BLASTX nr result

ID: Aconitum23_contig00009673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00009673
         (425 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010275281.1| PREDICTED: pentatricopeptide repeat-containi...    60   8e-07
ref|XP_011072243.1| PREDICTED: pentatricopeptide repeat-containi...    56   9e-06

>ref|XP_010275281.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
           chloroplastic [Nelumbo nucifera]
          Length = 707

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 40/81 (49%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
 Frame = +1

Query: 187 QPIFFSSSTSLKRPTKRFLILCNSKTPSEAPSLQQEQPPNQSLADQLKPLTLTLLSDT-- 360
           +P F SS   L+  TKRF + C  K+PSE    +Q    N SL+DQLKPL+LTLLSDT  
Sbjct: 23  KPSFLSSP--LRLSTKRFTVFC--KSPSEIAEPRQ----NPSLSDQLKPLSLTLLSDTKD 74

Query: 361 QXXXXXXXXXXXXTWVNPSKP 423
           Q            TWVNPSKP
Sbjct: 75  QQPQPTLLSKPKSTWVNPSKP 95


>ref|XP_011072243.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
           chloroplastic [Sesamum indicum]
          Length = 727

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 44/108 (40%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
 Frame = +1

Query: 106 IPSSPGFSMAASSLVPTAVLERHNSKTQPIFFSSSTSLKRPTK-RFLILCN-SKTPSEAP 279
           + SS  FSMA +  + TA+   H+S T       +  L  PTK RF + CN SK     P
Sbjct: 10  LSSSTPFSMATN--LSTALASYHHS-TDANRRRITAPLPLPTKKRFGVSCNVSKRAPSPP 66

Query: 280 SLQQEQPPNQSLADQLKPLTLTLLSDTQXXXXXXXXXXXXTWVNPSKP 423
           S   E+    SLADQLKPL+ T+L+D Q            TWVNP+KP
Sbjct: 67  SAVAEEQKGPSLADQLKPLSTTILAD-QPSETHLLSKPKSTWVNPTKP 113


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