BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00012889
         (1088 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010242622.1| PREDICTED: DNA-directed RNA polymerase III s...   516   e-143
ref|XP_010242621.1| PREDICTED: DNA-directed RNA polymerase III s...   516   e-143
emb|CDO98608.1| unnamed protein product [Coffea canephora]            513   e-142
ref|XP_002321356.2| hypothetical protein POPTR_0015s005302g, par...   511   e-142
ref|XP_002321360.2| hypothetical protein POPTR_0015s005302g, par...   511   e-142
ref|XP_011003287.1| PREDICTED: DNA-directed RNA polymerase III s...   508   e-141
ref|XP_011003286.1| PREDICTED: DNA-directed RNA polymerase III s...   508   e-141
ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III s...   507   e-141
ref|XP_012068721.1| PREDICTED: DNA-directed RNA polymerase III s...   502   e-139
ref|XP_011085923.1| PREDICTED: DNA-directed RNA polymerase III s...   502   e-139
ref|XP_012459628.1| PREDICTED: DNA-directed RNA polymerase III s...   495   e-137
gb|KJB75029.1| hypothetical protein B456_012G019600 [Gossypium r...   495   e-137
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...   495   e-137
ref|XP_010043725.1| PREDICTED: DNA-directed RNA polymerase III s...   493   e-137
ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theob...   493   e-136
ref|XP_007010804.1| DNA-directed RNA polymerase isoform 6 [Theob...   493   e-136
ref|XP_007010802.1| DNA-directed RNA polymerase isoform 4 [Theob...   493   e-136
ref|XP_007010800.1| DNA-directed RNA polymerase isoform 2 [Theob...   493   e-136
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob...   493   e-136
ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III s...   490   e-136

>ref|XP_010242622.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X2
            [Nelumbo nucifera]
          Length = 1140

 Score =  516 bits (1328), Expect = e-143
 Identities = 265/373 (71%), Positives = 300/373 (80%), Gaps = 11/373 (2%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG L A              IL+DK KIY++LN F   IP
Sbjct: 177  KVILIQEQLSKNRIIIDTDKKGCLNASVTSSTEATKSKTIILMDKGKIYLRLNAFVKDIP 236

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLEKKGTRI- 357
            IMV+MKAMGMESDQEVVQM+GRDP+Y ALL+PSIQECA   ++T+QQALE+LEKK  +  
Sbjct: 237  IMVVMKAMGMESDQEVVQMVGRDPKYGALLLPSIQECAGHGIYTQQQALEFLEKKVKKFS 296

Query: 358  ----------RALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDY 507
                      RA+D LR  FIANVPVR  NFRPKC+YVAVM+RRMMEA LNKDA+DDKDY
Sbjct: 297  FSNPALEKEGRAMDTLRNVFIANVPVRQNNFRPKCIYVAVMMRRMMEAFLNKDAMDDKDY 356

Query: 508  VGNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITN 687
            VGNKRLELSGQ ISLLFEDLFKT N+  +K+ D  L   NRS   D++ Y+ KD   IT 
Sbjct: 357  VGNKRLELSGQLISLLFEDLFKTMNSEARKSVDLQLAKVNRSVPVDIARYIVKDS--ITY 414

Query: 688  GLERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQP 867
            GLERA++TGNWD+KRFRMHR GMTQVLARLSFIAT+GHMTKI PQFEKSRKVSGPRALQP
Sbjct: 415  GLERAISTGNWDLKRFRMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQP 474

Query: 868  SQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHS 1047
            SQWGMLCPCDTPEGE+CGLVKNLALMTHVTTD+E  PLISLC SLGVEDLEL+SAEE+H+
Sbjct: 475  SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDEEGPLISLCHSLGVEDLELLSAEEIHT 534

Query: 1048 ANSFLVICNGLII 1086
             NS+LVI NGLI+
Sbjct: 535  PNSYLVIFNGLIL 547


>ref|XP_010242621.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X1
            [Nelumbo nucifera]
          Length = 1142

 Score =  516 bits (1328), Expect = e-143
 Identities = 265/373 (71%), Positives = 300/373 (80%), Gaps = 11/373 (2%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG L A              IL+DK KIY++LN F   IP
Sbjct: 179  KVILIQEQLSKNRIIIDTDKKGCLNASVTSSTEATKSKTIILMDKGKIYLRLNAFVKDIP 238

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLEKKGTRI- 357
            IMV+MKAMGMESDQEVVQM+GRDP+Y ALL+PSIQECA   ++T+QQALE+LEKK  +  
Sbjct: 239  IMVVMKAMGMESDQEVVQMVGRDPKYGALLLPSIQECAGHGIYTQQQALEFLEKKVKKFS 298

Query: 358  ----------RALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDY 507
                      RA+D LR  FIANVPVR  NFRPKC+YVAVM+RRMMEA LNKDA+DDKDY
Sbjct: 299  FSNPALEKEGRAMDTLRNVFIANVPVRQNNFRPKCIYVAVMMRRMMEAFLNKDAMDDKDY 358

Query: 508  VGNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITN 687
            VGNKRLELSGQ ISLLFEDLFKT N+  +K+ D  L   NRS   D++ Y+ KD   IT 
Sbjct: 359  VGNKRLELSGQLISLLFEDLFKTMNSEARKSVDLQLAKVNRSVPVDIARYIVKDS--ITY 416

Query: 688  GLERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQP 867
            GLERA++TGNWD+KRFRMHR GMTQVLARLSFIAT+GHMTKI PQFEKSRKVSGPRALQP
Sbjct: 417  GLERAISTGNWDLKRFRMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQP 476

Query: 868  SQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHS 1047
            SQWGMLCPCDTPEGE+CGLVKNLALMTHVTTD+E  PLISLC SLGVEDLEL+SAEE+H+
Sbjct: 477  SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDEEGPLISLCHSLGVEDLELLSAEEIHT 536

Query: 1048 ANSFLVICNGLII 1086
             NS+LVI NGLI+
Sbjct: 537  PNSYLVIFNGLIL 549


>emb|CDO98608.1| unnamed protein product [Coffea canephora]
          Length = 712

 Score =  513 bits (1320), Expect = e-142
 Identities = 261/371 (70%), Positives = 301/371 (81%), Gaps = 9/371 (2%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG + A              I ++KEKIY+ LN F S +P
Sbjct: 185  KVILIQEQLSKNRIIIDADKKGCVQASVTSSTAATKSKTVIKMEKEKIYLYLNQFKSKVP 244

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLEKKGTRI- 357
            IMV+MKAMGMESDQEVVQM+GRDPRY+ALL+PSI+ECA ANV+T+  ALEYLEK+  ++ 
Sbjct: 245  IMVVMKAMGMESDQEVVQMIGRDPRYSALLLPSIEECAKANVYTQHHALEYLEKQVKQLP 304

Query: 358  --------RALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDYVG 513
                    RAL +LR+ FIAN+PVR  NFR KC+YVAVMLRRMMEAILNKDA+DDKDYVG
Sbjct: 305  YAYAPVEKRALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVG 364

Query: 514  NKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITNGL 693
            NKRLELSGQ +SLLFEDLFKT N+ V+K  D  L   +RS++FDMS Y+ KD   IT GL
Sbjct: 365  NKRLELSGQLLSLLFEDLFKTMNDEVRKTIDAILSKTSRSSRFDMSQYIVKDS--ITVGL 422

Query: 694  ERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQPSQ 873
            ER L+TGNWD+KRFRMHR GMTQV+ARLS+I ++GHMTKI PQFEKSRKVSGPRALQPSQ
Sbjct: 423  ERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQ 482

Query: 874  WGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHSAN 1053
            WGMLCPCDTPEGE+CGLVKNLALMTHVTTDEE  P+ SLC SLGVEDLEL+S EELH  N
Sbjct: 483  WGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPISSLCYSLGVEDLELLSGEELHMPN 542

Query: 1054 SFLVICNGLII 1086
            SFL+I NGLI+
Sbjct: 543  SFLIILNGLIL 553


>ref|XP_002321356.2| hypothetical protein POPTR_0015s005302g, partial [Populus
            trichocarpa] gi|550321670|gb|EEF05483.2| hypothetical
            protein POPTR_0015s005302g, partial [Populus trichocarpa]
          Length = 1034

 Score =  511 bits (1316), Expect = e-142
 Identities = 265/373 (71%), Positives = 306/373 (82%), Gaps = 11/373 (2%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG + A              IL++KEK+Y+ LN F   IP
Sbjct: 188  KVILIQEQLSKNRIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIP 247

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLE---KKGT 351
            IMV+MKAMGMESDQEVVQM+GRDPRY+ALL+PSI+ECA+  V+T+QQALEYLE   K+ T
Sbjct: 248  IMVVMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECASHGVYTQQQALEYLEAMVKRST 307

Query: 352  --------RIRALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDY 507
                      RAL +LR+ FIANVPVR  NFRPKC+YVAVMLRRMMEA+LNKDA+DDKDY
Sbjct: 308  YSSSSTEKENRALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDY 367

Query: 508  VGNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITN 687
            VGNKRLELSGQ ISLLFEDLFKT    V+K ADT L   NRS++FD S Y+ +D   ITN
Sbjct: 368  VGNKRLELSGQLISLLFEDLFKTMITEVQKTADTLLVKQNRSSRFDFSQYIVRDS--ITN 425

Query: 688  GLERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQP 867
            GLERAL+TGNWD+KRFRM+R G+TQVL RLS++A++GHMT+I PQFEKSRKVSGPRALQP
Sbjct: 426  GLERALSTGNWDVKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQP 485

Query: 868  SQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHS 1047
            SQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDEE +PLISLC+ LGVEDLEL+S EELH+
Sbjct: 486  SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHT 545

Query: 1048 ANSFLVICNGLII 1086
             NSFLVI NGLI+
Sbjct: 546  PNSFLVIFNGLIL 558


>ref|XP_002321360.2| hypothetical protein POPTR_0015s005302g, partial [Populus
            trichocarpa] gi|550321669|gb|EEF05487.2| hypothetical
            protein POPTR_0015s005302g, partial [Populus trichocarpa]
          Length = 1035

 Score =  511 bits (1315), Expect = e-142
 Identities = 265/374 (70%), Positives = 306/374 (81%), Gaps = 12/374 (3%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG + A              IL++KEK+Y+ LN F   IP
Sbjct: 188  KVILIQEQLSKNRIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIP 247

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLE---KKGT 351
            IMV+MKAMGMESDQEVVQM+GRDPRY+ALL+PSI+ECA+  V+T+QQALEYLE   K+ T
Sbjct: 248  IMVVMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECASHGVYTQQQALEYLEAMVKRST 307

Query: 352  ---------RIRALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKD 504
                       RAL +LR+ FIANVPVR  NFRPKC+YVAVMLRRMMEA+LNKDA+DDKD
Sbjct: 308  YSSSSTEKQENRALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKD 367

Query: 505  YVGNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIIT 684
            YVGNKRLELSGQ ISLLFEDLFKT    V+K ADT L   NRS++FD S Y+ +D   IT
Sbjct: 368  YVGNKRLELSGQLISLLFEDLFKTMITEVQKTADTLLVKQNRSSRFDFSQYIVRDS--IT 425

Query: 685  NGLERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQ 864
            NGLERAL+TGNWD+KRFRM+R G+TQVL RLS++A++GHMT+I PQFEKSRKVSGPRALQ
Sbjct: 426  NGLERALSTGNWDVKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQ 485

Query: 865  PSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELH 1044
            PSQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDEE +PLISLC+ LGVEDLEL+S EELH
Sbjct: 486  PSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELH 545

Query: 1045 SANSFLVICNGLII 1086
            + NSFLVI NGLI+
Sbjct: 546  TPNSFLVIFNGLIL 559


>ref|XP_011003287.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X2
            [Populus euphratica]
          Length = 1150

 Score =  508 bits (1308), Expect = e-141
 Identities = 263/373 (70%), Positives = 305/373 (81%), Gaps = 11/373 (2%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG + A              IL++KEK+Y+ LN F   IP
Sbjct: 188  KVILIQEQLSKNRIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIP 247

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLE---KKGT 351
            IMV+MKAMGMESDQEVVQM+GRDPRY+ALL+PSI+ECA+  V+T++QALEYLE   K+ T
Sbjct: 248  IMVVMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECASHGVYTREQALEYLEAMVKRST 307

Query: 352  --------RIRALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDY 507
                      RAL +LR+ FIANVPVR  NFRPKC+YVAVMLRRMMEA+LNKDA+DDKDY
Sbjct: 308  YSSSSTEKENRALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDY 367

Query: 508  VGNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITN 687
            VGNKRLELSGQ ISLLFEDLFKT    V+K AD  L   NRS++FD S Y+ +D   ITN
Sbjct: 368  VGNKRLELSGQLISLLFEDLFKTMITEVQKIADALLVKQNRSSRFDFSQYIVRDS--ITN 425

Query: 688  GLERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQP 867
            GLERAL+TGNWD+KRFRM+R G+TQVL RLS++A++GHMT+I PQFEKSRKVSGPRALQP
Sbjct: 426  GLERALSTGNWDVKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQP 485

Query: 868  SQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHS 1047
            SQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDEE +PLISLC+ LGVEDLEL+S EELH+
Sbjct: 486  SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHT 545

Query: 1048 ANSFLVICNGLII 1086
             NSFLVI NGLI+
Sbjct: 546  PNSFLVIFNGLIL 558


>ref|XP_011003286.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X1
            [Populus euphratica]
          Length = 1151

 Score =  508 bits (1307), Expect = e-141
 Identities = 263/374 (70%), Positives = 305/374 (81%), Gaps = 12/374 (3%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG + A              IL++KEK+Y+ LN F   IP
Sbjct: 188  KVILIQEQLSKNRIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIP 247

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLE---KKGT 351
            IMV+MKAMGMESDQEVVQM+GRDPRY+ALL+PSI+ECA+  V+T++QALEYLE   K+ T
Sbjct: 248  IMVVMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECASHGVYTREQALEYLEAMVKRST 307

Query: 352  ---------RIRALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKD 504
                       RAL +LR+ FIANVPVR  NFRPKC+YVAVMLRRMMEA+LNKDA+DDKD
Sbjct: 308  YSSSSTEKQENRALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKD 367

Query: 505  YVGNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIIT 684
            YVGNKRLELSGQ ISLLFEDLFKT    V+K AD  L   NRS++FD S Y+ +D   IT
Sbjct: 368  YVGNKRLELSGQLISLLFEDLFKTMITEVQKIADALLVKQNRSSRFDFSQYIVRDS--IT 425

Query: 685  NGLERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQ 864
            NGLERAL+TGNWD+KRFRM+R G+TQVL RLS++A++GHMT+I PQFEKSRKVSGPRALQ
Sbjct: 426  NGLERALSTGNWDVKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQ 485

Query: 865  PSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELH 1044
            PSQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDEE +PLISLC+ LGVEDLEL+S EELH
Sbjct: 486  PSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELH 545

Query: 1045 SANSFLVICNGLII 1086
            + NSFLVI NGLI+
Sbjct: 546  TPNSFLVIFNGLIL 559


>ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera] gi|731414225|ref|XP_010659065.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1157

 Score =  507 bits (1306), Expect = e-141
 Identities = 257/373 (68%), Positives = 307/373 (82%), Gaps = 11/373 (2%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG + A              I+++KEKI++QLN FTS IP
Sbjct: 192  KVILIQEQLSKNRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIP 251

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLEKKGTRI- 357
            IM++MKAMGMESDQEVVQM+GR+PRY+ALL+PS++ECA+  ++T+QQALE+LE+K  ++ 
Sbjct: 252  IMIVMKAMGMESDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLP 311

Query: 358  ----------RALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDY 507
                      R + +LR+TFIANVPVR  NFRPKC+YVAVMLRRMM+AILNKDA+DDKDY
Sbjct: 312  FYNPSLEKEGRGMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDY 371

Query: 508  VGNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITN 687
            VGNKRLELSGQ ISLLFEDLFKT  + VKK  D  L   +RS++FD S ++ +D   IT 
Sbjct: 372  VGNKRLELSGQLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQFIVRDS--ITV 429

Query: 688  GLERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQP 867
            GLER L+TGNWD+KRFRMHR GM+QV+ARLS+I ++GHMTKI PQFEKSRKVSGPRALQP
Sbjct: 430  GLERTLSTGNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQP 489

Query: 868  SQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHS 1047
            SQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDEE +PLISLC SLGVEDLEL+S EELH+
Sbjct: 490  SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHT 549

Query: 1048 ANSFLVICNGLII 1086
             NSFL+I NGLI+
Sbjct: 550  PNSFLIIFNGLIL 562


>ref|XP_012068721.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Jatropha
            curcas] gi|643733723|gb|KDP40566.1| hypothetical protein
            JCGZ_24565 [Jatropha curcas]
          Length = 1152

 Score =  502 bits (1293), Expect = e-139
 Identities = 259/373 (69%), Positives = 299/373 (80%), Gaps = 11/373 (2%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG + A              I ++KEK+Y+ LN F   IP
Sbjct: 190  KVILIQEQLSKNRIIIDNDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFAKKIP 249

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLEKKGT--- 351
            IMV+MKAMGMESDQEVVQMLGRDPRY+ALL+PSI+ECA+ N++T+Q+ALEYLE K     
Sbjct: 250  IMVVMKAMGMESDQEVVQMLGRDPRYSALLLPSIEECASLNIYTQQKALEYLEGKVKMPT 309

Query: 352  --------RIRALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDY 507
                      RAL +LR+ F+ANVPV   NFRPKC+YVAVMLRRMMEA+LNKDA+DDKDY
Sbjct: 310  YFSSSYVKENRALGILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDY 369

Query: 508  VGNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITN 687
            VGNKRLELSGQ ISLLFEDLFKT    V++  D  L   NRS++FD++ YL +D   ITN
Sbjct: 370  VGNKRLELSGQLISLLFEDLFKTMITEVQRTIDAVLSKPNRSSRFDLAQYLVRDS--ITN 427

Query: 688  GLERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQP 867
            GLER L+TGN+D+KRFRMHR GMTQVL RLSFIA++G MT++ PQFEKSRKVSGPRALQP
Sbjct: 428  GLERTLSTGNFDVKRFRMHRKGMTQVLVRLSFIASLGMMTRVSPQFEKSRKVSGPRALQP 487

Query: 868  SQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHS 1047
            SQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDEE  PLISLC  LGVEDLEL+S EELH+
Sbjct: 488  SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHT 547

Query: 1048 ANSFLVICNGLII 1086
             NSFLVICNGLI+
Sbjct: 548  PNSFLVICNGLIL 560


>ref|XP_011085923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2 [Sesamum
            indicum]
          Length = 1152

 Score =  502 bits (1292), Expect = e-139
 Identities = 252/372 (67%), Positives = 301/372 (80%), Gaps = 10/372 (2%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG + A              I ++KEKIY+ LN FTS +P
Sbjct: 188  KVILIQEQLSKNRIIIDTDKKGCVQASVTSSTEMTKSKTVIRMEKEKIYLYLNQFTSKVP 247

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLEKKGTRI- 357
            IMV++KAMGMESDQEVVQM+GRDPRY+ LL+PSI++C    VHT+ QALE+LE+K  ++ 
Sbjct: 248  IMVVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCVKEAVHTQHQALEFLEQKVKKLP 307

Query: 358  ---------RALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDYV 510
                     RAL +LR+ F+AN+PVR  NFRPKC+YVAVM+RR++EAILNKDA+DDKDYV
Sbjct: 308  YSTPADKEGRALGILRDIFLANIPVRQNNFRPKCIYVAVMVRRILEAILNKDAMDDKDYV 367

Query: 511  GNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITNG 690
            GNKRLELSGQ +SLLFEDLFKT N+  +K  DT L   +RS++FD+S ++ KD   IT G
Sbjct: 368  GNKRLELSGQLLSLLFEDLFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDS--ITVG 425

Query: 691  LERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQPS 870
            LER L+TGNWD+KRFRMHR GMTQV+ARLS+I T+GHMTKI PQFEKSRKVSGPRALQPS
Sbjct: 426  LERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPS 485

Query: 871  QWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHSA 1050
            QWGMLCPCDTPEGE+CGLVKNLALMTHVTTD++  PLISLC SLGVEDLEL+S EELH  
Sbjct: 486  QWGMLCPCDTPEGEACGLVKNLALMTHVTTDDDEGPLISLCYSLGVEDLELLSGEELHMP 545

Query: 1051 NSFLVICNGLII 1086
            NS+L+I NGLI+
Sbjct: 546  NSYLIILNGLIL 557


>ref|XP_012459628.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Gossypium
            raimondii] gi|763808128|gb|KJB75030.1| hypothetical
            protein B456_012G019600 [Gossypium raimondii]
          Length = 1158

 Score =  495 bits (1274), Expect = e-137
 Identities = 257/373 (68%), Positives = 294/373 (78%), Gaps = 11/373 (2%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG + A              I ++KEKIY+ LN F   IP
Sbjct: 191  KVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIP 250

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLEKKGTRI- 357
            IMV+MKAMGMESDQEVVQMLGRDPR++ALL+PSI+ECA   ++TK+QAL YL+ K  R  
Sbjct: 251  IMVVMKAMGMESDQEVVQMLGRDPRFSALLLPSIEECAGIGIYTKEQALAYLDTKAKRPL 310

Query: 358  ----------RALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDY 507
                      RA  +LR+ FIANVPVR  NFRPKC+YVAVMLRRMMEAILNKDA+DDKDY
Sbjct: 311  YASSASDQDGRAFCILRDVFIANVPVRCNNFRPKCLYVAVMLRRMMEAILNKDAMDDKDY 370

Query: 508  VGNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITN 687
            VGNKRLELSGQ ISLLFEDLFKT    VKK+ D+ L   +RS+  D S +LR+    IT 
Sbjct: 371  VGNKRLELSGQLISLLFEDLFKTTLAQVKKSIDSVLSKTSRSSALDPSQFLRR-MEFITT 429

Query: 688  GLERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQP 867
            GLER L+TGN+DI+RFRMHR GMTQVLARLSFI T+G MTK+ PQFEKSRKVSGPRALQP
Sbjct: 430  GLERTLSTGNFDIQRFRMHRKGMTQVLARLSFIGTLGFMTKVSPQFEKSRKVSGPRALQP 489

Query: 868  SQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHS 1047
            SQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDE+  PL+SLC  LGVEDLEL+S EELH+
Sbjct: 490  SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLVSLCYCLGVEDLELLSGEELHT 549

Query: 1048 ANSFLVICNGLII 1086
             NSFLV+ NGLI+
Sbjct: 550  PNSFLVMLNGLIL 562


>gb|KJB75029.1| hypothetical protein B456_012G019600 [Gossypium raimondii]
          Length = 1159

 Score =  495 bits (1274), Expect = e-137
 Identities = 257/373 (68%), Positives = 294/373 (78%), Gaps = 11/373 (2%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG + A              I ++KEKIY+ LN F   IP
Sbjct: 191  KVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIP 250

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLEKKGTRI- 357
            IMV+MKAMGMESDQEVVQMLGRDPR++ALL+PSI+ECA   ++TK+QAL YL+ K  R  
Sbjct: 251  IMVVMKAMGMESDQEVVQMLGRDPRFSALLLPSIEECAGIGIYTKEQALAYLDTKAKRPL 310

Query: 358  ----------RALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDY 507
                      RA  +LR+ FIANVPVR  NFRPKC+YVAVMLRRMMEAILNKDA+DDKDY
Sbjct: 311  YASSASDQDGRAFCILRDVFIANVPVRCNNFRPKCLYVAVMLRRMMEAILNKDAMDDKDY 370

Query: 508  VGNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITN 687
            VGNKRLELSGQ ISLLFEDLFKT    VKK+ D+ L   +RS+  D S +LR+    IT 
Sbjct: 371  VGNKRLELSGQLISLLFEDLFKTTLAQVKKSIDSVLSKTSRSSALDPSQFLRR-MEFITT 429

Query: 688  GLERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQP 867
            GLER L+TGN+DI+RFRMHR GMTQVLARLSFI T+G MTK+ PQFEKSRKVSGPRALQP
Sbjct: 430  GLERTLSTGNFDIQRFRMHRKGMTQVLARLSFIGTLGFMTKVSPQFEKSRKVSGPRALQP 489

Query: 868  SQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHS 1047
            SQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDE+  PL+SLC  LGVEDLEL+S EELH+
Sbjct: 490  SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLVSLCYCLGVEDLELLSGEELHT 549

Query: 1048 ANSFLVICNGLII 1086
             NSFLV+ NGLI+
Sbjct: 550  PNSFLVMLNGLIL 562


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score =  495 bits (1274), Expect = e-137
 Identities = 251/362 (69%), Positives = 298/362 (82%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG + A              I ++KEK+Y+ LN F   IP
Sbjct: 190  KVILIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFVKKIP 249

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLEKKGTRIR 360
            IMV++KAMGMESDQEVVQM+GRDPRY+ALL+PSI+ECA  +++T+Q+ALEYL+  G   R
Sbjct: 250  IMVVIKAMGMESDQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKALEYLD--GKENR 307

Query: 361  ALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDYVGNKRLELSGQ 540
            AL +LR+ F+ANVPV   NFRPKC+YVAVMLRRMMEA+LNKDA+DDKDYVGNKRLELSGQ
Sbjct: 308  ALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKRLELSGQ 367

Query: 541  SISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITNGLERALATGNW 720
             ISLLFEDLFKT    V++  DT L   NRS++FD++ Y+ +D   ITNGLER L+TGN+
Sbjct: 368  LISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDN--ITNGLERTLSTGNF 425

Query: 721  DIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQPSQWGMLCPCDT 900
            D+KRF+MHR GMTQVL RLS+IA++G MT++ PQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 426  DVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 485

Query: 901  PEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHSANSFLVICNGL 1080
            PEGE+CGLVKNLALMTHVTTD+E  PLISLC  LGVEDLEL+S EELH+ NSFLVI NGL
Sbjct: 486  PEGEACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLSGEELHTPNSFLVIFNGL 545

Query: 1081 II 1086
            I+
Sbjct: 546  IL 547


>ref|XP_010043725.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2 [Eucalyptus
            grandis]
          Length = 1152

 Score =  493 bits (1270), Expect = e-137
 Identities = 254/373 (68%), Positives = 298/373 (79%), Gaps = 11/373 (2%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG + A              ++++K K+Y+QLN F   IP
Sbjct: 180  KVILIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVVVMEKGKMYLQLNQFAKNIP 239

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLEKK----- 345
            IM++MKAM MESDQEVVQM+GRDPRY+ALL+ SI+ECA+ ++ T+QQALE+LE K     
Sbjct: 240  IMIVMKAMRMESDQEVVQMIGRDPRYSALLLQSIEECASLSIFTQQQALEFLEGKLKKLP 299

Query: 346  ------GTRIRALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDY 507
                  G   RA+ +LR+ F+ANV V   NFRPKC+YVAVMLRRMMEAILNKDA+DDKDY
Sbjct: 300  YANMSTGKEGRAMSILRDVFLANVRVIKNNFRPKCIYVAVMLRRMMEAILNKDAMDDKDY 359

Query: 508  VGNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITN 687
            VGNKRLELSGQ ISLLFEDLFKT  + V+K AD  L   +RS++ D+S  L KD  IIT 
Sbjct: 360  VGNKRLELSGQLISLLFEDLFKTMISEVQKQADNVLSKRSRSSQLDLSMLLVKD--IITQ 417

Query: 688  GLERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQP 867
            GLERAL+TGNWD+KRFRMHR GMTQVLARLSFI T+GH+T+I PQFEKSRKVSGPRALQP
Sbjct: 418  GLERALSTGNWDVKRFRMHRKGMTQVLARLSFIGTLGHVTRISPQFEKSRKVSGPRALQP 477

Query: 868  SQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHS 1047
            SQWGMLCPCDTPEGE+CGLVKNLALMTHVTTD+E  PLI+LC  LGVEDLEL+S EELH+
Sbjct: 478  SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLIALCYCLGVEDLELLSGEELHT 537

Query: 1048 ANSFLVICNGLII 1086
             NSFL+I NGLI+
Sbjct: 538  PNSFLIIFNGLIL 550


>ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theobroma cacao]
            gi|508727718|gb|EOY19615.1| DNA-directed RNA polymerase
            isoform 7 [Theobroma cacao]
          Length = 1082

 Score =  493 bits (1269), Expect = e-136
 Identities = 256/373 (68%), Positives = 294/373 (78%), Gaps = 11/373 (2%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG + A              I ++KEKIY+ LN F   IP
Sbjct: 93   KVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIP 152

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLEKKGTRI- 357
            IMV+MKAMGMESDQEVVQM+GRDP Y A+L+PSI+ECA   ++T++QALEYLE K  R+ 
Sbjct: 153  IMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVM 212

Query: 358  ----------RALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDY 507
                      RAL +LR+ F+ANVPVR  NFRPKC+YVAVMLRRM+EAILNKDA+DDKDY
Sbjct: 213  YTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDY 272

Query: 508  VGNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITN 687
            VGNKRLELSGQ ISLLFEDLFKT  + V+K  D  L   +RS+  D S +LR     IT 
Sbjct: 273  VGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSR-ETITF 331

Query: 688  GLERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQP 867
            GLER L+TGN+DIKRF+MHR GMTQVLARLSFI T+G+MTK+ PQFEKSRKVSGPRALQP
Sbjct: 332  GLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQP 391

Query: 868  SQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHS 1047
            SQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDE+  PLISLC  LGVEDLEL+S EELH+
Sbjct: 392  SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHT 451

Query: 1048 ANSFLVICNGLII 1086
             NSFLVI NGLI+
Sbjct: 452  PNSFLVILNGLIL 464


>ref|XP_007010804.1| DNA-directed RNA polymerase isoform 6 [Theobroma cacao]
            gi|508727717|gb|EOY19614.1| DNA-directed RNA polymerase
            isoform 6 [Theobroma cacao]
          Length = 1034

 Score =  493 bits (1269), Expect = e-136
 Identities = 256/373 (68%), Positives = 294/373 (78%), Gaps = 11/373 (2%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG + A              I ++KEKIY+ LN F   IP
Sbjct: 192  KVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIP 251

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLEKKGTRI- 357
            IMV+MKAMGMESDQEVVQM+GRDP Y A+L+PSI+ECA   ++T++QALEYLE K  R+ 
Sbjct: 252  IMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVM 311

Query: 358  ----------RALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDY 507
                      RAL +LR+ F+ANVPVR  NFRPKC+YVAVMLRRM+EAILNKDA+DDKDY
Sbjct: 312  YTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDY 371

Query: 508  VGNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITN 687
            VGNKRLELSGQ ISLLFEDLFKT  + V+K  D  L   +RS+  D S +LR     IT 
Sbjct: 372  VGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSR-ETITF 430

Query: 688  GLERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQP 867
            GLER L+TGN+DIKRF+MHR GMTQVLARLSFI T+G+MTK+ PQFEKSRKVSGPRALQP
Sbjct: 431  GLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQP 490

Query: 868  SQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHS 1047
            SQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDE+  PLISLC  LGVEDLEL+S EELH+
Sbjct: 491  SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHT 550

Query: 1048 ANSFLVICNGLII 1086
             NSFLVI NGLI+
Sbjct: 551  PNSFLVILNGLIL 563


>ref|XP_007010802.1| DNA-directed RNA polymerase isoform 4 [Theobroma cacao]
            gi|508727715|gb|EOY19612.1| DNA-directed RNA polymerase
            isoform 4 [Theobroma cacao]
          Length = 1034

 Score =  493 bits (1269), Expect = e-136
 Identities = 256/373 (68%), Positives = 294/373 (78%), Gaps = 11/373 (2%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG + A              I ++KEKIY+ LN F   IP
Sbjct: 192  KVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIP 251

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLEKKGTRI- 357
            IMV+MKAMGMESDQEVVQM+GRDP Y A+L+PSI+ECA   ++T++QALEYLE K  R+ 
Sbjct: 252  IMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVM 311

Query: 358  ----------RALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDY 507
                      RAL +LR+ F+ANVPVR  NFRPKC+YVAVMLRRM+EAILNKDA+DDKDY
Sbjct: 312  YTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDY 371

Query: 508  VGNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITN 687
            VGNKRLELSGQ ISLLFEDLFKT  + V+K  D  L   +RS+  D S +LR     IT 
Sbjct: 372  VGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSR-ETITF 430

Query: 688  GLERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQP 867
            GLER L+TGN+DIKRF+MHR GMTQVLARLSFI T+G+MTK+ PQFEKSRKVSGPRALQP
Sbjct: 431  GLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQP 490

Query: 868  SQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHS 1047
            SQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDE+  PLISLC  LGVEDLEL+S EELH+
Sbjct: 491  SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHT 550

Query: 1048 ANSFLVICNGLII 1086
             NSFLVI NGLI+
Sbjct: 551  PNSFLVILNGLIL 563


>ref|XP_007010800.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
            gi|508727713|gb|EOY19610.1| DNA-directed RNA polymerase
            isoform 2 [Theobroma cacao]
          Length = 1011

 Score =  493 bits (1269), Expect = e-136
 Identities = 256/373 (68%), Positives = 294/373 (78%), Gaps = 11/373 (2%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG + A              I ++KEKIY+ LN F   IP
Sbjct: 192  KVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIP 251

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLEKKGTRI- 357
            IMV+MKAMGMESDQEVVQM+GRDP Y A+L+PSI+ECA   ++T++QALEYLE K  R+ 
Sbjct: 252  IMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVM 311

Query: 358  ----------RALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDY 507
                      RAL +LR+ F+ANVPVR  NFRPKC+YVAVMLRRM+EAILNKDA+DDKDY
Sbjct: 312  YTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDY 371

Query: 508  VGNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITN 687
            VGNKRLELSGQ ISLLFEDLFKT  + V+K  D  L   +RS+  D S +LR     IT 
Sbjct: 372  VGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSR-ETITF 430

Query: 688  GLERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQP 867
            GLER L+TGN+DIKRF+MHR GMTQVLARLSFI T+G+MTK+ PQFEKSRKVSGPRALQP
Sbjct: 431  GLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQP 490

Query: 868  SQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHS 1047
            SQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDE+  PLISLC  LGVEDLEL+S EELH+
Sbjct: 491  SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHT 550

Query: 1048 ANSFLVICNGLII 1086
             NSFLVI NGLI+
Sbjct: 551  PNSFLVILNGLIL 563


>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1158

 Score =  493 bits (1269), Expect = e-136
 Identities = 256/373 (68%), Positives = 294/373 (78%), Gaps = 11/373 (2%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIID D+KG + A              I ++KEKIY+ LN F   IP
Sbjct: 192  KVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIP 251

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLEKKGTRI- 357
            IMV+MKAMGMESDQEVVQM+GRDP Y A+L+PSI+ECA   ++T++QALEYLE K  R+ 
Sbjct: 252  IMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVM 311

Query: 358  ----------RALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDY 507
                      RAL +LR+ F+ANVPVR  NFRPKC+YVAVMLRRM+EAILNKDA+DDKDY
Sbjct: 312  YTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDY 371

Query: 508  VGNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITN 687
            VGNKRLELSGQ ISLLFEDLFKT  + V+K  D  L   +RS+  D S +LR     IT 
Sbjct: 372  VGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSR-ETITF 430

Query: 688  GLERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQP 867
            GLER L+TGN+DIKRF+MHR GMTQVLARLSFI T+G+MTK+ PQFEKSRKVSGPRALQP
Sbjct: 431  GLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQP 490

Query: 868  SQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHS 1047
            SQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDE+  PLISLC  LGVEDLEL+S EELH+
Sbjct: 491  SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHT 550

Query: 1048 ANSFLVICNGLII 1086
             NSFLVI NGLI+
Sbjct: 551  PNSFLVILNGLIL 563


>ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Fragaria
            vesca subsp. vesca]
          Length = 1163

 Score =  490 bits (1262), Expect = e-136
 Identities = 253/373 (67%), Positives = 298/373 (79%), Gaps = 11/373 (2%)
 Frame = +1

Query: 1    KVVLIQEQLSNNRIIIDMDRKGRLMAXXXXXXXXXXXXXNILIDKEKIYVQLNLFTSLIP 180
            KV+LIQEQLS NRIIIDMD+KG + A              I ++K+KIY++LN F+  IP
Sbjct: 201  KVLLIQEQLSKNRIIIDMDKKGNVNASVTSSSETIKSKTIIQMEKQKIYLELNQFSKKIP 260

Query: 181  IMVIMKAMGMESDQEVVQMLGRDPRYAALLVPSIQECAAANVHTKQQALEYLEKKGTRI- 357
            IMV+MKAMGM SDQEVVQM+GRDPRY ALL+PSI+ECA   ++TK+QAL YLE K  R  
Sbjct: 261  IMVVMKAMGMTSDQEVVQMVGRDPRYGALLMPSIEECAKEGIYTKEQALLYLEPKVKRSM 320

Query: 358  ----------RALDVLRETFIANVPVRDLNFRPKCVYVAVMLRRMMEAILNKDAIDDKDY 507
                      + + VLR+ FIANVPVR  NFRPKC+YVAVMLRR+M+AILNKD +DDKDY
Sbjct: 321  FDSASSDKDSKVMAVLRDIFIANVPVRRSNFRPKCIYVAVMLRRIMDAILNKDTMDDKDY 380

Query: 508  VGNKRLELSGQSISLLFEDLFKTNNNMVKKAADTDLKNANRSTKFDMSYYLRKDFHIITN 687
            VGNKRLELSGQSISLLFEDLFKT  + V+K  D  L   +RS++FD++ Y+RKD   I+ 
Sbjct: 381  VGNKRLELSGQSISLLFEDLFKTMISEVRKTVDNILTKPSRSSRFDLAQYIRKDQ--ISL 438

Query: 688  GLERALATGNWDIKRFRMHRTGMTQVLARLSFIATVGHMTKIQPQFEKSRKVSGPRALQP 867
            GLER L+TGN+D+KRF+MHRTGMTQVLARLSFI ++G MT+ +PQFEKSRKVSGPRALQP
Sbjct: 439  GLERTLSTGNFDLKRFKMHRTGMTQVLARLSFIGSLGQMTRTKPQFEKSRKVSGPRALQP 498

Query: 868  SQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEAAPLISLCRSLGVEDLELMSAEELHS 1047
            SQWGMLCPCDTPEGE+CGLVKNLALM HVTTDEE  PLISLC+ LGVEDLE +SAEELHS
Sbjct: 499  SQWGMLCPCDTPEGEACGLVKNLALMAHVTTDEEEGPLISLCKCLGVEDLETLSAEELHS 558

Query: 1048 ANSFLVICNGLII 1086
             NSFLV+ NG I+
Sbjct: 559  PNSFLVLFNGDIL 571