BLASTX nr result
ID: Aconitum23_contig00012942
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00012942
(889 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAY85235.1| RNA polymerase II second largest subunit, partial... 565 e-158
ref|XP_010242918.1| PREDICTED: DNA-directed RNA polymerase II su... 565 e-158
gb|AAY85223.1| RNA polymerase II second largest subunit, partial... 565 e-158
gb|AAY85216.1| RNA polymerase II second largest subunit, partial... 563 e-158
gb|AAY85208.1| RNA polymerase II second largest subunit, partial... 563 e-158
gb|AAY85206.1| RNA polymerase II second largest subunit, partial... 561 e-157
gb|AAY85204.1| RNA polymerase II second largest subunit, partial... 560 e-157
gb|AAY89340.1| RNA polymerase II second largest subunit [Berberi... 560 e-157
gb|AAY85199.1| RNA polymerase II second largest subunit, partial... 560 e-157
gb|AAZ08462.1| RNA polymerase II second largest subunit [Platanu... 559 e-157
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su... 558 e-156
gb|AAY85236.1| RNA polymerase II second largest subunit, partial... 558 e-156
gb|AAY85203.1| RNA polymerase II second largest subunit, partial... 558 e-156
gb|AAY85190.1| RNA polymerase II second largest subunit, partial... 558 e-156
emb|CDP14782.1| unnamed protein product [Coffea canephora] 555 e-155
gb|AAZ08460.1| RNA polymerase II second largest subunit [Eschsch... 551 e-154
gb|AAZ08461.1| RNA polymerase II second largest subunit [Liriode... 551 e-154
gb|KNA24799.1| hypothetical protein SOVF_012050 [Spinacia oleracea] 548 e-153
ref|XP_010686499.1| PREDICTED: DNA-directed RNA polymerase II su... 548 e-153
gb|AAZ08459.1| RNA polymerase II second largest subunit [Astilbe... 547 e-153
>gb|AAY85235.1| RNA polymerase II second largest subunit, partial [Tetracentron
sinense]
Length = 951
Score = 565 bits (1457), Expect = e-158
Identities = 281/296 (94%), Positives = 286/296 (96%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVRGY QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 297 GPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 356
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG
Sbjct: 357 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 416
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 417 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 476
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
RNP+LLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 477 RNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 536
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DIRALQQRES E+ GWHDLV +GYIEYVD TMISMTINDL+TA+LNPEEAY
Sbjct: 537 DIRALQQRESPEEGGWHDLVAKGYIEYVDTEEEETTMISMTINDLITAKLNPEEAY 592
>ref|XP_010242918.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Nelumbo
nucifera]
Length = 1189
Score = 565 bits (1456), Expect = e-158
Identities = 282/296 (95%), Positives = 286/296 (96%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVR Y QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 399 GPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 458
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG
Sbjct: 459 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 518
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 519 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 578
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 579 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 638
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DIRALQQRES+E+ GWHDLV +G+IEYVD TMISMTINDLVTARLNPEEAY
Sbjct: 639 DIRALQQRESSEEGGWHDLVAKGFIEYVDTEEEETTMISMTINDLVTARLNPEEAY 694
>gb|AAY85223.1| RNA polymerase II second largest subunit, partial [Nelumbo nucifera]
Length = 865
Score = 565 bits (1456), Expect = e-158
Identities = 282/296 (95%), Positives = 286/296 (96%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVR Y QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 289 GPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 348
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG
Sbjct: 349 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 408
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 409 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 468
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 469 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 528
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DIRALQQRES+E+ GWHDLV +G+IEYVD TMISMTINDLVTARLNPEEAY
Sbjct: 529 DIRALQQRESSEEGGWHDLVAKGFIEYVDTEEEETTMISMTINDLVTARLNPEEAY 584
>gb|AAY85216.1| RNA polymerase II second largest subunit, partial [Hibbertia
scandens]
Length = 873
Score = 563 bits (1452), Expect = e-158
Identities = 281/296 (94%), Positives = 285/296 (96%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVR Y QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 297 GPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 356
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTY+STLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG
Sbjct: 357 NAAGTRAGVSQVLNRLTYSSTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 416
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 417 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 476
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
RNP+LLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 477 RNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 536
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DIRALQQRES ED GWHDLV +G+IEYVD TMISMTINDLVTARLNPEEAY
Sbjct: 537 DIRALQQRESPEDGGWHDLVAKGFIEYVDTEEEETTMISMTINDLVTARLNPEEAY 592
>gb|AAY85208.1| RNA polymerase II second largest subunit, partial [Euptelea
polyandra]
Length = 874
Score = 563 bits (1452), Expect = e-158
Identities = 280/296 (94%), Positives = 285/296 (96%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVR Y QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 297 GPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 356
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG
Sbjct: 357 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 416
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 417 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 476
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 477 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 536
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DIRALQQRES +D GWHDLV +G+IEYVD TMISMTINDL+TAR+NPEEAY
Sbjct: 537 DIRALQQRESPDDGGWHDLVAKGFIEYVDTEEEETTMISMTINDLITARINPEEAY 592
>gb|AAY85206.1| RNA polymerase II second largest subunit, partial [Embothrium
coccineum]
Length = 706
Score = 561 bits (1446), Expect = e-157
Identities = 277/296 (93%), Positives = 286/296 (96%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVRGY QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 297 GPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 356
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG
Sbjct: 357 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 416
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 417 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 476
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIV+KQRLLIKKK
Sbjct: 477 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVDKQRLLIKKK 536
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
D+RALQQRES +D GWHDLV +G+IEY+D TMISMTINDL++ARL+PEEAY
Sbjct: 537 DVRALQQRESPDDGGWHDLVAKGFIEYIDTEEEETTMISMTINDLISARLHPEEAY 592
>gb|AAY85204.1| RNA polymerase II second largest subunit, partial [Dillenia
suffruticosa]
Length = 868
Score = 560 bits (1444), Expect = e-157
Identities = 279/296 (94%), Positives = 285/296 (96%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVRGY QKCVDNGKDVNLQFAIKAK ITSGLKYSLATGNWGQA
Sbjct: 292 GPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKPITSGLKYSLATGNWGQA 351
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTY+STLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG
Sbjct: 352 NAAGTRAGVSQVLNRLTYSSTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 411
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 412 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 471
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
RNP+LLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 472 RNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 531
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DIRALQQRES E+ GWHDLV +G+IEYVD TMISMTINDLV+ARLNPEEAY
Sbjct: 532 DIRALQQRESPEEGGWHDLVAKGFIEYVDTEEEETTMISMTINDLVSARLNPEEAY 587
>gb|AAY89340.1| RNA polymerase II second largest subunit [Berberidopsis beckleri]
Length = 873
Score = 560 bits (1442), Expect = e-157
Identities = 278/296 (93%), Positives = 285/296 (96%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVR Y QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 297 GPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 356
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG
Sbjct: 357 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 416
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 417 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 476
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
RNP+LLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 477 RNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 536
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DI+ALQQRES ED GWHDLV +G+IEYVD TMISMTINDL++A+LNPEEAY
Sbjct: 537 DIQALQQRESHEDGGWHDLVAKGFIEYVDTEEEETTMISMTINDLISAKLNPEEAY 592
>gb|AAY85199.1| RNA polymerase II second largest subunit, partial [Cissus tuberosa]
Length = 951
Score = 560 bits (1442), Expect = e-157
Identities = 279/296 (94%), Positives = 285/296 (96%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVR Y QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 297 GPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 356
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG
Sbjct: 357 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 416
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQ+TKIFVNGCWVGIH
Sbjct: 417 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQSTKIFVNGCWVGIH 476
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
RNP+LLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 477 RNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 536
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DIRALQ RES ED GWHDLV++G+IEYVD TMISMTINDLV+ARLNPEEAY
Sbjct: 537 DIRALQLRESPEDGGWHDLVSKGFIEYVDTEEEETTMISMTINDLVSARLNPEEAY 592
>gb|AAZ08462.1| RNA polymerase II second largest subunit [Platanus orientalis]
Length = 923
Score = 559 bits (1441), Expect = e-157
Identities = 279/296 (94%), Positives = 283/296 (95%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVR Y QKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 269 GPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQA 328
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG
Sbjct: 329 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 388
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 389 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 448
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
RNPELLV TLR+LRRQVDVNTEVGVIRDI LKELRLYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 449 RNPELLVNTLRKLRRQVDVNTEVGVIRDIHLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 508
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DIRALQQRE+ ED GWHDLV +GYIEYVD TMISMTINDLVTARLNPEEAY
Sbjct: 509 DIRALQQRETPEDGGWHDLVAKGYIEYVDTEEEETTMISMTINDLVTARLNPEEAY 564
>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
vinifera] gi|147841183|emb|CAN72948.1| hypothetical
protein VITISV_033708 [Vitis vinifera]
gi|302143287|emb|CBI21848.3| unnamed protein product
[Vitis vinifera]
Length = 1193
Score = 558 bits (1438), Expect = e-156
Identities = 277/296 (93%), Positives = 285/296 (96%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVR Y QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 403 GPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 462
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG
Sbjct: 463 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 522
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQ+TKIFVNGCWVGIH
Sbjct: 523 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQSTKIFVNGCWVGIH 582
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
RNP+LLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKK+
Sbjct: 583 RNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKR 642
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DIRALQ RES ED GWHDLV++G+IEYVD TMISMTINDL++ARLNPEEAY
Sbjct: 643 DIRALQLRESPEDGGWHDLVSKGFIEYVDTEEEETTMISMTINDLISARLNPEEAY 698
>gb|AAY85236.1| RNA polymerase II second largest subunit, partial [Vitis piasezkii]
Length = 951
Score = 558 bits (1438), Expect = e-156
Identities = 277/296 (93%), Positives = 285/296 (96%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVR Y QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 297 GPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 356
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG
Sbjct: 357 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 416
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQ+TKIFVNGCWVGIH
Sbjct: 417 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQSTKIFVNGCWVGIH 476
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
RNP+LLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKK+
Sbjct: 477 RNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKR 536
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DIRALQ RES ED GWHDLV++G+IEYVD TMISMTINDL++ARLNPEEAY
Sbjct: 537 DIRALQLRESPEDGGWHDLVSKGFIEYVDTEEEETTMISMTINDLISARLNPEEAY 592
>gb|AAY85203.1| RNA polymerase II second largest subunit, partial [Dicentra formosa]
Length = 873
Score = 558 bits (1438), Expect = e-156
Identities = 278/296 (93%), Positives = 284/296 (95%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVRGY QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 297 GPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 356
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG
Sbjct: 357 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 416
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQ+TKIFVNGCWVGIH
Sbjct: 417 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQSTKIFVNGCWVGIH 476
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
RNPELLVKTLR LRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKK+
Sbjct: 477 RNPELLVKTLRALRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKR 536
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DIRALQ RES ++ GWHDLV +GYIEYVD TMISMTINDLV+ARLNPEEAY
Sbjct: 537 DIRALQLRESPDEGGWHDLVAKGYIEYVDTEEEETTMISMTINDLVSARLNPEEAY 592
>gb|AAY85190.1| RNA polymerase II second largest subunit, partial [Aextoxicon
punctatum]
Length = 873
Score = 558 bits (1438), Expect = e-156
Identities = 278/296 (93%), Positives = 284/296 (95%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVR Y QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 297 GPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 356
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHW MMCPAETPEG
Sbjct: 357 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWXMMCPAETPEG 416
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 417 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 476
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
RNP+LLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 477 RNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 536
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DI+ALQQRES E+ GWHDLV +G+IEYVD TMISMTINDL+TARLNPEEAY
Sbjct: 537 DIQALQQRESHEEGGWHDLVAKGFIEYVDTEEEETTMISMTINDLITARLNPEEAY 592
>emb|CDP14782.1| unnamed protein product [Coffea canephora]
Length = 1201
Score = 555 bits (1431), Expect = e-155
Identities = 275/296 (92%), Positives = 282/296 (95%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVR Y QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 411 GPLLGGLFRMLFRKLTRDVRSYIQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 470
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG
Sbjct: 471 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 531 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 590
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
RNPELLV+TLRQLRRQVDVNTEVGVIRDI LKELRLYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 591 RNPELLVRTLRQLRRQVDVNTEVGVIRDIHLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 650
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DI ALQQRE E+FGWHDL+ +GYIEYVD TMISMTINDL+ +RLNP+EAY
Sbjct: 651 DILALQQREYTEEFGWHDLIAKGYIEYVDTEEEETTMISMTINDLMNSRLNPDEAY 706
>gb|AAZ08460.1| RNA polymerase II second largest subunit [Eschscholzia californica]
Length = 951
Score = 551 bits (1421), Expect = e-154
Identities = 274/296 (92%), Positives = 284/296 (95%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVRGY QKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 297 GPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQA 356
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG
Sbjct: 357 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 416
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAA+PILEFLEEWSTENFEEISPAVIPQ+TKIFVNGCWVGIH
Sbjct: 417 QACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEISPAVIPQSTKIFVNGCWVGIH 476
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
RNPELLVKTLRQLRRQVDVNTEVGVIRDI LKELRLYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 477 RNPELLVKTLRQLRRQVDVNTEVGVIRDIHLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 536
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DI+ALQ RES E+ GWHDLV +G+IEYVD TMISMTINDLV+AR+NP+EAY
Sbjct: 537 DIQALQLRESPEEGGWHDLVAKGFIEYVDTEEEETTMISMTINDLVSARVNPKEAY 592
>gb|AAZ08461.1| RNA polymerase II second largest subunit [Liriodendron tulipifera]
Length = 942
Score = 551 bits (1421), Expect = e-154
Identities = 276/296 (93%), Positives = 285/296 (96%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVRGY QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 289 GPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 348
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG
Sbjct: 349 NAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 408
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 409 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 468
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 469 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 528
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
IR+LQQRE+ +D GWHDLV +G+IEYVD TMISMTI+DLV+ARLNP+EAY
Sbjct: 529 HIRSLQQRET-QDEGWHDLVAKGFIEYVDTEEEETTMISMTISDLVSARLNPDEAY 583
>gb|KNA24799.1| hypothetical protein SOVF_012050 [Spinacia oleracea]
Length = 1193
Score = 548 bits (1412), Expect = e-153
Identities = 271/296 (91%), Positives = 282/296 (95%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVRGY QKCVD+GKD+NL FAIKAKTITSGLKYSLATGNWGQA
Sbjct: 402 GPLLGGLFRMLFRKLTRDVRGYVQKCVDSGKDLNLSFAIKAKTITSGLKYSLATGNWGQA 461
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEG
Sbjct: 462 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 521
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAA PILEFLEEWSTENFEEISPAVIPQ+TKIFVNGCWVGIH
Sbjct: 522 QACGLVKNLALMVYITVGSAAYPILEFLEEWSTENFEEISPAVIPQSTKIFVNGCWVGIH 581
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
R+PELLVKTLRQLRR+VDVNTEVGV+RDIRLKELR+YTDYGRCSRPLFIVEKQ LLIKKK
Sbjct: 582 RDPELLVKTLRQLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQSLLIKKK 641
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DIRALQQRE+ ED GWHDLV +GYIEY+D TMISMTINDLVTAR+NPEEAY
Sbjct: 642 DIRALQQRENPEDGGWHDLVAKGYIEYIDTEEEETTMISMTINDLVTARINPEEAY 697
>ref|XP_010686499.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Beta vulgaris
subsp. vulgaris] gi|870852317|gb|KMT04246.1| hypothetical
protein BVRB_8g183220 [Beta vulgaris subsp. vulgaris]
Length = 1200
Score = 548 bits (1411), Expect = e-153
Identities = 272/296 (91%), Positives = 281/296 (94%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVR Y QKCVD GKD+NL FAIKAKTITSGLKYSLATGNWGQA
Sbjct: 409 GPLLGGLFRMLFRKLTRDVRAYVQKCVDQGKDLNLSFAIKAKTITSGLKYSLATGNWGQA 468
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEG
Sbjct: 469 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 528
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAA PILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 529 QACGLVKNLALMVYITVGSAAYPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 588
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
R+PELLVKTLRQLRR+VDVNTEVGV+RDIRLKELR+YTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 589 RDPELLVKTLRQLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 648
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DIRALQQRES ED GWHDLV +G+IEY+D TMISMTINDLV+ARLNPEEAY
Sbjct: 649 DIRALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMISMTINDLVSARLNPEEAY 704
>gb|AAZ08459.1| RNA polymerase II second largest subunit [Astilbe sp. Yoshikawa s.n.]
Length = 951
Score = 547 bits (1409), Expect = e-153
Identities = 270/296 (91%), Positives = 283/296 (95%)
Frame = -1
Query: 889 GPLLGGLFRMLFRKLTRDVRGYAQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 710
GPLLGGLFRMLFRKLTRDVRGY QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 297 GPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 356
Query: 709 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEG 530
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEG
Sbjct: 357 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 416
Query: 529 QACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIH 350
QACGLVKNLALMVYITVGSAA PILEFLEEW TENFEEISPAVIP+ATKIFVNGCWVGIH
Sbjct: 417 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPEATKIFVNGCWVGIH 476
Query: 349 RNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKK 170
R+P++LVKTLR+LRR+VDVNTEVGV+RDIRLKELR+YTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 477 RDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 536
Query: 169 DIRALQQRESAEDFGWHDLVTRGYIEYVDXXXXXXTMISMTINDLVTARLNPEEAY 2
DI+ALQQRE+ ED GWHDLV +G+IEYVD TMISMTINDLV+ARLNPEEAY
Sbjct: 537 DIQALQQRETPEDGGWHDLVAKGFIEYVDTEEEETTMISMTINDLVSARLNPEEAY 592