BLASTX nr result

ID: Aconitum23_contig00012556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00012556
         (417 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011044162.1| PREDICTED: 60S ribosomal protein L17-like [P...    60   8e-07
ref|XP_002318720.1| 60S ribosomal protein L17-1 [Populus trichoc...    60   8e-07
ref|XP_002322246.1| 60S ribosomal protein L17-1 [Populus trichoc...    57   4e-06
gb|ABK94605.1| unknown [Populus trichocarpa]                           57   4e-06

>ref|XP_011044162.1| PREDICTED: 60S ribosomal protein L17-like [Populus euphratica]
          Length = 181

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = -1

Query: 414 ELTLSEKEEPVKKEADTQLAPSRPKKGLRSGASS 313
           ELTLSEKEEPVKKEADTQ+AP +PK  LRSGASS
Sbjct: 148 ELTLSEKEEPVKKEADTQIAPRKPKGALRSGASS 181


>ref|XP_002318720.1| 60S ribosomal protein L17-1 [Populus trichocarpa]
           gi|118484704|gb|ABK94222.1| unknown [Populus
           trichocarpa] gi|222859393|gb|EEE96940.1| 60S ribosomal
           protein L17-1 [Populus trichocarpa]
          Length = 181

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = -1

Query: 414 ELTLSEKEEPVKKEADTQLAPSRPKKGLRSGASS 313
           ELTLSEKEEPVKKEADTQ+AP +PK  LRSGASS
Sbjct: 148 ELTLSEKEEPVKKEADTQIAPRKPKGALRSGASS 181


>ref|XP_002322246.1| 60S ribosomal protein L17-1 [Populus trichocarpa]
           gi|743831444|ref|XP_011024033.1| PREDICTED: 60S
           ribosomal protein L17-2-like isoform X2 [Populus
           euphratica] gi|222869242|gb|EEF06373.1| 60S ribosomal
           protein L17-1 [Populus trichocarpa]
          Length = 181

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -1

Query: 414 ELTLSEKEEPVKKEADTQLAPSRPKKGLRSGASS 313
           EL LSEKEEPVKKEADTQ+AP +PK  LRSGASS
Sbjct: 148 ELILSEKEEPVKKEADTQIAPRKPKGALRSGASS 181


>gb|ABK94605.1| unknown [Populus trichocarpa]
          Length = 181

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -1

Query: 414 ELTLSEKEEPVKKEADTQLAPSRPKKGLRSGASS 313
           EL LSEKEEPVKKEADTQ+AP +PK  LRSGASS
Sbjct: 148 ELILSEKEEPVKKEADTQIAPRKPKGALRSGASS 181


Top