BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00009530
         (1934 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010241844.1| PREDICTED: RNA polymerase sigma factor sigF,...   606   e-170
ref|XP_010241845.1| PREDICTED: RNA polymerase sigma factor sigF,...   603   e-169
ref|XP_010241843.1| PREDICTED: RNA polymerase sigma factor sigF,...   603   e-169
ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF,...   591   e-166
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,...   536   e-149
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,...   535   e-149
gb|KDO48072.1| hypothetical protein CISIN_1g008352mg [Citrus sin...   534   e-148
ref|XP_011018731.1| PREDICTED: RNA polymerase sigma factor sigF,...   534   e-148
ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,...   530   e-147
gb|KDO48082.1| hypothetical protein CISIN_1g008352mg [Citrus sin...   530   e-147
gb|AKC88770.1| sigma factor [Francoa sonchifolia]                     528   e-147
gb|KDO48074.1| hypothetical protein CISIN_1g008352mg [Citrus sin...   528   e-147
ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protei...   527   e-146
ref|XP_010653602.1| PREDICTED: RNA polymerase sigma factor sigF,...   526   e-146
ref|XP_011018728.1| PREDICTED: RNA polymerase sigma factor sigF,...   525   e-146
emb|CBI32760.3| unnamed protein product [Vitis vinifera]              525   e-146
ref|XP_008243975.1| PREDICTED: RNA polymerase sigma factor sigF,...   523   e-145
gb|KDO48075.1| hypothetical protein CISIN_1g008352mg [Citrus sin...   523   e-145
ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citr...   521   e-145
ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prun...   520   e-144

>ref|XP_010241844.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Nelumbo nucifera]
          Length = 565

 Score =  606 bits (1563), Expect = e-170
 Identities = 333/541 (61%), Positives = 392/541 (72%), Gaps = 13/541 (2%)
 Frame = -2

Query: 1651 TSSVTMLYEQATPAVSS--TISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQ-----R 1496
            +SSVT+L+EQA P V S  T SITRHFPASVLLQEQRD+ R  L I ++DK SQ     R
Sbjct: 24   SSSVTLLHEQANPIVVSMPTTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRR 83

Query: 1495 QTGNGAVFCEEKKSSESDEYIKDFERQLLYWPDS--LNPPLYPGAKQLMSTIALSPYED- 1325
            +  +     EEKKS + D Y + FERQLLYWP    L P LY G K L+S +  S     
Sbjct: 84   KLEDKVHLYEEKKSCQPDRYWEGFERQLLYWPGLWYLLPSLYKGEKPLLSMVTQSTAAGT 143

Query: 1324 -KQVDAEPXXXXXXXXXXXXXXXXXXXXADESNMLGKDFGESFL-SVESTSTTLQIPHEK 1151
             K VD  P                    A +  + G D  ESFL  +E  +   +IP  +
Sbjct: 144  VKNVDVRPCDALELAKKAVLASKQAASLAKDYELFGADSHESFLPDLEPRNLANKIPLRE 203

Query: 1150 EIKVXXXXXXXXXXXXRGVAKPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSGSGT 971
            E+ V            R + +PKVV+ EA   R  D+H+K++E FD NDPLRLFL G  T
Sbjct: 204  EVAVRSKRLLERQSKRRWIPRPKVVVSEASTSRKSDIHKKIHEGFDTNDPLRLFLWGPET 263

Query: 970  RQLLTAKEESELFVQIQELARLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHLHLG 791
            +QLLT KEESELFV +QEL RLEEVK RL SQF REPTLVEWAEAVGM+C  LQS LH G
Sbjct: 264  KQLLTPKEESELFVHVQELIRLEEVKQRLQSQFDREPTLVEWAEAVGMTCQSLQSILHSG 323

Query: 790  HRSRERMTCANFRLVVHVAKRYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFSTYAY 611
            + SRE++  ANFRLVVHVAK YQG G+NLQDLLQ+GS GLM+S+EKFKPQAGCRF+TYAY
Sbjct: 324  NSSREKIIYANFRLVVHVAKHYQGQGLNLQDLLQEGSMGLMKSLEKFKPQAGCRFATYAY 383

Query: 610  WWIRQSIRKAIFQNSRTIRLPENVYNLLSQVKKAKKECIQEGQEPTKEELARRIGISVEK 431
            WWIRQ+IRKAIFQNSRTIRLPENVY+LLSQVKKAKK  IQEG  PT EELA+R+GI+VEK
Sbjct: 384  WWIRQAIRKAIFQNSRTIRLPENVYSLLSQVKKAKKLFIQEGHHPTNEELAKRVGITVEK 443

Query: 430  FTSLLASTRMPLSMQQPVWADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLNILSP 251
               L  STRMPLS+QQPVWADQDTTFQEITAD+EVE PD CV+KQLMR+HVR+ ++IL P
Sbjct: 444  LERLFMSTRMPLSIQQPVWADQDTTFQEITADTEVEKPDLCVAKQLMRRHVRNLISILPP 503

Query: 250  KERRIIRLRFGIEDGKQNSLSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEAYSDL 71
            KERRIIR+R+GIE+ +  SL +IGS+FG+SKERVRQLE+RAL KLK+C SSQGL AY+DL
Sbjct: 504  KERRIIRMRYGIENNEPKSLQEIGSIFGLSKERVRQLESRALHKLKQCLSSQGLGAYADL 563

Query: 70   L 68
            L
Sbjct: 564  L 564


>ref|XP_010241845.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X3
            [Nelumbo nucifera]
          Length = 540

 Score =  603 bits (1554), Expect = e-169
 Identities = 331/538 (61%), Positives = 389/538 (72%), Gaps = 13/538 (2%)
 Frame = -2

Query: 1642 VTMLYEQATPAVSS--TISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQ-----RQTG 1487
            VT+L+EQA P V S  T SITRHFPASVLLQEQRD+ R  L I ++DK SQ     R+  
Sbjct: 2    VTLLHEQANPIVVSMPTTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLE 61

Query: 1486 NGAVFCEEKKSSESDEYIKDFERQLLYWPDS--LNPPLYPGAKQLMSTIALSPYED--KQ 1319
            +     EEKKS + D Y + FERQLLYWP    L P LY G K L+S +  S      K 
Sbjct: 62   DKVHLYEEKKSCQPDRYWEGFERQLLYWPGLWYLLPSLYKGEKPLLSMVTQSTAAGTVKN 121

Query: 1318 VDAEPXXXXXXXXXXXXXXXXXXXXADESNMLGKDFGESFL-SVESTSTTLQIPHEKEIK 1142
            VD  P                    A +  + G D  ESFL  +E  +   +IP  +E+ 
Sbjct: 122  VDVRPCDALELAKKAVLASKQAASLAKDYELFGADSHESFLPDLEPRNLANKIPLREEVA 181

Query: 1141 VXXXXXXXXXXXXRGVAKPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSGSGTRQL 962
            V            R + +PKVV+ EA   R  D+H+K++E FD NDPLRLFL G  T+QL
Sbjct: 182  VRSKRLLERQSKRRWIPRPKVVVSEASTSRKSDIHKKIHEGFDTNDPLRLFLWGPETKQL 241

Query: 961  LTAKEESELFVQIQELARLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHLHLGHRS 782
            LT KEESELFV +QEL RLEEVK RL SQF REPTLVEWAEAVGM+C  LQS LH G+ S
Sbjct: 242  LTPKEESELFVHVQELIRLEEVKQRLQSQFDREPTLVEWAEAVGMTCQSLQSILHSGNSS 301

Query: 781  RERMTCANFRLVVHVAKRYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFSTYAYWWI 602
            RE++  ANFRLVVHVAK YQG G+NLQDLLQ+GS GLM+S+EKFKPQAGCRF+TYAYWWI
Sbjct: 302  REKIIYANFRLVVHVAKHYQGQGLNLQDLLQEGSMGLMKSLEKFKPQAGCRFATYAYWWI 361

Query: 601  RQSIRKAIFQNSRTIRLPENVYNLLSQVKKAKKECIQEGQEPTKEELARRIGISVEKFTS 422
            RQ+IRKAIFQNSRTIRLPENVY+LLSQVKKAKK  IQEG  PT EELA+R+GI+VEK   
Sbjct: 362  RQAIRKAIFQNSRTIRLPENVYSLLSQVKKAKKLFIQEGHHPTNEELAKRVGITVEKLER 421

Query: 421  LLASTRMPLSMQQPVWADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLNILSPKER 242
            L  STRMPLS+QQPVWADQDTTFQEITAD+EVE PD CV+KQLMR+HVR+ ++IL PKER
Sbjct: 422  LFMSTRMPLSIQQPVWADQDTTFQEITADTEVEKPDLCVAKQLMRRHVRNLISILPPKER 481

Query: 241  RIIRLRFGIEDGKQNSLSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEAYSDLL 68
            RIIR+R+GIE+ +  SL +IGS+FG+SKERVRQLE+RAL KLK+C SSQGL AY+DLL
Sbjct: 482  RIIRMRYGIENNEPKSLQEIGSIFGLSKERVRQLESRALHKLKQCLSSQGLGAYADLL 539


>ref|XP_010241843.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
            [Nelumbo nucifera]
          Length = 568

 Score =  603 bits (1554), Expect = e-169
 Identities = 331/538 (61%), Positives = 389/538 (72%), Gaps = 13/538 (2%)
 Frame = -2

Query: 1642 VTMLYEQATPAVSS--TISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQ-----RQTG 1487
            VT+L+EQA P V S  T SITRHFPASVLLQEQRD+ R  L I ++DK SQ     R+  
Sbjct: 30   VTLLHEQANPIVVSMPTTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLE 89

Query: 1486 NGAVFCEEKKSSESDEYIKDFERQLLYWPDS--LNPPLYPGAKQLMSTIALSPYED--KQ 1319
            +     EEKKS + D Y + FERQLLYWP    L P LY G K L+S +  S      K 
Sbjct: 90   DKVHLYEEKKSCQPDRYWEGFERQLLYWPGLWYLLPSLYKGEKPLLSMVTQSTAAGTVKN 149

Query: 1318 VDAEPXXXXXXXXXXXXXXXXXXXXADESNMLGKDFGESFL-SVESTSTTLQIPHEKEIK 1142
            VD  P                    A +  + G D  ESFL  +E  +   +IP  +E+ 
Sbjct: 150  VDVRPCDALELAKKAVLASKQAASLAKDYELFGADSHESFLPDLEPRNLANKIPLREEVA 209

Query: 1141 VXXXXXXXXXXXXRGVAKPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSGSGTRQL 962
            V            R + +PKVV+ EA   R  D+H+K++E FD NDPLRLFL G  T+QL
Sbjct: 210  VRSKRLLERQSKRRWIPRPKVVVSEASTSRKSDIHKKIHEGFDTNDPLRLFLWGPETKQL 269

Query: 961  LTAKEESELFVQIQELARLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHLHLGHRS 782
            LT KEESELFV +QEL RLEEVK RL SQF REPTLVEWAEAVGM+C  LQS LH G+ S
Sbjct: 270  LTPKEESELFVHVQELIRLEEVKQRLQSQFDREPTLVEWAEAVGMTCQSLQSILHSGNSS 329

Query: 781  RERMTCANFRLVVHVAKRYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFSTYAYWWI 602
            RE++  ANFRLVVHVAK YQG G+NLQDLLQ+GS GLM+S+EKFKPQAGCRF+TYAYWWI
Sbjct: 330  REKIIYANFRLVVHVAKHYQGQGLNLQDLLQEGSMGLMKSLEKFKPQAGCRFATYAYWWI 389

Query: 601  RQSIRKAIFQNSRTIRLPENVYNLLSQVKKAKKECIQEGQEPTKEELARRIGISVEKFTS 422
            RQ+IRKAIFQNSRTIRLPENVY+LLSQVKKAKK  IQEG  PT EELA+R+GI+VEK   
Sbjct: 390  RQAIRKAIFQNSRTIRLPENVYSLLSQVKKAKKLFIQEGHHPTNEELAKRVGITVEKLER 449

Query: 421  LLASTRMPLSMQQPVWADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLNILSPKER 242
            L  STRMPLS+QQPVWADQDTTFQEITAD+EVE PD CV+KQLMR+HVR+ ++IL PKER
Sbjct: 450  LFMSTRMPLSIQQPVWADQDTTFQEITADTEVEKPDLCVAKQLMRRHVRNLISILPPKER 509

Query: 241  RIIRLRFGIEDGKQNSLSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEAYSDLL 68
            RIIR+R+GIE+ +  SL +IGS+FG+SKERVRQLE+RAL KLK+C SSQGL AY+DLL
Sbjct: 510  RIIRMRYGIENNEPKSLQEIGSIFGLSKERVRQLESRALHKLKQCLSSQGLGAYADLL 567


>ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X4
            [Nelumbo nucifera]
          Length = 525

 Score =  591 bits (1524), Expect = e-166
 Identities = 322/522 (61%), Positives = 378/522 (72%), Gaps = 11/522 (2%)
 Frame = -2

Query: 1600 TISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQ-----RQTGNGAVFCEEKKSSESDE 1439
            T SITRHFPASVLLQEQRD+ R  L I ++DK SQ     R+  +     EEKKS + D 
Sbjct: 3    TTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLEDKVHLYEEKKSCQPDR 62

Query: 1438 YIKDFERQLLYWPDS--LNPPLYPGAKQLMSTIALSPYED--KQVDAEPXXXXXXXXXXX 1271
            Y + FERQLLYWP    L P LY G K L+S +  S      K VD  P           
Sbjct: 63   YWEGFERQLLYWPGLWYLLPSLYKGEKPLLSMVTQSTAAGTVKNVDVRPCDALELAKKAV 122

Query: 1270 XXXXXXXXXADESNMLGKDFGESFL-SVESTSTTLQIPHEKEIKVXXXXXXXXXXXXRGV 1094
                     A +  + G D  ESFL  +E  +   +IP  +E+ V            R +
Sbjct: 123  LASKQAASLAKDYELFGADSHESFLPDLEPRNLANKIPLREEVAVRSKRLLERQSKRRWI 182

Query: 1093 AKPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSGSGTRQLLTAKEESELFVQIQEL 914
             +PKVV+ EA   R  D+H+K++E FD NDPLRLFL G  T+QLLT KEESELFV +QEL
Sbjct: 183  PRPKVVVSEASTSRKSDIHKKIHEGFDTNDPLRLFLWGPETKQLLTPKEESELFVHVQEL 242

Query: 913  ARLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHLHLGHRSRERMTCANFRLVVHVA 734
             RLEEVK RL SQF REPTLVEWAEAVGM+C  LQS LH G+ SRE++  ANFRLVVHVA
Sbjct: 243  IRLEEVKQRLQSQFDREPTLVEWAEAVGMTCQSLQSILHSGNSSREKIIYANFRLVVHVA 302

Query: 733  KRYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIR 554
            K YQG G+NLQDLLQ+GS GLM+S+EKFKPQAGCRF+TYAYWWIRQ+IRKAIFQNSRTIR
Sbjct: 303  KHYQGQGLNLQDLLQEGSMGLMKSLEKFKPQAGCRFATYAYWWIRQAIRKAIFQNSRTIR 362

Query: 553  LPENVYNLLSQVKKAKKECIQEGQEPTKEELARRIGISVEKFTSLLASTRMPLSMQQPVW 374
            LPENVY+LLSQVKKAKK  IQEG  PT EELA+R+GI+VEK   L  STRMPLS+QQPVW
Sbjct: 363  LPENVYSLLSQVKKAKKLFIQEGHHPTNEELAKRVGITVEKLERLFMSTRMPLSIQQPVW 422

Query: 373  ADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLNILSPKERRIIRLRFGIEDGKQNS 194
            ADQDTTFQEITAD+EVE PD CV+KQLMR+HVR+ ++IL PKERRIIR+R+GIE+ +  S
Sbjct: 423  ADQDTTFQEITADTEVEKPDLCVAKQLMRRHVRNLISILPPKERRIIRMRYGIENNEPKS 482

Query: 193  LSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEAYSDLL 68
            L +IGS+FG+SKERVRQLE+RAL KLK+C SSQGL AY+DLL
Sbjct: 483  LQEIGSIFGLSKERVRQLESRALHKLKQCLSSQGLGAYADLL 524


>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X2 [Citrus sinensis]
          Length = 569

 Score =  536 bits (1382), Expect = e-149
 Identities = 299/541 (55%), Positives = 375/541 (69%), Gaps = 13/541 (2%)
 Frame = -2

Query: 1651 TSSVTMLYEQATPAVSS--TISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQ-----R 1496
            +SSV M  EQ+ PAV+S  T S+ RHFP SVLLQEQRDE R LLH+ K+DK SQ     R
Sbjct: 33   SSSVLMHNEQSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSR 92

Query: 1495 QTGNGAVFCEEKKSSESDEYIKDFERQLLYWPD--SLNPPLYPGAKQLMSTI--ALSPYE 1328
                 A F EEK S + D+ ++D E Q L+WPD  +L+PP+  G    +S    +LS   
Sbjct: 93   NMETEAFFVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDT 152

Query: 1327 DKQVDAEPXXXXXXXXXXXXXXXXXXXXADESNMLGKDFGESFLSVESTSTTLQIPHEKE 1148
            ++ VDAEP                    A+   + G +F +      S +++L  P E+ 
Sbjct: 153  EESVDAEPFDAVALARKALSASKEAASLAENPKLNGAEFTDI-----SLTSSLGYPLEEV 207

Query: 1147 IKVXXXXXXXXXXXXRGVAKPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSGSGTR 968
              V            R V+KPKV  HE    R   + +K++E FD NDPLRLFL G  TR
Sbjct: 208  KTVRSTQFLERRSKKRKVSKPKVTNHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETR 267

Query: 967  QLLTAKEESELFVQIQELARLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHLHLGH 788
            +LLTA EE EL  QIQ+L RLE+ KS+L SQFGREPTL+EWA+A+G+SC  L+S LH G+
Sbjct: 268  KLLTADEEFELIAQIQDLIRLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGN 327

Query: 787  RSRERMTCANFRLVVHVAKRYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFSTYAYW 608
             SRE++  AN RLVVHVAK+YQG G+ L DLLQ+GS GLM+S+EKFKPQAGCRF++YAYW
Sbjct: 328  SSREKLINANLRLVVHVAKQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYW 387

Query: 607  WIRQSIRKAIFQNSRTIRLPENVYNLLSQVKKAKKECIQEG-QEPTKEELARRIGISVEK 431
            W+RQ+IRKAIFQ+SRTIRLPEN+Y LLS+V +AK+  IQEG   P KE+LARR+GI+VEK
Sbjct: 388  WVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEK 447

Query: 430  FTSLLASTRMPLSMQQPVWADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLNILSP 251
               L+  TRMPLSMQQPVWADQDTTFQEITAD+ VE PD  V KQLMRQHVR+ L +L+P
Sbjct: 448  LERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNP 507

Query: 250  KERRIIRLRFGIEDGKQNSLSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEAYSDL 71
            KER I+RLRFGIEDGK  SLS++G++FG+SKERVRQLE+RAL +LK+    +    Y+DL
Sbjct: 508  KERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADL 567

Query: 70   L 68
            L
Sbjct: 568  L 568


>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X1 [Citrus sinensis]
          Length = 570

 Score =  535 bits (1379), Expect = e-149
 Identities = 298/541 (55%), Positives = 375/541 (69%), Gaps = 13/541 (2%)
 Frame = -2

Query: 1651 TSSVTMLYEQATPAVSS--TISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQ-----R 1496
            +S+V M  EQ+ PAV+S  T S+ RHFP SVLLQEQRDE R LLH+ K+DK SQ     R
Sbjct: 34   SSAVLMHNEQSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSR 93

Query: 1495 QTGNGAVFCEEKKSSESDEYIKDFERQLLYWPD--SLNPPLYPGAKQLMSTI--ALSPYE 1328
                 A F EEK S + D+ ++D E Q L+WPD  +L+PP+  G    +S    +LS   
Sbjct: 94   NMETEAFFVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDT 153

Query: 1327 DKQVDAEPXXXXXXXXXXXXXXXXXXXXADESNMLGKDFGESFLSVESTSTTLQIPHEKE 1148
            ++ VDAEP                    A+   + G +F +      S +++L  P E+ 
Sbjct: 154  EESVDAEPFDAVALARKALSASKEAASLAENPKLNGAEFTDI-----SLTSSLGYPLEEV 208

Query: 1147 IKVXXXXXXXXXXXXRGVAKPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSGSGTR 968
              V            R V+KPKV  HE    R   + +K++E FD NDPLRLFL G  TR
Sbjct: 209  KTVRSTQFLERRSKKRKVSKPKVTNHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETR 268

Query: 967  QLLTAKEESELFVQIQELARLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHLHLGH 788
            +LLTA EE EL  QIQ+L RLE+ KS+L SQFGREPTL+EWA+A+G+SC  L+S LH G+
Sbjct: 269  KLLTADEEFELIAQIQDLIRLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGN 328

Query: 787  RSRERMTCANFRLVVHVAKRYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFSTYAYW 608
             SRE++  AN RLVVHVAK+YQG G+ L DLLQ+GS GLM+S+EKFKPQAGCRF++YAYW
Sbjct: 329  SSREKLINANLRLVVHVAKQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYW 388

Query: 607  WIRQSIRKAIFQNSRTIRLPENVYNLLSQVKKAKKECIQEG-QEPTKEELARRIGISVEK 431
            W+RQ+IRKAIFQ+SRTIRLPEN+Y LLS+V +AK+  IQEG   P KE+LARR+GI+VEK
Sbjct: 389  WVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEK 448

Query: 430  FTSLLASTRMPLSMQQPVWADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLNILSP 251
               L+  TRMPLSMQQPVWADQDTTFQEITAD+ VE PD  V KQLMRQHVR+ L +L+P
Sbjct: 449  LERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNP 508

Query: 250  KERRIIRLRFGIEDGKQNSLSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEAYSDL 71
            KER I+RLRFGIEDGK  SLS++G++FG+SKERVRQLE+RAL +LK+    +    Y+DL
Sbjct: 509  KERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADL 568

Query: 70   L 68
            L
Sbjct: 569  L 569


>gb|KDO48072.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 569

 Score =  534 bits (1376), Expect = e-148
 Identities = 297/541 (54%), Positives = 376/541 (69%), Gaps = 13/541 (2%)
 Frame = -2

Query: 1651 TSSVTMLYEQATPAVSS--TISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQ-----R 1496
            +SSV M  EQ+ PAV+S  T S+ RHFP SVLLQEQRDE R LLH+ K+DK SQ     R
Sbjct: 33   SSSVLMHNEQSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSR 92

Query: 1495 QTGNGAVFCEEKKSSESDEYIKDFERQLLYWPD--SLNPPLYPGAKQLMSTI--ALSPYE 1328
                 A F EEK S + D+ ++D E Q L+WPD  +L+PP+  G    +S    +LS   
Sbjct: 93   NIETEAFFVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDT 152

Query: 1327 DKQVDAEPXXXXXXXXXXXXXXXXXXXXADESNMLGKDFGESFLSVESTSTTLQIPHEKE 1148
            ++ VDAEP                    A+   + G +F +      S +++L  P E+ 
Sbjct: 153  EESVDAEPFDAVALARKALSASKEAASLAENPKLNGAEFTDI-----SLTSSLGYPLEEV 207

Query: 1147 IKVXXXXXXXXXXXXRGVAKPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSGSGTR 968
             +             R V+KP+V  HE    R   + +K++E FD NDPLRLFL G  TR
Sbjct: 208  KQFSQPRFLERRSKKRKVSKPQVTNHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETR 267

Query: 967  QLLTAKEESELFVQIQELARLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHLHLGH 788
            +LLTA EE EL  QIQ+L RLE+ KS+L SQFGREPTL+EWA+A+G+SC  L+S LH G+
Sbjct: 268  KLLTADEEFELIAQIQDLIRLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGN 327

Query: 787  RSRERMTCANFRLVVHVAKRYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFSTYAYW 608
             SRE++  AN RLVVHVAK+YQG G++L DLLQ+GS GLM+S+EKFKPQAGCRF++YAYW
Sbjct: 328  SSREKLINANLRLVVHVAKQYQGRGISLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYW 387

Query: 607  WIRQSIRKAIFQNSRTIRLPENVYNLLSQVKKAKKECIQEG-QEPTKEELARRIGISVEK 431
            W+RQ+IRKAIFQ+SRTIRLPEN+Y LLS+V +AK+  IQEG   P KE+LARR+GI+VEK
Sbjct: 388  WVRQTIRKAIFQHSRTIRLPENIYTLLSKVLEAKRLYIQEGNHSPDKEDLARRVGITVEK 447

Query: 430  FTSLLASTRMPLSMQQPVWADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLNILSP 251
               L+  TRMPLSMQQPVWADQDTTFQEITAD+ VE PD  V KQLMRQHVR+ L +L+P
Sbjct: 448  LERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNP 507

Query: 250  KERRIIRLRFGIEDGKQNSLSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEAYSDL 71
            KER I+RLRFGIEDGK  SLS++G++FG+SKERVRQLE+RAL +LK+    +    Y+DL
Sbjct: 508  KERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADL 567

Query: 70   L 68
            L
Sbjct: 568  L 568


>ref|XP_011018731.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Populus euphratica]
          Length = 557

 Score =  534 bits (1375), Expect = e-148
 Identities = 305/541 (56%), Positives = 378/541 (69%), Gaps = 14/541 (2%)
 Frame = -2

Query: 1648 SSVTMLYEQATPAVSS--TISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQ-----RQ 1493
            SSV +L EQATPAV++  T S  +HFP SVLLQEQRDE R L +I K+D+ SQ     R+
Sbjct: 26   SSVLILREQATPAVTAIPTTSTAQHFPTSVLLQEQRDEFRPLQNIFKEDRPSQATLDRRK 85

Query: 1492 TGNGAVFCEEKKSSESDEYIKDFERQLLYWPDSLN--PPLYPGAKQLMS--TIALSPYED 1325
            T  G    E K S E D+ +++FE QL +WP   N  PP   G    MS  T +++   D
Sbjct: 86   TEIGTSGHEGKDSDELDQMVENFEYQLHHWPTYWNLLPPSQKGQNPSMSFTTQSVTRSTD 145

Query: 1324 KQVDAEPXXXXXXXXXXXXXXXXXXXXADESNMLGKDFGESFLSVESTSTTLQIPHEKEI 1145
            K +D EP                    AD S  L     ++  S  S+S +L+     E+
Sbjct: 146  KLIDVEPTDVINLAKRALSASKHAAFLADNSTDL-----DNLASTSSSSFSLE-----EV 195

Query: 1144 K-VXXXXXXXXXXXXRGVAKPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSGSGTR 968
            + V            R V K K +I E    +  D+ +++++ FDPNDPLRLFL G  T+
Sbjct: 196  RIVRSRRHLARQSLNRRVPKTKDMIFETYDSKSADVQKRLSQGFDPNDPLRLFLWGPETK 255

Query: 967  QLLTAKEESELFVQIQELARLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHLHLGH 788
            QLLTAKEE EL  QIQ+L  LE VK+RL SQFGREPTLVEWA+AVG+SC VL+  LH G+
Sbjct: 256  QLLTAKEEFELIAQIQDLMNLEGVKNRLESQFGREPTLVEWAQAVGLSCSVLKLQLHSGN 315

Query: 787  RSRERMTCANFRLVVHVAKRYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFSTYAYW 608
            RSRE++  AN R+VVH+AKRYQ  G+ LQDLLQ+G+ GLM+SIEKFKPQAGCRF+TYAYW
Sbjct: 316  RSREKLINANLRMVVHIAKRYQNRGLGLQDLLQEGTVGLMKSIEKFKPQAGCRFATYAYW 375

Query: 607  WIRQSIRKAIFQNSRTIRLPENVYNLLSQVKKAKKECIQEG-QEPTKEELARRIGISVEK 431
            WIRQ+I KAIFQ+SRTIRLPENVY LL +V +AK+  IQEG  +PT EE+ARR+GI+++K
Sbjct: 376  WIRQTITKAIFQHSRTIRLPENVYGLLGKVMEAKRSYIQEGNHQPTTEEIARRVGIAIDK 435

Query: 430  FTSLLASTRMPLSMQQPVWADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLNILSP 251
               LL  TR PLSMQQ VW+DQ+TTFQEITAD+E+E PD  V+KQLMR+H+R  LNILS 
Sbjct: 436  LEKLLCFTRTPLSMQQTVWSDQNTTFQEITADTEIEIPDVSVAKQLMRKHIRGLLNILSL 495

Query: 250  KERRIIRLRFGIEDGKQNSLSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEAYSDL 71
            KERRIIRLRFGIEDGKQ SLS+IG+VFG+SKERVRQLE+RAL KLK+C  S GL+AY+DL
Sbjct: 496  KERRIIRLRFGIEDGKQKSLSEIGNVFGLSKERVRQLESRALYKLKQCVGSHGLDAYADL 555

Query: 70   L 68
            L
Sbjct: 556  L 556


>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X3 [Citrus sinensis]
          Length = 561

 Score =  530 bits (1365), Expect = e-147
 Identities = 295/541 (54%), Positives = 372/541 (68%), Gaps = 13/541 (2%)
 Frame = -2

Query: 1651 TSSVTMLYEQATPAVSS--TISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQ-----R 1496
            +SS +     + PAV+S  T S+ RHFP SVLLQEQRDE R LLH+ K+DK SQ     R
Sbjct: 25   SSSASSSSSSSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSR 84

Query: 1495 QTGNGAVFCEEKKSSESDEYIKDFERQLLYWPD--SLNPPLYPGAKQLMSTI--ALSPYE 1328
                 A F EEK S + D+ ++D E Q L+WPD  +L+PP+  G    +S    +LS   
Sbjct: 85   NMETEAFFVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDT 144

Query: 1327 DKQVDAEPXXXXXXXXXXXXXXXXXXXXADESNMLGKDFGESFLSVESTSTTLQIPHEKE 1148
            ++ VDAEP                    A+   + G +F +      S +++L  P E+ 
Sbjct: 145  EESVDAEPFDAVALARKALSASKEAASLAENPKLNGAEFTDI-----SLTSSLGYPLEEV 199

Query: 1147 IKVXXXXXXXXXXXXRGVAKPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSGSGTR 968
              V            R V+KPKV  HE    R   + +K++E FD NDPLRLFL G  TR
Sbjct: 200  KTVRSTQFLERRSKKRKVSKPKVTNHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETR 259

Query: 967  QLLTAKEESELFVQIQELARLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHLHLGH 788
            +LLTA EE EL  QIQ+L RLE+ KS+L SQFGREPTL+EWA+A+G+SC  L+S LH G+
Sbjct: 260  KLLTADEEFELIAQIQDLIRLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGN 319

Query: 787  RSRERMTCANFRLVVHVAKRYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFSTYAYW 608
             SRE++  AN RLVVHVAK+YQG G+ L DLLQ+GS GLM+S+EKFKPQAGCRF++YAYW
Sbjct: 320  SSREKLINANLRLVVHVAKQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYW 379

Query: 607  WIRQSIRKAIFQNSRTIRLPENVYNLLSQVKKAKKECIQEG-QEPTKEELARRIGISVEK 431
            W+RQ+IRKAIFQ+SRTIRLPEN+Y LLS+V +AK+  IQEG   P KE+LARR+GI+VEK
Sbjct: 380  WVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEK 439

Query: 430  FTSLLASTRMPLSMQQPVWADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLNILSP 251
               L+  TRMPLSMQQPVWADQDTTFQEITAD+ VE PD  V KQLMRQHVR+ L +L+P
Sbjct: 440  LERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNP 499

Query: 250  KERRIIRLRFGIEDGKQNSLSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEAYSDL 71
            KER I+RLRFGIEDGK  SLS++G++FG+SKERVRQLE+RAL +LK+    +    Y+DL
Sbjct: 500  KERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADL 559

Query: 70   L 68
            L
Sbjct: 560  L 560


>gb|KDO48082.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 532

 Score =  530 bits (1364), Expect = e-147
 Identities = 293/533 (54%), Positives = 371/533 (69%), Gaps = 13/533 (2%)
 Frame = -2

Query: 1627 EQATPAVSS--TISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQ-----RQTGNGAVF 1472
            EQ+ PAV+S  T S+ RHFP SVLLQEQRDE R LLH+ K+DK SQ     R     A F
Sbjct: 4    EQSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAFF 63

Query: 1471 CEEKKSSESDEYIKDFERQLLYWPD--SLNPPLYPGAKQLMSTI--ALSPYEDKQVDAEP 1304
             EEK S + D+ ++D E Q L+WPD  +L+PP+  G    +S    +LS   ++ VDAEP
Sbjct: 64   VEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEP 123

Query: 1303 XXXXXXXXXXXXXXXXXXXXADESNMLGKDFGESFLSVESTSTTLQIPHEKEIKVXXXXX 1124
                                A+   + G +F +      S +++L  P E+  +      
Sbjct: 124  FDAVALARKALSASKEAASLAENPKLNGAEFTDI-----SLTSSLGYPLEEVKQFSQPRF 178

Query: 1123 XXXXXXXRGVAKPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSGSGTRQLLTAKEE 944
                   R V+KP+V  HE    R   + +K++E FD NDPLRLFL G  TR+LLTA EE
Sbjct: 179  LERRSKKRKVSKPQVTNHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEE 238

Query: 943  SELFVQIQELARLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHLHLGHRSRERMTC 764
             EL  QIQ+L RLE+ KS+L SQFGREPTL+EWA+A+G+SC  L+S LH G+ SRE++  
Sbjct: 239  FELIAQIQDLIRLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLIN 298

Query: 763  ANFRLVVHVAKRYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFSTYAYWWIRQSIRK 584
            AN RLVVHVAK+YQG G++L DLLQ+GS GLM+S+EKFKPQAGCRF++YAYWW+RQ+IRK
Sbjct: 299  ANLRLVVHVAKQYQGRGISLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRK 358

Query: 583  AIFQNSRTIRLPENVYNLLSQVKKAKKECIQEG-QEPTKEELARRIGISVEKFTSLLAST 407
            AIFQ+SRTIRLPEN+Y LLS+V +AK+  IQEG   P KE+LARR+GI+VEK   L+  T
Sbjct: 359  AIFQHSRTIRLPENIYTLLSKVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFIT 418

Query: 406  RMPLSMQQPVWADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLNILSPKERRIIRL 227
            RMPLSMQQPVWADQDTTFQEITAD+ VE PD  V KQLMRQHVR+ L +L+PKER I+RL
Sbjct: 419  RMPLSMQQPVWADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRL 478

Query: 226  RFGIEDGKQNSLSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEAYSDLL 68
            RFGIEDGK  SLS++G++FG+SKERVRQLE+RAL +LK+    +    Y+DLL
Sbjct: 479  RFGIEDGKPKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLL 531


>gb|AKC88770.1| sigma factor [Francoa sonchifolia]
          Length = 549

 Score =  528 bits (1360), Expect = e-147
 Identities = 298/535 (55%), Positives = 374/535 (69%), Gaps = 17/535 (3%)
 Frame = -2

Query: 1621 ATPAVSS--TISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQ-----RQTGNGAVFCE 1466
            + PA +S  T S+ R+FP SVLL+EQR+E R+L HI K+++ S+     RQ  NGAV  +
Sbjct: 21   SAPAATSMPTTSLARNFPTSVLLREQREEYRVLCHILKEERTSEATLDMRQMLNGAV--Q 78

Query: 1465 EKKSSESDEYIKDFERQLLYWPD--SLNPPLYPGAKQLMSTIALSPYE-----DKQVDAE 1307
            E+ S  SD+ ++DFER+LL WP    + P L  G     S++A+ P       +K    E
Sbjct: 79   EEISDNSDQLVQDFERRLLQWPGLWPIFPSLQTGGSP-SSSLAMQPVTPTTDGEKSAGTE 137

Query: 1306 PXXXXXXXXXXXXXXXXXXXXADESNMLGKDFGESFLSVESTSTTL-QIPHEKEIKVXXX 1130
                                  +ES  L +  G+   +      +L  +P +K +++   
Sbjct: 138  SCLAAALAMKSLSASKQAAPLLNESK-LARVNGDGLPAPSLDPASLVSVPLDK-VRIVRS 195

Query: 1129 XXXXXXXXXRGVAKPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSGSGTRQLLTAK 950
                     + V  PKV +HE    R  D+ RK +E FDPNDPLR+FL G  T+QLLTAK
Sbjct: 196  TRLLERRSKKRV--PKVGVHETFHSRRTDIKRKSSEGFDPNDPLRMFLWGPETKQLLTAK 253

Query: 949  EESELFVQIQELARLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHLHLGHRSRERM 770
            EE EL   IQ++ +LEEVKSRL SQFG EPTL+EWAEA G+SC VLQS L   ++SRE++
Sbjct: 254  EEFELIDHIQDMMKLEEVKSRLLSQFGHEPTLIEWAEAAGISCRVLQSQLRTANKSREKL 313

Query: 769  TCANFRLVVHVAKRYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFSTYAYWWIRQSI 590
              AN R+VVH+AK+Y G G++  DLLQ+GS GLM+S+EKFKPQAGCRF+TYAYWWIRQ++
Sbjct: 314  INANLRMVVHIAKQYLGKGLSFPDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTV 373

Query: 589  RKAIFQNSRTIRLPENVYNLLSQVKKAKKECIQEG-QEPTKEELARRIGISVEKFTSLLA 413
            RKAIFQ+SRTIRLPENVY LL +V +AKK CIQEG   PTKEELARR+GI+VEK   LL 
Sbjct: 374  RKAIFQHSRTIRLPENVYTLLGKVLEAKKSCIQEGNHRPTKEELARRVGITVEKLEKLLY 433

Query: 412  STRMPLSMQQPVWADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLNILSPKERRII 233
            +TRMPLSMQQPVWA QDTTFQEI AD+E+E PD  V KQ+MRQHVR+ L+ILSPKERRII
Sbjct: 434  TTRMPLSMQQPVWAGQDTTFQEIIADTEIEIPDISVGKQMMRQHVRNLLSILSPKERRII 493

Query: 232  RLRFGIEDGKQNSLSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEAYSDLL 68
            RLRFGIEDGKQ SLS+IG+VFG+SKERVRQLE+RAL +LK+C SSQGL AY+DLL
Sbjct: 494  RLRFGIEDGKQKSLSEIGAVFGLSKERVRQLESRALYRLKQCLSSQGLGAYTDLL 548


>gb|KDO48074.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 561

 Score =  528 bits (1359), Expect = e-147
 Identities = 293/541 (54%), Positives = 373/541 (68%), Gaps = 13/541 (2%)
 Frame = -2

Query: 1651 TSSVTMLYEQATPAVSS--TISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQ-----R 1496
            +SS +     + PAV+S  T S+ RHFP SVLLQEQRDE R LLH+ K+DK SQ     R
Sbjct: 25   SSSASSSSSSSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSR 84

Query: 1495 QTGNGAVFCEEKKSSESDEYIKDFERQLLYWPD--SLNPPLYPGAKQLMSTI--ALSPYE 1328
                 A F EEK S + D+ ++D E Q L+WPD  +L+PP+  G    +S    +LS   
Sbjct: 85   NIETEAFFVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDT 144

Query: 1327 DKQVDAEPXXXXXXXXXXXXXXXXXXXXADESNMLGKDFGESFLSVESTSTTLQIPHEKE 1148
            ++ VDAEP                    A+   + G +F +      S +++L  P E+ 
Sbjct: 145  EESVDAEPFDAVALARKALSASKEAASLAENPKLNGAEFTDI-----SLTSSLGYPLEEV 199

Query: 1147 IKVXXXXXXXXXXXXRGVAKPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSGSGTR 968
             +             R V+KP+V  HE    R   + +K++E FD NDPLRLFL G  TR
Sbjct: 200  KQFSQPRFLERRSKKRKVSKPQVTNHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETR 259

Query: 967  QLLTAKEESELFVQIQELARLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHLHLGH 788
            +LLTA EE EL  QIQ+L RLE+ KS+L SQFGREPTL+EWA+A+G+SC  L+S LH G+
Sbjct: 260  KLLTADEEFELIAQIQDLIRLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGN 319

Query: 787  RSRERMTCANFRLVVHVAKRYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFSTYAYW 608
             SRE++  AN RLVVHVAK+YQG G++L DLLQ+GS GLM+S+EKFKPQAGCRF++YAYW
Sbjct: 320  SSREKLINANLRLVVHVAKQYQGRGISLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYW 379

Query: 607  WIRQSIRKAIFQNSRTIRLPENVYNLLSQVKKAKKECIQEG-QEPTKEELARRIGISVEK 431
            W+RQ+IRKAIFQ+SRTIRLPEN+Y LLS+V +AK+  IQEG   P KE+LARR+GI+VEK
Sbjct: 380  WVRQTIRKAIFQHSRTIRLPENIYTLLSKVLEAKRLYIQEGNHSPDKEDLARRVGITVEK 439

Query: 430  FTSLLASTRMPLSMQQPVWADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLNILSP 251
               L+  TRMPLSMQQPVWADQDTTFQEITAD+ VE PD  V KQLMRQHVR+ L +L+P
Sbjct: 440  LERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNP 499

Query: 250  KERRIIRLRFGIEDGKQNSLSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEAYSDL 71
            KER I+RLRFGIEDGK  SLS++G++FG+SKERVRQLE+RAL +LK+    +    Y+DL
Sbjct: 500  KERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADL 559

Query: 70   L 68
            L
Sbjct: 560  L 560


>ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protein [Populus trichocarpa]
            gi|550336129|gb|ERP59223.1| RNA POLYMERASE SIGMA-70
            FACTOR family protein [Populus trichocarpa]
          Length = 535

 Score =  527 bits (1358), Expect = e-146
 Identities = 300/538 (55%), Positives = 369/538 (68%), Gaps = 10/538 (1%)
 Frame = -2

Query: 1651 TSSVTMLYEQATPAVSS--TISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQ-----R 1496
            TSSV +L EQATPAVSS  T S  +HFP SVLLQEQRDE R L +I K+D+ SQ     R
Sbjct: 25   TSSVLILREQATPAVSSIPTTSTAQHFPTSVLLQEQRDEFRPLQNIFKEDRASQATLDRR 84

Query: 1495 QTGNGAVFCEEKKSSESDEYIKDFERQLLYWPDSLNPPLYPGAKQLMSTIALSPYEDKQV 1316
            +T  G    E K S E D+ +++FE QL +WP   N                    DK +
Sbjct: 85   KTEIGTSGHEGKDSDELDQLVENFEYQLHHWPAYWN------------------LTDKLI 126

Query: 1315 DAEPXXXXXXXXXXXXXXXXXXXXADESNMLGKDFGESFLSVESTSTTLQIPHEKEIKVX 1136
            D EP                    AD +  L     ++  S  S+S +L+     E+K+ 
Sbjct: 127  DVEPTNVINLAKRALSASKHAAFLADNNTDL-----DNLASTSSSSFSLE-----EVKIV 176

Query: 1135 XXXXXXXXXXXRGVA-KPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSGSGTRQLL 959
                          A K K +I E    +  D+ +++++ FDPNDPLRLFL G  T+QLL
Sbjct: 177  RSRRHLARQSLNRRAPKTKDLIFETYDSKSADVQKRLSQGFDPNDPLRLFLWGPETKQLL 236

Query: 958  TAKEESELFVQIQELARLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHLHLGHRSR 779
            TAKEE EL  QIQ+L  LE VK+RL SQFGREPTLVEWA+AVG+SC VL+  LH G+RSR
Sbjct: 237  TAKEEFELIAQIQDLMNLEGVKNRLESQFGREPTLVEWAQAVGLSCHVLKLQLHSGNRSR 296

Query: 778  ERMTCANFRLVVHVAKRYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFSTYAYWWIR 599
            E++  AN R+VVH+AKRYQ  G+ LQDLLQ+G+ GLM+SIEKFKPQAGCRF+TYAYWWIR
Sbjct: 297  EKLINANLRMVVHIAKRYQNRGLGLQDLLQEGTVGLMKSIEKFKPQAGCRFATYAYWWIR 356

Query: 598  QSIRKAIFQNSRTIRLPENVYNLLSQVKKAKKECIQEG-QEPTKEELARRIGISVEKFTS 422
            Q+I KAIFQ+SRTIRLPENVY LL +V +AK+  IQEG  +PT EE+ARR+GI+++K   
Sbjct: 357  QTITKAIFQHSRTIRLPENVYGLLGKVMEAKRSYIQEGNHQPTAEEIARRVGIAIDKLEK 416

Query: 421  LLASTRMPLSMQQPVWADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLNILSPKER 242
            LL  TR PLSMQQ VW+DQ+TTFQEITAD+E+E PD  V+KQLMR+H+R  LNILS KER
Sbjct: 417  LLCFTRTPLSMQQTVWSDQNTTFQEITADTEIEIPDMSVAKQLMRKHIRGLLNILSLKER 476

Query: 241  RIIRLRFGIEDGKQNSLSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEAYSDLL 68
            RIIRLRFGIEDGKQ SLS+IG+VFG+SKERVRQLE+RAL KLK+C  S GL+AY+DLL
Sbjct: 477  RIIRLRFGIEDGKQKSLSEIGNVFGLSKERVRQLESRALYKLKQCVGSHGLDAYADLL 534


>ref|XP_010653602.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Vitis
            vinifera]
          Length = 567

 Score =  526 bits (1355), Expect = e-146
 Identities = 297/567 (52%), Positives = 375/567 (66%), Gaps = 15/567 (2%)
 Frame = -2

Query: 1723 SMEAGXXXXXXXXXXXXXXXXPIRTSSVTMLYEQATPAVSST-ISITRHFPASVLLQEQR 1547
            SMEAG                   +SSV ML++Q  PAV+S   +I R FP SVLLQEQR
Sbjct: 6    SMEAGTNILSSTPSFPPRTHFRNSSSSVLMLHDQVAPAVASIPTTIARKFPTSVLLQEQR 65

Query: 1546 DETRLLLH-IKDDKMSQ----RQTGNGAVFCEEKKSSESDEYIKDFERQLLY----W--- 1403
            DE R     +KD++  Q    ++     V  +E+ S + ++Y+ +FERQLL     W   
Sbjct: 66   DEYRPFPQALKDERTFQATLEKRQMEIVVSADEENSDDHNQYMVNFERQLLLQPGLWYSL 125

Query: 1402 PDSLNPPLYPGAKQLMSTIALSPYEDKQVDAEPXXXXXXXXXXXXXXXXXXXXADESNML 1223
            P S      P +  +M +I      +  +D +P                     + + +L
Sbjct: 126  PSSQTGEKSPFSSSIMKSITTDI--ENSMDVKPCDVLALAKKALSASKQAVSLYENAKLL 183

Query: 1222 GKDFGESFLSVESTSTTLQIP-HEKEIKVXXXXXXXXXXXXRGVAKPKVVIHEAPRLRMV 1046
            G D  +S        ++  +P  EK ++                  PKV +HE    R  
Sbjct: 184  GADLEDSPSPSLGAISSPNLPLEEKTVRSTRLLERRSKKRR----NPKVAVHENHGSRRA 239

Query: 1045 DMHRKMNENFDPNDPLRLFLSGSGTRQLLTAKEESELFVQIQELARLEEVKSRLHSQFGR 866
            ++ RK+NE +DP DPLRLFL G  TR+LLTAKEESEL VQIQEL RLEEVK RL S   R
Sbjct: 240  EVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEVKKRLQSHLKR 299

Query: 865  EPTLVEWAEAVGMSCLVLQSHLHLGHRSRERMTCANFRLVVHVAKRYQGWGMNLQDLLQD 686
            EPT+VEWAEAVG+SC VLQS LH G+RSR+++  AN R+VVH+AK+YQG G+NLQDLLQ+
Sbjct: 300  EPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGRGLNLQDLLQE 359

Query: 685  GSKGLMRSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRLPENVYNLLSQVKKAK 506
            GS GLM S+EKFKP AGCRF++YAYWWIRQ++RKAIFQ+SRTIRLPEN+Y+LL +VK+AK
Sbjct: 360  GSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMYSLLGKVKEAK 419

Query: 505  KECIQEG-QEPTKEELARRIGISVEKFTSLLASTRMPLSMQQPVWADQDTTFQEITADSE 329
            +  IQEG  +PTKEE+A R+GI++EK   LL  TRMPLSMQQPVWADQDTTFQE+TAD+ 
Sbjct: 420  RLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDTTFQEVTADTG 479

Query: 328  VESPDQCVSKQLMRQHVRSFLNILSPKERRIIRLRFGIEDGKQNSLSQIGSVFGISKERV 149
            +E PD  V+KQLMRQHVR+ L++L+PKERRIIRLRFGI DG   +LS+IG VFG SKERV
Sbjct: 480  IEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTLSEIGLVFGFSKERV 539

Query: 148  RQLEARALDKLKKCFSSQGLEAYSDLL 68
            RQLE RAL KLK+C SS GLE+Y+DLL
Sbjct: 540  RQLEQRALHKLKQCLSSHGLESYTDLL 566


>ref|XP_011018728.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
            [Populus euphratica] gi|743810385|ref|XP_011018729.1|
            PREDICTED: RNA polymerase sigma factor sigF,
            chloroplastic isoform X1 [Populus euphratica]
            gi|743810387|ref|XP_011018730.1| PREDICTED: RNA
            polymerase sigma factor sigF, chloroplastic isoform X1
            [Populus euphratica]
          Length = 570

 Score =  525 bits (1352), Expect = e-146
 Identities = 303/554 (54%), Positives = 375/554 (67%), Gaps = 27/554 (4%)
 Frame = -2

Query: 1648 SSVTMLYEQATPAVSS--TISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQRQTGN-- 1484
            SSV +L EQATPAV++  T S  +HFP SVLLQEQRDE R L +I K+D+ SQ       
Sbjct: 26   SSVLILREQATPAVTAIPTTSTAQHFPTSVLLQEQRDEFRPLQNIFKEDRPSQATLDRRK 85

Query: 1483 ----------------GAVFCEEKKSSESDEYIKDFERQLLYWPDSLN--PPLYPGAKQL 1358
                            G    E K S E D+ +++FE QL +WP   N  PP   G    
Sbjct: 86   TEIGTSGHEGKDSDEIGTSGHEGKDSDELDQMVENFEYQLHHWPTYWNLLPPSQKGQNPS 145

Query: 1357 MS--TIALSPYEDKQVDAEPXXXXXXXXXXXXXXXXXXXXADESNMLGKDFGESFLSVES 1184
            MS  T +++   DK +D EP                    AD S  L     ++  S  S
Sbjct: 146  MSFTTQSVTRSTDKLIDVEPTDVINLAKRALSASKHAAFLADNSTDL-----DNLASTSS 200

Query: 1183 TSTTLQIPHEKEIK-VXXXXXXXXXXXXRGVAKPKVVIHEAPRLRMVDMHRKMNENFDPN 1007
            +S +L+     E++ V            R V K K +I E    +  D+ +++++ FDPN
Sbjct: 201  SSFSLE-----EVRIVRSRRHLARQSLNRRVPKTKDMIFETYDSKSADVQKRLSQGFDPN 255

Query: 1006 DPLRLFLSGSGTRQLLTAKEESELFVQIQELARLEEVKSRLHSQFGREPTLVEWAEAVGM 827
            DPLRLFL G  T+QLLTAKEE EL  QIQ+L  LE VK+RL SQFGREPTLVEWA+AVG+
Sbjct: 256  DPLRLFLWGPETKQLLTAKEEFELIAQIQDLMNLEGVKNRLESQFGREPTLVEWAQAVGL 315

Query: 826  SCLVLQSHLHLGHRSRERMTCANFRLVVHVAKRYQGWGMNLQDLLQDGSKGLMRSIEKFK 647
            SC VL+  LH G+RSRE++  AN R+VVH+AKRYQ  G+ LQDLLQ+G+ GLM+SIEKFK
Sbjct: 316  SCSVLKLQLHSGNRSREKLINANLRMVVHIAKRYQNRGLGLQDLLQEGTVGLMKSIEKFK 375

Query: 646  PQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRLPENVYNLLSQVKKAKKECIQEG-QEPTK 470
            PQAGCRF+TYAYWWIRQ+I KAIFQ+SRTIRLPENVY LL +V +AK+  IQEG  +PT 
Sbjct: 376  PQAGCRFATYAYWWIRQTITKAIFQHSRTIRLPENVYGLLGKVMEAKRSYIQEGNHQPTT 435

Query: 469  EELARRIGISVEKFTSLLASTRMPLSMQQPVWADQDTTFQEITADSEVESPDQCVSKQLM 290
            EE+ARR+GI+++K   LL  TR PLSMQQ VW+DQ+TTFQEITAD+E+E PD  V+KQLM
Sbjct: 436  EEIARRVGIAIDKLEKLLCFTRTPLSMQQTVWSDQNTTFQEITADTEIEIPDVSVAKQLM 495

Query: 289  RQHVRSFLNILSPKERRIIRLRFGIEDGKQNSLSQIGSVFGISKERVRQLEARALDKLKK 110
            R+H+R  LNILS KERRIIRLRFGIEDGKQ SLS+IG+VFG+SKERVRQLE+RAL KLK+
Sbjct: 496  RKHIRGLLNILSLKERRIIRLRFGIEDGKQKSLSEIGNVFGLSKERVRQLESRALYKLKQ 555

Query: 109  CFSSQGLEAYSDLL 68
            C  S GL+AY+DLL
Sbjct: 556  CVGSHGLDAYADLL 569


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  525 bits (1352), Expect = e-146
 Identities = 292/543 (53%), Positives = 370/543 (68%), Gaps = 15/543 (2%)
 Frame = -2

Query: 1651 TSSVTMLYEQATPAVSST-ISITRHFPASVLLQEQRDETRLLLH-IKDDKMSQ----RQT 1490
            +SSV ML++Q  PAV+S   +I R FP SVLLQEQRDE R     +KD++  Q    ++ 
Sbjct: 24   SSSVLMLHDQVAPAVASIPTTIARKFPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQ 83

Query: 1489 GNGAVFCEEKKSSESDEYIKDFERQLLY----W---PDSLNPPLYPGAKQLMSTIALSPY 1331
                V  +E+ S + ++Y+ +FERQLL     W   P S      P +  +M +I     
Sbjct: 84   MEIVVSADEENSDDHNQYMVNFERQLLLQPGLWYSLPSSQTGEKSPFSSSIMKSITTDI- 142

Query: 1330 EDKQVDAEPXXXXXXXXXXXXXXXXXXXXADESNMLGKDFGESFLSVESTSTTLQIP-HE 1154
             +  +D +P                     + + +LG D  +S        ++  +P  E
Sbjct: 143  -ENSMDVKPCDVLALAKKALSASKQAVSLYENAKLLGADLEDSPSPSLGAISSPNLPLEE 201

Query: 1153 KEIKVXXXXXXXXXXXXRGVAKPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSGSG 974
            K ++                  PKV +HE    R  ++ RK+NE +DP DPLRLFL G  
Sbjct: 202  KTVRSTRLLERRSKKRR----NPKVAVHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPE 257

Query: 973  TRQLLTAKEESELFVQIQELARLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHLHL 794
            TR+LLTAKEESEL VQIQEL RLEEVK RL S   REPT+VEWAEAVG+SC VLQS LH 
Sbjct: 258  TRKLLTAKEESELIVQIQELMRLEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHS 317

Query: 793  GHRSRERMTCANFRLVVHVAKRYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFSTYA 614
            G+RSR+++  AN R+VVH+AK+YQG G+NLQDLLQ+GS GLM S+EKFKP AGCRF++YA
Sbjct: 318  GNRSRQKLIYANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYA 377

Query: 613  YWWIRQSIRKAIFQNSRTIRLPENVYNLLSQVKKAKKECIQEG-QEPTKEELARRIGISV 437
            YWWIRQ++RKAIFQ+SRTIRLPEN+Y+LL +VK+AK+  IQEG  +PTKEE+A R+GI++
Sbjct: 378  YWWIRQAVRKAIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITI 437

Query: 436  EKFTSLLASTRMPLSMQQPVWADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLNIL 257
            EK   LL  TRMPLSMQQPVWADQDTTFQE+TAD+ +E PD  V+KQLMRQHVR+ L++L
Sbjct: 438  EKLQRLLLHTRMPLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVL 497

Query: 256  SPKERRIIRLRFGIEDGKQNSLSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEAYS 77
            +PKERRIIRLRFGI DG   +LS+IG VFG SKERVRQLE RAL KLK+C SS GLE+Y+
Sbjct: 498  TPKERRIIRLRFGIGDGIPRTLSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESYT 557

Query: 76   DLL 68
            DLL
Sbjct: 558  DLL 560


>ref|XP_008243975.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Prunus
            mume]
          Length = 573

 Score =  523 bits (1348), Expect = e-145
 Identities = 299/545 (54%), Positives = 379/545 (69%), Gaps = 17/545 (3%)
 Frame = -2

Query: 1651 TSSVTMLYEQATPAVSST--ISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQR----- 1496
            ++SV ML+EQA PAV+S    S+ RHFP SVLLQEQRDE + LLH+ K+DK S+      
Sbjct: 30   STSVLMLHEQAVPAVTSVPITSVARHFPTSVLLQEQRDEFKPLLHVLKEDKTSEATLDRM 89

Query: 1495 QTGNGAVFCEEKKSSESDEYIKDFERQLLYWPDSLN--PPLYPGAKQL--MSTIALSPYE 1328
            Q   GA   E+    +    +   + QLL  PD L+    L  GAK    ++  +L+   
Sbjct: 90   QIETGASVHEDLDIDDFYPLVNGSKPQLLN-PDILDVFSSLQTGAKPSTPVTLESLTTAS 148

Query: 1327 DKQVDAEPXXXXXXXXXXXXXXXXXXXXADESNMLGKDFGESFLSVESTSTTLQ---IPH 1157
            +K +D EP                    A++S  +G DF ES LS+    T+L    +  
Sbjct: 149  NKHMDVEPCNVVALAKKALSASREAASLAEDSQSMGADFDES-LSLGLGYTSLDNWIVEE 207

Query: 1156 EKEIK-VXXXXXXXXXXXXRGVAKPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSG 980
            EK ++              R V K K++ HE+      D+ +K++E F+PNDPLRLFL G
Sbjct: 208  EKTVRSTRILERRRKRIKTRKVPKSKLIGHESNSFTSSDVPKKISEGFNPNDPLRLFLWG 267

Query: 979  SGTRQLLTAKEESELFVQIQELARLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHL 800
              TRQLLTAKEE+EL  ++Q+L +LEEVKSRL +QFGREPTL+EWAEAVG+SC +L+S L
Sbjct: 268  PETRQLLTAKEEAELIARVQDLFKLEEVKSRLQTQFGREPTLIEWAEAVGISCQILKSQL 327

Query: 799  HLGHRSRERMTCANFRLVVHVAKRYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFST 620
              G  SRE++  AN R+VVH+AK+YQG G+ LQDL+Q+GS GLM+S+EKFKPQAGCRF+T
Sbjct: 328  RSGTSSREKLIYANLRMVVHIAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFAT 387

Query: 619  YAYWWIRQSIRKAIFQNSRTIRLPENVYNLLSQVKKAKKECIQEG-QEPTKEELARRIGI 443
            YAYWWIRQ++RKAIFQ+SRTIRLPENVY+LL +V +AKK CIQEG   P KEELA R+GI
Sbjct: 388  YAYWWIRQTVRKAIFQHSRTIRLPENVYSLLGKVLEAKKSCIQEGNHNPNKEELAIRVGI 447

Query: 442  SVEKFTSLLASTRMPLSMQQPVWADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLN 263
            +VEK   LL +TRMPLSMQQPVWADQDTTFQE+TAD+ VE PD  V+KQLMRQHVR  L+
Sbjct: 448  TVEKLEKLLYATRMPLSMQQPVWADQDTTFQEVTADTGVEIPDVSVAKQLMRQHVRHLLS 507

Query: 262  ILSPKERRIIRLRFGIEDGKQNSLSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEA 83
            IL+ +ER+IIRLR+GIEDGKQ SLS+IG +FG+SKERVRQLE+RA  KL++   SQGL A
Sbjct: 508  ILNLRERQIIRLRYGIEDGKQRSLSEIGGMFGLSKERVRQLESRAFLKLRQSLGSQGLGA 567

Query: 82   YSDLL 68
            Y  LL
Sbjct: 568  YGPLL 572


>gb|KDO48075.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 558

 Score =  523 bits (1346), Expect = e-145
 Identities = 287/522 (54%), Positives = 363/522 (69%), Gaps = 11/522 (2%)
 Frame = -2

Query: 1600 TISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQ-----RQTGNGAVFCEEKKSSESDE 1439
            T S+ RHFP SVLLQEQRDE R LLH+ K+DK SQ     R     A F EEK S + D+
Sbjct: 41   TSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAFFVEEKNSGDLDQ 100

Query: 1438 YIKDFERQLLYWPD--SLNPPLYPGAKQLMSTI--ALSPYEDKQVDAEPXXXXXXXXXXX 1271
             ++D E Q L+WPD  +L+PP+  G    +S    +LS   ++ VDAEP           
Sbjct: 101  LVQDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKAL 160

Query: 1270 XXXXXXXXXADESNMLGKDFGESFLSVESTSTTLQIPHEKEIKVXXXXXXXXXXXXRGVA 1091
                     A+   + G +F +      S +++L  P E+  +             R V+
Sbjct: 161  SASKEAASLAENPKLNGAEFTDI-----SLTSSLGYPLEEVKQFSQPRFLERRSKKRKVS 215

Query: 1090 KPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSGSGTRQLLTAKEESELFVQIQELA 911
            KP+V  HE    R   + +K++E FD NDPLRLFL G  TR+LLTA EE EL  QIQ+L 
Sbjct: 216  KPQVTNHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLI 275

Query: 910  RLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHLHLGHRSRERMTCANFRLVVHVAK 731
            RLE+ KS+L SQFGREPTL+EWA+A+G+SC  L+S LH G+ SRE++  AN RLVVHVAK
Sbjct: 276  RLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAK 335

Query: 730  RYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRL 551
            +YQG G++L DLLQ+GS GLM+S+EKFKPQAGCRF++YAYWW+RQ+IRKAIFQ+SRTIRL
Sbjct: 336  QYQGRGISLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRL 395

Query: 550  PENVYNLLSQVKKAKKECIQEG-QEPTKEELARRIGISVEKFTSLLASTRMPLSMQQPVW 374
            PEN+Y LLS+V +AK+  IQEG   P KE+LARR+GI+VEK   L+  TRMPLSMQQPVW
Sbjct: 396  PENIYTLLSKVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVW 455

Query: 373  ADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLNILSPKERRIIRLRFGIEDGKQNS 194
            ADQDTTFQEITAD+ VE PD  V KQLMRQHVR+ L +L+PKER I+RLRFGIEDGK  S
Sbjct: 456  ADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKS 515

Query: 193  LSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEAYSDLL 68
            LS++G++FG+SKERVRQLE+RAL +LK+    +    Y+DLL
Sbjct: 516  LSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLL 557


>ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
            gi|557530788|gb|ESR41971.1| hypothetical protein
            CICLE_v10011376mg [Citrus clementina]
          Length = 569

 Score =  521 bits (1343), Expect = e-145
 Identities = 295/541 (54%), Positives = 369/541 (68%), Gaps = 13/541 (2%)
 Frame = -2

Query: 1651 TSSVTMLYEQATPAVSS--TISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQ-----R 1496
            +SSV M  EQ+ PAV+S  T S+ RHFP SVLLQEQRDE R LLH+ K+DK SQ     R
Sbjct: 33   SSSVLMHNEQSAPAVASVPTSSVARHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSR 92

Query: 1495 QTGNGAVFCEEKKSSESDEYIKDFERQLLYWPD--SLNPPLYPGAKQLMSTI--ALSPYE 1328
                 A F EEK S + D+ ++D E Q L+WPD  +L+PP+  G    +S    +LS   
Sbjct: 93   NMETEAFFVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDT 152

Query: 1327 DKQVDAEPXXXXXXXXXXXXXXXXXXXXADESNMLGKDFGESFLSVESTSTTLQIPHEKE 1148
            ++ VDAEP                    A+   + G +F +      S +++L  P E+ 
Sbjct: 153  EESVDAEPFDAVALARKALSASKEAASLAENPKLNGAEFTDI-----SLTSSLGYPLEEV 207

Query: 1147 IKVXXXXXXXXXXXXRGVAKPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSGSGTR 968
              V            R V+KPKV  HE    R   + +K++E FDPNDPLRLFL G  TR
Sbjct: 208  KTVRSTRFLERRSKKRKVSKPKVTNHETYNSRKASVKKKLSEGFDPNDPLRLFLWGPETR 267

Query: 967  QLLTAKEESELFVQIQELARLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHLHLGH 788
            +LLTA EE EL  QIQ+L RLE+ KS+L SQFGREPTL+       +SC  L+S LH G+
Sbjct: 268  KLLTADEEFELIAQIQDLIRLEKEKSKLQSQFGREPTLILKLLRFHLSCRDLKSELHSGN 327

Query: 787  RSRERMTCANFRLVVHVAKRYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFSTYAYW 608
             SRE++  AN RLVVHVAK+YQG G+ L DLLQ+GS GLM+S+EKFKPQAGCRF++YAYW
Sbjct: 328  SSREKLINANLRLVVHVAKQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYW 387

Query: 607  WIRQSIRKAIFQNSRTIRLPENVYNLLSQVKKAKKECIQEG-QEPTKEELARRIGISVEK 431
            W+RQ+IRKAIFQ+SRTIRLPEN+Y LLS+V +AK+  IQEG   P KE+LARR+GI+VEK
Sbjct: 388  WVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEK 447

Query: 430  FTSLLASTRMPLSMQQPVWADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLNILSP 251
               L+  TRMPLSMQQPVWADQDTTFQEITAD+ VE PD  V KQLMRQHVR+ L +L+P
Sbjct: 448  LERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNP 507

Query: 250  KERRIIRLRFGIEDGKQNSLSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEAYSDL 71
            KER I+RLRFGIEDGK  SLS++G++FG+SKERVRQLE+RAL +LK+    +    Y+DL
Sbjct: 508  KERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADL 567

Query: 70   L 68
            L
Sbjct: 568  L 568


>ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prunus persica]
            gi|462400636|gb|EMJ06193.1| hypothetical protein
            PRUPE_ppa003513mg [Prunus persica]
          Length = 568

 Score =  520 bits (1340), Expect = e-144
 Identities = 296/542 (54%), Positives = 375/542 (69%), Gaps = 14/542 (2%)
 Frame = -2

Query: 1651 TSSVTMLYEQATPAVSST--ISITRHFPASVLLQEQRDETRLLLHI-KDDKMSQR----- 1496
            ++SV ML+EQA PAV+S    S+ RHFP SVLLQEQRDE + LLH+ K+DK S+      
Sbjct: 30   STSVLMLHEQAVPAVTSVPITSVARHFPTSVLLQEQRDEFKPLLHVLKEDKTSEAALDRM 89

Query: 1495 QTGNGAVFCEEKKSSESDEYIKDFERQLLYWPDSLN--PPLYPGAKQL--MSTIALSPYE 1328
            Q   GA   E+    +    +   + QLL   D L+    L  GAK    ++  +L+   
Sbjct: 90   QIETGASVHEDLDIDDFYPLVNSSKPQLLNH-DILDVFSSLQTGAKPSTPLTLESLTTAS 148

Query: 1327 DKQVDAEPXXXXXXXXXXXXXXXXXXXXADESNMLGKDFGESFLSVESTSTTLQIPHEKE 1148
            +K +D EP                    A++S  +G DF +  L   S +  + +  EK 
Sbjct: 149  NKHMDVEPCNVVALAKKALSASREAASLAEDSQSMGADFDD--LGYTSLANWI-VEEEKT 205

Query: 1147 IK-VXXXXXXXXXXXXRGVAKPKVVIHEAPRLRMVDMHRKMNENFDPNDPLRLFLSGSGT 971
            ++              R V K KV+ HE+      D+ +K++E F+PNDPLRLFL G  T
Sbjct: 206  VRSTRILERRRKRIKTRKVPKSKVIGHESNSFTGSDVRKKISEGFNPNDPLRLFLWGPET 265

Query: 970  RQLLTAKEESELFVQIQELARLEEVKSRLHSQFGREPTLVEWAEAVGMSCLVLQSHLHLG 791
            RQLLTAKEE+EL  ++Q+L +LEEVKSRL +QFGREPTL+EWAEAVG+SC +L+S L  G
Sbjct: 266  RQLLTAKEEAELIARVQDLFKLEEVKSRLQTQFGREPTLIEWAEAVGISCQILKSQLRSG 325

Query: 790  HRSRERMTCANFRLVVHVAKRYQGWGMNLQDLLQDGSKGLMRSIEKFKPQAGCRFSTYAY 611
              SRE++  AN R+VVH+AK+YQG G+ LQDL+Q+GS GLM+S+EKFKPQAGCRF+TYAY
Sbjct: 326  TSSREKLIYANLRMVVHIAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAY 385

Query: 610  WWIRQSIRKAIFQNSRTIRLPENVYNLLSQVKKAKKECIQEG-QEPTKEELARRIGISVE 434
            WWIRQ++RKAIFQ+SRTIRLPENVY+LL +V +AKK CIQEG   P KEELARR+GI+VE
Sbjct: 386  WWIRQTVRKAIFQHSRTIRLPENVYSLLGKVLEAKKSCIQEGNHNPNKEELARRVGITVE 445

Query: 433  KFTSLLASTRMPLSMQQPVWADQDTTFQEITADSEVESPDQCVSKQLMRQHVRSFLNILS 254
            K   LL +TRMPLSMQQPVWADQDTTFQE+TAD+ VE PD  V+KQLMRQHVR  L+IL+
Sbjct: 446  KLEKLLYATRMPLSMQQPVWADQDTTFQEVTADTGVEIPDVSVAKQLMRQHVRHLLSILN 505

Query: 253  PKERRIIRLRFGIEDGKQNSLSQIGSVFGISKERVRQLEARALDKLKKCFSSQGLEAYSD 74
             +ER IIRLR+GIEDGKQ SLS+IG +FG+SKERVRQLE+RA  KL++   SQGL AY  
Sbjct: 506  LREREIIRLRYGIEDGKQRSLSEIGGMFGLSKERVRQLESRAFLKLRQSLGSQGLGAYGP 565

Query: 73   LL 68
            LL
Sbjct: 566  LL 567