = 1e-08
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = -2
Query: 397 MPRYDERDRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGRFLGF 266
MPRYD DR+ G TRLYVG L PRTRSRDL+ +F +YGRF GF
Sbjct: 1 MPRYD--DRYGG--TRLYVGRLAPRTRSRDLEYLFGKYGRFFGF 40
Score = 28.1 bits (61), Expect(2) = 1e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -3
Query: 252 VYGGRVPLVDLVAI 211
V+GGRVPLVDLV I
Sbjct: 44 VFGGRVPLVDLVTI 57
>gb|AGE46057.1| arginine/serine-rich splicing factor RS2Z35 transcript II [Zea
mays]
Length = 73
Score = 58.5 bits (140), Expect(2) = 1e-08
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = -2
Query: 397 MPRYDERDRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGRFLGF 266
MPRYD DRH NTRLYVG L PRTRSRDL+ +FS+YGRF F
Sbjct: 1 MPRYD--DRHG--NTRLYVGRLAPRTRSRDLEYLFSKYGRFSVF 40
Score = 28.5 bits (62), Expect(2) = 1e-08
Identities = 15/22 (68%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -3
Query: 252 VYGGRVPLVDLVAI-PAVIGDF 190
V GGRVPLV+LVAI P + DF
Sbjct: 46 VCGGRVPLVELVAIVPIFVEDF 67
>gb|AGE46058.1| arginine/serine-rich splicing factor RS2Z35 transcript III [Zea
mays]
Length = 81
Score = 58.5 bits (140), Expect(2) = 1e-08
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = -2
Query: 397 MPRYDERDRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGRFLGF 266
MPRYD DRH NTRLYVG L PRTRSRDL+ +FS+YGRF F
Sbjct: 1 MPRYD--DRHG--NTRLYVGRLAPRTRSRDLEYLFSKYGRFSVF 40
Score = 28.5 bits (62), Expect(2) = 1e-08
Identities = 15/22 (68%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -3
Query: 252 VYGGRVPLVDLVAI-PAVIGDF 190
V GGRVPLV+LVAI P + DF
Sbjct: 46 VCGGRVPLVELVAIVPIFVEDF 67
>gb|AFW74823.1| hypothetical protein ZEAMMB73_961242, partial [Zea mays]
Length = 124
Score = 58.5 bits (140), Expect(2) = 1e-08
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = -2
Query: 397 MPRYDERDRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGRFLGF 266
MPRYD DRH NTRLYVG L PRTRSRDL+ +FS+YGRF F
Sbjct: 44 MPRYD--DRHG--NTRLYVGRLAPRTRSRDLEYLFSKYGRFSVF 83
Score = 28.5 bits (62), Expect(2) = 1e-08
Identities = 15/22 (68%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -3
Query: 252 VYGGRVPLVDLVAI-PAVIGDF 190
V GGRVPLV+LVAI P + DF
Sbjct: 89 VCGGRVPLVELVAIVPIFVEDF 110
>gb|KHG18036.1| Serine/arginine-rich splicing factor 4 [Gossypium arboreum]
Length = 327
Score = 60.1 bits (144), Expect(2) = 1e-08
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -2
Query: 397 MPRYDERDRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGRF 275
MPRYD DR G TRLYVGHL RTRSRDL+D+FSRYGRF
Sbjct: 1 MPRYD--DRRGG--TRLYVGHLSSRTRSRDLEDMFSRYGRF 37
Score = 26.6 bits (57), Expect(2) = 1e-08
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 285 MEGFWAFA*PGVYGGRVPLVDLVAIPAVI 199
+EG W VYG RV LVDL + V+
Sbjct: 75 VEGCWLLPNLEVYGERVTLVDLACLSIVL 103
>gb|AGE46113.1| arginine/serine-rich splicing factor RS2Z35 transcript II [Sorghum
bicolor]
Length = 81
Score = 57.8 bits (138), Expect(2) = 2e-08
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = -2
Query: 397 MPRYDERDRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGRFLGFCLT 257
MPRYD+R NTRLYVG L PRTRSRDL+ +FS+YGRF F T
Sbjct: 1 MPRYDDRY----GNTRLYVGRLAPRTRSRDLEYLFSKYGRFSVFYTT 43
Score = 28.5 bits (62), Expect(2) = 2e-08
Identities = 15/22 (68%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -3
Query: 252 VYGGRVPLVDLVAI-PAVIGDF 190
V GGRVPLV+LVAI P + DF
Sbjct: 46 VCGGRVPLVELVAIVPKFVEDF 67
>ref|XP_010230323.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
X1 [Brachypodium distachyon]
Length = 320
Score = 65.5 bits (158), Expect = 3e-08
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = -2
Query: 397 MPRYDERDRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGR 278
MPRYDERDR+ GN TRLYVG L RTRSRDL+D+F RYGR
Sbjct: 1 MPRYDERDRYGGN-TRLYVGRLSSRTRSRDLEDLFGRYGR 39
>ref|XP_003567963.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
X2 [Brachypodium distachyon] gi|944066769|gb|KQK02253.1|
hypothetical protein BRADI_2g00370 [Brachypodium
distachyon]
Length = 319
Score = 65.5 bits (158), Expect = 3e-08
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = -2
Query: 397 MPRYDERDRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGR 278
MPRYDERDR+ GN TRLYVG L RTRSRDL+D+F RYGR
Sbjct: 1 MPRYDERDRYGGN-TRLYVGRLSSRTRSRDLEDLFGRYGR 39
>gb|EEE53899.1| hypothetical protein OsJ_00434 [Oryza sativa Japonica Group]
Length = 377
Score = 64.7 bits (156), Expect = 4e-08
Identities = 30/45 (66%), Positives = 36/45 (80%), Gaps = 3/45 (6%)
Frame = -2
Query: 403 WKMPRYDERDRHS---GNNTRLYVGHLHPRTRSRDLDDVFSRYGR 278
+KMPRYD+RDR+ G NTRLYVG L RTR+RDL+D+F RYGR
Sbjct: 52 FKMPRYDDRDRYDDRYGGNTRLYVGRLSSRTRTRDLEDLFGRYGR 96
>emb|CDM82006.1| unnamed protein product [Triticum aestivum]
Length = 323
Score = 63.9 bits (154), Expect = 8e-08
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = -2
Query: 397 MPRYDERDRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGR 278
MPRYDERDR+ GN TRLYVG L RTR+RDL+D+F RYGR
Sbjct: 1 MPRYDERDRYGGN-TRLYVGRLPSRTRTRDLEDLFGRYGR 39
>ref|XP_006643769.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like [Oryza
brachyantha]
Length = 325
Score = 62.8 bits (151), Expect = 2e-07
Identities = 29/42 (69%), Positives = 34/42 (80%), Gaps = 2/42 (4%)
Frame = -2
Query: 397 MPRYDER--DRHSGNNTRLYVGHLHPRTRSRDLDDVFSRYGR 278
MPRYD+R DR+ G NTRLYVG L RTR+RDL+D+F RYGR
Sbjct: 1 MPRYDDRYDDRYGGGNTRLYVGRLSSRTRTRDLEDLFGRYGR 42