BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00012659
         (2387 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010254371.1| PREDICTED: mediator of RNA polymerase II tra...   826   0.0  
ref|XP_002285089.1| PREDICTED: mediator of RNA polymerase II tra...   775   0.0  
ref|XP_007204608.1| hypothetical protein PRUPE_ppa002594mg [Prun...   746   0.0  
ref|XP_008242750.1| PREDICTED: mediator of RNA polymerase II tra...   744   0.0  
ref|XP_009368825.1| PREDICTED: mediator of RNA polymerase II tra...   736   0.0  
ref|XP_008337314.1| PREDICTED: mediator of RNA polymerase II tra...   735   0.0  
ref|XP_007013390.1| RNA polymerase II transcription mediators is...   724   0.0  
ref|XP_010093735.1| hypothetical protein L484_006289 [Morus nota...   723   0.0  
ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II tra...   723   0.0  
ref|XP_012078751.1| PREDICTED: mediator of RNA polymerase II tra...   722   0.0  
ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citr...   714   0.0  
ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II tra...   714   0.0  
ref|XP_006374395.1| hypothetical protein POPTR_0015s06780g [Popu...   713   0.0  
gb|KHG17744.1| mediator of rna polymerase ii transcription subun...   709   0.0  
ref|XP_011007274.1| PREDICTED: mediator of RNA polymerase II tra...   707   0.0  
ref|XP_012445472.1| PREDICTED: mediator of RNA polymerase II tra...   707   0.0  
emb|CDP10383.1| unnamed protein product [Coffea canephora]            706   0.0  
ref|XP_012456203.1| PREDICTED: mediator of RNA polymerase II tra...   702   0.0  
ref|XP_009781829.1| PREDICTED: mediator of RNA polymerase II tra...   700   0.0  
gb|KJB07723.1| hypothetical protein B456_001G041100 [Gossypium r...   697   0.0  

>ref|XP_010254371.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
            [Nelumbo nucifera]
          Length = 667

 Score =  826 bits (2133), Expect = 0.0
 Identities = 433/665 (65%), Positives = 504/665 (75%), Gaps = 13/665 (1%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            MDGN+EI++D LPIKRLDA+EE+G+E FPPDIGHD+KRL LIRRIDFAWAVE        
Sbjct: 1    MDGNMEISLDKLPIKRLDAIEENGIERFPPDIGHDEKRLSLIRRIDFAWAVEKDTKKQKT 60

Query: 1900 XXXXXKPWPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKPLPSELLSDLS 1721
                  PWPWQ+LVENLQLAHQELSVIID INTVEANDAVTVAGM RPK LP+E+LSDLS
Sbjct: 61   SKETTTPWPWQSLVENLQLAHQELSVIIDLINTVEANDAVTVAGMIRPKQLPNEILSDLS 120

Query: 1720 VSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQRTTVSTSSSE 1541
            VSAATKLQCFR+LG+YFKQSAKGLEQQ+AREARFYGALIRLQ+NWKVKRQR  V    SE
Sbjct: 121  VSAATKLQCFRNLGRYFKQSAKGLEQQVAREARFYGALIRLQQNWKVKRQRLPVPAPGSE 180

Query: 1540 GFTIDLYDNS-SDPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIHFGFLGGRSGYE 1364
            GFTIDL+DNS SDP A++RPPSIS++RVDHDSAGMLAV+LP KSC S+HFGFLGG+SG++
Sbjct: 181  GFTIDLFDNSLSDPGAIFRPPSISTVRVDHDSAGMLAVHLPQKSCHSLHFGFLGGQSGHK 240

Query: 1363 RHDC---------VGKLPLGEKKAVRDDDVDVCVKETHLVLREVHRAIFHEQVFDLVNRE 1211
                         V +    +K+ + + DVD CVKETH VLREVHRAIF EQVFDLV+RE
Sbjct: 241  PGKSSKVKIYASDVHQSEEIKKETMSEQDVDQCVKETHSVLREVHRAIFDEQVFDLVSRE 300

Query: 1210 AFSPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQNWETVLIPSDT 1031
            AF+ S GVNV G+RENYL+L IGQGASVYISLVP  QD D+T ++    N        D 
Sbjct: 301  AFNSSSGVNVIGLRENYLQLRIGQGASVYISLVPSGQDADQTVDNASSDNLGNADSSVDM 360

Query: 1030 FDTVRVGEQMHDT--KISKFPSSISYEIYLQQFFHENALARVKDRRPFVGRTQTVAGQPF 857
            F+ V++ E+ + T  + S+FP+ +S EIYLQQ FHEN   R KDRR  V R Q  +GQP 
Sbjct: 361  FEGVKMAEEKYVTPKRKSRFPNPVSCEIYLQQIFHENMFIRAKDRRHSVRRIQA-SGQPV 419

Query: 856  GKGIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRTSSWSLLMKVPQ 677
                 LLGHF  TLAHRIF+NKVLA+LE LA+ VSYL LL+ PTWHSRTSSWSL MKVPQ
Sbjct: 420  TDVFGLLGHFCMTLAHRIFANKVLAELEILASRVSYLHLLSHPTWHSRTSSWSLSMKVPQ 479

Query: 676  SIVQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSVFNGGTEKTCSL 497
            SI+  G+R RP ++ S K+ V+SQF TKVVV DDCINIEGEGAPNVV +F G  E  CS+
Sbjct: 480  SILHAGHRTRPSDMRSTKSAVRSQFITKVVVNDDCINIEGEGAPNVVGLFKGSAEDICSM 539

Query: 496  NNYGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELDQGDRLCLVARV 317
            N+Y  +L DLPVILLQQVASQV+ WL EEA++VGMK SRDFLCLSFELDQG+ L LVA V
Sbjct: 540  NSYDCNLPDLPVILLQQVASQVVRWLHEEALLVGMKASRDFLCLSFELDQGETLGLVAHV 599

Query: 316  DPKDTEGCISWWLVLADGLMQEGKLRTS-SNGESENVKFXXXXXXXXXXXXXXXXXXLCN 140
            DP+D +GCISWWLV+ DGLM+EGKL T  S+  S+  +F                  LCN
Sbjct: 600  DPEDIQGCISWWLVMDDGLMEEGKLHTDFSSDASDTRRFLGHLSLEALYSTLMDLVTLCN 659

Query: 139  GEGSH 125
              GSH
Sbjct: 660  SSGSH 664


>ref|XP_002285089.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
            [Vitis vinifera] gi|147821405|emb|CAN63500.1|
            hypothetical protein VITISV_011675 [Vitis vinifera]
            gi|297738929|emb|CBI28174.3| unnamed protein product
            [Vitis vinifera]
          Length = 660

 Score =  775 bits (2000), Expect = 0.0
 Identities = 406/662 (61%), Positives = 485/662 (73%), Gaps = 10/662 (1%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            MDG +EI++D LPIKRLDA+EE+G E FP D+G+D KR+ LIRRIDFAWAVE        
Sbjct: 1    MDGKMEISLDKLPIKRLDAIEENGAERFPTDVGYDDKRVSLIRRIDFAWAVEKDTKKQKK 60

Query: 1900 XXXXXK-PWPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKPLPSELLSDL 1724
                   PWPWQ+LVENL+LAHQELSVIID I+TVEANDAVTVA MTRPKPLP+E+LSDL
Sbjct: 61   ASKEEATPWPWQSLVENLRLAHQELSVIIDLISTVEANDAVTVASMTRPKPLPNEVLSDL 120

Query: 1723 SVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQRTTVSTSSS 1544
             VSAATKLQCFRHL KYFKQSAK LEQQIAREARFYGALIRLQ+NWKVKRQR   S   +
Sbjct: 121  GVSAATKLQCFRHLSKYFKQSAKALEQQIAREARFYGALIRLQQNWKVKRQRVAASAPGN 180

Query: 1543 EGFTIDLYDNS-SDPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIHFGFLGGRSGY 1367
            EGF+IDL+ NS  DP+AV+RP S+S++RVDHDSAGMLAV+LPP SCR++HFGFLGG  G 
Sbjct: 181  EGFSIDLFSNSLHDPVAVFRPSSLSTVRVDHDSAGMLAVHLPPNSCRALHFGFLGGHLGN 240

Query: 1366 -----ERHDCVGKLPLGEKKAVRDDDVDVCVKETHLVLREVHRAIFHEQVFDLVNREAFS 1202
                  +    G   L  K+  +    + CVKETH VLRE H+AIF EQVFDLVNREAF+
Sbjct: 241  IPKEPSKTKTYGPDELPSKEIKKPLSDNECVKETHSVLREGHQAIFDEQVFDLVNREAFN 300

Query: 1201 PSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQNWETVLIPSDTFDT 1022
             S GVNVTGIRENYL+L IGQGASV++SLVP  QD ++T +    QN E+ ++P DTFD 
Sbjct: 301  SSSGVNVTGIRENYLQLNIGQGASVFMSLVPSGQD-EKTADGMGMQNLESAILPMDTFDG 359

Query: 1021 VRVGEQMHDT--KISKFPSSISYEIYLQQFFHENALARVKDRRPFVGRTQTVAGQPFGKG 848
            V++ +  HD   K S FP+ IS EIYL+Q FHE+   R KD+    GRTQ  + QP   G
Sbjct: 360  VKLSDGKHDNDKKKSGFPNRISSEIYLKQLFHEHVFVRAKDKHISAGRTQP-SSQPAKDG 418

Query: 847  IDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRTSSWSLLMKVPQSIV 668
              LLGHF  +LAHRIFS+KVL +LENL + V YL LL+ PTWHSRTSSW+LLMKVP+S  
Sbjct: 419  FGLLGHFCMSLAHRIFSSKVLMELENLVSRVPYLHLLSHPTWHSRTSSWTLLMKVPESSF 478

Query: 667  QGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSVFNGGTEKTCSLNNY 488
              G + R  +IH+ KN +K+ F TKVV+ DDCIN+EG+GAPNVV +F G +E  CS+N Y
Sbjct: 479  HPGCQTRTSDIHNVKNIIKTHFRTKVVINDDCINVEGDGAPNVVGLFKGSSEDVCSMNRY 538

Query: 487  GYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELDQGDRLCLVARVDPK 308
              DLAD+PVILLQQVASQVI WL EEA+ VG+K +RDFLCLSFE+DQG+ L LVA V+P 
Sbjct: 539  DCDLADIPVILLQQVASQVIRWLHEEALKVGIKANRDFLCLSFEMDQGEMLSLVAHVNPD 598

Query: 307  DTEGCISWWLVLADGLMQEGKLRTSS-NGESENVKFXXXXXXXXXXXXXXXXXXLCNGEG 131
            D +GCISWWLV+ DG  ++ K  T + +G SE  KF                  LCNG G
Sbjct: 599  DPQGCISWWLVMDDGFSEDLKFHTDAPDGGSEYRKFLGHLSLEVLYSTLMDLVSLCNGGG 658

Query: 130  SH 125
             H
Sbjct: 659  RH 660


>ref|XP_007204608.1| hypothetical protein PRUPE_ppa002594mg [Prunus persica]
            gi|462400139|gb|EMJ05807.1| hypothetical protein
            PRUPE_ppa002594mg [Prunus persica]
          Length = 654

 Score =  746 bits (1925), Expect = 0.0
 Identities = 398/662 (60%), Positives = 478/662 (72%), Gaps = 11/662 (1%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            MDG +EI++D LPIKRLD +EE+GLE FPPD+G+++KR  LIRRIDFAWAVE        
Sbjct: 1    MDGKMEISLDKLPIKRLDVIEENGLERFPPDVGYEEKRQSLIRRIDFAWAVEKDENKKQK 60

Query: 1900 XXXXXKP---WPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKPLPSELLS 1730
                      W WQ++VENLQLAHQELSVIID INTVE NDAVTVA MTRPKP   E++S
Sbjct: 61   KSSKESAATQWQWQSMVENLQLAHQELSVIIDLINTVETNDAVTVASMTRPKPFHDEVMS 120

Query: 1729 DLSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQRTTVSTS 1550
            DL+VSAATKLQCFRHLGKYFKQSAK LE+Q+AREARFYGALIRLQ+NWKVKRQR   S S
Sbjct: 121  DLAVSAATKLQCFRHLGKYFKQSAKALERQVAREARFYGALIRLQQNWKVKRQRVAASAS 180

Query: 1549 SSEGFTIDLYDNS-SDPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIHFGFLGGRS 1373
             +EGFTIDL+D+S  DP A++RP S+S++RVDHDSAGMLA+NLPP S RS+ FGFLG   
Sbjct: 181  GNEGFTIDLFDSSLYDPAAIFRPSSLSTVRVDHDSAGMLAINLPPNSYRSLQFGFLGADP 240

Query: 1372 GYER-HDCVGKLPL---GEKKAVRDDDVDVCVKETHLVLREVHRAIFHEQVFDLVNREAF 1205
            G         K+ L    EK++V DD+   CVKETH +LREVH+AIF EQVFDLVNREAF
Sbjct: 241  GVSPIESSQTKIRLSSEAEKESVSDDE---CVKETHSLLREVHQAIFDEQVFDLVNREAF 297

Query: 1204 SPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQNWETVLIPSDTFD 1025
            + SLGVNVTGI+ENYL+L IGQG SV+ISLVP +   ++T +S   QN E  ++P DT D
Sbjct: 298  NQSLGVNVTGIQENYLQLNIGQGTSVFISLVPSRG--EQTVDSPSTQNLENTILPLDTLD 355

Query: 1024 TVRVGEQMHDT--KISKFPSSISYEIYLQQFFHENALARVKDRRPFVGRTQTVAGQPFGK 851
             + + E   DT  K S  P  IS EIYLQQ FH++   + KDR    G    V+GQ   +
Sbjct: 356  GLELAEDKPDTVKKTSLIPDQISCEIYLQQIFHQHVFVKAKDRPTSAG--ARVSGQLAKE 413

Query: 850  GIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRTSSWSLLMKVPQSI 671
            G  LLGHF  +LAHRIFSNKVL +LEN+   V YLQLL+ PTWHSRTSSW L +K+P+SI
Sbjct: 414  GPGLLGHFCMSLAHRIFSNKVLKELENVVKGVPYLQLLSHPTWHSRTSSWMLFVKIPESI 473

Query: 670  VQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSVFNGGTEKTCSLNN 491
            +    + R  ++   +N  KSQF TKVVV DDCIN+EGEGAPNVV +F G +E+ C +N 
Sbjct: 474  LH-ACQTRTSDMRHMRNITKSQFHTKVVVTDDCINVEGEGAPNVVGLFKGNSEEICLMNR 532

Query: 490  YGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELDQGDRLCLVARVDP 311
            Y  DLADLPVI+LQQVASQVI WL EEA+MVG+K +RDFLCLSFELD G+ L LVA VDP
Sbjct: 533  YDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLCLSFELDLGETLSLVAHVDP 592

Query: 310  KDTEGCISWWLVLADGLMQEGKL-RTSSNGESENVKFXXXXXXXXXXXXXXXXXXLCNGE 134
            +D EGCISWWLV+  G ++E KL   +S+G SE+ KF                  LC G 
Sbjct: 593  EDGEGCISWWLVINGGFVEERKLSMDASDGASESRKFLGHLSLEVLYSTLMDLVSLCTGR 652

Query: 133  GS 128
            G+
Sbjct: 653  GN 654


>ref|XP_008242750.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
            [Prunus mume]
          Length = 654

 Score =  744 bits (1920), Expect = 0.0
 Identities = 394/637 (61%), Positives = 473/637 (74%), Gaps = 11/637 (1%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            MDG +EI++D LPIKRLD +EE+GLE FPPD+G+++KR  LIRRIDFAWAVE        
Sbjct: 1    MDGKMEISLDKLPIKRLDVIEENGLERFPPDVGYEEKRQSLIRRIDFAWAVEKDENKKQK 60

Query: 1900 XXXXXKP---WPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKPLPSELLS 1730
                      W WQ++VENLQLAHQELSVIID INTVE NDAVTVA MTRPKP   E++S
Sbjct: 61   KSSKESAATQWQWQSMVENLQLAHQELSVIIDLINTVETNDAVTVASMTRPKPFHDEVMS 120

Query: 1729 DLSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQRTTVSTS 1550
            DL+VSAATKLQCFRHLGKYFKQSAK LE+Q+AREARFYGALIRLQ+NWKVKRQR   S S
Sbjct: 121  DLAVSAATKLQCFRHLGKYFKQSAKALERQVAREARFYGALIRLQQNWKVKRQRVAASAS 180

Query: 1549 SSEGFTIDLYDNS-SDPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIHFGFLGGRS 1373
             +EGFTIDL+D+S  DP AV+RP S+S++RVDHDSAGMLA+NLPP S RS+ FGFLG   
Sbjct: 181  GNEGFTIDLFDSSLYDPAAVFRPSSLSTVRVDHDSAGMLAINLPPNSYRSLQFGFLGADP 240

Query: 1372 GYER-HDCVGKLPL---GEKKAVRDDDVDVCVKETHLVLREVHRAIFHEQVFDLVNREAF 1205
            G         K+ L    EK++V DD+   CVKETH +LREVH+AIF EQVFDLVNREAF
Sbjct: 241  GVSPIESSQTKIRLSSEAEKESVSDDE---CVKETHSLLREVHQAIFDEQVFDLVNREAF 297

Query: 1204 SPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQNWETVLIPSDTFD 1025
            + SLGVNVTGI+ENYL+L IGQG SV+ISLVP +   ++T +S   QN E  ++P DT D
Sbjct: 298  NQSLGVNVTGIQENYLQLNIGQGTSVFISLVPSRG--EQTVDSPSTQNLENTILPLDTLD 355

Query: 1024 TVRVGEQMHDT--KISKFPSSISYEIYLQQFFHENALARVKDRRPFVGRTQTVAGQPFGK 851
             + + E   D+  K S  P  IS EIYLQQ FH++   + KDR    G    V+GQ   +
Sbjct: 356  GLELAEDKPDSVKKTSVIPDQISCEIYLQQIFHQHVFVKAKDRPTSAG--ARVSGQLAKE 413

Query: 850  GIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRTSSWSLLMKVPQSI 671
            G  LLGHF  +LAHRIFSNKVL +LEN+   V YLQLL+ PTWHSRTSSW L +K+P+SI
Sbjct: 414  GPGLLGHFCMSLAHRIFSNKVLKELENVVKGVPYLQLLSHPTWHSRTSSWMLFVKIPESI 473

Query: 670  VQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSVFNGGTEKTCSLNN 491
            +    + R  ++   +N  KSQF TKVVV DDCIN+EGEGAPNVV +F G +E+ CS+N 
Sbjct: 474  LH-ACQTRTSDMRHMRNITKSQFHTKVVVTDDCINVEGEGAPNVVGLFKGNSEEICSMNR 532

Query: 490  YGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELDQGDRLCLVARVDP 311
            Y  DLADLPVI+LQQVASQVI WL EEA+MVG+K +RDFLCLSFELD G+ L LVA VDP
Sbjct: 533  YDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLCLSFELDLGETLSLVAHVDP 592

Query: 310  KDTEGCISWWLVLADGLMQEGKL-RTSSNGESENVKF 203
            +D EGCISWWLV+  G ++E  L   +S+G SE+ KF
Sbjct: 593  EDGEGCISWWLVIDGGFVEERNLSMDASDGASESRKF 629


>ref|XP_009368825.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
            [Pyrus x bretschneideri]
          Length = 655

 Score =  736 bits (1900), Expect = 0.0
 Identities = 393/663 (59%), Positives = 477/663 (71%), Gaps = 12/663 (1%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            MDG +EI++D LPIKRL+ +EE+GLE FPPD+G+D+KR  LIRRIDFAWAVE        
Sbjct: 1    MDGKMEISLDKLPIKRLEVIEENGLERFPPDVGYDEKRQNLIRRIDFAWAVEKDENKKQK 60

Query: 1900 XXXXXKP---WPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKPLPSELLS 1730
                      W WQ++VENLQLAHQELSVIID INTVE NDAVTVA MTRPKPLP+E +S
Sbjct: 61   KSSKESAATQWQWQSMVENLQLAHQELSVIIDLINTVETNDAVTVASMTRPKPLPNEAMS 120

Query: 1729 DLSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQRTTVSTS 1550
            DL+VSAATKLQCFRHLGKYFKQSAK L++Q+AREARFYGALIRLQ+NWKVKRQR   S S
Sbjct: 121  DLAVSAATKLQCFRHLGKYFKQSAKALDRQVAREARFYGALIRLQQNWKVKRQRMAASAS 180

Query: 1549 SSEGFTIDLYDNS-SDPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIHFGFLGGRS 1373
             +EGFTIDL+DNS  DP A++RP ++S++RV+HDSAGMLA+NLPP S RS+ FGFLG   
Sbjct: 181  GNEGFTIDLFDNSLYDPAAIFRPSALSTVRVEHDSAGMLAINLPPNSFRSLQFGFLGADP 240

Query: 1372 G----YERHDCVGKLPLGEKKAVRDDDVDVCVKETHLVLREVHRAIFHEQVFDLVNREAF 1205
            G          V      EK++V DD+   CVKETH +LREVH+AIF EQVF+LVNREAF
Sbjct: 241  GDTPIESSKTKVYSSREAEKESVSDDE---CVKETHSLLREVHQAIFDEQVFNLVNREAF 297

Query: 1204 SPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQNWETVLIPSDTFD 1025
            + +LGVNVTGI+ENYL+L IG+G SV+ISL+P +   ++T +S   QN E  ++P DT D
Sbjct: 298  NQTLGVNVTGIQENYLQLNIGEGTSVFISLIPSKD--EQTADSPSTQNIENAILPLDTLD 355

Query: 1024 TVRVGE--QMHDTKI-SKFPSSISYEIYLQQFFHENALARVKDRRPFVGRTQTVAGQPFG 854
             ++  E  +    KI S  P  IS EIYLQQ FH++   + KD     G    V+GQP  
Sbjct: 356  GLQFPEDDKPETPKIKSIIPDQISCEIYLQQIFHQHVFVKAKDIPTSTG--ARVSGQPAK 413

Query: 853  KGIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRTSSWSLLMKVPQS 674
            +G  LLGHF  +LAHRIFSNKVL +LEN+   V YLQLL+ PTWHSRTSSW L +K+PQS
Sbjct: 414  EGSGLLGHFCLSLAHRIFSNKVLKELENVVKGVPYLQLLSHPTWHSRTSSWMLSVKIPQS 473

Query: 673  IVQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSVFNGGTEKTCSLN 494
            I+    + R  ++   +N  KSQF TKVVV DDCIN+EGEGAPNVV +FN  +E+ CS+N
Sbjct: 474  ILH-ACQTRASDMRHMRNVAKSQFHTKVVVTDDCINVEGEGAPNVVGLFNENSEEICSMN 532

Query: 493  NYGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELDQGDRLCLVARVD 314
             Y  DLADLPVI+LQQVA QVI WL EEA+ VG+K  RDFLCLSFELDQG+ L LVA VD
Sbjct: 533  RYDCDLADLPVIILQQVAGQVIRWLHEEALTVGIKAKRDFLCLSFELDQGETLSLVAHVD 592

Query: 313  PKDTEGCISWWLVLADGLMQEGKLR-TSSNGESENVKFXXXXXXXXXXXXXXXXXXLCNG 137
            P+D+EGCISWWLV+  G ++E KL   +S+  SE  KF                  LCNG
Sbjct: 593  PEDSEGCISWWLVIDGGFIEERKLSIDASDAASETRKFLGHLSLEVLYSTLMDLVSLCNG 652

Query: 136  EGS 128
             G+
Sbjct: 653  GGN 655


>ref|XP_008337314.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
            [Malus domestica]
          Length = 655

 Score =  735 bits (1897), Expect = 0.0
 Identities = 392/663 (59%), Positives = 477/663 (71%), Gaps = 12/663 (1%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            MDG +EI++D LPIKRL+ +EE+GLE FPPD+G+D+KR  LIRRIDFAWAVE        
Sbjct: 1    MDGKMEISLDKLPIKRLEVIEENGLERFPPDVGYDEKRQNLIRRIDFAWAVEKDENKKQK 60

Query: 1900 XXXXXKP---WPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKPLPSELLS 1730
                      W WQ++VENLQLAHQELSVIID INTVE NDAVTVA MTRPKPLP+E +S
Sbjct: 61   KSSKESAATQWQWQSMVENLQLAHQELSVIIDLINTVETNDAVTVASMTRPKPLPNEAMS 120

Query: 1729 DLSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQRTTVSTS 1550
            DL+VSAATKLQCFRHLGKYFKQSAK L++Q+AREARFYGALIRLQ+NWKVKRQR   S S
Sbjct: 121  DLAVSAATKLQCFRHLGKYFKQSAKALDRQVAREARFYGALIRLQQNWKVKRQRMAASAS 180

Query: 1549 SSEGFTIDLYDNS-SDPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIHFGFLGGRS 1373
             +EGFTIDL+DNS  DP A++RP ++S++RV+HDSAGMLA+NLPP S RS+ FGFLG   
Sbjct: 181  GNEGFTIDLFDNSLYDPAAIFRPTALSTVRVEHDSAGMLAINLPPNSFRSLQFGFLGADP 240

Query: 1372 GYERHDC----VGKLPLGEKKAVRDDDVDVCVKETHLVLREVHRAIFHEQVFDLVNREAF 1205
            G    +     V      EK++V DD+   CVKETH +LREVH+AIF EQVF+LVNREAF
Sbjct: 241  GDTSIESSKTKVYSSREAEKESVSDDE---CVKETHSLLREVHQAIFDEQVFNLVNREAF 297

Query: 1204 SPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQNWETVLIPSDTFD 1025
            + +LGVNVTGI+ENYL+L IG+G SV+ISL P +   ++T +S   QN E  ++P DT D
Sbjct: 298  NQTLGVNVTGIQENYLQLNIGEGTSVFISLXPSKD--EQTADSPSTQNIENAILPLDTLD 355

Query: 1024 TVRVGE--QMHDTKI-SKFPSSISYEIYLQQFFHENALARVKDRRPFVGRTQTVAGQPFG 854
             ++  E  +    KI S  P  IS EIYLQQ FH++   + KD     G    V+GQP  
Sbjct: 356  GLQFPEDDKPETPKIKSVIPDQISCEIYLQQIFHQHVFVKAKDIPTSTG--ARVSGQPAK 413

Query: 853  KGIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRTSSWSLLMKVPQS 674
            +G  LLGHF  +LAHRIFSNKVL +LEN+   + YLQLL+ PTWHSRTSSW L +K+PQS
Sbjct: 414  EGSGLLGHFCLSLAHRIFSNKVLKELENVVKGIPYLQLLSHPTWHSRTSSWMLSVKIPQS 473

Query: 673  IVQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSVFNGGTEKTCSLN 494
            I+    + R  ++   +N  KSQF TKVVV DDCIN+EGEGAPNVV +FN  +E+ CS+N
Sbjct: 474  ILH-ACQTRASDMRHMRNVAKSQFHTKVVVTDDCINVEGEGAPNVVGLFNENSEEICSMN 532

Query: 493  NYGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELDQGDRLCLVARVD 314
             Y  DLADLPVI+LQQVA QVI WL EEA+ VG+K  RDFLCLSFELDQG+ L LVA VD
Sbjct: 533  RYDCDLADLPVIILQQVAGQVIRWLHEEALTVGIKAKRDFLCLSFELDQGETLSLVAHVD 592

Query: 313  PKDTEGCISWWLVLADGLMQEGKLR-TSSNGESENVKFXXXXXXXXXXXXXXXXXXLCNG 137
            P+D+EGCISWWLV+  G ++E KL   +S+  SE  KF                  LCNG
Sbjct: 593  PEDSEGCISWWLVIDGGFIEERKLSIDASDAASETRKFLGHLSLEVLYSTLMDLVSLCNG 652

Query: 136  EGS 128
             G+
Sbjct: 653  GGN 655


>ref|XP_007013390.1| RNA polymerase II transcription mediators isoform 1 [Theobroma cacao]
            gi|590578008|ref|XP_007013391.1| RNA polymerase II
            transcription mediators isoform 1 [Theobroma cacao]
            gi|508783753|gb|EOY31009.1| RNA polymerase II
            transcription mediators isoform 1 [Theobroma cacao]
            gi|508783754|gb|EOY31010.1| RNA polymerase II
            transcription mediators isoform 1 [Theobroma cacao]
          Length = 663

 Score =  724 bits (1870), Expect = 0.0
 Identities = 387/667 (58%), Positives = 478/667 (71%), Gaps = 15/667 (2%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            MDGN+EI++D LP++ LDA+EE+G+E +P ++ +D+KR+ LIRRIDFAWA+E        
Sbjct: 1    MDGNLEISLDKLPVRALDAIEENGVERYPHELSYDEKRVSLIRRIDFAWALETDEERERK 60

Query: 1900 XXXXXKPWPWQT---LVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKPLPSELLS 1730
                 K     T   LVENLQLAHQELSVIID INTVEANDAVTVAGMTRPKPLP+E+LS
Sbjct: 61   KKQKKKNSKDATATWLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120

Query: 1729 DLSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQRTTVSTS 1550
            DL+VSAATKLQC+RHLGKYFKQSAK LEQQIAREARFYGALIRLQ+NWKVKRQR    +S
Sbjct: 121  DLAVSAATKLQCYRHLGKYFKQSAKALEQQIAREARFYGALIRLQQNWKVKRQRVAAPSS 180

Query: 1549 SSEGFTIDLYDNSS-DPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIHFGFLGGRS 1373
            S+EGFTIDL+DNS  D   + RP S+S I ++HDSAGMLA+NLP  SC S+HFGFLG  S
Sbjct: 181  SNEGFTIDLFDNSLYDSATISRPSSLSVIHIEHDSAGMLAINLPSNSCHSLHFGFLGVHS 240

Query: 1372 G--------YERHDCVGKLPLGEKKAVRDDDVDVCVKETHLVLREVHRAIFHEQVFDLVN 1217
                      + H  V +     +K    DD  V  KETHL+LREVH++IF++QVFD+VN
Sbjct: 241  ADIPKESSKIKTHGSVDQTTRDSQKESMSDDESV--KETHLLLREVHQSIFNDQVFDMVN 298

Query: 1216 REAFSPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQNWETVLIPS 1037
            REAF+ S GVNVTGIRENYL+L IGQG S++ISLVP  +  D+  ++ + QN E+ ++  
Sbjct: 299  REAFNQSAGVNVTGIRENYLQLSIGQGTSLFISLVPSSKGDDQAVDTANAQNLESAIVSL 358

Query: 1036 DTFDTVRVGEQMHDTKISK--FPSSISYEIYLQQFFHENALARVKDRRPFVGRTQTVAGQ 863
            D+FD V+ GE  HD    K  FP+ IS EIYLQQ  HE+A  + KDR    G    V+GQ
Sbjct: 359  DSFDDVKSGEGKHDITEKKWGFPNRISCEIYLQQIVHEHAFIKGKDRPNSSGTR--VSGQ 416

Query: 862  PFGKGIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRTSSWSLLMKV 683
                G  LLGHFS +LAHRIFSN+VL +LEN+   V YL L+T PTWHSRTSSW++ MKV
Sbjct: 417  SGKVGSGLLGHFSLSLAHRIFSNRVLMKLENVVCRVPYLHLMTHPTWHSRTSSWTIFMKV 476

Query: 682  PQSIVQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSVFNGGTEKTC 503
            PQSI+   ++ +  +  + K+ +KSQF TKVVV DD IN+EGEGAPNVV +F   +E  C
Sbjct: 477  PQSILHVESQSQKSDFQNMKDAIKSQFRTKVVVNDDRINVEGEGAPNVVGLFKRSSEDIC 536

Query: 502  SLNNYGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELDQGDRLCLVA 323
            S+N Y  DLADLPVI+LQQVASQVI WL EEA+MVG+K +RDFLCL+FEL+QG+ + LVA
Sbjct: 537  SVNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKTNRDFLCLTFELEQGETVSLVA 596

Query: 322  RVDPKDTEGCISWWLVLADGLMQEGKLRTS-SNGESENVKFXXXXXXXXXXXXXXXXXXL 146
             VDP+D +GCISWWLV+ DG  ++ KL+   S+G SE  KF                  L
Sbjct: 597  HVDPEDIQGCISWWLVMEDGFAEDWKLQMDMSDGASEYRKFLGHLSLDVLYSTLMDLVSL 656

Query: 145  CNGEGSH 125
            C G G+H
Sbjct: 657  CGGGGNH 663


>ref|XP_010093735.1| hypothetical protein L484_006289 [Morus notabilis]
            gi|587864949|gb|EXB54541.1| hypothetical protein
            L484_006289 [Morus notabilis]
          Length = 701

 Score =  723 bits (1867), Expect = 0.0
 Identities = 380/645 (58%), Positives = 471/645 (73%), Gaps = 19/645 (2%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            M+  +++++D LP+KRLD +EE+G E FP D+G+D+KRL LIRRIDFAWAVE        
Sbjct: 1    MNEKVQVSLDKLPVKRLDVIEENGAERFPSDVGYDEKRLSLIRRIDFAWAVEKDEKKKQK 60

Query: 1900 XXXXXK--PWPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKPLPSELLSD 1727
                    PWPWQT+VENLQLA QELSVI+D INTVEANDAVTVAGMTRPKPLP+E+LSD
Sbjct: 61   KSAKESLTPWPWQTMVENLQLAQQELSVIVDLINTVEANDAVTVAGMTRPKPLPNEVLSD 120

Query: 1726 LSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQRTTVSTSS 1547
            L+VSAA KLQ FR LGKYFKQSAK LEQQ+ REARFYGALIRLQ+NWKVKRQR   + S 
Sbjct: 121  LAVSAAIKLQGFRSLGKYFKQSAKALEQQVVREARFYGALIRLQQNWKVKRQRIAAAASG 180

Query: 1546 SEGFTIDLYDNS-SDPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIHFGFLGGRSG 1370
            +EGFTIDL+DNS  DP +VYRP  +S +RV+HD AGMLA+NLPP SCRS+ FGF G    
Sbjct: 181  NEGFTIDLFDNSLYDPASVYRPTFLSMVRVEHDPAGMLAINLPPNSCRSLQFGFFG---- 236

Query: 1369 YERHDC----VGKLPLG--------EKKAVRDDDVDVCVKETHLVLREVHRAIFHEQVFD 1226
               H C      K  +G        EK+A  DD+   C+KETHL+LR+VH++IF E+VFD
Sbjct: 237  --VHPCDNTEPNKTKVGSSVHSRETEKEAANDDE---CIKETHLLLRQVHQSIFDEKVFD 291

Query: 1225 LVNREAFSPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQNWETVL 1046
            LVNREAF+ SLGVNVTGIRENYL+L IG G SV+ISLV   QD D+T +    Q+ E  +
Sbjct: 292  LVNREAFNQSLGVNVTGIRENYLQLSIGLGNSVFISLVSSNQD-DQTGDDAGNQDIENAI 350

Query: 1045 IPSDTFDTVRVGEQMHDTKISK---FPSSISYEIYLQQFFHENALARVKDRRPFVGRTQT 875
            +P D+ D V++ E+      +K    P  IS EIYLQQ FHE+  +R KD+   V     
Sbjct: 351  LPLDSLDGVKLPEEDKQDTFNKELGTPDYISCEIYLQQLFHEHVFSRAKDKP--VSTVSR 408

Query: 874  VAGQPFGKGIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRTSSWSL 695
            V+GQP  +G  LLGHF  +LAHRIFS KVL  LENL + VSYLQLL+ PTW+SRTSSW++
Sbjct: 409  VSGQPAKEGPSLLGHFCLSLAHRIFSKKVLVVLENLVSGVSYLQLLSHPTWNSRTSSWTI 468

Query: 694  LMKVPQSIVQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSVFNGGT 515
             MK+PQSI+ GG+  +  ++H  K+  KSQF TKVV+ DD I++EGEGAPNVV +F G  
Sbjct: 469  FMKIPQSILHGGSH-QTSDLHHMKSTTKSQFRTKVVIKDDFISVEGEGAPNVVGLFKGSA 527

Query: 514  EKTCSLNNYGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELDQGDRL 335
            ++  S+N Y  +L DLPVI+LQQVA Q++ WL EEA+MVG+KV+RDFL LSFEL+QG+ L
Sbjct: 528  QEVSSMNRYECNLEDLPVIILQQVAGQIVRWLHEEALMVGIKVNRDFLSLSFELEQGETL 587

Query: 334  CLVARVDPKDTEGCISWWLVLADGLMQEGKLRTS-SNGESENVKF 203
             L+A VDP+D +GCISWWLV+ DG  +EGKL    S+G SE  +F
Sbjct: 588  TLLAHVDPEDAQGCISWWLVMEDGFTEEGKLHMDLSDGVSEYRRF 632


>ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
            [Fragaria vesca subsp. vesca]
          Length = 655

 Score =  723 bits (1866), Expect = 0.0
 Identities = 387/660 (58%), Positives = 472/660 (71%), Gaps = 12/660 (1%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            MDG +EI++D LPIKRLD +EE+GLE FPP++G+++KR  LIRRIDFAWAVE        
Sbjct: 1    MDGKLEISLDKLPIKRLDVIEENGLERFPPEVGYEEKRESLIRRIDFAWAVEKDDKSKQK 60

Query: 1900 XXXXXKP----WPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKPLPSELL 1733
                       W +Q++V+NL LAHQELSVI+D INTVEANDAVTVA MTRP+P P+E L
Sbjct: 61   KRSRETSAPAQWEFQSMVDNLHLAHQELSVIVDLINTVEANDAVTVASMTRPRPFPNEAL 120

Query: 1732 SDLSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQRTTVST 1553
            SDL+VSAATKLQCFRHLGKYFKQSA  LEQQ+AREARFYGALIRLQ+NWKVKRQR     
Sbjct: 121  SDLAVSAATKLQCFRHLGKYFKQSANALEQQMAREARFYGALIRLQQNWKVKRQRAVALA 180

Query: 1552 SSSEGFTIDLYDNS-SDPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIHFGFLGGR 1376
            S +EGFTIDL+DNS  DP  ++RP  +S++ VDHDSAGMLA+NLPPKS RS+ FGF+   
Sbjct: 181  SGNEGFTIDLFDNSLYDPAGIFRPSPLSTVCVDHDSAGMLAINLPPKSYRSLRFGFISAY 240

Query: 1375 SGYERHDC----VGKLPLGEKKAVRDDDVDVCVKETHLVLREVHRAIFHEQVFDLVNREA 1208
            +     +            +K++V DD+   CVKETH +LREVH+AIF EQVFDLVNREA
Sbjct: 241  TDDTPTESSKTKTQSSSDADKESVSDDE---CVKETHSLLREVHQAIFSEQVFDLVNREA 297

Query: 1207 FSPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQNWETVLIPSDTF 1028
             + SLGVNVTGI+ENYL+L I Q  SV+ISLVP  Q  +ET +S   QN E  ++P DT 
Sbjct: 298  CNQSLGVNVTGIQENYLQLNIDQDTSVFISLVPTNQG-EETVDSPSTQNLENAILPLDTL 356

Query: 1027 DTVRVGEQMHDT--KISKFPSSISYEIYLQQFFHENALARVKDRRPFVGRTQTVAGQPFG 854
            D + + E   DT  K S  P+ IS EIYL Q FH++   + KDR    G    V+GQP  
Sbjct: 357  DGLNLPEDKPDTPKKKSIIPNQISCEIYLLQIFHQHVFLKAKDRPTSGG---GVSGQPAK 413

Query: 853  KGIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRTSSWSLLMKVPQS 674
            +G  LLGHF  +LAHRIFSNKVL +LEN+   V Y+QL + PTWHSRTSSW+L++K+PQS
Sbjct: 414  EGSGLLGHFCMSLAHRIFSNKVLMELENVVRGVPYMQLTSHPTWHSRTSSWTLVVKIPQS 473

Query: 673  IVQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSVFNGGTEKTCSLN 494
            I+    +IR  + H  K+  KSQF TKVVV DDCINI+GEGAPNVV +F G +++ CS+N
Sbjct: 474  ILH-ACQIRVSDSHHTKHVTKSQFHTKVVVTDDCINIDGEGAPNVVGLFKGTSQEVCSMN 532

Query: 493  NYGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELDQGDRLCLVARVD 314
             Y  DLADL VI+LQQVASQVI WL EEA+MVG+K + DFLCLSFEL+QG+ L LVA VD
Sbjct: 533  RYDCDLADLSVIILQQVASQVIRWLHEEALMVGLKANWDFLCLSFELEQGETLSLVAHVD 592

Query: 313  PKDTEGCISWWLVLADGLMQEGKLRTS-SNGESENVKFXXXXXXXXXXXXXXXXXXLCNG 137
            P+DTEGCISWWLV+ DG ++E KL    S+G SE+ KF                  LCNG
Sbjct: 593  PEDTEGCISWWLVMEDGFVEERKLNIDISDGASESRKFLGHLSLEVLYSTMMDLVGLCNG 652


>ref|XP_012078751.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like isoform X1 [Jatropha curcas]
            gi|643722631|gb|KDP32381.1| hypothetical protein
            JCGZ_13306 [Jatropha curcas]
          Length = 664

 Score =  722 bits (1864), Expect = 0.0
 Identities = 380/671 (56%), Positives = 476/671 (70%), Gaps = 19/671 (2%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            MDG IEI+ID LP+KRL+A++E+G E FP D+G+D+KR+ LIRRIDFAWAVE        
Sbjct: 1    MDGKIEISIDKLPVKRLEAIDENGAERFPTDVGYDEKRVSLIRRIDFAWAVEKEDEEKKK 60

Query: 1900 XXXXXK-------PWPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKPLPS 1742
                         PWPWQ++VENLQLAHQELS+IID INTVEANDAVTV  MTRPKPLP+
Sbjct: 61   KQKKSAKESSSTTPWPWQSMVENLQLAHQELSIIIDLINTVEANDAVTVNSMTRPKPLPN 120

Query: 1741 ELLSDLSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQRTT 1562
            E L+DL+VS ATKLQC+RHLGKYFKQSAK LEQQ+AREARFYGALIRLQ+NWKVKRQR  
Sbjct: 121  EHLADLAVSTATKLQCYRHLGKYFKQSAKALEQQVAREARFYGALIRLQQNWKVKRQRVA 180

Query: 1561 VSTSSSEGFTIDLYDNSS-DPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIHFGFL 1385
                 +EGFTIDL+DNS  D  +++RP S+S+IR+DHDSAGMLA++LPPKSCRS+HFGFL
Sbjct: 181  AIAPGNEGFTIDLFDNSLYDSASLFRPTSLSTIRIDHDSAGMLAIDLPPKSCRSLHFGFL 240

Query: 1384 GGRSGYE---------RHDCVGKLPLGEKKAVRDDDVDVCVKETHLVLREVHRAIFHEQV 1232
            G  S  +          +         EK++  D++    +KETHL+LR VH+AIF EQV
Sbjct: 241  GVHSNEDVKKSSKIKSSYSVEHPSKETEKESASDNE---SIKETHLLLRRVHQAIFDEQV 297

Query: 1231 FDLVNREAFSPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQNWET 1052
            FD+VNREAF+ SLGVNVTGI+ENYL+L I  G SV++SLVP  +D ++T +    Q  ET
Sbjct: 298  FDMVNREAFNQSLGVNVTGIQENYLQLSISTGTSVFLSLVPSVED-EQTADGGGHQISET 356

Query: 1051 VLIPSDTFDTVRVGEQMHDT--KISKFPSSISYEIYLQQFFHENALARVKDRRPFVGRTQ 878
             ++P D+ D V++ E+ H    K S+FP+ IS EIYLQQ FHE+   + KDR P    T+
Sbjct: 357  AVLPLDSIDEVKLPEEKHVYLHKKSRFPNRISCEIYLQQIFHEHVFLKAKDR-PLPTGTR 415

Query: 877  TVAGQPFGKGIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRTSSWS 698
              +    G G  LLGHF  T+AHRIFSNKVL +LEN+   V YL L++ PTWHSRTSSW+
Sbjct: 416  VSSQLKDGSG--LLGHFCMTVAHRIFSNKVLMELENVICKVPYLHLISHPTWHSRTSSWT 473

Query: 697  LLMKVPQSIVQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSVFNGG 518
            + MKVPQSI+   +  +  ++ S K+++K++F TKVVV DD IN+E EGAPNVV +F G 
Sbjct: 474  IFMKVPQSILHASSHSQTSDMKSMKSDIKTEFRTKVVVNDDSINVEAEGAPNVVGLFKGS 533

Query: 517  TEKTCSLNNYGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELDQGDR 338
            ++ TCS+N Y  DLADLP I+LQQVASQVI WL EEA+ VG+K +RDFL LSFELDQG+ 
Sbjct: 534  SDDTCSMNKYDCDLADLPAIILQQVASQVIRWLHEEALTVGIKANRDFLSLSFELDQGEV 593

Query: 337  LCLVARVDPKDTEGCISWWLVLADGLMQEGKLRTSSNGESENVKFXXXXXXXXXXXXXXX 158
            L +VA VDP+D EGCISWWLV+ DG  ++      ++  SE  KF               
Sbjct: 594  LSMVAHVDPEDVEGCISWWLVMEDGFAEKKLHMDIADDASECRKFLGYLPLDVLYSTLMD 653

Query: 157  XXXLCNGEGSH 125
               LC+G GSH
Sbjct: 654  LVTLCSGGGSH 664


>ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citrus clementina]
            gi|557554196|gb|ESR64210.1| hypothetical protein
            CICLE_v10007689mg [Citrus clementina]
          Length = 657

 Score =  714 bits (1843), Expect = 0.0
 Identities = 377/639 (58%), Positives = 454/639 (71%), Gaps = 14/639 (2%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            M+GN+EI++D LP+KRLDA+EE+G E FPPD+G+D+KR  LIRRIDFAWAVE        
Sbjct: 1    MNGNLEISVDKLPVKRLDAIEETGAERFPPDVGYDEKRESLIRRIDFAWAVEKDDNKRLK 60

Query: 1900 XXXXXK-------PWPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKPLPS 1742
                         PW WQ +VENLQ AHQELSVIID INTVEANDAVTVAGMTRPK LP+
Sbjct: 61   KRSKESSSSATTTPWQWQNMVENLQFAHQELSVIIDLINTVEANDAVTVAGMTRPKALPN 120

Query: 1741 ELLSDLSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQRTT 1562
            E+LSDLSVSAATKLQC+RHLG YFKQSAK LEQQIA+EARFYGALIRLQ+NWKVKRQR  
Sbjct: 121  EVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQNWKVKRQRVA 180

Query: 1561 VSTSSSEGFTIDLYDNS-SDPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIHFGFL 1385
               S +EGFTIDL+DNS  D   V RP S+S+IR+DHDSAGMLA+NLPP SCRS  FGFL
Sbjct: 181  APASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNSCRSFRFGFL 240

Query: 1384 GGRSGYERHDCV----GKLPLGEKKAVRDDDVDVCVKETHLVLREVHRAIFHEQVFDLVN 1217
            G +SG     C        P   K+A    + D CV+E H +LREVH+AIF+EQVFD+VN
Sbjct: 241  GVQSGDSSKQCSKVKNSCSPRPSKEAKESVNDDECVREKHSLLREVHQAIFYEQVFDIVN 300

Query: 1216 REAFSPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQNWETVLIPS 1037
            REAF  SLGVNVTGIRENYL+LGIG G S+++SL+P  Q  D + +S   QN E+ ++P 
Sbjct: 301  REAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQG-DLSVDSWVNQNVESGILPL 359

Query: 1036 DTFDTVRVGEQMHD--TKISKFPSSISYEIYLQQFFHENALARVKDRRPFVGRTQTVAGQ 863
            D+ D V++ E+  D   K   +P+ ++YEIYLQQ FHE    R K++    G    V+G 
Sbjct: 360  DSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPISTG--TRVSGP 417

Query: 862  PFGKGIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRTSSWSLLMKV 683
            P   G  LLGHF  +LAHRIFSNKV  +LEN    V YL L++ PTWHSRTSSW++ +KV
Sbjct: 418  PTKDGSGLLGHFCLSLAHRIFSNKVRVELENAVCGVPYLHLVSHPTWHSRTSSWTVFLKV 477

Query: 682  PQSIVQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSVFNGGTEKTC 503
            PQSI+   +  R           KS F T VVV DDCI++EGEG PNVV +F G +E   
Sbjct: 478  PQSILHAESNSR------TAETAKSHFRTNVVVNDDCIHVEGEGTPNVVGLFEGRSEDMS 531

Query: 502  SLNNYGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELDQGDRLCLVA 323
            S+N Y  DLADLPVI+LQQVASQVI WL EEA+MVG+K +RDFL LSFELDQG+ + LVA
Sbjct: 532  SMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSFELDQGETVSLVA 591

Query: 322  RVDPKDTEGCISWWLVLADGLMQEGKLRTSSNGESENVK 206
             VDP+D  GCISWWLV+ DG   E KL    + ++ + K
Sbjct: 592  HVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYK 630


>ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Citrus sinensis] gi|641861599|gb|KDO80287.1|
            hypothetical protein CISIN_1g006207mg [Citrus sinensis]
          Length = 657

 Score =  714 bits (1842), Expect = 0.0
 Identities = 377/639 (58%), Positives = 454/639 (71%), Gaps = 14/639 (2%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            M+GN+EI++D LP+KRLDA+EE+G E FPPD+G+D+KR  LIRRIDFAWAVE        
Sbjct: 1    MNGNLEISVDKLPVKRLDAIEETGAERFPPDVGYDEKRESLIRRIDFAWAVEKDDNKRLK 60

Query: 1900 XXXXXK-------PWPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKPLPS 1742
                         PW WQ +VENLQ AHQELSVIID INTVEANDAVTVAGMTRPK LP+
Sbjct: 61   KSSKESSSSATTTPWQWQNMVENLQFAHQELSVIIDLINTVEANDAVTVAGMTRPKALPN 120

Query: 1741 ELLSDLSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQRTT 1562
            E+LSDLSVSAATKLQC+RHLG YFKQSAK LEQQIA+EARFYGALIRLQ+NWKVKRQR  
Sbjct: 121  EVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQNWKVKRQRVA 180

Query: 1561 VSTSSSEGFTIDLYDNS-SDPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIHFGFL 1385
               S +EGFTIDL+DNS  D   V RP S+S+IR+DHDSAGMLA+NLPP SCRS  FGFL
Sbjct: 181  APASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNSCRSFRFGFL 240

Query: 1384 GGRSGYERHDCV----GKLPLGEKKAVRDDDVDVCVKETHLVLREVHRAIFHEQVFDLVN 1217
            G +SG     C        P   K+A    + D CV+E H +LREVH+AIF+EQVFD+VN
Sbjct: 241  GVQSGDSSKQCSKVKNSCSPRPSKEAKESVNDDECVREKHSLLREVHQAIFYEQVFDIVN 300

Query: 1216 REAFSPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQNWETVLIPS 1037
            REAF  SLGVNVTGIRENYL+LGIG G S+++SL+P  Q  D + +S   QN E+ ++P 
Sbjct: 301  REAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQG-DLSVDSWVNQNVESGILPL 359

Query: 1036 DTFDTVRVGEQMHD--TKISKFPSSISYEIYLQQFFHENALARVKDRRPFVGRTQTVAGQ 863
            D+ D V++ E+  D   K   +P+ ++YEIYLQQ FHE    R K++    G    V+G 
Sbjct: 360  DSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPISTG--TRVSGP 417

Query: 862  PFGKGIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRTSSWSLLMKV 683
            P   G  LLGHF  +LAHRIFSNKV  +LEN    V YL L++ PTWHSRTSSW++ +KV
Sbjct: 418  PTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPTWHSRTSSWTVFLKV 477

Query: 682  PQSIVQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSVFNGGTEKTC 503
            PQSI+   +  R           KS F T VVV DDCI++EGEG PNVV +F G +E   
Sbjct: 478  PQSILHAESNSR------TAETAKSHFRTNVVVNDDCIHVEGEGTPNVVGLFKGRSEDMS 531

Query: 502  SLNNYGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELDQGDRLCLVA 323
            S+N Y  DLADLPVI+LQQVASQVI WL EEA+MVG+K +RDFL LSFELDQG+ + LVA
Sbjct: 532  SMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSFELDQGETVSLVA 591

Query: 322  RVDPKDTEGCISWWLVLADGLMQEGKLRTSSNGESENVK 206
             VDP+D  GCISWWLV+ DG   E KL    + ++ + K
Sbjct: 592  HVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYK 630


>ref|XP_006374395.1| hypothetical protein POPTR_0015s06780g [Populus trichocarpa]
            gi|550322157|gb|ERP52192.1| hypothetical protein
            POPTR_0015s06780g [Populus trichocarpa]
          Length = 667

 Score =  713 bits (1840), Expect = 0.0
 Identities = 377/676 (55%), Positives = 478/676 (70%), Gaps = 24/676 (3%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            MDG +E+++D LP+KRL+++EE+G E FP DIG+D+K++ LIRRIDFAWAVE        
Sbjct: 1    MDGKLEMSLDKLPVKRLESIEENGFERFPTDIGYDEKQVALIRRIDFAWAVEKEDKEKKQ 60

Query: 1900 XXXXXK----------PWPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKP 1751
                 K          PWPWQ +VENL LAHQELSVIID INTVEANDAVTVAGMTRPKP
Sbjct: 61   KKKQKKSSRESSSTTTPWPWQNMVENLHLAHQELSVIIDLINTVEANDAVTVAGMTRPKP 120

Query: 1750 LPSELLSDLSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQ 1571
            LP+E+L+DL+VS ATKLQC+R+LGKYFKQSAK LEQQ+AREARFYGALIRLQ+NWKVKRQ
Sbjct: 121  LPNEILADLAVSTATKLQCYRNLGKYFKQSAKALEQQVAREARFYGALIRLQQNWKVKRQ 180

Query: 1570 RTTVSTSSSEGFTIDLYDNSS-DPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIHF 1394
            R       +EGF IDL+DNS  D +AV++P S+S+IR+DHDS GMLA+NLP KSC S+ F
Sbjct: 181  RVAAIAPGNEGFMIDLFDNSLYDSVAVFQPSSLSTIRIDHDSDGMLAINLPSKSCHSLVF 240

Query: 1393 GFLGGRSGYER-------HDCV---GKLPLGEKKAVRDDDVDVCVKETHLVLREVHRAIF 1244
            GFL G S   +       H  +    K P  EK+++ D++   CVK+THL+LR+VHR IF
Sbjct: 241  GFLSGHSNVPKKSNKIKTHGSLKNPSKNP--EKESLSDNE---CVKDTHLLLRKVHRTIF 295

Query: 1243 HEQVFDLVNREAFSPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQ 1064
             EQVFD+VNR A + S G+NVTGI+ENYL+L IG G S++IS+VP  Q  D+  +S+  +
Sbjct: 296  DEQVFDMVNRGAVNQSSGLNVTGIQENYLQLCIGPGISIFISIVPSDQG-DQAIDSEGPE 354

Query: 1063 NWETVLIPSDTFDTVRVGEQMHD--TKISKFPSSISYEIYLQQFFHENALARVKDRRPFV 890
            N E+ ++P D+FD V++ E+ H+  TK  +FP+ I+YEIYL+Q FHE      K R  F 
Sbjct: 355  NLESAVVPLDSFDGVKLAEEKHNSLTKKPRFPNCITYEIYLKQIFHEYVFVEAKGRPSFT 414

Query: 889  GRTQTVAGQPFGKGIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRT 710
            G    + GQP   G  LL HF  +L+HRI SNKVL +LEN+   V YL L++ PTWHSR+
Sbjct: 415  GTR--MPGQPANDGSGLLSHFCLSLSHRIISNKVLMELENVVCRVPYLHLISHPTWHSRS 472

Query: 709  SSWSLLMKVPQSIVQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSV 530
            S+W++ MK+P SI+   ++ R  +I + KN VKS+F TKVVV DDCINIE EGAPNVV +
Sbjct: 473  SAWTIFMKIPPSILHASSQTRTPDIQNMKNVVKSEFWTKVVVHDDCINIEAEGAPNVVGL 532

Query: 529  FNGGTEKTCSLNNYGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELD 350
            F   ++  CS N Y  +L DLPVI+LQQVASQVI WL EEA+ VG+K +RDFLCLSFEL+
Sbjct: 533  FKDSSDDKCSTNKYDCNLDDLPVIILQQVASQVIRWLHEEALAVGIKANRDFLCLSFELE 592

Query: 349  QGDRLCLVARVDPKDTEGCISWWLVLADGLMQEGKLRTS-SNGESENVKFXXXXXXXXXX 173
            QG+ L LVA VDP+DT+GCISWWL + DG  +E KL  + ++G SE  KF          
Sbjct: 593  QGEILNLVAHVDPEDTQGCISWWLTMEDGFAEEKKLHMNIADGASEYRKFLGYLPLDVLY 652

Query: 172  XXXXXXXXLCNGEGSH 125
                    LC G GSH
Sbjct: 653  STLMDLVSLCGG-GSH 667


>gb|KHG17744.1| mediator of rna polymerase ii transcription subunit 17 [Gossypium
            arboreum]
          Length = 664

 Score =  709 bits (1830), Expect = 0.0
 Identities = 380/672 (56%), Positives = 478/672 (71%), Gaps = 20/672 (2%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            MDGN+EI++D LPIKRLD++EE+G+E +P D  +D+KR+ LIRRIDFAWAVE        
Sbjct: 1    MDGNLEISLDKLPIKRLDSIEENGVERYPSDSSYDEKRVSLIRRIDFAWAVEDDEERERK 60

Query: 1900 XXXXXKP------WPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKPLPSE 1739
                         W WQ++VENLQLAHQELSVIID INTVEANDAVTVAGMTRPKPLP+E
Sbjct: 61   KRQKKSSKDASATWQWQSMVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNE 120

Query: 1738 LLSDLSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQRTTV 1559
            +LSDL+VSAATKLQC+R LGKYFKQSAK LE+QIAREARFYGALIRLQ+NWKVKRQR   
Sbjct: 121  VLSDLAVSAATKLQCYRQLGKYFKQSAKALEEQIAREARFYGALIRLQQNWKVKRQRLAA 180

Query: 1558 STSSSEGFTIDLYDNSS-DPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIHFGFLG 1382
            + SSSEGF IDL+DNS  D  A+ RP S+S+IRVDHDSAGMLA+NLPP SCRS+HFGFLG
Sbjct: 181  AASSSEGFIIDLFDNSLYDSAAMCRPSSLSTIRVDHDSAGMLAINLPPNSCRSLHFGFLG 240

Query: 1381 GRSGYERHDCVGKLPLG----------EKKAVRDDDVDVCVKETHLVLREVHRAIFHEQV 1232
              S     + +GK+             EK+++ DD+    +KETH +LREVH++IF +QV
Sbjct: 241  VHSADIPKE-LGKIRTRGSVEQHTREHEKESMSDDEY---IKETHTLLREVHQSIFDDQV 296

Query: 1231 FDLVNREAFSPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQNWET 1052
            F+++NREAF+ S+GVNVTGIRENYL+L IGQG +++ISLVP  +  D+  ++ + Q+ E+
Sbjct: 297  FEMLNREAFNQSIGVNVTGIRENYLQLSIGQGNTLFISLVPSSKGDDQ--DTANTQDSES 354

Query: 1051 VLIPSDTFDTVRVGEQMHDTKISK--FPSSISYEIYLQQFFHENALARVKDRRPFVGRTQ 878
             ++P D+FD V+  E  H T   K  FP+  S EIYLQQ  HE+A  + KD+    G   
Sbjct: 355  AIVPLDSFDNVKFEEGKHGTPKRKWGFPNRTSCEIYLQQIVHEHAFVKAKDKPNLSGTR- 413

Query: 877  TVAGQPFGKGIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRTSSWS 698
             V+GQ    G  LLGHF  +LAHRIFSN+VL +LEN+   V YL L+T PTWHS+ SSW+
Sbjct: 414  -VSGQSGKDGPGLLGHFCLSLAHRIFSNRVLVELENVVCRVPYLHLMTHPTWHSQASSWT 472

Query: 697  LLMKVPQSIVQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSVFNGG 518
            + +KVPQSI+   ++    +  + K+ VKSQF TKVVV DD IN+EGEGAPNVVS+F   
Sbjct: 473  IFLKVPQSILHAESQSLKSDFQNMKDAVKSQFRTKVVVNDDRINVEGEGAPNVVSLFKRS 532

Query: 517  TEKTCSLNNYGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELDQGDR 338
            +E   S+N Y  DLADLPVI+L Q ASQVICWL EEA+MVG+K +RDFLCL+FEL+QGD 
Sbjct: 533  SENISSVNKYECDLADLPVIILLQAASQVICWLHEEALMVGIKTNRDFLCLTFELEQGDT 592

Query: 337  LCLVARVDPKDTEGCISWWLVLADGLMQEGKLRTSS-NGESENVKFXXXXXXXXXXXXXX 161
            + LVA V+P+D +G I+WWLV+ DG   + KL+    +G SE  KF              
Sbjct: 593  VSLVAHVNPEDIKGGIAWWLVMEDGSTDDWKLQMDMYDGASEYRKFLGHLTLDVLYSTLM 652

Query: 160  XXXXLCNGEGSH 125
                LC G  +H
Sbjct: 653  DLVSLCGGGRNH 664


>ref|XP_011007274.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
            [Populus euphratica] gi|743926234|ref|XP_011007275.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 17 [Populus euphratica]
            gi|743926236|ref|XP_011007276.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 17 [Populus
            euphratica]
          Length = 667

 Score =  707 bits (1826), Expect = 0.0
 Identities = 371/671 (55%), Positives = 471/671 (70%), Gaps = 19/671 (2%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            MDG +E+++D LP+KRL+++EE+G+E FP DIG+D+K++ LIRRIDFAWA+E        
Sbjct: 1    MDGKLEMSLDKLPVKRLESIEENGVERFPTDIGYDEKQVSLIRRIDFAWALEKEDKEKKQ 60

Query: 1900 XXXXXK----------PWPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKP 1751
                 K          PWPWQ +VENL LAHQEL+VI+D I+TVEANDAVTVAGMTRPKP
Sbjct: 61   KKKQKKSSRESSSTTTPWPWQNMVENLHLAHQELTVIVDLIHTVEANDAVTVAGMTRPKP 120

Query: 1750 LPSELLSDLSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQ 1571
            LP+E+L+DL+VS ATKLQC+R+LGKYFKQSAK LEQQ+AREARFYGALIRLQ+NWKVKRQ
Sbjct: 121  LPNEILADLAVSTATKLQCYRNLGKYFKQSAKALEQQVAREARFYGALIRLQQNWKVKRQ 180

Query: 1570 RTTVSTSSSEGFTIDLYDNSS-DPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIHF 1394
            R       +EGF IDL+DNS  D +AV+ P S+S+IR+DHDS GMLA+NLP KSC S+ F
Sbjct: 181  RVAAIAPGNEGFMIDLFDNSLYDSVAVFHPSSLSTIRIDHDSDGMLAINLPSKSCHSLLF 240

Query: 1393 GFLGGRSGYERHD----CVGKLPLGEKKAVRDDDVD-VCVKETHLVLREVHRAIFHEQVF 1229
            GFL G S   +        G L    KK  ++   D  CVK+THL+LR+VHR IF EQVF
Sbjct: 241  GFLSGHSNVPKKSNKIKTHGSLKNPSKKPEKESLSDNECVKDTHLLLRKVHRTIFDEQVF 300

Query: 1228 DLVNREAFSPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQNWETV 1049
            D+VNR A + S G+NVTGI+ENYL+L IG G S++IS+VP  Q  D+  +S+  +N E  
Sbjct: 301  DMVNRGAVNQSSGLNVTGIQENYLQLCIGPGISIFISIVPSDQG-DQAIDSEGPENLEPA 359

Query: 1048 LIPSDTFDTVRVGEQMHD--TKISKFPSSISYEIYLQQFFHENALARVKDRRPFVGRTQT 875
            ++P D+FD V++ E+ H+  TK   FP+ I+YEIYL+Q FHE      K R  F   +  
Sbjct: 360  VVPLDSFDGVKLAEEKHNSLTKKPSFPNCITYEIYLKQIFHEYVFVEAKGRPSFT--STR 417

Query: 874  VAGQPFGKGIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRTSSWSL 695
            + GQP   G  LL HF  +L+HRI SNKVL +LEN+   V YL L++ PTWHSR+S+W++
Sbjct: 418  MPGQPANDGSGLLSHFCLSLSHRIISNKVLMELENVVCRVPYLHLISHPTWHSRSSAWTI 477

Query: 694  LMKVPQSIVQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSVFNGGT 515
             MK+P SI+   ++ R  +I + KN VKS+F TK+VV DDCINIE EGAPNVV +F   +
Sbjct: 478  FMKIPPSILHASSQARTPDIQNMKNVVKSEFWTKIVVHDDCINIEAEGAPNVVGLFKDSS 537

Query: 514  EKTCSLNNYGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELDQGDRL 335
            +  CS N Y  +L DLPVI+LQQVASQVI WL EEA+ VG+K +RDFLCLSFELDQG+ L
Sbjct: 538  DDICSTNKYDCNLDDLPVIILQQVASQVIRWLHEEALAVGIKANRDFLCLSFELDQGEIL 597

Query: 334  CLVARVDPKDTEGCISWWLVLADGLMQEGKLRTS-SNGESENVKFXXXXXXXXXXXXXXX 158
             LVA VDP+DT+GCISWWL + DG  +E KL  + ++G SE  KF               
Sbjct: 598  NLVAHVDPEDTQGCISWWLTMEDGFAEEKKLHMNIADGASEYRKFLGYLPLDVLYSTLMD 657

Query: 157  XXXLCNGEGSH 125
               LC G GSH
Sbjct: 658  LVSLCGG-GSH 667


>ref|XP_012445472.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like isoform X1 [Gossypium raimondii]
            gi|763787064|gb|KJB54060.1| hypothetical protein
            B456_009G019100 [Gossypium raimondii]
            gi|763787065|gb|KJB54061.1| hypothetical protein
            B456_009G019100 [Gossypium raimondii]
          Length = 671

 Score =  707 bits (1824), Expect = 0.0
 Identities = 377/652 (57%), Positives = 475/652 (72%), Gaps = 26/652 (3%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            MDGN+EI++D LP+KRLDA+EE+GLE +PP+  +D+KR+ LIRRIDFAWAVE        
Sbjct: 1    MDGNLEISLDKLPVKRLDAIEENGLERYPPESSYDEKRVSLIRRIDFAWAVEEDEEKERK 60

Query: 1900 XXXXXKP-------WPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKPLPS 1742
                          W WQ++VENLQLAHQELSVIID INTVEANDAVTVAGMTRPKPLP+
Sbjct: 61   KKQKKNSSKDASATWQWQSMVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPN 120

Query: 1741 ELLSDLSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQRTT 1562
            EL+SDL+VSAATKLQC+RHLGKYFKQSA  LEQQIAREARFYGALIRLQ+NWKVKRQR  
Sbjct: 121  ELMSDLAVSAATKLQCYRHLGKYFKQSANALEQQIAREARFYGALIRLQQNWKVKRQRVA 180

Query: 1561 VS--TSSSEGFTIDLYDNS---SDPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIH 1397
                 SS+EGFTIDL+DNS   S PM+  RP S+SSIRV+HDSAGML++NLPP SC S+H
Sbjct: 181  GPGPASSNEGFTIDLFDNSLYSSTPMS--RPSSLSSIRVEHDSAGMLSINLPPNSCHSLH 238

Query: 1396 FGFLGGRSG--------YERHDCVGKLPLG-EKKAVRDDDVDVCVKETHLVLREVHRAIF 1244
            FGFLG  S            H  VG+     EK+++ DD+    VKETHL+LR+VH++IF
Sbjct: 239  FGFLGVHSADIPKEFNKIRTHGSVGQHTRNTEKESMSDDEY---VKETHLLLRDVHQSIF 295

Query: 1243 HEQVFDLVNREAFSPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQ 1064
            ++QVFD++N EAF+ S+GVNVTG+RENYL+L IGQG S++ISLVP  +  ++  ++ + Q
Sbjct: 296  NDQVFDMLNCEAFNQSVGVNVTGMRENYLQLSIGQGTSLFISLVPSSEGDNQAVDTANMQ 355

Query: 1063 NWETVLIPSDTFDTVRVGEQMHDTKISK----FPSSISYEIYLQQFFHENALARVKDRRP 896
            N ++ ++P D+F+ V+ GE+ HDT   K    FP  IS EIYLQQ  HE+A  + KD+  
Sbjct: 356  NVDSAIVPLDSFNEVKFGERKHDTPTMKKKWGFPHRISCEIYLQQIVHEHAFLKAKDKPN 415

Query: 895  FVGRTQTVAGQPFGKGIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHS 716
              G    V+GQ    G  LLGHF  +LAHRIFS++VL +LEN+   V YL L+T PTWHS
Sbjct: 416  LSGTP--VSGQSGKDGPGLLGHFCLSLAHRIFSSRVLIELENVVCRVPYLHLMTHPTWHS 473

Query: 715  RTSSWSLLMKVPQSIVQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVV 536
            R SSW++ MKVPQSI+   ++    +  + K+ +KSQF TKVV+ DD IN+EGEGAPNVV
Sbjct: 474  RKSSWTIFMKVPQSILHAESQSPRSDFQNIKDVIKSQFHTKVVLSDDRINVEGEGAPNVV 533

Query: 535  SVFNGGTEKTCSLNNYGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFE 356
             +F   +E  CS+N Y  DLADLPVILLQQVASQVI WL  EA+MVG+K +R FL L+F+
Sbjct: 534  GLFKRSSEDICSVNKYDCDLADLPVILLQQVASQVIRWLHGEALMVGIKTNRYFLSLAFD 593

Query: 355  LDQGDRLCLVARVDPKDTEGCISWWLVLADGLMQEGKLRTS-SNGESENVKF 203
            L+QG+ + LVA VDP+D +G ISWWLV+ DG  ++ KL+    +G  E  KF
Sbjct: 594  LEQGESVSLVAHVDPEDIQGGISWWLVMEDGFAEDWKLQMEIYDGTPEYRKF 645


>emb|CDP10383.1| unnamed protein product [Coffea canephora]
          Length = 665

 Score =  706 bits (1823), Expect = 0.0
 Identities = 377/673 (56%), Positives = 469/673 (69%), Gaps = 21/673 (3%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            MDGN++I+ID LPIKRL+ +EE+G+E FP D+GH++KR++LIRRIDFAWAVE        
Sbjct: 1    MDGNLDISIDKLPIKRLEVIEENGVERFPSDVGHEEKRVDLIRRIDFAWAVEREEPSSKK 60

Query: 1900 XXXXXK-------------PWPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTR 1760
                               PW WQ+L+ENLQLAHQELSVIID INT+EAN+ VTVA MTR
Sbjct: 61   QKKTTTSSTSKETHNSGNQPWQWQSLLENLQLAHQELSVIIDLINTLEANNDVTVASMTR 120

Query: 1759 PKPLPSELLSDLSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKV 1580
            PK LP+ELLSDL+VS ATKLQCFRHLG+YFKQSAK LEQQ+AREARFYGALIRLQ+NWKV
Sbjct: 121  PKQLPNELLSDLAVSTATKLQCFRHLGRYFKQSAKALEQQVAREARFYGALIRLQQNWKV 180

Query: 1579 KRQRTTVSTSSSEGFTIDLYDNS-SDPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRS 1403
            KR R   + S +EGF IDL+DNS +DP A +RP S+S++RV+HDSAGMLAVNLPP SCR+
Sbjct: 181  KRHRAVAAASGNEGFYIDLFDNSLNDPAAAFRPSSVSTVRVEHDSAGMLAVNLPPNSCRT 240

Query: 1402 IHFGFLGGRSGYE-RHDCVGKLPL----GEKKAVRDD-DVDVCVKETHLVLREVHRAIFH 1241
            + F FLG  S Y  R     K+      G ++  ++  + D CV+ETH +LREVH AIF+
Sbjct: 241  LQFEFLGAHSSYNARRSSRTKVQTFIADGYEETKKEHLNDDKCVRETHALLREVHLAIFN 300

Query: 1240 EQVFDLVNREAFSPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQN 1061
            EQVF+LVNRE F+PS+GVNVTGI+ENYL L IGQGASV +SLVP  QD D+T       N
Sbjct: 301  EQVFELVNREVFNPSIGVNVTGIQENYLRLSIGQGASVSVSLVPSGQD-DQTVSITGTNN 359

Query: 1060 WETVLIPSDTFDTVRVGEQMHDTKISKFPSSISYEIYLQQFFHENALARVKDRRPFVGRT 881
             ET +I  ++F+     E   + K S F + IS+EIYLQQ FHE+   + K R     R+
Sbjct: 360  LETAIISMESFE-----EGRRNFKKSAFANQISFEIYLQQLFHEHVFVKAKRRAASSSRS 414

Query: 880  QTVAGQPFGKGIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRTSSW 701
            Q V GQP     +LLGHF  +LAHRIFS +VL +LENL   + Y+ L++ PTWHSRTSSW
Sbjct: 415  Q-VPGQPAKDSFNLLGHFCLSLAHRIFSIRVLTELENLVRGIPYVHLMSHPTWHSRTSSW 473

Query: 700  SLLMKVPQSIVQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSVFNG 521
            +L + +PQ I   GN+ + ++  +    +KSQ+ TKV+V DDCI +EGEGAP VV +F G
Sbjct: 474  TLSINIPQPISLAGNQAQ-VSALTHIKSLKSQYWTKVLVNDDCITVEGEGAPKVVGLFKG 532

Query: 520  GTEKTCSLNNYGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELDQGD 341
             +E    +N Y  +LADLP+ILLQQVASQVI WL +EA+ VG+K +RDFL LSFELDQG+
Sbjct: 533  KSETISPMNRYNCELADLPLILLQQVASQVISWLHDEALTVGIKANRDFLSLSFELDQGE 592

Query: 340  RLCLVARVDPKDTEGCISWWLVLADGLMQEGKLRTS-SNGESENVKFXXXXXXXXXXXXX 164
             L LV+ +DP+D EGCISWWLV+ DG  +E KLR   SN ESE  KF             
Sbjct: 593  LLSLVSHIDPEDAEGCISWWLVMEDGFTEEHKLRMDISNSESETRKFLGHLSLDVLYSTV 652

Query: 163  XXXXXLCNGEGSH 125
                 LC G G H
Sbjct: 653  FDLVGLCGGGGMH 665


>ref|XP_012456203.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like isoform X1 [Gossypium raimondii]
            gi|763740222|gb|KJB07721.1| hypothetical protein
            B456_001G041100 [Gossypium raimondii]
          Length = 663

 Score =  702 bits (1812), Expect = 0.0
 Identities = 377/672 (56%), Positives = 480/672 (71%), Gaps = 20/672 (2%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            MDGN+EI++D LPIKRL+++EE+G+E +P D  +D+KR+ LIRRIDFAWA+E        
Sbjct: 1    MDGNLEISLDKLPIKRLESIEENGVERYPSDSSYDEKRVSLIRRIDFAWALEDDEERERK 60

Query: 1900 XXXXXKP------WPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKPLPSE 1739
                         W WQ++VENLQLAHQELSVIID INTV+ANDAVTVAGMTRPKPLP+E
Sbjct: 61   KRQKKSSKDASATWQWQSMVENLQLAHQELSVIIDLINTVDANDAVTVAGMTRPKPLPNE 120

Query: 1738 LLSDLSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQRTTV 1559
            +LSDL+VSAATKLQC+R LGKYFKQSAK LE+QIAREARFYGALIRLQ+NWKVKRQR   
Sbjct: 121  VLSDLAVSAATKLQCYRQLGKYFKQSAKALEEQIAREARFYGALIRLQQNWKVKRQRLAA 180

Query: 1558 STSSSEGFTIDLYDNSS-DPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIHFGFLG 1382
            + SSSEGF IDL+DNS  D  A+ RP S+S+IRVDHDSAGMLA+NLPP SCRS+HFGFLG
Sbjct: 181  AASSSEGFIIDLFDNSLYDSAAMCRPSSLSTIRVDHDSAGMLAINLPPNSCRSLHFGFLG 240

Query: 1381 GRSGYERHDCVGKLPLG----------EKKAVRDDDVDVCVKETHLVLREVHRAIFHEQV 1232
              S     + +GK+             EK+++ DD+    +KETH +LREVH++IF +QV
Sbjct: 241  VHSADIPKE-LGKIRTRGSVEQCTREREKESMSDDEY---IKETHTLLREVHQSIFDDQV 296

Query: 1231 FDLVNREAFSPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQNWET 1052
            F+++NREAF+ S+GVNVTGIRENYL+L IGQG +++ISLVP  +  D+  ++ + Q+ E+
Sbjct: 297  FEMLNREAFNQSIGVNVTGIRENYLQLSIGQGNTLFISLVPSGKGDDQ--DAANTQDSES 354

Query: 1051 VLIPSDTFDTVRVGEQMHDTKISK--FPSSISYEIYLQQFFHENALARVKDRRPFVGRTQ 878
             ++P D+FD V++ E  H T   K  FP+  S EIYLQQ  HE+A  + KD+    G   
Sbjct: 355  AIVPLDSFDNVKL-EGKHGTSKRKWGFPNRTSCEIYLQQIVHEHAFVKAKDKPNLSGTR- 412

Query: 877  TVAGQPFGKGIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRTSSWS 698
             V+GQ    G  LLGHF  +LAHRIFSN+VL +LEN+   V YL L+T PTWHS+TSSW+
Sbjct: 413  -VSGQSGKDGPGLLGHFCLSLAHRIFSNRVLVELENVVCRVPYLHLMTHPTWHSQTSSWT 471

Query: 697  LLMKVPQSIVQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSVFNGG 518
            + +KVPQSI+   ++    +  + K+ VKSQF TKVVV DD IN+EG+GAPNVVS+F   
Sbjct: 472  IFLKVPQSILHAESQSLKSDFQNMKDAVKSQFRTKVVVNDDRINVEGDGAPNVVSLFKRS 531

Query: 517  TEKTCSLNNYGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELDQGDR 338
            +E   S+N Y  DLADLPVI+L Q ASQVICWL EEA+MVG+K +RDFLCL+FEL+QGD 
Sbjct: 532  SENISSVNKYECDLADLPVIILLQAASQVICWLHEEALMVGIKTNRDFLCLTFELEQGDT 591

Query: 337  LCLVARVDPKDTEGCISWWLVLADGLMQEGKLRTSS-NGESENVKFXXXXXXXXXXXXXX 161
            + LVA V+P+D +G I+WWLV+ DG   + KL+    +G SE  KF              
Sbjct: 592  VSLVAHVNPEDIKGGIAWWLVMEDGSPDDWKLQMDMYDGASEYRKFLGHLTLDVLYSTLM 651

Query: 160  XXXXLCNGEGSH 125
                LC G  +H
Sbjct: 652  DLVSLCGGGRNH 663


>ref|XP_009781829.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
            [Nicotiana sylvestris]
          Length = 671

 Score =  700 bits (1806), Expect = 0.0
 Identities = 377/651 (57%), Positives = 456/651 (70%), Gaps = 25/651 (3%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            M+G++EI++D LPIKRL+ +EE G E FP DIG+D+K + LIRRIDFAWAVE        
Sbjct: 1    MNGDLEISVDKLPIKRLEFIEEGGAERFPSDIGYDEKTVNLIRRIDFAWAVEREEPKSKK 60

Query: 1900 XXXXXK------------------PWPWQTLVENLQLAHQELSVIIDSINTVEANDAVTV 1775
                                    PW WQTLVENL+LAHQEL VIID I+TVEANDAVTV
Sbjct: 61   QKKKSSSSSSTSTSSKETSSSNQQPWQWQTLVENLRLAHQELQVIIDLIHTVEANDAVTV 120

Query: 1774 AGMTRPKPLPSELLSDLSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQ 1595
            AGMTRPK LP+E LSDL+VS ATKLQCFRHLGKYFKQSAK LEQQ+AREARFYGALIRLQ
Sbjct: 121  AGMTRPKQLPNEHLSDLAVSMATKLQCFRHLGKYFKQSAKALEQQVAREARFYGALIRLQ 180

Query: 1594 KNWKVKRQRTTVSTSSSEGFTIDLYDNS-SDPMAVYRPPSISSIRVDHDSAGMLAVNLPP 1418
            +NWKVK  R   + S +EGF IDL+DNS  DP   +RP S S +RV+HD AGMLAVNLP 
Sbjct: 181  QNWKVKWHRMVAAASGNEGFYIDLFDNSLYDPAVAFRPSSASVVRVEHDPAGMLAVNLPS 240

Query: 1417 KSCRSIHFGFLGGR--SGY---ERHDCVGKLPLGEKKAVRDDDVDVCVKETHLVLREVHR 1253
             SCR++ F FLG R  SG     R    G   +   +  R+   D  V+ETH  LREVHR
Sbjct: 241  NSCRTLQFEFLGARAPSGIIKESRTKPKGSFEVSSGETKREKTDDEHVRETHSTLREVHR 300

Query: 1252 AIFHEQVFDLVNREAFSPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESD 1073
            AIF EQVFDLVNREAF+P+LGV+VTGI+EN L L IGQGAS+ ISLVP  +D    N   
Sbjct: 301  AIFDEQVFDLVNREAFNPALGVDVTGIQENLLRLSIGQGASLSISLVPSTEDDQAANAVA 360

Query: 1072 DKQNWETVLIPSDTFDTVRVGEQMHDTKISKFPSSISYEIYLQQFFHENALARVKDRRPF 893
            D+ + ET ++P ++ D   + E   D K   FP+ IS+EIYLQQ FHE+   + K R   
Sbjct: 361  DEHS-ETAIVPLESVDASELDEGKLDFKKLGFPNRISFEIYLQQIFHEHVFIKAKKRLSS 419

Query: 892  VGRTQTVAGQPFGKGIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSR 713
            +G+TQT A  P   G +LLGHF  +LAHRIFSNKVLA+LE+L + + Y+QL++ P+WHSR
Sbjct: 420  LGKTQTSA-PPTKDGPNLLGHFCVSLAHRIFSNKVLAELESLVSRIPYVQLISHPSWHSR 478

Query: 712  TSSWSLLMKVPQSIVQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVS 533
             SSW+L MKVP SI+  G+     +       VKS F TKV+V DDCI++EGEGAPNVV 
Sbjct: 479  RSSWTLSMKVPDSILHAGSLSHSSDY---VKNVKSHFRTKVMVRDDCISLEGEGAPNVVG 535

Query: 532  VFNGGTEKTCSLNNYGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFEL 353
            +F G  + TC +N Y  DL+DLP+ILLQQVASQVI WL EEA+MVG+K +RDFL LSFEL
Sbjct: 536  LFKGKPDITCPMNRYDCDLSDLPMILLQQVASQVIRWLHEEALMVGIKANRDFLSLSFEL 595

Query: 352  DQGDRLCLVARVDPKDTEGCISWWLVLADGLMQEGKLRTS-SNGESENVKF 203
            +QG+ LCLVA VDP+D +GCISWWLV+ D   +E KL    +NGESE  KF
Sbjct: 596  EQGETLCLVAHVDPEDLQGCISWWLVMDDEFSEESKLNMDINNGESETRKF 646


>gb|KJB07723.1| hypothetical protein B456_001G041100 [Gossypium raimondii]
          Length = 662

 Score =  697 bits (1800), Expect = 0.0
 Identities = 377/672 (56%), Positives = 480/672 (71%), Gaps = 20/672 (2%)
 Frame = -2

Query: 2080 MDGNIEIAIDPLPIKRLDAVEESGLEIFPPDIGHDQKRLELIRRIDFAWAVEXXXXXXXX 1901
            MDGN+EI++D LPIKRL+++EE+G+E +P D  +D+KR+ LIRRIDFAWA+E        
Sbjct: 1    MDGNLEISLDKLPIKRLESIEENGVERYPSDSSYDEKRVSLIRRIDFAWALEDDEERERK 60

Query: 1900 XXXXXKP------WPWQTLVENLQLAHQELSVIIDSINTVEANDAVTVAGMTRPKPLPSE 1739
                         W WQ++VENLQLAHQELSVIID INTV+ANDAVTVAGMTRPKPLP+E
Sbjct: 61   KRQKKSSKDASATWQWQSMVENLQLAHQELSVIIDLINTVDANDAVTVAGMTRPKPLPNE 120

Query: 1738 LLSDLSVSAATKLQCFRHLGKYFKQSAKGLEQQIAREARFYGALIRLQKNWKVKRQRTTV 1559
            +LSDL+VSAATKLQC+R LGKYFKQSAK LE+QIAREARFYGALIRLQ+NWKVKRQR   
Sbjct: 121  VLSDLAVSAATKLQCYRQLGKYFKQSAKALEEQIAREARFYGALIRLQQNWKVKRQRLAA 180

Query: 1558 STSSSEGFTIDLYDNSS-DPMAVYRPPSISSIRVDHDSAGMLAVNLPPKSCRSIHFGFLG 1382
            + SSSEGF IDL+DNS  D  A+ RP S+S+IRVDHDSAGMLA+NLPP SCRS+HFGFLG
Sbjct: 181  AASSSEGFIIDLFDNSLYDSAAMCRPSSLSTIRVDHDSAGMLAINLPPNSCRSLHFGFLG 240

Query: 1381 GRSGYERHDCVGKLPLG----------EKKAVRDDDVDVCVKETHLVLREVHRAIFHEQV 1232
              S     + +GK+             EK+++ DD+    +KETH +LREVH++IF +QV
Sbjct: 241  VHSADIPKE-LGKIRTRGSVEQCTREREKESMSDDEY---IKETHTLLREVHQSIFDDQV 296

Query: 1231 FDLVNREAFSPSLGVNVTGIRENYLELGIGQGASVYISLVPLQQDVDETNESDDKQNWET 1052
            F+++NREAF+ S+GVNVTGIRENYL+L IGQG +++ISLVP  +  D+  ++ + Q+ E+
Sbjct: 297  FEMLNREAFNQSIGVNVTGIRENYLQLSIGQGNTLFISLVPSGKGDDQ--DAANTQDSES 354

Query: 1051 VLIPSDTFDTVRVGEQMHDTKISK--FPSSISYEIYLQQFFHENALARVKDRRPFVGRTQ 878
             ++P D+FD V++ E  H T   K  FP+  S EIYLQQ  HE+A  + KD+    G   
Sbjct: 355  AIVPLDSFDNVKL-EGKHGTSKRKWGFPNRTSCEIYLQQIVHEHAFVKAKDKPNLSGTR- 412

Query: 877  TVAGQPFGKGIDLLGHFSATLAHRIFSNKVLAQLENLAANVSYLQLLTRPTWHSRTSSWS 698
             V+GQ    G  LLGHF  +LAHRIFSN+VL +LEN+   V YL L+T PTWHS+TSSW+
Sbjct: 413  -VSGQSGKDGPGLLGHFCLSLAHRIFSNRVLVELENVC-RVPYLHLMTHPTWHSQTSSWT 470

Query: 697  LLMKVPQSIVQGGNRIRPLNIHSRKNEVKSQFETKVVVIDDCINIEGEGAPNVVSVFNGG 518
            + +KVPQSI+   ++    +  + K+ VKSQF TKVVV DD IN+EG+GAPNVVS+F   
Sbjct: 471  IFLKVPQSILHAESQSLKSDFQNMKDAVKSQFRTKVVVNDDRINVEGDGAPNVVSLFKRS 530

Query: 517  TEKTCSLNNYGYDLADLPVILLQQVASQVICWLQEEAIMVGMKVSRDFLCLSFELDQGDR 338
            +E   S+N Y  DLADLPVI+L Q ASQVICWL EEA+MVG+K +RDFLCL+FEL+QGD 
Sbjct: 531  SENISSVNKYECDLADLPVIILLQAASQVICWLHEEALMVGIKTNRDFLCLTFELEQGDT 590

Query: 337  LCLVARVDPKDTEGCISWWLVLADGLMQEGKLRTSS-NGESENVKFXXXXXXXXXXXXXX 161
            + LVA V+P+D +G I+WWLV+ DG   + KL+    +G SE  KF              
Sbjct: 591  VSLVAHVNPEDIKGGIAWWLVMEDGSPDDWKLQMDMYDGASEYRKFLGHLTLDVLYSTLM 650

Query: 160  XXXXLCNGEGSH 125
                LC G  +H
Sbjct: 651  DLVSLCGGGRNH 662