BLASTX nr result
ID: Aconitum23_contig00011785
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00011785
(1991 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003621689.1| NAD(P)H-quinone oxidoreductase chain 4 [Medi... 710 0.0
ref|XP_003604161.1| NAD(P)H-quinone oxidoreductase chain 4 [Medi... 687 0.0
ref|YP_009114917.1| NADH dehydrogenase subunit 4 [Thalictrum cor... 772 0.0
ref|YP_740701.1| NADH-plastoquinone oxidoreductase subunit 4 [Na... 765 0.0
ref|YP_002836140.1| NADH-plastoquinone oxidoreductase subunit 4 ... 770 0.0
ref|YP_001004239.1| NADH-plastoquinone oxidoreductase subunit 4 ... 773 0.0
gb|AIZ57599.1| NADH dehydrogenase subunit 4 (chloroplast) [Clema... 761 0.0
ref|YP_009169401.1| NADH-plastoquinone oxidoreductase subunit 4 ... 760 0.0
ref|YP_009163068.1| NADH-plastoquinone oxidoreductase subunit 4 ... 762 0.0
ref|YP_007353821.1| NADH dehydrogenase subunit 4 (chloroplast) [... 764 0.0
gb|ADD29815.1| NADH-plastoquinone oxidoreductase subunit 4 prote... 753 0.0
gb|AIG52126.1| NADH dehydrogenase subunit 4, partial (chloroplas... 752 0.0
prf||1211235CP NADH dehydrogenase 4-like ORF 509B 757 0.0
ref|YP_009048340.1| NADH-plastoquinone oxidoreductase chain 4 (c... 749 0.0
ref|YP_008592696.1| NADH-plastoquinone oxidoreductase subunit 4 ... 754 0.0
ref|YP_740615.1| NADH-plastoquinone oxidoreductase subunit 4 [Pl... 749 0.0
ref|YP_004465243.1| NADH-plastoquinone oxidoreductase subunit 4 ... 753 0.0
ref|YP_740252.1| NADH-plastoquinone oxidoreductase subunit 4 [Li... 748 0.0
gb|ACB29120.1| NADH dehydrogenase subunit D, partial (chloroplas... 752 0.0
ref|YP_009122912.1| NADH-plastoquinone oxidoreductase subunit 4 ... 754 0.0
>ref|XP_003621689.1| NAD(P)H-quinone oxidoreductase chain 4 [Medicago truncatula]
gi|355496704|gb|AES77907.1| NAD(P)H-quinone
oxidoreductase chain 4 [Medicago truncatula]
Length = 587
Score = 710 bits (1833), Expect(3) = 0.0
Identities = 352/445 (79%), Positives = 381/445 (85%)
Frame = +2
Query: 473 ARVFLVKVYLVFTTNDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXT 652
AR FL +VYL+F TN FPWLTI+VV PI G+ IF FPHRGNKVIRWY+I IC T
Sbjct: 78 ARAFLAQVYLIFMTNYFPWLTIVVVFPIAVGSLIFLFPHRGNKVIRWYSISICLIDLLLT 137
Query: 653 AYVFCYHFQLDDPLIQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPV 832
Y FCYHFQLDDPLIQL ++YKWI+FF F+WRLGIDGLSIGPILLTGFITTLATLAA PV
Sbjct: 138 TYAFCYHFQLDDPLIQLTENYKWINFFDFYWRLGIDGLSIGPILLTGFITTLATLAAQPV 197
Query: 833 TRDSRLFHFLMLAMYSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKF 1012
TR+ +LF+FLMLAMYSGQIGPFSSRD+LLFFIMWELELIPVY+LL+MWGGK RLYSATKF
Sbjct: 198 TREYQLFYFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYILLAMWGGKKRLYSATKF 257
Query: 1013 ILYTAGGSIFXXXXXXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPI 1192
ILYTAGGS+F SNEPTLNFETL NQSYPVALEII Y FLIA+AVK PI
Sbjct: 258 ILYTAGGSVFLLMGILGIGLYGSNEPTLNFETLTNQSYPVALEIILYTAFLIAFAVKSPI 317
Query: 1193 IPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQ 1372
IPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEL HAHSIF PWLMI+G+ Q
Sbjct: 318 IPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELFSHAHSIFCPWLMILGSTQ 377
Query: 1373 IIYAASTSLGQRNLKKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFF 1552
IIYAASTS GQRNLKKRIAYSSVSHM +DTGLNGAILQ+ISHGFIGAALFF
Sbjct: 378 IIYAASTSFGQRNLKKRIAYSSVSHMGFIILGIGSISDTGLNGAILQIISHGFIGAALFF 437
Query: 1553 LAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITS 1732
LAGTSYDR+ L+YLDEMGG+AIPM KIFT+F+ SMASLAL GMSGFVAEL+VFFG+ITS
Sbjct: 438 LAGTSYDRLHLLYLDEMGGMAIPMLKIFTIFTILSMASLALSGMSGFVAELIVFFGIITS 497
Query: 1733 RKYLLMPKILIIFVAAIGMILTPIY 1807
+KYL M KILI FV AIGMILTPIY
Sbjct: 498 QKYLFMMKILITFVTAIGMILTPIY 522
Score = 165 bits (418), Expect(3) = 0.0
Identities = 76/81 (93%), Positives = 77/81 (95%)
Frame = +3
Query: 147 MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPT 326
MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPT
Sbjct: 1 MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPT 60
Query: 327 DFLSVRVYLWHETTRSMGLAY 389
DFLSVRVYL ETTRSM A+
Sbjct: 61 DFLSVRVYLGPETTRSMARAF 81
Score = 94.0 bits (232), Expect(3) = 0.0
Identities = 41/52 (78%), Positives = 48/52 (92%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
QMFYGYK F++PNS+FFDSGPRELF+SI I +PVIGIGIYPDF+FS S+DKV
Sbjct: 529 QMFYGYKFFNTPNSYFFDSGPRELFISISILIPVIGIGIYPDFIFSFSVDKV 580
>ref|XP_003604161.1| NAD(P)H-quinone oxidoreductase chain 4 [Medicago truncatula]
gi|355505216|gb|AES86358.1| NAD(P)H-quinone
oxidoreductase chain 4 [Medicago truncatula]
Length = 573
Score = 687 bits (1772), Expect(3) = 0.0
Identities = 345/445 (77%), Positives = 373/445 (83%)
Frame = +2
Query: 473 ARVFLVKVYLVFTTNDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXT 652
AR FL +VYL+F TN FPWLTI+VV PI AG+ IF FPHRGNKVIRWY+I IC T
Sbjct: 78 ARAFLAQVYLIFMTNYFPWLTIVVVFPIAAGSLIFLFPHRGNKVIRWYSISICLIDLLLT 137
Query: 653 AYVFCYHFQLDDPLIQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPV 832
Y FCYHFQLDDPLIQL ++YKWI+FF F+WRLGIDGLSIGPILLTGFITTLATLAA PV
Sbjct: 138 TYAFCYHFQLDDPLIQLTENYKWINFFDFYWRLGIDGLSIGPILLTGFITTLATLAAQPV 197
Query: 833 TRDSRLFHFLMLAMYSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKF 1012
TR+ +LF+FLMLAMYSGQIGPFSSRD+LLFFIMWELELIPVY+LL F
Sbjct: 198 TREYQLFYFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYILL--------------F 243
Query: 1013 ILYTAGGSIFXXXXXXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPI 1192
ILYTAGGS+F SNEPTLNFETL NQSYPVALEII Y FLIA+AVK PI
Sbjct: 244 ILYTAGGSVFLLMGILGIGLYGSNEPTLNFETLTNQSYPVALEIILYTAFLIAFAVKSPI 303
Query: 1193 IPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQ 1372
IPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEL HAHSIF PWLMI+G+IQ
Sbjct: 304 IPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELFSHAHSIFCPWLMILGSIQ 363
Query: 1373 IIYAASTSLGQRNLKKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFF 1552
IIYAASTS GQRNLKKRIAYSSVSHM +DTGLNGAILQ+ISHGFIGAALFF
Sbjct: 364 IIYAASTSFGQRNLKKRIAYSSVSHMGFIILGIGSISDTGLNGAILQIISHGFIGAALFF 423
Query: 1553 LAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITS 1732
LAGTSYDR+RL+YLDEMGG+AIPMPKIFT+F+ SMASLALPGMSGFVAEL+VFFG+ITS
Sbjct: 424 LAGTSYDRLRLLYLDEMGGMAIPMPKIFTIFTILSMASLALPGMSGFVAELIVFFGIITS 483
Query: 1733 RKYLLMPKILIIFVAAIGMILTPIY 1807
+KYL M KILI FV AIGMILTPIY
Sbjct: 484 QKYLFMMKILITFVTAIGMILTPIY 508
Score = 165 bits (418), Expect(3) = 0.0
Identities = 76/81 (93%), Positives = 77/81 (95%)
Frame = +3
Query: 147 MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPT 326
MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPT
Sbjct: 1 MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPT 60
Query: 327 DFLSVRVYLWHETTRSMGLAY 389
DFLSVRVYL ETTRSM A+
Sbjct: 61 DFLSVRVYLGPETTRSMARAF 81
Score = 94.0 bits (232), Expect(3) = 0.0
Identities = 41/52 (78%), Positives = 48/52 (92%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
QMFYGYK F++PNS+FFDSGPRELF+SI I +PVIGIGIYPDF+FS S+DKV
Sbjct: 515 QMFYGYKFFNTPNSYFFDSGPRELFISISILIPVIGIGIYPDFIFSFSVDKV 566
>ref|YP_009114917.1| NADH dehydrogenase subunit 4 [Thalictrum coreanum]
gi|721136354|gb|AIX03565.1| NADH dehydrogenase subunit 4
(plastid) [Thalictrum coreanum]
Length = 503
Score = 772 bits (1993), Expect(2) = 0.0
Identities = 384/431 (89%), Positives = 390/431 (90%)
Frame = +2
Query: 515 NDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTAYVFCYHFQLDDPL 694
NDFPWLTII VLPIFAGTFIFFFPHRGNKVIRWYTICIC T+Y FCYHFQ DDPL
Sbjct: 2 NDFPWLTIIAVLPIFAGTFIFFFPHRGNKVIRWYTICICILELLLTSYAFCYHFQFDDPL 61
Query: 695 IQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAM 874
IQLEQDYKWIHFF FHWRLGIDGLSIGP+LLTGFITTLATLAAWPVTRDSRLFHFLMLAM
Sbjct: 62 IQLEQDYKWIHFFDFHWRLGIDGLSIGPVLLTGFITTLATLAAWPVTRDSRLFHFLMLAM 121
Query: 875 YSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFILYTAGGSIFXXXX 1054
YSGQIG FSSRDLLLFFIMWELELIPVYLLLSMWGGK RLYSATKFILYTAGGSIF
Sbjct: 122 YSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLMG 181
Query: 1055 XXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPIIPLHTWLPDTHGEA 1234
SNEPTLNFET ANQSYPVALEII YFGFLIAYAVKLPIIPLHTWLPDTHGEA
Sbjct: 182 VLGMGLYGSNEPTLNFETSANQSYPVALEIILYFGFLIAYAVKLPIIPLHTWLPDTHGEA 241
Query: 1235 HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNL 1414
HYSTCMLLAGILLKMGAYGLVRINMELLP AHSIFSPWLMI+G IQIIYAASTS GQRNL
Sbjct: 242 HYSTCMLLAGILLKMGAYGLVRINMELLPRAHSIFSPWLMIVGAIQIIYAASTSPGQRNL 301
Query: 1415 KKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYL 1594
KKRIAYSSVSHM TDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYL
Sbjct: 302 KKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYL 361
Query: 1595 DEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSRKYLLMPKILIIFV 1774
DEMGGIA+PMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITS+KYLL+PKILI FV
Sbjct: 362 DEMGGIAVPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSQKYLLIPKILITFV 421
Query: 1775 AAIGMILTPIY 1807
AIGMILTPIY
Sbjct: 422 TAIGMILTPIY 432
Score = 103 bits (257), Expect(2) = 0.0
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
QMFYGYKQF+ PN HFFDSGPRELFVSICIFLPVIGIGIYPDFV SLSIDKV
Sbjct: 439 QMFYGYKQFYFPNYHFFDSGPRELFVSICIFLPVIGIGIYPDFVLSLSIDKV 490
>ref|YP_740701.1| NADH-plastoquinone oxidoreductase subunit 4 [Nandina domestica]
gi|122165917|sp|Q09FR0.1|NU4C_NANDO RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase, chain
4; AltName: Full=NADH-plastoquinone oxidoreductase chain
4 gi|114054522|gb|ABI49915.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Nandina
domestica]
Length = 500
Score = 765 bits (1975), Expect(2) = 0.0
Identities = 379/431 (87%), Positives = 388/431 (90%)
Frame = +2
Query: 515 NDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTAYVFCYHFQLDDPL 694
N FPWLTIIVVLPIFAG+ IFFFPHRGNKVIRWYTICIC T Y FCYHFQLDDPL
Sbjct: 2 NSFPWLTIIVVLPIFAGSSIFFFPHRGNKVIRWYTICICLLELLLTTYAFCYHFQLDDPL 61
Query: 695 IQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAM 874
+QLEQDYKWI+ F FHWRLGIDGLSIGP+LLTGFITTLATLAAWPVTRDSRLFHFLMLAM
Sbjct: 62 VQLEQDYKWINIFDFHWRLGIDGLSIGPVLLTGFITTLATLAAWPVTRDSRLFHFLMLAM 121
Query: 875 YSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFILYTAGGSIFXXXX 1054
YSGQIG FSSRDLLLFFIMWELELIPVYLLLSMWGGK RLYSATKFILYTAGGSIF
Sbjct: 122 YSGQIGSFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLIG 181
Query: 1055 XXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPIIPLHTWLPDTHGEA 1234
SNEPTLNFET ANQSYPVALEI+ YFGF IAYAVKLPIIPLHTWLPDTHGEA
Sbjct: 182 VSGMGLYGSNEPTLNFETSANQSYPVALEILLYFGFFIAYAVKLPIIPLHTWLPDTHGEA 241
Query: 1235 HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNL 1414
HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMI+GTIQIIYAASTSLGQRNL
Sbjct: 242 HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIVGTIQIIYAASTSLGQRNL 301
Query: 1415 KKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYL 1594
KKRIAYSSVSHM TDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYL
Sbjct: 302 KKRIAYSSVSHMGFTILGISSITDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYL 361
Query: 1595 DEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSRKYLLMPKILIIFV 1774
DEMGGIAIPMPKIFT+FSSFSMASLALPGMSGFVAELVVFFG+ITS K+ LMPKILI FV
Sbjct: 362 DEMGGIAIPMPKIFTLFSSFSMASLALPGMSGFVAELVVFFGIITSEKFFLMPKILITFV 421
Query: 1775 AAIGMILTPIY 1807
AIGMILTPIY
Sbjct: 422 TAIGMILTPIY 432
Score = 105 bits (263), Expect(2) = 0.0
Identities = 48/52 (92%), Positives = 51/52 (98%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
Q+FYGYKQF+ PNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLS+DKV
Sbjct: 439 QIFYGYKQFNVPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSVDKV 490
>ref|YP_002836140.1| NADH-plastoquinone oxidoreductase subunit 4 [Megaleranthis
saniculifolia] gi|226933932|gb|ACO92065.1|
NADH-plastoquinone oxidoreductase subunit 4 (chloroplast)
[Megaleranthis saniculifolia]
Length = 500
Score = 770 bits (1989), Expect(2) = 0.0
Identities = 387/431 (89%), Positives = 391/431 (90%)
Frame = +2
Query: 515 NDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTAYVFCYHFQLDDPL 694
NDFPWLTIIVVLPIFAGTFI FFPHRGNKVIRWYTICIC TAY FCY+FQLDDPL
Sbjct: 2 NDFPWLTIIVVLPIFAGTFILFFPHRGNKVIRWYTICICLLELLLTAYAFCYYFQLDDPL 61
Query: 695 IQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAM 874
IQLEQDYKWI+FF FHWRLGIDGLSIGPILLTGFITTLATLAA PVTRDSRLFHFLMLAM
Sbjct: 62 IQLEQDYKWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAACPVTRDSRLFHFLMLAM 121
Query: 875 YSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFILYTAGGSIFXXXX 1054
YSGQIG FSSRDLLLFFIMWELELIPVYLLLSMWGGK RLYSATKFILYTAGGSIF
Sbjct: 122 YSGQIGSFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLMG 181
Query: 1055 XXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPIIPLHTWLPDTHGEA 1234
SNEPTLNFET ANQSYPVALEII YFGFLIAYAVKLPIIPLHTWLPDTHGEA
Sbjct: 182 VLGMGLYGSNEPTLNFETSANQSYPVALEIILYFGFLIAYAVKLPIIPLHTWLPDTHGEA 241
Query: 1235 HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNL 1414
HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMI+G IQIIYAASTS GQRNL
Sbjct: 242 HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIVGAIQIIYAASTSSGQRNL 301
Query: 1415 KKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYL 1594
KKRIAYSSVSHM TDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYL
Sbjct: 302 KKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYL 361
Query: 1595 DEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSRKYLLMPKILIIFV 1774
DEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITS+KYLLMPKILI FV
Sbjct: 362 DEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSQKYLLMPKILITFV 421
Query: 1775 AAIGMILTPIY 1807
AIGMILTPIY
Sbjct: 422 TAIGMILTPIY 432
Score = 98.2 bits (243), Expect(2) = 0.0
Identities = 46/52 (88%), Positives = 48/52 (92%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
QMFYGYKQF+S NS F DSGPRELF+SICIFLPVIGIGIYPDFV SLSIDKV
Sbjct: 439 QMFYGYKQFNSQNSPFLDSGPRELFISICIFLPVIGIGIYPDFVLSLSIDKV 490
>ref|YP_001004239.1| NADH-plastoquinone oxidoreductase subunit 4 [Ranunculus macranthus]
gi|193806233|sp|A1XGU1.1|NU4C_RANMC RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase, chain
4; AltName: Full=NADH-plastoquinone oxidoreductase chain
4 gi|85540857|gb|ABC70809.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Ranunculus
macranthus]
Length = 502
Score = 773 bits (1997), Expect(2) = 0.0
Identities = 384/431 (89%), Positives = 390/431 (90%)
Frame = +2
Query: 515 NDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTAYVFCYHFQLDDPL 694
NDFPWLTIIV LPIFAGT IFFFPHRGNK+IRWYTICIC TAYVFCYHFQLDDPL
Sbjct: 2 NDFPWLTIIVGLPIFAGTLIFFFPHRGNKIIRWYTICICILELLITAYVFCYHFQLDDPL 61
Query: 695 IQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAM 874
IQLEQDYKWIHFF FHWRLGIDGLS+GPILLTGFITTLATLAAWPVTRDSRLFHFLMLAM
Sbjct: 62 IQLEQDYKWIHFFDFHWRLGIDGLSVGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAM 121
Query: 875 YSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFILYTAGGSIFXXXX 1054
YSGQIG FSSRDLLLFFIMWE ELIPVYLLLSMWGGK RLYSATKFILYTAGGSIF
Sbjct: 122 YSGQIGLFSSRDLLLFFIMWEFELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLMG 181
Query: 1055 XXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPIIPLHTWLPDTHGEA 1234
SNEPTLNFET ANQ YPVALEI+FYFGFLI YAVKLPIIPLHTWLPDTHGEA
Sbjct: 182 VLGMGLYGSNEPTLNFETSANQPYPVALEILFYFGFLIGYAVKLPIIPLHTWLPDTHGEA 241
Query: 1235 HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNL 1414
HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWL+I+G IQIIYAASTSLGQRNL
Sbjct: 242 HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLIIVGAIQIIYAASTSLGQRNL 301
Query: 1415 KKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYL 1594
KKRIAYSSVSHM TDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYL
Sbjct: 302 KKRIAYSSVSHMGFIIIGICSITDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYL 361
Query: 1595 DEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSRKYLLMPKILIIFV 1774
DEMGGIAIPMPKIFTMFSSFSMASLALPGMSGF AELVVFFGLITS+KYLLMPKILI FV
Sbjct: 362 DEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFAAELVVFFGLITSQKYLLMPKILITFV 421
Query: 1775 AAIGMILTPIY 1807
AIGMILTPIY
Sbjct: 422 TAIGMILTPIY 432
Score = 94.4 bits (233), Expect(2) = 0.0
Identities = 47/54 (87%), Positives = 48/54 (88%), Gaps = 2/54 (3%)
Frame = +1
Query: 1834 QMFYGYKQFH--SPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
QMFYGYKQF S NS FFDSGPRELFVSICIFLPVIGIGIYPDFV SLS+DKV
Sbjct: 439 QMFYGYKQFKFKSLNSSFFDSGPRELFVSICIFLPVIGIGIYPDFVLSLSVDKV 492
>gb|AIZ57599.1| NADH dehydrogenase subunit 4 (chloroplast) [Clematis fusca var.
coreana]
Length = 500
Score = 761 bits (1965), Expect(2) = 0.0
Identities = 378/431 (87%), Positives = 387/431 (89%)
Frame = +2
Query: 515 NDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTAYVFCYHFQLDDPL 694
NDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICIC AYVFCYHFQLDDPL
Sbjct: 2 NDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICLLELLLMAYVFCYHFQLDDPL 61
Query: 695 IQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAM 874
IQLEQDYKWI+FF FHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS+LFHFLMLAM
Sbjct: 62 IQLEQDYKWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSKLFHFLMLAM 121
Query: 875 YSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFILYTAGGSIFXXXX 1054
YSGQIG FSSRDLLLFFIMWELELIPVYLLLSMWGGK RLYSATKFILYTAGGSIF
Sbjct: 122 YSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLMG 181
Query: 1055 XXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPIIPLHTWLPDTHGEA 1234
NEPTLNFET ANQ YPVALEI+FYFGFLIAYA+KLPIIPLHTWLPDTHGEA
Sbjct: 182 VLGMGLYGFNEPTLNFETSANQPYPVALEILFYFGFLIAYAIKLPIIPLHTWLPDTHGEA 241
Query: 1235 HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNL 1414
HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMI+G IQIIYAAS S GQRNL
Sbjct: 242 HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIVGAIQIIYAASASPGQRNL 301
Query: 1415 KKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYL 1594
KKRIAYSSVSHM TDTGLNGA+LQMISHGFIGAALFFLAGTSYDR RLVYL
Sbjct: 302 KKRIAYSSVSHMGFIIIGISSITDTGLNGALLQMISHGFIGAALFFLAGTSYDRTRLVYL 361
Query: 1595 DEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSRKYLLMPKILIIFV 1774
DEMGGI IPMPKIFTMFSSFS+ASLALPGMSGFVAE VVFFGLI S+K+LLMPKILI FV
Sbjct: 362 DEMGGITIPMPKIFTMFSSFSLASLALPGMSGFVAEFVVFFGLIMSQKFLLMPKILITFV 421
Query: 1775 AAIGMILTPIY 1807
AIGMILTPIY
Sbjct: 422 TAIGMILTPIY 432
Score = 101 bits (251), Expect(2) = 0.0
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
QMFYGYKQF+S NSHF DSGPRELF+SICIFLPVIGIGIYPDFV SLSIDKV
Sbjct: 439 QMFYGYKQFNSQNSHFLDSGPRELFLSICIFLPVIGIGIYPDFVLSLSIDKV 490
>ref|YP_009169401.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Clematis
terniflora] gi|687814900|gb|AIQ81142.1|
NADH-plastoquinone oxidoreductase subunit 4 (chloroplast)
[Clematis terniflora]
Length = 500
Score = 760 bits (1962), Expect(2) = 0.0
Identities = 378/431 (87%), Positives = 386/431 (89%)
Frame = +2
Query: 515 NDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTAYVFCYHFQLDDPL 694
NDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICIC AYVFCYHFQLDDPL
Sbjct: 2 NDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICLLELLLMAYVFCYHFQLDDPL 61
Query: 695 IQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAM 874
IQLEQDYKWI+FF FHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS+LFHFLMLAM
Sbjct: 62 IQLEQDYKWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSKLFHFLMLAM 121
Query: 875 YSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFILYTAGGSIFXXXX 1054
YSGQIG FSSRDLLLFFIMWELELIPVYLLLSMWGGK RLYSATKFILYTAGGSIF
Sbjct: 122 YSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLMG 181
Query: 1055 XXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPIIPLHTWLPDTHGEA 1234
SNEPTLNFET ANQ YPVALEI+FYFGFLIAYA+KLPIIPLHTWLPDTHGEA
Sbjct: 182 VLGMGLYGSNEPTLNFETSANQPYPVALEILFYFGFLIAYAIKLPIIPLHTWLPDTHGEA 241
Query: 1235 HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNL 1414
HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMI+G IQIIYAAS S GQRNL
Sbjct: 242 HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIVGAIQIIYAASASPGQRNL 301
Query: 1415 KKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYL 1594
KKRIAYSSVSHM TD GLNGA+LQMISHGFIGAALFFLAGTSYDR RLVYL
Sbjct: 302 KKRIAYSSVSHMGFIIIGISSITDIGLNGALLQMISHGFIGAALFFLAGTSYDRTRLVYL 361
Query: 1595 DEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSRKYLLMPKILIIFV 1774
DEMGGI IPMPKIFTMFSSFS+ASLALPGMSGFVAE VVFFGLI S K+LLMPKILI FV
Sbjct: 362 DEMGGITIPMPKIFTMFSSFSLASLALPGMSGFVAEFVVFFGLIMSPKFLLMPKILITFV 421
Query: 1775 AAIGMILTPIY 1807
AIGMILTPIY
Sbjct: 422 TAIGMILTPIY 432
Score = 101 bits (251), Expect(2) = 0.0
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
QMFYGYKQF+S NSHF DSGPRELF+SICIFLPVIGIGIYPDFV SLSIDKV
Sbjct: 439 QMFYGYKQFNSQNSHFLDSGPRELFLSICIFLPVIGIGIYPDFVLSLSIDKV 490
>ref|YP_009163068.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast)
[Sinopodophyllum hexandrum] gi|909719789|gb|AKT94057.1|
NADH-plastoquinone oxidoreductase subunit 4 (chloroplast)
[Sinopodophyllum hexandrum]
Length = 506
Score = 762 bits (1967), Expect(2) = 0.0
Identities = 377/438 (86%), Positives = 390/438 (89%)
Frame = +2
Query: 494 VYLVFTTNDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTAYVFCYH 673
+YLVFTTN FPWLTIIVVLPIFAG+ I F PHRGNK IRWYTICIC T Y FCYH
Sbjct: 1 MYLVFTTNYFPWLTIIVVLPIFAGSSILFLPHRGNKTIRWYTICICLLELLLTTYAFCYH 60
Query: 674 FQLDDPLIQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLF 853
FQLDDPLIQLEQDYKWI+ F FHWRLGIDGLS+GPILLTGFITTLATLAAWPVTRDSRLF
Sbjct: 61 FQLDDPLIQLEQDYKWINIFDFHWRLGIDGLSLGPILLTGFITTLATLAAWPVTRDSRLF 120
Query: 854 HFLMLAMYSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFILYTAGG 1033
HFLMLAMYSGQIG F+SRDLLLFFIMWELELIPVYLLLSMWGGK RLYSATKFILYTAGG
Sbjct: 121 HFLMLAMYSGQIGSFASRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSATKFILYTAGG 180
Query: 1034 SIFXXXXXXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPIIPLHTWL 1213
SIF SNEPTLNFET ANQSYPVALEII Y GF IAYAVKLPIIPLHTWL
Sbjct: 181 SIFLLMGVPGMGLYGSNEPTLNFETSANQSYPVALEIILYLGFFIAYAVKLPIIPLHTWL 240
Query: 1214 PDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYAAST 1393
PDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMI+GTIQIIYAAST
Sbjct: 241 PDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIVGTIQIIYAAST 300
Query: 1394 SLGQRNLKKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFLAGTSYD 1573
S GQRNLKKRIAYSSVSHM TDTGLNG ILQMISHGFIGAALFFLAGTSYD
Sbjct: 301 SPGQRNLKKRIAYSSVSHMGFIIIGISSITDTGLNGVILQMISHGFIGAALFFLAGTSYD 360
Query: 1574 RIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSRKYLLMP 1753
R+RLVYLDEMGG+AIPMPKIFT+FSSFSMASLALPGMSGFVAELVVFFG+ITS+K+ LMP
Sbjct: 361 RLRLVYLDEMGGVAIPMPKIFTLFSSFSMASLALPGMSGFVAELVVFFGIITSQKFFLMP 420
Query: 1754 KILIIFVAAIGMILTPIY 1807
KILI FV A+GMILTPIY
Sbjct: 421 KILITFVTAVGMILTPIY 438
Score = 98.2 bits (243), Expect(2) = 0.0
Identities = 45/52 (86%), Positives = 48/52 (92%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
Q+FYGYKQF+ PNS F DSGPRELFVSICI LPVIGIGIYPDFVFSLS+DKV
Sbjct: 445 QIFYGYKQFNVPNSQFLDSGPRELFVSICILLPVIGIGIYPDFVFSLSVDKV 496
>ref|YP_007353821.1| NADH dehydrogenase subunit 4 (chloroplast) [Chrysanthemum x
morifolium] gi|452849105|ref|YP_007474783.1| NADH
dehydrogenase subunit 4 (chloroplast) [Chrysanthemum
indicum] gi|372863260|gb|AEX99332.1| NADH dehydrogenase
subunit 4 (chloroplast) [Chrysanthemum indicum]
gi|372863500|gb|AEX99569.1| NADH dehydrogenase subunit 4
(chloroplast) [Chrysanthemum indicum]
gi|375298891|gb|AFA45330.1| NADH dehydrogenase subunit 4
(chloroplast) [Chrysanthemum x morifolium]
Length = 512
Score = 764 bits (1973), Expect(2) = 0.0
Identities = 377/442 (85%), Positives = 394/442 (89%)
Frame = +2
Query: 482 FLVKVYLVFTTNDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTAYV 661
FLV+ YLVFTTN FPWLTIIVVLPIFAG+ IFF PH+GN+VIRWYTICIC T YV
Sbjct: 3 FLVQAYLVFTTNKFPWLTIIVVLPIFAGSLIFFLPHKGNRVIRWYTICICMLELLLTTYV 62
Query: 662 FCYHFQLDDPLIQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRD 841
FCYHFQLDDPLIQL DYKWI+FF F W+LGIDGLSIGP+LLTGFITTLATLAAWPVTRD
Sbjct: 63 FCYHFQLDDPLIQLVDDYKWINFFDFRWKLGIDGLSIGPVLLTGFITTLATLAAWPVTRD 122
Query: 842 SRLFHFLMLAMYSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFILY 1021
SRLFHFLMLAMYSGQIG FSSRDLLLFFIMWELELIPVYLLLSMWGGK RLYSATKFILY
Sbjct: 123 SRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILY 182
Query: 1022 TAGGSIFXXXXXXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPIIPL 1201
TAGGSIF SNEPTLNFET NQSYPVALEIIFY GF IA+AVKLPI+PL
Sbjct: 183 TAGGSIFLLMGVLGIGLYGSNEPTLNFETSVNQSYPVALEIIFYIGFFIAFAVKLPILPL 242
Query: 1202 HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIY 1381
HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPWLMI+GTIQIIY
Sbjct: 243 HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIVGTIQIIY 302
Query: 1382 AASTSLGQRNLKKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFLAG 1561
AASTS GQRNLKKRIAYSSVSHM TDTGLNGAILQ+ISHGFIGAALFFLAG
Sbjct: 303 AASTSPGQRNLKKRIAYSSVSHMGFILIGIASITDTGLNGAILQIISHGFIGAALFFLAG 362
Query: 1562 TSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSRKY 1741
TSYDRIRLVYLDEMGG+AIPMPKIFTMFSSFSMASLALPGMSGFVAE++VF G+ITS+KY
Sbjct: 363 TSYDRIRLVYLDEMGGVAIPMPKIFTMFSSFSMASLALPGMSGFVAEVIVFLGIITSQKY 422
Query: 1742 LLMPKILIIFVAAIGMILTPIY 1807
LLMPKI I FV AIGMILTPIY
Sbjct: 423 LLMPKIAITFVMAIGMILTPIY 444
Score = 93.6 bits (231), Expect(2) = 0.0
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
QMFYGYK F++PNS+ FDSGPRELFVSI IFLPVIGIG+YPDFV SLS+DKV
Sbjct: 451 QMFYGYKLFNTPNSYVFDSGPRELFVSISIFLPVIGIGMYPDFVLSLSVDKV 502
>gb|ADD29815.1| NADH-plastoquinone oxidoreductase subunit 4 protein (chloroplast)
[Meliosma aff. cuneifolia Moore 333]
Length = 500
Score = 753 bits (1945), Expect(2) = 0.0
Identities = 375/431 (87%), Positives = 389/431 (90%)
Frame = +2
Query: 515 NDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTAYVFCYHFQLDDPL 694
N FPWLTIIVVLPI AG+ IFF P+RGNKVIRWYTICIC T Y FCYHFQLDDPL
Sbjct: 2 NYFPWLTIIVVLPISAGSLIFFLPYRGNKVIRWYTICICLLELLLTTYAFCYHFQLDDPL 61
Query: 695 IQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAM 874
IQLE++YKWI+FF FHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAM
Sbjct: 62 IQLEEEYKWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAM 121
Query: 875 YSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFILYTAGGSIFXXXX 1054
YSGQIG FSSRDLLLFFIMWELELIPVYLLLSMWGGK RLYSATKFILYTAGGSIF
Sbjct: 122 YSGQIGSFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLMG 181
Query: 1055 XXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPIIPLHTWLPDTHGEA 1234
SNEPTLNFET A+QSYPVALEIIFYFGFLIAYAVK PIIPLHTWLPDTHGEA
Sbjct: 182 VSGMGLYGSNEPTLNFETSASQSYPVALEIIFYFGFLIAYAVKSPIIPLHTWLPDTHGEA 241
Query: 1235 HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNL 1414
HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYAASTS GQRNL
Sbjct: 242 HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSPGQRNL 301
Query: 1415 KKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYL 1594
KKRIAYSSVSHM TDTGLNGAILQ+ISHGFIGAALFFLAGTSYDRIRLVYL
Sbjct: 302 KKRIAYSSVSHMGFTIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYL 361
Query: 1595 DEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSRKYLLMPKILIIFV 1774
DEMGGIAIPMPKIF MFSSFSMASLALPGMSGFVAEL+VFFG+ITS+KYL++PKI+IIFV
Sbjct: 362 DEMGGIAIPMPKIFMMFSSFSMASLALPGMSGFVAELIVFFGIITSQKYLVLPKIVIIFV 421
Query: 1775 AAIGMILTPIY 1807
A+GMILTPIY
Sbjct: 422 MAVGMILTPIY 432
Score = 94.0 bits (232), Expect(2) = 0.0
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
QMFYGYK F++PN FFDSGPRELFVSI IFLPVIGIGIYPDFV SLS+DKV
Sbjct: 439 QMFYGYKLFNAPNYSFFDSGPRELFVSISIFLPVIGIGIYPDFVLSLSVDKV 490
>gb|AIG52126.1| NADH dehydrogenase subunit 4, partial (chloroplast) [Sabazia
sarmentosa]
Length = 500
Score = 752 bits (1942), Expect(2) = 0.0
Identities = 369/432 (85%), Positives = 387/432 (89%)
Frame = +2
Query: 512 TNDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTAYVFCYHFQLDDP 691
TN FPWLTIIVVLPIFAG+FIFF PH+GN+VIRWYTICIC T Y FCYHFQLDDP
Sbjct: 1 TNKFPWLTIIVVLPIFAGSFIFFLPHKGNRVIRWYTICICMLELLLTTYAFCYHFQLDDP 60
Query: 692 LIQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA 871
LIQL +DYKWI+FF F W+LGIDGLSIGP+LLTGFITTLATLAAWPVTRDSRLFHFLMLA
Sbjct: 61 LIQLVEDYKWINFFDFRWKLGIDGLSIGPVLLTGFITTLATLAAWPVTRDSRLFHFLMLA 120
Query: 872 MYSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFILYTAGGSIFXXX 1051
MYSGQIG FSSRDLLLFFIMWELELIPVYLLLSMWGGK RLYSATKFILYTAGGSIF
Sbjct: 121 MYSGQIGSFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLM 180
Query: 1052 XXXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPIIPLHTWLPDTHGE 1231
SNEPTLNFET NQSYPVALEIIFY GF IA+AVKLPI+PLHTWLPDTHGE
Sbjct: 181 GVLGVGLYGSNEPTLNFETSVNQSYPVALEIIFYIGFFIAFAVKLPILPLHTWLPDTHGE 240
Query: 1232 AHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRN 1411
AHYSTCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPWLM++GTIQIIYAASTSLGQRN
Sbjct: 241 AHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMVVGTIQIIYAASTSLGQRN 300
Query: 1412 LKKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVY 1591
LKKRIAYSSVSHM TDTGLNGAILQ+ISHGFIGAALFFLAGTSYDRIRLVY
Sbjct: 301 LKKRIAYSSVSHMGFILIGIASITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVY 360
Query: 1592 LDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSRKYLLMPKILIIF 1771
LDEMGG+AIPMPKIFTMFSSFSMASLALPGMSGFVAE++VF G+ITS+KYLLMPKI I F
Sbjct: 361 LDEMGGVAIPMPKIFTMFSSFSMASLALPGMSGFVAEVIVFLGIITSQKYLLMPKIAITF 420
Query: 1772 VAAIGMILTPIY 1807
V AIGMILTPIY
Sbjct: 421 VMAIGMILTPIY 432
Score = 95.1 bits (235), Expect(2) = 0.0
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
QMFYGYK F+ PNS+FFDSGPRELFVSI IFLPVIGIG+YPDFV SLS+DKV
Sbjct: 439 QMFYGYKLFNIPNSYFFDSGPRELFVSISIFLPVIGIGMYPDFVLSLSVDKV 490
>prf||1211235CP NADH dehydrogenase 4-like ORF 509B
Length = 509
Score = 757 bits (1954), Expect(2) = 0.0
Identities = 373/441 (84%), Positives = 391/441 (88%)
Frame = +2
Query: 485 LVKVYLVFTTNDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTAYVF 664
+V+VYLVFTTN FPWLTIIVV PIFAG+ IFF PH+GN+VIRWYTICIC T Y F
Sbjct: 1 MVQVYLVFTTNYFPWLTIIVVFPIFAGSLIFFLPHKGNRVIRWYTICICILELLLTTYAF 60
Query: 665 CYHFQLDDPLIQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS 844
CYHFQ DDPLIQL +DYKWI+FF FHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS
Sbjct: 61 CYHFQSDDPLIQLVEDYKWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS 120
Query: 845 RLFHFLMLAMYSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFILYT 1024
RLFHFLMLAMYSGQIG FSSRDLLLFFIMWELELIPVYLLL MWGGK RLYSATKFILYT
Sbjct: 121 RLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSATKFILYT 180
Query: 1025 AGGSIFXXXXXXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPIIPLH 1204
AGGS+F SNEPTLNFET NQSYPV LEIIFY GF IA+AVK PIIPLH
Sbjct: 181 AGGSVFLLMGVLGLALYGSNEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLH 240
Query: 1205 TWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYA 1384
TWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPWLMIIGTIQIIYA
Sbjct: 241 TWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYA 300
Query: 1385 ASTSLGQRNLKKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFLAGT 1564
A TSLGQRNLKKRIAYSSVSHM TDTGLNGA+LQ+ISHGFIGAALFFLAGT
Sbjct: 301 ALTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGT 360
Query: 1565 SYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSRKYL 1744
+YDRIRLVYLDEMGGIAIPMPK+FTMFSSFSMASLALPGMSGFVAEL+VFFG+IT +KYL
Sbjct: 361 TYDRIRLVYLDEMGGIAIPMPKMFTMFSSFSMASLALPGMSGFVAELIVFFGIITGQKYL 420
Query: 1745 LMPKILIIFVAAIGMILTPIY 1807
L+PKILI FV AIGMILTPIY
Sbjct: 421 LIPKILITFVMAIGMILTPIY 441
Score = 90.1 bits (222), Expect(2) = 0.0
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
QMFYGYK F++P FFDSGPRELF+SI IFLPVIGIGIYPDFV SL++DKV
Sbjct: 448 QMFYGYKLFNAPKDSFFDSGPRELFLSISIFLPVIGIGIYPDFVLSLAVDKV 499
>ref|YP_009048340.1| NADH-plastoquinone oxidoreductase chain 4 (chloroplast) [Magnolia
yunnanensis] gi|573015519|gb|AHF72097.1|
NADH-plastoquinone oxidoreductase chain 4 (chloroplast)
[Magnolia yunnanensis]
Length = 501
Score = 749 bits (1933), Expect(2) = 0.0
Identities = 376/432 (87%), Positives = 386/432 (89%)
Frame = +2
Query: 512 TNDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTAYVFCYHFQLDDP 691
T+ FPWLTIIVVLPI AG+ IF FPHRGNKV+RWYTICIC T Y FCYHFQLDDP
Sbjct: 2 TSYFPWLTIIVVLPISAGSSIFCFPHRGNKVVRWYTICICLLELLLTTYAFCYHFQLDDP 61
Query: 692 LIQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA 871
LIQLE+DYKWI+ F FHWRLGIDGLSIGPILLTGFITTLATLAA PVTRDSRLFHFLMLA
Sbjct: 62 LIQLEEDYKWINIFDFHWRLGIDGLSIGPILLTGFITTLATLAARPVTRDSRLFHFLMLA 121
Query: 872 MYSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFILYTAGGSIFXXX 1051
MYSGQIG FSSRDLLLFFIMWELELIPVYLLLSMWGGK RLYSATKFILYTAGGSIF
Sbjct: 122 MYSGQIGSFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLM 181
Query: 1052 XXXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPIIPLHTWLPDTHGE 1231
SNEPTLNFET ANQSYP+ALEI+FYFGFLIAYAVKLPIIPLHTWLPDTHGE
Sbjct: 182 GVPGMGLYGSNEPTLNFETSANQSYPLALEILFYFGFLIAYAVKLPIIPLHTWLPDTHGE 241
Query: 1232 AHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRN 1411
AHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMI+GTIQIIYAASTS GQ N
Sbjct: 242 AHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIVGTIQIIYAASTSSGQSN 301
Query: 1412 LKKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVY 1591
LKKRIAYSSVSHM TDTGLNGAILQ+ISHGFIGAALFFLAGTSYDRIRLVY
Sbjct: 302 LKKRIAYSSVSHMGFTIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVY 361
Query: 1592 LDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSRKYLLMPKILIIF 1771
LDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAE VVFFG+ITS KYLLMPKILI F
Sbjct: 362 LDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAESVVFFGIITSPKYLLMPKILITF 421
Query: 1772 VAAIGMILTPIY 1807
V AIGMILTPIY
Sbjct: 422 VMAIGMILTPIY 433
Score = 97.8 bits (242), Expect(2) = 0.0
Identities = 45/52 (86%), Positives = 48/52 (92%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
QMFYGYK F+ PNS+F DSGPRELFVSICIFLPVIGIGIYPDFV SLS+DKV
Sbjct: 440 QMFYGYKLFNVPNSYFLDSGPRELFVSICIFLPVIGIGIYPDFVLSLSVDKV 491
>ref|YP_008592696.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Berberis
bealei] gi|536462737|gb|AGU37102.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Berberis bealei]
Length = 517
Score = 754 bits (1948), Expect(2) = 0.0
Identities = 375/444 (84%), Positives = 391/444 (88%)
Frame = +2
Query: 476 RVFLVKVYLVFTTNDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTA 655
R FL K YLVFTTN FPWLTIIV+ PI AG+ I F PHRGNKVIRWYTI IC T
Sbjct: 6 RGFLAKAYLVFTTNSFPWLTIIVIFPILAGSSILFLPHRGNKVIRWYTISICLLELLLTT 65
Query: 656 YVFCYHFQLDDPLIQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVT 835
Y F YHF+LDDPLIQLEQD+KWI+FF FHWRLGIDGLSIGPILLTGFITTLATLAAWPVT
Sbjct: 66 YAFSYHFKLDDPLIQLEQDFKWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVT 125
Query: 836 RDSRLFHFLMLAMYSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFI 1015
RDSRLFHFLMLAMYSGQIG FSSRDLLLFFIMWELELIPVYLLL+MWGGK RLYSATKFI
Sbjct: 126 RDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLAMWGGKKRLYSATKFI 185
Query: 1016 LYTAGGSIFXXXXXXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPII 1195
LYTAGGSIF SNEPTLNFET ANQSYP+ALEIIFYFGF IAYAVKLPII
Sbjct: 186 LYTAGGSIFLLMGVPGMGLYGSNEPTLNFETSANQSYPIALEIIFYFGFFIAYAVKLPII 245
Query: 1196 PLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQI 1375
PLHTWLP+THGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHS+FSPWL+I+G QI
Sbjct: 246 PLHTWLPNTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSLFSPWLIIMGIFQI 305
Query: 1376 IYAASTSLGQRNLKKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFL 1555
IYAASTS GQRNLKKRIAYSSVSHM TDTGLNGAILQMISHGFIGAALFFL
Sbjct: 306 IYAASTSPGQRNLKKRIAYSSVSHMGFTIIGISSITDTGLNGAILQMISHGFIGAALFFL 365
Query: 1556 AGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSR 1735
AGTSYDRIRLVYLDEMGGIAIPMPKIFT+FSSFSMASLALPGMSGFVAEL+VFF +ITS+
Sbjct: 366 AGTSYDRIRLVYLDEMGGIAIPMPKIFTLFSSFSMASLALPGMSGFVAELIVFFSIITSQ 425
Query: 1736 KYLLMPKILIIFVAAIGMILTPIY 1807
K+ LMPKILI FV AIGMILTPIY
Sbjct: 426 KFFLMPKILITFVTAIGMILTPIY 449
Score = 91.7 bits (226), Expect(2) = 0.0
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
Q+FYGYKQF+ P S+ DSGPRELFVSICI LPVIGIGIYPDFVF+LS+DKV
Sbjct: 456 QIFYGYKQFNVPISNLLDSGPRELFVSICILLPVIGIGIYPDFVFALSVDKV 507
>ref|YP_740615.1| NADH-plastoquinone oxidoreductase subunit 4 [Platanus occidentalis]
gi|122165993|sp|Q09FZ6.1|NU4C_PLAOC RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase, chain
4; AltName: Full=NADH-plastoquinone oxidoreductase chain
4 gi|114054435|gb|ABI49829.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Platanus
occidentalis]
Length = 500
Score = 749 bits (1933), Expect(2) = 0.0
Identities = 373/431 (86%), Positives = 383/431 (88%)
Frame = +2
Query: 515 NDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTAYVFCYHFQLDDPL 694
N FPWLTIIVVLPI AG+ IFF PHRGNK IRWYTICIC YVFCYHFQLDDPL
Sbjct: 2 NFFPWLTIIVVLPISAGSLIFFLPHRGNKAIRWYTICICLLELLLITYVFCYHFQLDDPL 61
Query: 695 IQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAM 874
IQLE+DYKWI+ F FHWRLGIDGLSIGPILLTGFITTLATLAAWP+TRDSRLFHFLMLAM
Sbjct: 62 IQLEEDYKWINIFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPITRDSRLFHFLMLAM 121
Query: 875 YSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFILYTAGGSIFXXXX 1054
YSGQIG FSSRDLLLFFIMWELELIPVYLLLSMWGGK RLYSATKFILYTAGGSIF
Sbjct: 122 YSGQIGSFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLMG 181
Query: 1055 XXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPIIPLHTWLPDTHGEA 1234
SNEPTLNFET ANQSYPVALEI+FYFGFLIAYAVK PIIPLHTWLPDTHGEA
Sbjct: 182 VLGMGLYGSNEPTLNFETSANQSYPVALEIMFYFGFLIAYAVKSPIIPLHTWLPDTHGEA 241
Query: 1235 HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNL 1414
HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMI+GTIQIIYAASTS GQRNL
Sbjct: 242 HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIVGTIQIIYAASTSPGQRNL 301
Query: 1415 KKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYL 1594
KKRIAYSSVSHM TD GLNGA+LQ+ISHGFIGAALFFLAGTSYDRIRLVYL
Sbjct: 302 KKRIAYSSVSHMGFTIIGIGSITDAGLNGAVLQIISHGFIGAALFFLAGTSYDRIRLVYL 361
Query: 1595 DEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSRKYLLMPKILIIFV 1774
DEMGGIAI MPKIFTMFSSFSMASLALPGMSGFVAEL+VFFG+ITS KY LMPKILI FV
Sbjct: 362 DEMGGIAISMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGIITSPKYFLMPKILITFV 421
Query: 1775 AAIGMILTPIY 1807
AIGMILTPIY
Sbjct: 422 MAIGMILTPIY 432
Score = 97.4 bits (241), Expect(2) = 0.0
Identities = 45/52 (86%), Positives = 49/52 (94%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
QMFYGYK F++PNS+FFDSGPRELFVSI IFLPVIGIGIYPDFV SLS+DKV
Sbjct: 439 QMFYGYKLFNAPNSYFFDSGPRELFVSISIFLPVIGIGIYPDFVLSLSVDKV 490
>ref|YP_004465243.1| NADH-plastoquinone oxidoreductase subunit 4 [Jacobaea vulgaris]
gi|308156139|gb|ADO15467.1| NADH-plastoquinone
oxidoreductase subunit 4 [Jacobaea vulgaris]
Length = 506
Score = 753 bits (1944), Expect(2) = 0.0
Identities = 370/438 (84%), Positives = 388/438 (88%)
Frame = +2
Query: 494 VYLVFTTNDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTAYVFCYH 673
+YLVFTTN+FPWLTIIVVLPIFAG+ IFF PH+GN+ IRWYTICIC T Y FCYH
Sbjct: 1 MYLVFTTNNFPWLTIIVVLPIFAGSLIFFLPHKGNRTIRWYTICICMLELLLTTYAFCYH 60
Query: 674 FQLDDPLIQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLF 853
FQ DDPLIQL +DYKWI FF F W+LGIDGLSIGP+LLTGFITTLATLAAWPVTRDSRLF
Sbjct: 61 FQFDDPLIQLVEDYKWISFFDFRWKLGIDGLSIGPVLLTGFITTLATLAAWPVTRDSRLF 120
Query: 854 HFLMLAMYSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFILYTAGG 1033
HFLMLAMYSGQIG FSSRDLLLFFIMWELELIPVYLLL MWGGK RLYSATKFILYTAGG
Sbjct: 121 HFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSATKFILYTAGG 180
Query: 1034 SIFXXXXXXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPIIPLHTWL 1213
SIF SNEPTLNFET NQSYPVALEIIFY GF IA+AVKLPI+PLHTWL
Sbjct: 181 SIFLLMGVLGVGLYGSNEPTLNFETSVNQSYPVALEIIFYIGFFIAFAVKLPILPLHTWL 240
Query: 1214 PDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYAAST 1393
PDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPWLMI+GTIQIIYAAST
Sbjct: 241 PDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIVGTIQIIYAAST 300
Query: 1394 SLGQRNLKKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFLAGTSYD 1573
S GQRNLKKRIAYSSVSHM TDTGLNGAILQ+ISHGFIGAALFFLAGTSYD
Sbjct: 301 SPGQRNLKKRIAYSSVSHMGFILIGIASITDTGLNGAILQIISHGFIGAALFFLAGTSYD 360
Query: 1574 RIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSRKYLLMP 1753
RIRLVYLDEMGG+AIPMPKIFTMFSSFSMASLALPGMSGFVAE++VF G+ITS+KYLLMP
Sbjct: 361 RIRLVYLDEMGGVAIPMPKIFTMFSSFSMASLALPGMSGFVAEVIVFLGIITSQKYLLMP 420
Query: 1754 KILIIFVAAIGMILTPIY 1807
KI I FV AIGMILTPIY
Sbjct: 421 KIAITFVMAIGMILTPIY 438
Score = 92.8 bits (229), Expect(2) = 0.0
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
QMFYGYK F++PNS FDSGPRELFVSI IFLPVIGIG+YPDFV SLS+DKV
Sbjct: 445 QMFYGYKLFNTPNSFVFDSGPRELFVSISIFLPVIGIGLYPDFVLSLSVDKV 496
>ref|YP_740252.1| NADH-plastoquinone oxidoreductase subunit 4 [Liriodendron tulipifera]
gi|122227463|sp|Q0G9G9.1|NU4C_LIRTU RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase, chain
4; AltName: Full=NADH-plastoquinone oxidoreductase chain
4 gi|113201044|gb|ABI32559.1| NADH-plastoquinone
oxidoreductase subunit 4 [Liriodendron tulipifera]
Length = 500
Score = 748 bits (1931), Expect(2) = 0.0
Identities = 375/429 (87%), Positives = 384/429 (89%)
Frame = +2
Query: 521 FPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTAYVFCYHFQLDDPLIQ 700
FPWLTIIVVLPIFAG+ IFFFPHRGNKV+RWYTICIC T Y FCYHFQLDDPLIQ
Sbjct: 4 FPWLTIIVVLPIFAGSSIFFFPHRGNKVVRWYTICICLLELLLTTYAFCYHFQLDDPLIQ 63
Query: 701 LEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAMYS 880
LE+DYKWI+ F FHWRLGIDGLSIGPILLTGFITTLATLAA PVTRDSRLFHFLMLAMYS
Sbjct: 64 LEEDYKWINIFDFHWRLGIDGLSIGPILLTGFITTLATLAARPVTRDSRLFHFLMLAMYS 123
Query: 881 GQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFILYTAGGSIFXXXXXX 1060
GQIG FSSRDLLLFFIMWELELIPVYLLLSMWGGK RLYSATKFILYTAGGSIF
Sbjct: 124 GQIGSFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLMGVP 183
Query: 1061 XXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPIIPLHTWLPDTHGEAHY 1240
SNEP LNFET ANQSYP+ALEIIFYFGFLIAYAVK PIIPLHTWLPDTHGEAHY
Sbjct: 184 GMGLYGSNEPILNFETSANQSYPLALEIIFYFGFLIAYAVKSPIIPLHTWLPDTHGEAHY 243
Query: 1241 STCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKK 1420
STCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMI+GTIQIIYAASTS GQ NLKK
Sbjct: 244 STCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIVGTIQIIYAASTSSGQSNLKK 303
Query: 1421 RIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYLDE 1600
RIAYSSVSHM TDTGLNGAILQ+ISHGFIGAALFFLAGTSYDRIRLVYLDE
Sbjct: 304 RIAYSSVSHMGFTIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDE 363
Query: 1601 MGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSRKYLLMPKILIIFVAA 1780
MGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAE VVF+G+ITS KYLLMPKILI FV A
Sbjct: 364 MGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAESVVFWGIITSPKYLLMPKILITFVMA 423
Query: 1781 IGMILTPIY 1807
IGMILTPIY
Sbjct: 424 IGMILTPIY 432
Score = 97.8 bits (242), Expect(2) = 0.0
Identities = 45/52 (86%), Positives = 48/52 (92%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
QMFYGYK F+ PNS+F DSGPRELFVSICIFLPVIGIGIYPDFV SLS+DKV
Sbjct: 439 QMFYGYKLFNVPNSYFLDSGPRELFVSICIFLPVIGIGIYPDFVLSLSVDKV 490
>gb|ACB29120.1| NADH dehydrogenase subunit D, partial (chloroplast) [Acicarpha
spathulata]
Length = 503
Score = 752 bits (1941), Expect(2) = 0.0
Identities = 370/432 (85%), Positives = 388/432 (89%)
Frame = +2
Query: 512 TNDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTAYVFCYHFQLDDP 691
TN+FPWLTIIVVLPIFAG+ IFF PH+GN+VIRWYTICIC T Y FCYHFQLDDP
Sbjct: 1 TNNFPWLTIIVVLPIFAGSLIFFLPHKGNRVIRWYTICICMLELLLTTYAFCYHFQLDDP 60
Query: 692 LIQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA 871
LIQL +DYKWI+FF F W+LGIDGLSIGP+LLTGFITTLATLAAWPVTRDSRLFHFLMLA
Sbjct: 61 LIQLVEDYKWINFFDFRWKLGIDGLSIGPVLLTGFITTLATLAAWPVTRDSRLFHFLMLA 120
Query: 872 MYSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFILYTAGGSIFXXX 1051
MYSGQIG FSSRDLLLFFIMWELELIPVYLLLSMWGGK RLYSATKFILYTAGGSIF
Sbjct: 121 MYSGQIGSFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLM 180
Query: 1052 XXXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPIIPLHTWLPDTHGE 1231
SNEPTLNFETLANQSYPVALEIIFY GF IA+AVK PI+PLHTWLPDTHGE
Sbjct: 181 GVLGVGLYGSNEPTLNFETLANQSYPVALEIIFYIGFFIAFAVKSPILPLHTWLPDTHGE 240
Query: 1232 AHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRN 1411
AHYSTCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPWLMI+GTIQIIYAASTS GQRN
Sbjct: 241 AHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIVGTIQIIYAASTSPGQRN 300
Query: 1412 LKKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVY 1591
LKKRIAYSSVSHM TD GLNGAILQ+ISHGFIGAALFFLAGTSYDRIRLVY
Sbjct: 301 LKKRIAYSSVSHMGFILIGIASITDMGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVY 360
Query: 1592 LDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSRKYLLMPKILIIF 1771
LDEMGG+AIPMPKIFTMFSSFSMASLALPGMSGFVAE++VFFG+ITS+KYLLMPKI IIF
Sbjct: 361 LDEMGGVAIPMPKIFTMFSSFSMASLALPGMSGFVAEVIVFFGIITSQKYLLMPKIAIIF 420
Query: 1772 VAAIGMILTPIY 1807
V AIGMILTPIY
Sbjct: 421 VMAIGMILTPIY 432
Score = 93.6 bits (231), Expect(2) = 0.0
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
QMFYGYK F++PNS+ FDSGPRELFVSI IFLPVIGIG+YPDFV SLS+DKV
Sbjct: 439 QMFYGYKLFNTPNSYVFDSGPRELFVSISIFLPVIGIGMYPDFVLSLSVDKV 490
>ref|YP_009122912.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Capsicum
lycianthoides] gi|756141214|gb|AJK90795.1|
NADH-plastoquinone oxidoreductase subunit 4 (chloroplast)
[Capsicum lycianthoides]
Length = 506
Score = 754 bits (1948), Expect(2) = 0.0
Identities = 371/438 (84%), Positives = 389/438 (88%)
Frame = +2
Query: 494 VYLVFTTNDFPWLTIIVVLPIFAGTFIFFFPHRGNKVIRWYTICICXXXXXXTAYVFCYH 673
+YLVFTTN FPWLTIIVV PIFAG+ IFF PH+GN+VIRWYTICIC T Y FCYH
Sbjct: 1 MYLVFTTNYFPWLTIIVVFPIFAGSLIFFLPHKGNRVIRWYTICICILELLLTTYAFCYH 60
Query: 674 FQLDDPLIQLEQDYKWIHFFYFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLF 853
FQ DDPLIQL +DYKWI FF FHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLF
Sbjct: 61 FQSDDPLIQLVEDYKWIDFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLF 120
Query: 854 HFLMLAMYSGQIGPFSSRDLLLFFIMWELELIPVYLLLSMWGGKNRLYSATKFILYTAGG 1033
HFLMLAMYSGQIG FSSRDLLLFFIMWELELIPVYLLL+MWGGK RLYSATKFILYTAGG
Sbjct: 121 HFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLAMWGGKKRLYSATKFILYTAGG 180
Query: 1034 SIFXXXXXXXXXXXXSNEPTLNFETLANQSYPVALEIIFYFGFLIAYAVKLPIIPLHTWL 1213
S+F SNEPTLNFET NQSYPV LEIIFY GF IA+AVK PIIPLHTWL
Sbjct: 181 SVFLLMGVLGVALYGSNEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWL 240
Query: 1214 PDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGTIQIIYAAST 1393
PDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPWLMIIGTIQIIYAAST
Sbjct: 241 PDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYAAST 300
Query: 1394 SLGQRNLKKRIAYSSVSHMXXXXXXXXXXTDTGLNGAILQMISHGFIGAALFFLAGTSYD 1573
SLGQRNLKKRIAYSSVSHM TDTGLNGA+LQ+ISHGFIGAALFFLAGT+YD
Sbjct: 301 SLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYD 360
Query: 1574 RIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSRKYLLMP 1753
RIRLVYLDEMGGIAIPMPK+FTMFSSFSMASLALPGMSGFVAEL+VFFG+IT +KYLL+P
Sbjct: 361 RIRLVYLDEMGGIAIPMPKMFTMFSSFSMASLALPGMSGFVAELIVFFGIITGQKYLLIP 420
Query: 1754 KILIIFVAAIGMILTPIY 1807
K+LI FV AIGMILTPIY
Sbjct: 421 KLLITFVMAIGMILTPIY 438
Score = 90.5 bits (223), Expect(2) = 0.0
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = +1
Query: 1834 QMFYGYKQFHSPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSIDKV 1989
QMFYGYK F++P FFDSGPRELF+SI IFLPVIGIGIYPDFV SL+IDKV
Sbjct: 445 QMFYGYKLFNAPKDSFFDSGPRELFLSISIFLPVIGIGIYPDFVLSLAIDKV 496