BLASTX nr result
ID: Aconitum23_contig00009043
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00009043
(1122 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-... 531 e-148
ref|XP_010251516.1| PREDICTED: RNA polymerase sigma factor sigB-... 516 e-143
ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-... 516 e-143
ref|XP_011086680.1| PREDICTED: RNA polymerase sigma factor sigB ... 514 e-143
ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB ... 508 e-141
ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB ... 508 e-141
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB ... 508 e-141
ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB ... 507 e-141
ref|XP_010097670.1| RNA polymerase sigma factor rpoD [Morus nota... 505 e-140
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-... 504 e-140
ref|XP_009377636.1| PREDICTED: RNA polymerase sigma factor sigB ... 504 e-140
ref|XP_009377635.1| PREDICTED: RNA polymerase sigma factor sigB ... 504 e-140
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB ... 504 e-140
ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB ... 502 e-139
ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cac... 501 e-139
gb|AKC88655.1| sigma factor [Francoa sonchifolia] 501 e-139
emb|CDP07629.1| unnamed protein product [Coffea canephora] 501 e-139
ref|XP_008392514.1| PREDICTED: RNA polymerase sigma factor sigB ... 501 e-139
ref|XP_008392513.1| PREDICTED: RNA polymerase sigma factor sigB ... 501 e-139
ref|XP_008240611.1| PREDICTED: RNA polymerase sigma factor sigB ... 501 e-139
>ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
Length = 572
Score = 531 bits (1369), Expect = e-148
Identities = 272/376 (72%), Positives = 308/376 (81%), Gaps = 4/376 (1%)
Frame = -2
Query: 1118 PSEDIDDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXXX 939
P ED D +DPT++ELKLLQ+QL KSIAVRSGRQTER+ +RA+AA A
Sbjct: 187 PKEDSDYLDPTDEELKLLQMQLSKSIAVRSGRQTERRARRARAAEKVAANVVAVKSGSSS 246
Query: 938 XXXRPASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSGS 759
R A QD+DY+DPLRY EGIQ L+KLE LYEEL ER G
Sbjct: 247 RKKRSALQDVDYSDPLRYLRGTTSTSRLLTATEELEFSEGIQDLLKLEKLYEELAERYGG 306
Query: 758 EPTFTQWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQE 579
+PTF QWAAAAG+DQKTLRK LN+GI CKDKMIKSNIRLVISIAK+YQGAGMN QDLVQE
Sbjct: 307 QPTFAQWAAAAGIDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQE 366
Query: 578 GCRGLVKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAN 399
GCRGLV+G EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREA
Sbjct: 367 GCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAR 426
Query: 398 KQLYRKNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADPE 219
KQLY +NGR+P+++E+ EATGL+ KRL+AV+LTPKAPRSLDQKIG + N+KPS++ ADP+
Sbjct: 427 KQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEVIADPD 486
Query: 218 AETTEDVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRERV 51
AETTE++L+K+FMKQDLEKVL+ E QV+RWRFGLEDGRMKTLQEIGELMGVSRER+
Sbjct: 487 AETTEELLMKKFMKQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERI 546
Query: 50 RQIESCAFRKLKNKKR 3
RQIESCAFRKLKNKKR
Sbjct: 547 RQIESCAFRKLKNKKR 562
>ref|XP_010251516.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Nelumbo
nucifera]
Length = 479
Score = 516 bits (1328), Expect = e-143
Identities = 266/377 (70%), Positives = 305/377 (80%), Gaps = 4/377 (1%)
Frame = -2
Query: 1121 FPSEDIDDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXX 942
F ++D D +D +++E KLLQ+QL KSIAVRSGRQTER+ +RA+A A+
Sbjct: 93 FSNKDSDGLDSSDEEFKLLQMQLLKSIAVRSGRQTERQARRARAMEKASTNVLSVKSGHS 152
Query: 941 XXXXRPASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSG 762
R A QDIDY+DPLRY EGIQ L+KLE L+EEL ER G
Sbjct: 153 SRKRRAALQDIDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLHEELAERCG 212
Query: 761 SEPTFTQWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQ 582
+PTF QWAAAAG+DQKTLRK LN+GI CKDKMIKSNIRLVISIAK+YQGAGMN QDLVQ
Sbjct: 213 GQPTFAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQ 272
Query: 581 EGCRGLVKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREA 402
EGCRGLVKG EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREA
Sbjct: 273 EGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREA 332
Query: 401 NKQLYRKNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADP 222
KQLY +NGR+P+++E+ EATGL+ KRL+AV+LTPKAP SLDQKIG + ++KPS+I ADP
Sbjct: 333 KKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPISLDQKIGMNQDMKPSEIIADP 392
Query: 221 EAETTEDVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRER 54
+AET E++LIKQFMKQDLEKVL+ E QV+RWRFG+EDGRMKTLQEIGELMGVSRER
Sbjct: 393 DAETAEELLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGELMGVSRER 452
Query: 53 VRQIESCAFRKLKNKKR 3
+RQIESCAFRKLKNK+R
Sbjct: 453 IRQIESCAFRKLKNKRR 469
>ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Nelumbo
nucifera]
Length = 584
Score = 516 bits (1328), Expect = e-143
Identities = 266/377 (70%), Positives = 305/377 (80%), Gaps = 4/377 (1%)
Frame = -2
Query: 1121 FPSEDIDDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXX 942
F ++D D +D +++E KLLQ+QL KSIAVRSGRQTER+ +RA+A A+
Sbjct: 198 FSNKDSDGLDSSDEEFKLLQMQLLKSIAVRSGRQTERQARRARAMEKASTNVLSVKSGHS 257
Query: 941 XXXXRPASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSG 762
R A QDIDY+DPLRY EGIQ L+KLE L+EEL ER G
Sbjct: 258 SRKRRAALQDIDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLHEELAERCG 317
Query: 761 SEPTFTQWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQ 582
+PTF QWAAAAG+DQKTLRK LN+GI CKDKMIKSNIRLVISIAK+YQGAGMN QDLVQ
Sbjct: 318 GQPTFAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQ 377
Query: 581 EGCRGLVKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREA 402
EGCRGLVKG EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREA
Sbjct: 378 EGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREA 437
Query: 401 NKQLYRKNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADP 222
KQLY +NGR+P+++E+ EATGL+ KRL+AV+LTPKAP SLDQKIG + ++KPS+I ADP
Sbjct: 438 KKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPISLDQKIGMNQDMKPSEIIADP 497
Query: 221 EAETTEDVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRER 54
+AET E++LIKQFMKQDLEKVL+ E QV+RWRFG+EDGRMKTLQEIGELMGVSRER
Sbjct: 498 DAETAEELLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGELMGVSRER 557
Query: 53 VRQIESCAFRKLKNKKR 3
+RQIESCAFRKLKNK+R
Sbjct: 558 IRQIESCAFRKLKNKRR 574
>ref|XP_011086680.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Sesamum
indicum]
Length = 613
Score = 514 bits (1324), Expect = e-143
Identities = 265/371 (71%), Positives = 298/371 (80%), Gaps = 4/371 (1%)
Frame = -2
Query: 1103 DDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXXXXXXRP 924
DDV+P+ +EL+ L+ QL KSIAVRS RQTER+ +R +AA AA R
Sbjct: 233 DDVEPSAEELEFLEAQLSKSIAVRSKRQTERRARRTRAAEKAAANIVSVKSGSSSRKKRS 292
Query: 923 ASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSGSEPTFT 744
A QD+DY+DPLRY GIQVL+KLE L ELT+R G +PTF
Sbjct: 293 AVQDVDYSDPLRYLRGTTSSSRLLTASEEQVLSSGIQVLLKLERLQMELTQRYGGQPTFA 352
Query: 743 QWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQEGCRGL 564
QWAAAAG+DQKTLRK +N+GI CKDKMIKSNIRLVISIAK+YQGAGMN QDLVQEGCRGL
Sbjct: 353 QWAAAAGVDQKTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL 412
Query: 563 VKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREANKQLYR 384
V+G EKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA KQLY
Sbjct: 413 VRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYS 472
Query: 383 KNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADPEAETTE 204
+NGR+P+D+E+ EATGL+ KRLSAVMLTPKAPRSLDQKIG + ++KPSD+ ADPEAET E
Sbjct: 473 ENGRHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETAE 532
Query: 203 DVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIES 36
D+LIKQFMKQDL KVL+ E QVV WRFGLEDGRMKTLQEIGELMGVSRER+RQIES
Sbjct: 533 DLLIKQFMKQDLAKVLDSLNPREKQVVIWRFGLEDGRMKTLQEIGELMGVSRERIRQIES 592
Query: 35 CAFRKLKNKKR 3
CAFRKLKNKKR
Sbjct: 593 CAFRKLKNKKR 603
>ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Eucalyptus
grandis]
Length = 601
Score = 508 bits (1307), Expect = e-141
Identities = 264/377 (70%), Positives = 301/377 (79%), Gaps = 4/377 (1%)
Frame = -2
Query: 1121 FPSEDIDDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXX 942
+ ++ +D++PT +EL+LLQ+QL KSIAVRS RQTERK R +AA AA
Sbjct: 215 YSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIRERAAEKAAANVVSVKSGSL 274
Query: 941 XXXXRPASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSG 762
R A Q++DY+DPLRY EGIQ L+KLE L ELTER G
Sbjct: 275 SKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQDLLKLERLQVELTERCG 334
Query: 761 SEPTFTQWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQ 582
EP F QWAAAAG+DQKTLRK LN+G CKDKMIKSNIRLVISIAK+YQGAGMN QDLVQ
Sbjct: 335 GEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQ 394
Query: 581 EGCRGLVKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREA 402
EGCRGLV+G EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA
Sbjct: 395 EGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA 454
Query: 401 NKQLYRKNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADP 222
KQLY +NGR P+++E+ EATGL+ KRL+AV++TPKAPRSLDQKIG + N+KPS++ ADP
Sbjct: 455 RKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQKIGINQNLKPSEVIADP 514
Query: 221 EAETTEDVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRER 54
AET+EDVL+KQFM+QDLEKVL+ E QVVRWRFGLEDGRMKTLQEIGELMGVSRER
Sbjct: 515 NAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRER 574
Query: 53 VRQIESCAFRKLKNKKR 3
+RQIESCAFRKLKNKKR
Sbjct: 575 IRQIESCAFRKLKNKKR 591
>ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Eucalyptus
grandis] gi|629111779|gb|KCW76739.1| hypothetical protein
EUGRSUZ_D01094 [Eucalyptus grandis]
Length = 588
Score = 508 bits (1307), Expect = e-141
Identities = 264/377 (70%), Positives = 301/377 (79%), Gaps = 4/377 (1%)
Frame = -2
Query: 1121 FPSEDIDDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXX 942
+ ++ +D++PT +EL+LLQ+QL KSIAVRS RQTERK R +AA AA
Sbjct: 202 YSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIRERAAEKAAANVVSVKSGSL 261
Query: 941 XXXXRPASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSG 762
R A Q++DY+DPLRY EGIQ L+KLE L ELTER G
Sbjct: 262 SKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQDLLKLERLQVELTERCG 321
Query: 761 SEPTFTQWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQ 582
EP F QWAAAAG+DQKTLRK LN+G CKDKMIKSNIRLVISIAK+YQGAGMN QDLVQ
Sbjct: 322 GEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQ 381
Query: 581 EGCRGLVKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREA 402
EGCRGLV+G EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA
Sbjct: 382 EGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA 441
Query: 401 NKQLYRKNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADP 222
KQLY +NGR P+++E+ EATGL+ KRL+AV++TPKAPRSLDQKIG + N+KPS++ ADP
Sbjct: 442 RKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQKIGINQNLKPSEVIADP 501
Query: 221 EAETTEDVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRER 54
AET+EDVL+KQFM+QDLEKVL+ E QVVRWRFGLEDGRMKTLQEIGELMGVSRER
Sbjct: 502 NAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRER 561
Query: 53 VRQIESCAFRKLKNKKR 3
+RQIESCAFRKLKNKKR
Sbjct: 562 IRQIESCAFRKLKNKKR 578
>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB [Solanum lycopersicum]
Length = 613
Score = 508 bits (1307), Expect = e-141
Identities = 259/373 (69%), Positives = 297/373 (79%), Gaps = 4/373 (1%)
Frame = -2
Query: 1109 DIDDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXXXXXX 930
D DD++P+ +EL++LQ QL IAV+S RQTERK +RAKA AA
Sbjct: 231 DSDDLEPSHEELEILQSQLSNVIAVKSNRQTERKARRAKAVERAAANVVSVKSGSTSRKK 290
Query: 929 RPASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSGSEPT 750
R + QD+DY+DPLRY GIQ L+KLE L ELTER G +PT
Sbjct: 291 RASVQDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPT 350
Query: 749 FTQWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQEGCR 570
FTQWAAAAG+DQ TLRK LN+GI CKDKMIKSN+RLVISIAK+YQG GMN QDLVQEGCR
Sbjct: 351 FTQWAAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCR 410
Query: 569 GLVKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREANKQL 390
GLV+G EKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA KQL
Sbjct: 411 GLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL 470
Query: 389 YRKNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADPEAET 210
+NGR+PND E+ EATGL+ KRL+AVMLTPKAPRSLDQK+GF+ ++KPS++ ADP+AET
Sbjct: 471 LTENGRHPNDAEVAEATGLSMKRLAAVMLTPKAPRSLDQKVGFNESLKPSEVLADPDAET 530
Query: 209 TEDVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQI 42
+E++L KQFM+QDLEKVL+ E QVVRWRFGLEDGRMKTLQEIGELMGVSRER+RQI
Sbjct: 531 SEEILTKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQI 590
Query: 41 ESCAFRKLKNKKR 3
ESCAFRKLKNKKR
Sbjct: 591 ESCAFRKLKNKKR 603
>ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB [Jatropha curcas]
gi|802585247|ref|XP_012070323.1| PREDICTED: RNA
polymerase sigma factor sigB [Jatropha curcas]
gi|643732514|gb|KDP39610.1| hypothetical protein
JCGZ_02630 [Jatropha curcas]
Length = 577
Score = 507 bits (1306), Expect = e-141
Identities = 261/376 (69%), Positives = 302/376 (80%), Gaps = 4/376 (1%)
Frame = -2
Query: 1118 PSEDIDDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXXX 939
P+++ D ++PT +EL+LLQ QL + IAVRS RQTERK +R +AA AA
Sbjct: 192 PTKESDHLEPTHEELELLQKQLSEGIAVRSRRQTERKERRTRAAEKAAANVMSWKSGSTS 251
Query: 938 XXXRPASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSGS 759
R Q++DY+DPLRY EGIQ L+KLE L+EEL ER G
Sbjct: 252 KKKRGPLQEVDYSDPLRYLRGTTSTSKLLTATEELELSEGIQDLLKLERLHEELAERCGG 311
Query: 758 EPTFTQWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQE 579
+PTF QWAAAAG+DQKTLR LN+GI CKD+MIKSNIRLVISIAK+YQGAGMN QDLVQE
Sbjct: 312 QPTFQQWAAAAGVDQKTLRTRLNYGISCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQE 371
Query: 578 GCRGLVKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAN 399
GCRGLV+G EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA
Sbjct: 372 GCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAR 431
Query: 398 KQLYRKNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADPE 219
KQLY +NGRYP+D+E+ EATGL+ KRLSAV+LTPKAPRSLDQKIG ++++KPS+I ADP+
Sbjct: 432 KQLYSENGRYPDDEEVAEATGLSMKRLSAVLLTPKAPRSLDQKIGINMDLKPSEIIADPD 491
Query: 218 AETTEDVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRERV 51
AET ED+L+KQFMKQDLEKVL+ ENQV+RWRFGLEDGR+KTLQEIGE+MGVSRER+
Sbjct: 492 AETAEDLLMKQFMKQDLEKVLDSLSPRENQVIRWRFGLEDGRIKTLQEIGEIMGVSRERI 551
Query: 50 RQIESCAFRKLKNKKR 3
RQIES AFRKLK KKR
Sbjct: 552 RQIESSAFRKLKKKKR 567
>ref|XP_010097670.1| RNA polymerase sigma factor rpoD [Morus notabilis]
gi|587881690|gb|EXB70625.1| RNA polymerase sigma factor
rpoD [Morus notabilis]
Length = 574
Score = 505 bits (1301), Expect = e-140
Identities = 259/375 (69%), Positives = 300/375 (80%), Gaps = 4/375 (1%)
Frame = -2
Query: 1115 SEDIDDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXXXX 936
+++ +D+ PT +EL++LQ QL KSIAVRS RQ+ERK KR +AA AA
Sbjct: 189 AKESNDLQPTNEELRILQEQLSKSIAVRSRRQSERKAKRDRAAEKAAANVVAVKSGSNSR 248
Query: 935 XXRPASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSGSE 756
R + QD+D++DPLRY EGIQ L+KLE L EEL ER G
Sbjct: 249 KKRASVQDVDHSDPLRYLRSTTSTSRLLTATEEIELSEGIQDLLKLEKLQEELAERCGGP 308
Query: 755 PTFTQWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQEG 576
PTF QWAAAAG+DQKTLR+ +N+GI CKDKMIKSN+RLVISIAK+YQGAGMN QDLVQEG
Sbjct: 309 PTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNVRLVISIAKNYQGAGMNLQDLVQEG 368
Query: 575 CRGLVKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREANK 396
CRGLV+G EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA K
Sbjct: 369 CRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARK 428
Query: 395 QLYRKNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADPEA 216
QLY +NGR PND+E+ EATGL+ KRL+AV+LTPKAPRSL+QKIG + N+KPS+I ADP+A
Sbjct: 429 QLYSENGRQPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEIIADPDA 488
Query: 215 ETTEDVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRERVR 48
ET EDVL +QFMKQDL+KVL+ E QV+RWRFG++DGRMKTLQEIGELMGVSRER+R
Sbjct: 489 ETLEDVLTRQFMKQDLDKVLDSLNQREKQVIRWRFGMDDGRMKTLQEIGELMGVSRERIR 548
Query: 47 QIESCAFRKLKNKKR 3
QIESCAFRKLKNKKR
Sbjct: 549 QIESCAFRKLKNKKR 563
>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum tuberosum]
Length = 613
Score = 504 bits (1299), Expect = e-140
Identities = 259/373 (69%), Positives = 295/373 (79%), Gaps = 4/373 (1%)
Frame = -2
Query: 1109 DIDDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXXXXXX 930
D DD++P+ +EL++LQ QL IAV+S RQTERK KRAK+ AA
Sbjct: 231 DSDDLEPSPEELEILQSQLSNVIAVKSNRQTERKAKRAKSVEKAAANVVTVKSGSTSRKK 290
Query: 929 RPASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSGSEPT 750
R + QD+DY+DPLRY GIQ L+KLE L ELTER G +PT
Sbjct: 291 RASVQDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPT 350
Query: 749 FTQWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQEGCR 570
FTQWAAAAG+DQ TLRK LN+GI CKDKMIKSN+RLVISIAK+YQG GMN QDLVQEGCR
Sbjct: 351 FTQWAAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCR 410
Query: 569 GLVKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREANKQL 390
GLV+G EKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRV+EA KQL
Sbjct: 411 GLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQL 470
Query: 389 YRKNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADPEAET 210
+NGR+PND E+ EA GL+ KRL+AVMLTPKAPRSLDQKIGF+ ++KPS++ ADPEAET
Sbjct: 471 LTENGRHPNDAEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGFNESLKPSEVLADPEAET 530
Query: 209 TEDVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQI 42
+E++L KQFM+QDLEKVL+ E QVVRWRFGLEDGRMKTLQEIGELMGVSRER+RQI
Sbjct: 531 SEEILTKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQI 590
Query: 41 ESCAFRKLKNKKR 3
ESCAFRKLKNKKR
Sbjct: 591 ESCAFRKLKNKKR 603
>ref|XP_009377636.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Pyrus x
bretschneideri]
Length = 613
Score = 504 bits (1298), Expect = e-140
Identities = 259/374 (69%), Positives = 299/374 (79%), Gaps = 4/374 (1%)
Frame = -2
Query: 1112 EDIDDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXXXXX 933
+++++V+ T +E +LLQ QL K I +S RQTERK +RAKAA AA
Sbjct: 230 KELEEVEQTYEEFELLQEQLSKGITAKSSRQTERKARRAKAAEKAAASVVSVKSGSATRK 289
Query: 932 XRPASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSGSEP 753
R + Q+ID++DPLRY EGIQ L+KLE L+EEL +R G +P
Sbjct: 290 KRSSVQEIDHSDPLRYLRSTTHTSRLLTANEEIEFSEGIQELLKLEKLHEELAQRCGGQP 349
Query: 752 TFTQWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQEGC 573
T QWAAAAG+DQKTLRK +N+GI CKDKMIKSNIRLVISIAK+YQGAGMN QDLVQEGC
Sbjct: 350 TIAQWAAAAGVDQKTLRKRVNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGC 409
Query: 572 RGLVKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREANKQ 393
RGLV+G EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREA KQ
Sbjct: 410 RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQ 469
Query: 392 LYRKNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADPEAE 213
LY NGR+PND+E+ EATGL+ KRLSAV+LTPKAPRSL+QKIG + N+KPS++ +DP+AE
Sbjct: 470 LYSLNGRHPNDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVISDPDAE 529
Query: 212 TTEDVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQ 45
T ED+L+K+FMKQDLEKVL+ E QVVRWRFGLEDGRMKTLQEIGELMGVSRER+RQ
Sbjct: 530 TAEDLLMKKFMKQDLEKVLDSLNTREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQ 589
Query: 44 IESCAFRKLKNKKR 3
IESCAFRKLKNKKR
Sbjct: 590 IESCAFRKLKNKKR 603
>ref|XP_009377635.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Pyrus x
bretschneideri]
Length = 643
Score = 504 bits (1298), Expect = e-140
Identities = 259/374 (69%), Positives = 299/374 (79%), Gaps = 4/374 (1%)
Frame = -2
Query: 1112 EDIDDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXXXXX 933
+++++V+ T +E +LLQ QL K I +S RQTERK +RAKAA AA
Sbjct: 260 KELEEVEQTYEEFELLQEQLSKGITAKSSRQTERKARRAKAAEKAAASVVSVKSGSATRK 319
Query: 932 XRPASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSGSEP 753
R + Q+ID++DPLRY EGIQ L+KLE L+EEL +R G +P
Sbjct: 320 KRSSVQEIDHSDPLRYLRSTTHTSRLLTANEEIEFSEGIQELLKLEKLHEELAQRCGGQP 379
Query: 752 TFTQWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQEGC 573
T QWAAAAG+DQKTLRK +N+GI CKDKMIKSNIRLVISIAK+YQGAGMN QDLVQEGC
Sbjct: 380 TIAQWAAAAGVDQKTLRKRVNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGC 439
Query: 572 RGLVKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREANKQ 393
RGLV+G EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREA KQ
Sbjct: 440 RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQ 499
Query: 392 LYRKNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADPEAE 213
LY NGR+PND+E+ EATGL+ KRLSAV+LTPKAPRSL+QKIG + N+KPS++ +DP+AE
Sbjct: 500 LYSLNGRHPNDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVISDPDAE 559
Query: 212 TTEDVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQ 45
T ED+L+K+FMKQDLEKVL+ E QVVRWRFGLEDGRMKTLQEIGELMGVSRER+RQ
Sbjct: 560 TAEDLLMKKFMKQDLEKVLDSLNTREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQ 619
Query: 44 IESCAFRKLKNKKR 3
IESCAFRKLKNKKR
Sbjct: 620 IESCAFRKLKNKKR 633
>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB [Fragaria vesca subsp.
vesca]
Length = 616
Score = 504 bits (1298), Expect = e-140
Identities = 257/371 (69%), Positives = 296/371 (79%), Gaps = 4/371 (1%)
Frame = -2
Query: 1103 DDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXXXXXXRP 924
++V+P +E +LLQ QL IA RS RQTERK +R +AA AA R
Sbjct: 236 ENVEPANEEFELLQEQLSNGIAARSSRQTERKARRTRAAEKAAASIVSVKSGSTSRKKRA 295
Query: 923 ASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSGSEPTFT 744
+ QD+D++DPLRY EGIQ L+KLE L E+L +R G++PTF
Sbjct: 296 SLQDVDHSDPLRYLRATTHTSRLLTANEEIELSEGIQELLKLEKLQEDLAQRCGTQPTFA 355
Query: 743 QWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQEGCRGL 564
QWAAAAG+DQKTLRK +N+GI CKDKMIKSNIRLVISIAK+YQGAGMN QDLVQEGCRGL
Sbjct: 356 QWAAAAGVDQKTLRKRVNYGIMCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL 415
Query: 563 VKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREANKQLYR 384
V+G EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREA KQLY
Sbjct: 416 VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYS 475
Query: 383 KNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADPEAETTE 204
NGR+PND+E+ EATGL+ KRL+AV+LTPKAPRSL+QKIG + N+KPSD+ ADP+AET E
Sbjct: 476 VNGRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSDVIADPDAETAE 535
Query: 203 DVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIES 36
D+L+K+FMKQDLEKVL+ E QV+RWRFG+EDGRMKTLQEIGELMGVSRER+RQIES
Sbjct: 536 DLLMKKFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIES 595
Query: 35 CAFRKLKNKKR 3
CAFRKLKNKKR
Sbjct: 596 CAFRKLKNKKR 606
>ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
gi|296090195|emb|CBI40014.3| unnamed protein product
[Vitis vinifera]
Length = 575
Score = 502 bits (1293), Expect = e-139
Identities = 256/375 (68%), Positives = 300/375 (80%), Gaps = 4/375 (1%)
Frame = -2
Query: 1115 SEDIDDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXXXX 936
+ED DD++PT +EL+LL+ + KSI VRS RQ ERK +RA+AA A+
Sbjct: 191 TEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSR 250
Query: 935 XXRPASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSGSE 756
R + Q++DY+DPLRY EGIQ L+KLE L E+L ER G +
Sbjct: 251 RKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVK 310
Query: 755 PTFTQWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQEG 576
PTF QWAAAAG+DQKTLR+ N+GI CKDKMIKSNIRLVISIAK+YQGAGMN QDLVQEG
Sbjct: 311 PTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEG 370
Query: 575 CRGLVKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREANK 396
CRGLV+G EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA K
Sbjct: 371 CRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARK 430
Query: 395 QLYRKNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADPEA 216
QLY +NGR+PN++E+ EATGL+ KRL+AV+LTPKAPRSLDQKIG + N+KPS++ ADP+A
Sbjct: 431 QLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDA 490
Query: 215 ETTEDVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRERVR 48
ET E++LIKQFM++DLEKVLN E QV+RWR+GLEDGR KTLQEIGELMGVSRER+R
Sbjct: 491 ETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIR 550
Query: 47 QIESCAFRKLKNKKR 3
QIESCAFRKLKNK+R
Sbjct: 551 QIESCAFRKLKNKRR 565
>ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
gi|508718473|gb|EOY10370.1| RNApolymerase sigma subunit 2
[Theobroma cacao]
Length = 623
Score = 501 bits (1291), Expect = e-139
Identities = 261/379 (68%), Positives = 299/379 (78%), Gaps = 12/379 (3%)
Frame = -2
Query: 1103 DDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXXXXXXRP 924
D+++PT +EL+ L+ QL +SIAVRS RQTERK KR +AA AA R
Sbjct: 232 DELEPTNEELEHLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRG 291
Query: 923 ASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSGSEPTFT 744
A QD+DY+DPLRY EGIQ L+KLE L EEL ER G +PTF
Sbjct: 292 ALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFA 351
Query: 743 QWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQEGCRGL 564
QWAAAAG+DQKTLR LN+G+ CKDKMIKSNIRLVISIAK+YQGAGMN QDLVQEGCRGL
Sbjct: 352 QWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL 411
Query: 563 VKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREANKQLYR 384
V+G EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA KQLY
Sbjct: 412 VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYS 471
Query: 383 KNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPS--------DITA 228
+NGR+P+++E+ EATGL+ KRL+AV+LTPKAPRSLDQKIG + N+KPS ++ A
Sbjct: 472 ENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSVCPVSSLAEVIA 531
Query: 227 DPEAETTEDVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSR 60
DPEAET ED+LIKQFM++DLEKVL+ E QV+RWRFG+EDGRMKTLQEIGELMGVSR
Sbjct: 532 DPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGELMGVSR 591
Query: 59 ERVRQIESCAFRKLKNKKR 3
ER+RQIESCAFRKLKNKKR
Sbjct: 592 ERIRQIESCAFRKLKNKKR 610
>gb|AKC88655.1| sigma factor [Francoa sonchifolia]
Length = 562
Score = 501 bits (1290), Expect = e-139
Identities = 259/371 (69%), Positives = 296/371 (79%), Gaps = 4/371 (1%)
Frame = -2
Query: 1103 DDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXXXXXXRP 924
D ++ T ++L+LLQ QL K+IAVRS RQ ERK +R +AA AA R
Sbjct: 182 DVLEQTHEKLELLQEQLSKTIAVRSRRQIERKARRGRAAEKAAANVVSVKSGSTNRKKRG 241
Query: 923 ASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSGSEPTFT 744
+ QD+DY+DPLRY GIQ L+KLE L EEL ER G +PTF
Sbjct: 242 SIQDVDYSDPLRYLRGTTSTSRLLTSTEEHELSAGIQDLLKLERLEEELVERCGCQPTFA 301
Query: 743 QWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQEGCRGL 564
QWAAAA +D KTLR+ LN+GI CKDKMIKSNIRLVISIAK+YQGAGMN QDLVQEGCRGL
Sbjct: 302 QWAAAARVDNKTLRRRLNYGIVCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL 361
Query: 563 VKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREANKQLYR 384
V+G EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA KQLY
Sbjct: 362 VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYS 421
Query: 383 KNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADPEAETTE 204
+NGR+PN++E+ +ATGL+ KRL+AV+LTPKAPRSLDQKIG + N+KPS+I ADPEAETTE
Sbjct: 422 ENGRHPNNEEVAKATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEIIADPEAETTE 481
Query: 203 DVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIES 36
D+L+KQFMK+DL+KVLN E QVVRWRFGLEDGRMKTLQEIGELMGVSRER+RQIES
Sbjct: 482 DILMKQFMKEDLDKVLNSLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIES 541
Query: 35 CAFRKLKNKKR 3
CAFRKLKNK+R
Sbjct: 542 CAFRKLKNKRR 552
>emb|CDP07629.1| unnamed protein product [Coffea canephora]
Length = 615
Score = 501 bits (1290), Expect = e-139
Identities = 258/378 (68%), Positives = 301/378 (79%), Gaps = 5/378 (1%)
Frame = -2
Query: 1121 FPSEDIDDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXX 942
+P + DD++PT +EL+LLQ QL ++AVRS RQ ERK +RA+AA AA
Sbjct: 228 YPFTESDDMEPTNEELELLQEQLLNNVAVRSKRQKERKARRARAAERAAASAVSVKSSGS 287
Query: 941 XXXXRPAS-QDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERS 765
+ +S Q+IDY+DPLRY EGIQ L+KLE L+EEL +R
Sbjct: 288 TSRKKRSSIQEIDYSDPLRYLRGTATTSRLLTASEEQELSEGIQDLLKLETLHEELAQRC 347
Query: 764 GSEPTFTQWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLV 585
G+EPTF QWAAAAG+DQKTLRK LN+G KDKMI SNIRLVISIA++YQGAGMN QDLV
Sbjct: 348 GAEPTFAQWAAAAGVDQKTLRKRLNYGTLSKDKMIMSNIRLVISIARNYQGAGMNLQDLV 407
Query: 584 QEGCRGLVKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVRE 405
QEGCRGLV+G EKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+E
Sbjct: 408 QEGCRGLVRGAEKFDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKE 467
Query: 404 ANKQLYRKNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITAD 225
A KQLY +NGR+P+D+E+ EA GL+ KRLSAVMLTPKAP+SLDQKIG + N+KPS++ AD
Sbjct: 468 AKKQLYSENGRHPDDEEVAEAAGLSMKRLSAVMLTPKAPKSLDQKIGINQNLKPSEVIAD 527
Query: 224 PEAETTEDVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRE 57
PEAET+ED+L+K+FM+QDLEKVLN E QV+RWRFGL DGRMKTLQEIGELMGVSRE
Sbjct: 528 PEAETSEDLLVKRFMRQDLEKVLNTLNPRERQVIRWRFGLGDGRMKTLQEIGELMGVSRE 587
Query: 56 RVRQIESCAFRKLKNKKR 3
R+RQIESCAFRKLKNK+R
Sbjct: 588 RIRQIESCAFRKLKNKRR 605
>ref|XP_008392514.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Malus
domestica]
Length = 610
Score = 501 bits (1289), Expect = e-139
Identities = 257/377 (68%), Positives = 297/377 (78%), Gaps = 4/377 (1%)
Frame = -2
Query: 1121 FPSEDIDDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXX 942
+ ++ ++V+ T +E +LLQ QL K I +S RQTERK +R+KAA AA
Sbjct: 224 YAEKESEEVERTNEEFELLQEQLSKGITAKSSRQTERKARRSKAAEKAAASVVSVKSGST 283
Query: 941 XXXXRPASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSG 762
R + Q+ID++DPLRY GIQ L+KLE L EELT+R G
Sbjct: 284 TRKKRSSVQEIDHSDPLRYLRSTTHTSRLLTANEEIELSAGIQELLKLEKLQEELTQRCG 343
Query: 761 SEPTFTQWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQ 582
+PT QWAAAAG+DQKTLRK +N GI CKDKMIKSNIRLVISIAK+YQG+GMN QDLVQ
Sbjct: 344 RQPTIAQWAAAAGVDQKTLRKRVNCGILCKDKMIKSNIRLVISIAKNYQGSGMNLQDLVQ 403
Query: 581 EGCRGLVKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREA 402
+GCRGLV+G EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA
Sbjct: 404 QGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA 463
Query: 401 NKQLYRKNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADP 222
KQLY NGR+PND+E+ EATGL+ KRLSAV+LTPKAPRSLDQKIG +LN KPS++ +DP
Sbjct: 464 KKQLYSLNGRHPNDEEVAEATGLSMKRLSAVLLTPKAPRSLDQKIGINLNFKPSEVISDP 523
Query: 221 EAETTEDVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRER 54
+AET ED+L+K+FMKQDLEKVL+ E QVVRWRFGLEDGRMKTLQEIGELMGVSRER
Sbjct: 524 DAETAEDLLMKKFMKQDLEKVLDSLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRER 583
Query: 53 VRQIESCAFRKLKNKKR 3
+RQIESCAFRKLKNKKR
Sbjct: 584 IRQIESCAFRKLKNKKR 600
>ref|XP_008392513.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Malus
domestica]
Length = 638
Score = 501 bits (1289), Expect = e-139
Identities = 257/377 (68%), Positives = 297/377 (78%), Gaps = 4/377 (1%)
Frame = -2
Query: 1121 FPSEDIDDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXX 942
+ ++ ++V+ T +E +LLQ QL K I +S RQTERK +R+KAA AA
Sbjct: 252 YAEKESEEVERTNEEFELLQEQLSKGITAKSSRQTERKARRSKAAEKAAASVVSVKSGST 311
Query: 941 XXXXRPASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSG 762
R + Q+ID++DPLRY GIQ L+KLE L EELT+R G
Sbjct: 312 TRKKRSSVQEIDHSDPLRYLRSTTHTSRLLTANEEIELSAGIQELLKLEKLQEELTQRCG 371
Query: 761 SEPTFTQWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQ 582
+PT QWAAAAG+DQKTLRK +N GI CKDKMIKSNIRLVISIAK+YQG+GMN QDLVQ
Sbjct: 372 RQPTIAQWAAAAGVDQKTLRKRVNCGILCKDKMIKSNIRLVISIAKNYQGSGMNLQDLVQ 431
Query: 581 EGCRGLVKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREA 402
+GCRGLV+G EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA
Sbjct: 432 QGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA 491
Query: 401 NKQLYRKNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADP 222
KQLY NGR+PND+E+ EATGL+ KRLSAV+LTPKAPRSLDQKIG +LN KPS++ +DP
Sbjct: 492 KKQLYSLNGRHPNDEEVAEATGLSMKRLSAVLLTPKAPRSLDQKIGINLNFKPSEVISDP 551
Query: 221 EAETTEDVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRER 54
+AET ED+L+K+FMKQDLEKVL+ E QVVRWRFGLEDGRMKTLQEIGELMGVSRER
Sbjct: 552 DAETAEDLLMKKFMKQDLEKVLDSLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRER 611
Query: 53 VRQIESCAFRKLKNKKR 3
+RQIESCAFRKLKNKKR
Sbjct: 612 IRQIESCAFRKLKNKKR 628
>ref|XP_008240611.1| PREDICTED: RNA polymerase sigma factor sigB [Prunus mume]
Length = 643
Score = 501 bits (1289), Expect = e-139
Identities = 258/374 (68%), Positives = 295/374 (78%), Gaps = 4/374 (1%)
Frame = -2
Query: 1112 EDIDDVDPTEDELKLLQLQLCKSIAVRSGRQTERKIKRAKAAGNAAXXXXXXXXXXXXXX 933
++ +DV+ T E +LLQ QL + I RS RQ ERK +RAKAA AA
Sbjct: 260 KESEDVESTNQEFELLQEQLSEGITARSSRQIERKARRAKAAEKAAASVVSVKSGSTSRK 319
Query: 932 XRPASQDIDYADPLRYXXXXXXXXXXXXXXXXXXXXEGIQVLMKLENLYEELTERSGSEP 753
R + QD+D++DPLRY EGIQ L+KLE L EEL +R G +P
Sbjct: 320 KRASLQDVDHSDPLRYLRATTHTSRLLTANEEIELSEGIQELLKLEKLQEELVQRCGGQP 379
Query: 752 TFTQWAAAAGLDQKTLRKSLNHGIWCKDKMIKSNIRLVISIAKHYQGAGMNFQDLVQEGC 573
T QWAAAAG+DQKTLRK +N+GI CKDKMIKSNIRLVISIAK+YQGAGMN QDLVQ+GC
Sbjct: 380 TIAQWAAAAGVDQKTLRKRINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQQGC 439
Query: 572 RGLVKGTEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREANKQ 393
RGLV+G EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREA KQ
Sbjct: 440 RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQ 499
Query: 392 LYRKNGRYPNDKEILEATGLTEKRLSAVMLTPKAPRSLDQKIGFDLNIKPSDITADPEAE 213
LY NGR+PND+E+ EATGL+ KRL+AV+LTPKAPRSL+QKIG + N+KPS++ ADP+AE
Sbjct: 500 LYSVNGRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEVIADPDAE 559
Query: 212 TTEDVLIKQFMKQDLEKVLN----XENQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQ 45
T ED+L+K+FMKQDLEKVL+ E QVVRWRFGLEDGRMKTLQEIGELMGVSRER+RQ
Sbjct: 560 TAEDMLMKKFMKQDLEKVLDSLNAREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQ 619
Query: 44 IESCAFRKLKNKKR 3
IESCAFRKLKNKKR
Sbjct: 620 IESCAFRKLKNKKR 633