BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00008377
         (2362 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [N...  1039   0.0  
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...  1035   0.0  
ref|XP_010107450.1| RNA-dependent RNA polymerase 2 [Morus notabi...  1034   0.0  
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1027   0.0  
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici...  1026   0.0  
gb|KDO69723.1| hypothetical protein CISIN_1g001183mg [Citrus sin...  1026   0.0  
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu...  1017   0.0  
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun...  1013   0.0  
ref|XP_010037577.1| PREDICTED: RNA-dependent RNA polymerase 2 [E...  1010   0.0  
ref|XP_011028594.1| PREDICTED: RNA-dependent RNA polymerase 2 [P...  1009   0.0  
ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependen...  1004   0.0  
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2 [S...  1002   0.0  
ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Th...  1001   0.0  
ref|XP_012080102.1| PREDICTED: RNA-dependent RNA polymerase 2 is...   999   0.0  
ref|XP_012080101.1| PREDICTED: RNA-dependent RNA polymerase 2 is...   999   0.0  
emb|CDP19325.1| unnamed protein product [Coffea canephora]            999   0.0  
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   997   0.0  
ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [N...   996   0.0  
ref|XP_010913557.1| PREDICTED: probable RNA-dependent RNA polyme...   995   0.0  
ref|XP_008453109.1| PREDICTED: RNA-dependent RNA polymerase 2 [C...   994   0.0  

>ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nelumbo nucifera]
            gi|720051127|ref|XP_010271988.1| PREDICTED: RNA-dependent
            RNA polymerase 2 [Nelumbo nucifera]
          Length = 1115

 Score = 1039 bits (2686), Expect = 0.0
 Identities = 507/736 (68%), Positives = 612/736 (83%), Gaps = 3/736 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            +TPTKIY LGPE+E +N VV+HYA ++SDF+RV+FVEEDW+KL S A+ST+I +G+FSKP
Sbjct: 379  VTPTKIYCLGPELEKSNCVVRHYAAYSSDFLRVSFVEEDWTKLHSGALSTSIEEGIFSKP 438

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +Y+RILSILR+GI+IG KRFEFLAFSASQLRS+SVWMFASN+TVK E+IREWMG F
Sbjct: 439  YRTRIYYRILSILRDGIKIGAKRFEFLAFSASQLRSNSVWMFASNETVKAENIREWMGSF 498

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
             +  +VSKCAARMGQLFSSS +   V+   V  I D+E+T DG+ YCFSDGIGKIS + A
Sbjct: 499  NKIRSVSKCAARMGQLFSSSVEASKVQAHHVEIIPDVEITRDGIQYCFSDGIGKISQSFA 558

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            ++VA+KCGL++ PSAFQIRYGGYKGVIAVD  S+ KLSLR SM KF S++R LN+T W+E
Sbjct: 559  REVAQKCGLSQTPSAFQIRYGGYKGVIAVDRNSFCKLSLRPSMLKFDSNDRTLNVTKWSE 618

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLE-EMGDVKSIL 1465
             +PCYLNRE+VSLLSTLG++DEKFE +  +QI LL++MLTN+EAAL+VLE   GD K++L
Sbjct: 619  SMPCYLNREIVSLLSTLGVEDEKFEMLQCKQISLLDKMLTNREAALDVLECTAGDAKTVL 678

Query: 1464 VKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQV 1285
            VKMLL GYEP  EPYL+++LRA+R +QLSDIRSK RI VPKGRVL+GCLDETGIL+YGQV
Sbjct: 679  VKMLLHGYEPGVEPYLSMILRAHREHQLSDIRSKCRILVPKGRVLLGCLDETGILNYGQV 738

Query: 1284 YVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE-- 1111
            ++RVTMT+AE     Q+FF +              TKNPCLHPGDIRVL+A+YE  LE  
Sbjct: 739  FIRVTMTKAEQCHDDQSFFHQVDETTSIVIGKVVITKNPCLHPGDIRVLDAIYESALEEK 798

Query: 1110 GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDHD 931
            G VDCLVFPQKGERPHPNECSGGDLDGDL+FVCWDENLIP  TDTPMDYI RR+R+ DH+
Sbjct: 799  GLVDCLVFPQKGERPHPNECSGGDLDGDLFFVCWDENLIPSQTDTPMDYIGRRSRLMDHE 858

Query: 930  VTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTGA 751
            VTLEEIQK+FV+YMIND LG ISTAH++HADREP KARSPKCLQLA LHSMAVDFAKTGA
Sbjct: 859  VTLEEIQKYFVNYMINDTLGVISTAHVIHADREPSKARSPKCLQLAALHSMAVDFAKTGA 918

Query: 750  PAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAAY 571
            PAE PR L+PKEYPDFMER DR MY SPG+LGKLYR+T+D T++Q PD +W+EEVAQAAY
Sbjct: 919  PAEMPRVLKPKEYPDFMERGDRPMYASPGILGKLYRSTIDSTKNQEPDFVWNEEVAQAAY 978

Query: 570  DHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRKK 391
            D DL V GFES +  AES+K LY EKL+ LMNYYGA SE EI+TGNLR+ S+ L+RD+ +
Sbjct: 979  DKDLEVRGFESFVETAESHKKLYTEKLSTLMNYYGARSEDEILTGNLRSPSLCLQRDKIR 1038

Query: 390  YREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFAW 211
            Y E+KDR+LI+V++LQ EAKGWF SSC+  + ++MASAWYHVTYH  YC + + +LSF W
Sbjct: 1039 YGEMKDRVLIAVRNLQKEAKGWFHSSCKSHECHKMASAWYHVTYHPKYCHNGMNSLSFPW 1098

Query: 210  IVGDRLLDIKSLNRRR 163
            I+ D LL+IKS+ + R
Sbjct: 1099 ILDDILLNIKSVKKMR 1114


>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
            gi|297733815|emb|CBI15062.3| unnamed protein product
            [Vitis vinifera]
          Length = 1127

 Score = 1035 bits (2675), Expect = 0.0
 Identities = 510/739 (69%), Positives = 601/739 (81%), Gaps = 4/739 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            +TP+KIY LGPE+E++NYVVKHYA +ASDF+RV+FVEEDWSKLPS+A+S +I +  F+ P
Sbjct: 378  VTPSKIYCLGPELESSNYVVKHYAAYASDFVRVSFVEEDWSKLPSNALSMSIRKAFFADP 437

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +YHRILSILR GI IG KRF+FLAFSASQLRS+SVWMFASND V+ +DIREWMGCF
Sbjct: 438  FRTEIYHRILSILREGIVIGAKRFQFLAFSASQLRSNSVWMFASNDKVRVDDIREWMGCF 497

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
            K+  +VSKCAARMGQLFSSS QT  V  +DV  I DIEVT+DG  YCFSDGIGKIS + A
Sbjct: 498  KKIRSVSKCAARMGQLFSSSVQTLPVPVQDVEVIPDIEVTSDGFGYCFSDGIGKISLSFA 557

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            KQVA+KCGL++ PSAFQIRYGGYKGVIAVD  S++KLSLR SM KF S NRMLN+T W+E
Sbjct: 558  KQVAQKCGLHQTPSAFQIRYGGYKGVIAVDRNSFRKLSLRSSMLKFESQNRMLNVTKWSE 617

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEMG--DVKSI 1468
              PCYLNRE+VSLLSTLG++DE FEA+L EQ+HLL++MLTN++AAL+VLE MG  D K+I
Sbjct: 618  STPCYLNREIVSLLSTLGVEDENFEALLNEQMHLLDKMLTNRQAALDVLESMGGIDNKNI 677

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            L KMLLQGYEPN EPYL++ML+AYR  QLSDIR++ RIFVPK RVL+GCLDETGIL+YGQ
Sbjct: 678  LAKMLLQGYEPNVEPYLSMMLQAYRESQLSDIRTRCRIFVPKARVLIGCLDETGILNYGQ 737

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE- 1111
            VYVRVTMT+AE +C  Q+FF+K              TKNPCLHPGDIRVL+AVYE  LE 
Sbjct: 738  VYVRVTMTKAEHKCRNQSFFQKVDDTTSVVIGKVIVTKNPCLHPGDIRVLDAVYEVELEE 797

Query: 1110 -GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
             G VDC++FPQKGERPHPNECSGGDLDGD +F+CWDE LIP  T+ PMDY +RR RI DH
Sbjct: 798  KGLVDCILFPQKGERPHPNECSGGDLDGDQFFICWDEGLIPSQTEAPMDYTSRRPRIMDH 857

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
            DVTLEEIQKFFVDYMIND LG ISTAHLVHADREP+KARS KCL+LATLHSMAVDFAKTG
Sbjct: 858  DVTLEEIQKFFVDYMINDTLGVISTAHLVHADREPEKARSKKCLELATLHSMAVDFAKTG 917

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            APAE PR L+PKE+PDFMER D+ MY+S G LGKLYRAT+    ++    +WS  +  AA
Sbjct: 918  APAEMPRVLKPKEFPDFMERVDKPMYISNGALGKLYRATIASRVNEKSSFVWSGTIPGAA 977

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YDHDL VDGFE+ L  A+ +K +Y EK+  LMN+YGAESE E++TGNLRN+ MYL+RD +
Sbjct: 978  YDHDLEVDGFETFLEIAKLHKEMYAEKMATLMNFYGAESEDEMLTGNLRNKLMYLQRDNR 1037

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            ++ E+KDRILISVK LQ EAK W   SC+  +  +MASAWYHVTYH ++       LSF 
Sbjct: 1038 RFTEMKDRILISVKSLQKEAKEWLYGSCKPHQHQKMASAWYHVTYHSTFSSQTPNFLSFP 1097

Query: 213  WIVGDRLLDIKSLNRRRIE 157
            WIVG+ LL IKS N R+ E
Sbjct: 1098 WIVGEVLLVIKSANSRKAE 1116


>ref|XP_010107450.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
            gi|587928851|gb|EXC16034.1| RNA-dependent RNA polymerase
            2 [Morus notabilis]
          Length = 1115

 Score = 1034 bits (2674), Expect = 0.0
 Identities = 505/737 (68%), Positives = 604/737 (81%), Gaps = 4/737 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            ITP+KIY +GPE+ET+NYVVK++A +ASDF+RVTFVEEDW KL    +ST+I QG+F+KP
Sbjct: 376  ITPSKIYCMGPELETSNYVVKNFAAYASDFLRVTFVEEDWGKLHPHVVSTSIEQGIFAKP 435

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +Y RILSILRNGI IG KR+EFLAFSASQLRSS+VWMFASND VK EDIREWMGCF
Sbjct: 436  YRTGIYDRILSILRNGILIGAKRYEFLAFSASQLRSSAVWMFASNDNVKAEDIREWMGCF 495

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
             +  +VSKCAARMGQLFSSS+QT IV  +D+  I D+EVT DG++YCFSDGIGKIS + A
Sbjct: 496  NKIRSVSKCAARMGQLFSSSRQTLIVPTQDLEIIPDVEVTTDGIDYCFSDGIGKISSSFA 555

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            +QVA+KCGL + PSAFQIRYGGYKGVIAV+  S++KLSLR SM KF S NRMLN+T W+ 
Sbjct: 556  RQVAQKCGLKETPSAFQIRYGGYKGVIAVNRSSFRKLSLRSSMLKFESSNRMLNVTKWSG 615

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEMG--DVKSI 1468
             +PCYLNRE+VSLLS+LG++DE F A+LREQ+ LL +M TN+EAALNVLE +   D  +I
Sbjct: 616  SMPCYLNREIVSLLSSLGVKDESFLALLREQLLLLGKMRTNREAALNVLENLNGSDSSNI 675

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            LVKMLLQGYEPN EPYL++M+++Y   QLSD++++ RIFVPKG+VL+GCLDETGIL+YGQ
Sbjct: 676  LVKMLLQGYEPNAEPYLSMMIQSYYENQLSDLKTRCRIFVPKGKVLIGCLDETGILEYGQ 735

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE- 1111
            VYVR+TM +AEL+ G Q+FF+K              TKNPCLHPGD+RVLEAVY+  LE 
Sbjct: 736  VYVRLTMKKAELEAGNQSFFRKVDDETSIVVGKVVVTKNPCLHPGDVRVLEAVYDAKLEE 795

Query: 1110 -GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
             G VDCLVFPQKGERPHPNECSGGDLDGDL+F+ WD NLIP  T  PMDYI RR RI DH
Sbjct: 796  EGLVDCLVFPQKGERPHPNECSGGDLDGDLFFISWDTNLIPPRTTAPMDYIGRRPRIMDH 855

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
            DVTLEEIQKFFVDYMIND LG ISTAHL+HADREP+KA S  CLQLATLHSMAVDFAKTG
Sbjct: 856  DVTLEEIQKFFVDYMINDTLGGISTAHLIHADREPEKAFSENCLQLATLHSMAVDFAKTG 915

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            APAE PRALRP++YPDFMER DR MYVS G LGKLYRAT++     + +L+WSE+ A+AA
Sbjct: 916  APAEMPRALRPRDYPDFMERLDRPMYVSNGALGKLYRATVESESQGSSNLVWSEKTAEAA 975

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YD DL V+GFE  +A AES++ +YI+K+N +MNYY  ESE E++TGNLR R+ YL+RD +
Sbjct: 976  YDRDLEVNGFEEFIALAESHRDMYIDKMNGIMNYYELESEDEVLTGNLRKRAAYLQRDNR 1035

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            +Y EVKDRIL++VK LQ EAKGWF+ SCE  ++ +MASAWYHVTYH +Y    I  LSF 
Sbjct: 1036 RYFEVKDRILLAVKSLQREAKGWFEGSCEAMEQQKMASAWYHVTYHPNYYQKSINCLSFP 1095

Query: 213  WIVGDRLLDIKSLNRRR 163
            WI GD LL+IKS+N +R
Sbjct: 1096 WIKGDILLNIKSINSQR 1112


>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
          Length = 1131

 Score = 1027 bits (2655), Expect = 0.0
 Identities = 497/737 (67%), Positives = 610/737 (82%), Gaps = 4/737 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            +TP KIY LGPE+ET+NYVVK++AK+ASDFMRVTFVEEDWSKLP++A+ST+I +G+F+KP
Sbjct: 394  VTPMKIYCLGPELETSNYVVKNFAKYASDFMRVTFVEEDWSKLPANALSTSIQRGIFAKP 453

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +Y RIL+IL++GI IG K +EFLAFSASQLR++SVWMFASND V  ED+REWMGCF
Sbjct: 454  YRTKIYSRILTILQDGIVIGDKHYEFLAFSASQLRNNSVWMFASNDEVSAEDVREWMGCF 513

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
             +  +VSKCAARMGQLFSSS+QT +V  +DV  I D+EVT+DG  YCFSDGIGKIS + A
Sbjct: 514  NKIHSVSKCAARMGQLFSSSKQTLVVPVQDVEMIPDVEVTSDGNTYCFSDGIGKISLSFA 573

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            +QVA+KCGL+  PSAFQIRYGGYKGVIAVD  S++KLSLR+SM KF S NRMLN+T W+E
Sbjct: 574  RQVAQKCGLSHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESRNRMLNVTKWSE 633

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEMG--DVKSI 1468
             +PC+LNRE++SLLSTLG++D+ FEAM ++Q+ LL +ML N+EAAL+VL+++   D K+I
Sbjct: 634  SMPCFLNREIISLLSTLGVKDDVFEAMQQQQLILLGKMLINREAALDVLQKLNGVDSKNI 693

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            LVKMLLQGYEPN EPYL++ML ++   QLSD++S+ RI+VPKGR+L+GC DETGIL+YGQ
Sbjct: 694  LVKMLLQGYEPNVEPYLSMMLLSHHENQLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQ 753

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE- 1111
            V+VRVTMTR EL+   Q+FF +              TKNPCLHPGD+RVLEAVYE  LE 
Sbjct: 754  VFVRVTMTREELESKDQSFFHRVDDKTSIVKGKVLVTKNPCLHPGDVRVLEAVYEMKLEE 813

Query: 1110 -GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
              +VDC++FPQKGERPHPNECSGGDLDGD++F+ WD +LIP  T+ PMDY  RR+RI DH
Sbjct: 814  KDYVDCIIFPQKGERPHPNECSGGDLDGDIFFISWDNDLIPCETEPPMDYTGRRSRIMDH 873

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
            DVTLEEI KFFVDYMIND LG+ISTAHLVHADR+P KARS KCL LATLHSMAVDFAKTG
Sbjct: 874  DVTLEEIHKFFVDYMINDTLGAISTAHLVHADRDPDKARSSKCLHLATLHSMAVDFAKTG 933

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            APAE P AL+PKE+PDFMERED+  Y+S GVLGKLYRATLD       + IWSE++A+A+
Sbjct: 934  APAEMPLALKPKEFPDFMEREDKPRYISFGVLGKLYRATLDSIMQIRSNAIWSEKIAEAS 993

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YDHDL VDGFE+ L  AES+K +Y E++N LMNYYGA +E EI+TGNLRNR+ YL+RD +
Sbjct: 994  YDHDLEVDGFEAFLGVAESHKEMYEEEMNALMNYYGASTEDEILTGNLRNRASYLQRDNR 1053

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            +Y ++KDRIL+S K+LQNEAK WF SSC+E +  Q+ASAWYHVTY  SYC + +  LSF 
Sbjct: 1054 RYGDMKDRILLSAKNLQNEAKEWFGSSCKENEHPQLASAWYHVTYSPSYCKERMALLSFP 1113

Query: 213  WIVGDRLLDIKSLNRRR 163
            WIVGD LL+IKS+N R+
Sbjct: 1114 WIVGDILLNIKSVNSRK 1130


>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 983

 Score = 1026 bits (2654), Expect = 0.0
 Identities = 498/739 (67%), Positives = 606/739 (82%), Gaps = 4/739 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            ITP+KIY LGPE+E++NYVVK++A +ASDFMRVTFVEEDWSKLP++AIS +I +G+F+KP
Sbjct: 228  ITPSKIYCLGPELESSNYVVKNFASYASDFMRVTFVEEDWSKLPANAISMSIQRGIFAKP 287

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +YHRILSILR+GI IG K+FEFLAFSASQLRS+SVWMFASND  K E+IREWMGCF
Sbjct: 288  FRTGIYHRILSILRDGIVIGAKKFEFLAFSASQLRSNSVWMFASNDKKKAEEIREWMGCF 347

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
             +  ++SKCAARMGQLFSSS+QTFIV P+D+  I DIEVT+DG+NYCFSDGIGKIS + A
Sbjct: 348  NKIHSISKCAARMGQLFSSSKQTFIVSPQDMEIIPDIEVTSDGINYCFSDGIGKISLSFA 407

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            +QVA+KCGLN+ PSAFQIRYGGYKGVIAVD  S++KLSLR SM KF S+NRMLN+T W+E
Sbjct: 408  RQVAQKCGLNRTPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMCKFESENRMLNVTKWSE 467

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEMG--DVKSI 1468
             +PCYLNRE+++LL+TLG++DE FE + ++Q+ LLN MLTN+E+ALNVLE +   + K+I
Sbjct: 468  SMPCYLNREIITLLTTLGVKDEIFEGLQQQQLQLLNRMLTNRESALNVLENLAWANCKNI 527

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            L+KML+QGYEPN EPYL++ML+AY    L ++RS+ RIFVPKGR+L+GCLDET ILDYGQ
Sbjct: 528  LIKMLVQGYEPNVEPYLSMMLQAYHENLLVELRSRCRIFVPKGRILIGCLDETRILDYGQ 587

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE- 1111
            VYVR+TMT+AELQ   Q  F +              TKNPCLHPGDIRVLEAVYE  LE 
Sbjct: 588  VYVRITMTKAELQDADQASFHRVDETTAVVTGKVIVTKNPCLHPGDIRVLEAVYEVELEE 647

Query: 1110 -GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
             G VDC++FPQKGERPHPNECSGGDLDGD +F+ WD+ LIP  T++PMDY  RR R  DH
Sbjct: 648  KGLVDCILFPQKGERPHPNECSGGDLDGDQFFISWDKGLIPGETESPMDYQGRRPRKMDH 707

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
            DVTLEEIQKFF+DYMIND LG+ISTAHLVHADREP KARS KCLQLA LHSMAVDFAKTG
Sbjct: 708  DVTLEEIQKFFIDYMINDTLGAISTAHLVHADREPDKARSSKCLQLAELHSMAVDFAKTG 767

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            APAE P+AL+PKE+PDFMER D+ MY+S GVLGKLYR TLD T  Q    +W+E +A+A 
Sbjct: 768  APAEMPKALKPKEFPDFMERIDKKMYISGGVLGKLYRGTLDSTRQQRSKFVWTENIAEAT 827

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YDHDL V GFE  +  A S+K +Y+EKL+ LM+YY A+ E EI+TGNL+N++MYL+RD +
Sbjct: 828  YDHDLEVKGFEEFVEIAISHKDMYVEKLSGLMDYYEAKKEDEILTGNLQNKAMYLQRDNR 887

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            +Y + KDRILISVK LQ EAK WF+S C+  ++ ++ASAWYHVTYH SY  + I  LSF 
Sbjct: 888  RYGDTKDRILISVKSLQKEAKEWFESCCQAKEKQRLASAWYHVTYHPSYFQEGITCLSFP 947

Query: 213  WIVGDRLLDIKSLNRRRIE 157
            WIV D LL+IKS N + ++
Sbjct: 948  WIVADILLNIKSANSKNLK 966


>gb|KDO69723.1| hypothetical protein CISIN_1g001183mg [Citrus sinensis]
          Length = 1131

 Score = 1026 bits (2653), Expect = 0.0
 Identities = 498/737 (67%), Positives = 609/737 (82%), Gaps = 4/737 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            +TP KIY LGPE+ET+NYVVK++AK+ASDFMRVTFVEEDWSKLP++A+ST+I +G+FSKP
Sbjct: 394  VTPMKIYCLGPELETSNYVVKNFAKYASDFMRVTFVEEDWSKLPANALSTSIQRGIFSKP 453

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +Y RIL+IL++GI IG K +EFLAFSASQLR++SVWMFASND V  ED+R WMGCF
Sbjct: 454  YRTKIYSRILTILQDGIVIGDKHYEFLAFSASQLRNNSVWMFASNDEVSAEDVRGWMGCF 513

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
             +  +VSKCAARMGQLFSSS+QT +V  +DV  I D+EVT+DG  YCFSDGIGKIS + A
Sbjct: 514  NKIRSVSKCAARMGQLFSSSKQTLVVPVQDVEMIPDVEVTSDGNTYCFSDGIGKISLSFA 573

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            +QVA+KCGL+  PSAFQIRYGGYKGVIAVD  S++KLSLR+SM KF S NRMLN+T W+E
Sbjct: 574  RQVAQKCGLSHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESRNRMLNVTKWSE 633

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEMG--DVKSI 1468
             +PC+LNRE++SLLSTLG++DE FEAM ++Q+ LL +ML N+EAAL+VL+++   D K+I
Sbjct: 634  SMPCFLNREIISLLSTLGVKDEVFEAMQQQQLILLGKMLINREAALDVLQKLNGVDSKNI 693

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            LVKMLLQGYEPN EPYL++ML ++   QLSD++S+ RI+VPKGR+L+GC DETGIL+YGQ
Sbjct: 694  LVKMLLQGYEPNVEPYLSMMLLSHHENQLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQ 753

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE- 1111
            V+VRVTMTR EL+   Q+FF +              TKNPCLHPGD+RVLEAVYE  LE 
Sbjct: 754  VFVRVTMTREELESKDQSFFHRVDDKTSIVKGKVLVTKNPCLHPGDVRVLEAVYEMKLEE 813

Query: 1110 -GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
              +VDC++FPQKGERPHPNECSGGDLDGD++F+ WD +LIP  T+ PMDY  RR+RI DH
Sbjct: 814  KDYVDCIIFPQKGERPHPNECSGGDLDGDIFFISWDNDLIPCETEPPMDYTGRRSRIMDH 873

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
            DVTLEEI KFFVDYMIND LG+ISTAHLVHADR+P KARS KCL LATLHSMAVDFAKTG
Sbjct: 874  DVTLEEIHKFFVDYMINDTLGAISTAHLVHADRDPDKARSSKCLHLATLHSMAVDFAKTG 933

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            APAE P AL+PKE+PDFMERED+  Y+S GVLGKLYRATLD       + IWSE++A+A+
Sbjct: 934  APAEMPLALKPKEFPDFMEREDKPRYISFGVLGKLYRATLDSIMQIRSNAIWSEKIAEAS 993

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YDHDL VDGFE+ L  AES+K +Y E++N LMNYYGA +E EI+TGNLRNR+ YL+RD +
Sbjct: 994  YDHDLEVDGFEAFLGVAESHKEMYEEEMNALMNYYGASTEDEILTGNLRNRASYLQRDNR 1053

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            +Y ++KDRIL+S K+LQNEAK WF SSC+E +  Q+ASAWYHVTY  SYC + +  LSF 
Sbjct: 1054 RYGDMKDRILLSAKNLQNEAKEWFGSSCKENEHPQLASAWYHVTYSPSYCKERMALLSFP 1113

Query: 213  WIVGDRLLDIKSLNRRR 163
            WIVGD LL+IKS+N R+
Sbjct: 1114 WIVGDILLNIKSVNSRK 1130


>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
            gi|222868578|gb|EEF05709.1| hypothetical protein
            POPTR_0015s08500g [Populus trichocarpa]
          Length = 1110

 Score = 1017 bits (2630), Expect = 0.0
 Identities = 495/736 (67%), Positives = 601/736 (81%), Gaps = 4/736 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            ITP+KI+ LGPE ET+NYVVKH+A++ASDF+RVTFVEEDWSKLP++AIST+I +G+F+KP
Sbjct: 373  ITPSKIFCLGPEYETSNYVVKHFAQYASDFIRVTFVEEDWSKLPANAISTSIQRGIFAKP 432

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +YHRILSILR+G  IG KRFEFLAFSASQLRS+SVWMFASN+ VK EDIR+WMGCF
Sbjct: 433  FRTGIYHRILSILRDGFVIGAKRFEFLAFSASQLRSNSVWMFASNNGVKAEDIRKWMGCF 492

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
             +  +VSKCAARMGQLFSSS QTF+V  +DV  I DIEVT DG++YCFSDGIGKIS + A
Sbjct: 493  DKIRSVSKCAARMGQLFSSSLQTFVVPVQDVEIIPDIEVTTDGIDYCFSDGIGKISLSFA 552

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            KQVA KCGL+  PSAFQIRYGGYKGV+AVD  S++KLSLR SM KF S+NRMLN+T W+E
Sbjct: 553  KQVAHKCGLSHTPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFDSENRMLNVTKWSE 612

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEMG--DVKSI 1468
             +PCYLNRE++SLLSTLG+ DE F+A+ ++Q++ L +MLTNKE+AL+VLE +   D K+I
Sbjct: 613  SMPCYLNREIISLLSTLGVADEIFQALQQKQLYRLRKMLTNKESALDVLENLAWADSKNI 672

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            LV+MLLQGYEPN EPYL++ML+AY    L ++RS+ RIFVPKGR+L+GCLDE+GILDYGQ
Sbjct: 673  LVQMLLQGYEPNVEPYLSMMLQAYHENSLMELRSRCRIFVPKGRILIGCLDESGILDYGQ 732

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE- 1111
            VYVR+TMT+AELQC  Q+FF+K              TKNPCLHPGDIRVLEAVY+  LE 
Sbjct: 733  VYVRITMTKAELQCCDQSFFRKVDESTSTIIGEVAVTKNPCLHPGDIRVLEAVYDVELEE 792

Query: 1110 -GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
             G VDC++FPQ G RPHPNECSGGDLDGD +F+ WDE L+P HT+ PMDY+  R RI DH
Sbjct: 793  KGLVDCIIFPQNGGRPHPNECSGGDLDGDQFFISWDEGLLPCHTEAPMDYVGGRQRIMDH 852

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
            +VTLEEIQ+FFVDYMIND LG+ISTAHLVHAD EP KARS KCLQLATLHSMAVDFAKTG
Sbjct: 853  NVTLEEIQRFFVDYMINDTLGAISTAHLVHADCEPDKARSEKCLQLATLHSMAVDFAKTG 912

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            APAE P  L+P+E+PDFMER ++ MY+S GVLGKLYR   D T  +  + +WS+++A+A 
Sbjct: 913  APAEMPLYLKPREFPDFMERAEKQMYISDGVLGKLYRDIHDSTRQERSNFMWSKKIAEAT 972

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YD DL V GFE  L  A  YK  Y+EK++ LM+YYGA++E EI+TGNLR+R  YL+RD +
Sbjct: 973  YDQDLEVKGFEDFLGIASIYKEKYMEKMSTLMDYYGAKTEDEILTGNLRHRPTYLQRDNR 1032

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            KY +VKDRIL+S+K+L+ EAK WF+SSC   +   MASAWYHVTYH +Y  + +  LSF 
Sbjct: 1033 KYGDVKDRILVSLKNLKKEAKEWFESSCNPTEHQCMASAWYHVTYHPTYFHERMNCLSFP 1092

Query: 213  WIVGDRLLDIKSLNRR 166
            WIVGD LL+IKSLN R
Sbjct: 1093 WIVGDILLNIKSLNSR 1108


>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
            gi|462407047|gb|EMJ12511.1| hypothetical protein
            PRUPE_ppa000513mg [Prunus persica]
          Length = 1118

 Score = 1013 bits (2618), Expect = 0.0
 Identities = 493/737 (66%), Positives = 598/737 (81%), Gaps = 4/737 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            ITP+KI  LGPE+E +NYVVK++A +ASDFMRVTFV+EDWSKLP++AIST+I QG+F+KP
Sbjct: 379  ITPSKICCLGPELEKSNYVVKNFAAYASDFMRVTFVDEDWSKLPANAISTSIQQGIFAKP 438

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +YHR+LSILR+GI IG KRFEFLAFSASQLRSSSVWMF+SND VK EDIREWMGCF
Sbjct: 439  HRTGIYHRMLSILRDGIVIGEKRFEFLAFSASQLRSSSVWMFSSNDNVKAEDIREWMGCF 498

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
             +  ++SKCAARMGQLFSSS QT +V  +DV  I D+E ++DGV YCFSDGIGKIS + A
Sbjct: 499  SKIRSISKCAARMGQLFSSSTQTLVVPAQDVEIIPDVETSSDGVTYCFSDGIGKISLSFA 558

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            ++VA+KCGL++ PSAFQIRYGGYKGVIAVD +S++KLSLR SM KF S NRMLN+T W++
Sbjct: 559  RKVAQKCGLDQTPSAFQIRYGGYKGVIAVDCRSFRKLSLRSSMLKFESKNRMLNVTKWSD 618

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEMG--DVKSI 1468
             +PCYLNRE++SLLSTLG++DE FEA+  EQ+ LL +M T + AALNV E +   D K+ 
Sbjct: 619  AMPCYLNREIISLLSTLGVKDETFEALQEEQLRLLGKMRTERGAALNVFERLNGADSKNT 678

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            LVKMLL GYEPN EPYL++ML+AY    LSD++S+ RIFVPKGRVL+GCLDETG LDYGQ
Sbjct: 679  LVKMLLHGYEPNAEPYLSMMLQAYYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLDYGQ 738

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE- 1111
            VYVR+TMT+AE + G Q+FF+K              TKNPCLHPGD+RVL+AVY+  LE 
Sbjct: 739  VYVRITMTKAEQEMGDQSFFQKVDETTLVVTGKVVVTKNPCLHPGDVRVLDAVYDVVLEE 798

Query: 1110 -GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
               VDCL+FPQKGERPHPNECSGGDLDGDL+F+ WD++L+P HT  PMDY ARR RI DH
Sbjct: 799  KNMVDCLIFPQKGERPHPNECSGGDLDGDLFFISWDKDLVPSHTVPPMDYSARRPRIMDH 858

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
             VTLEEIQKFFVDYMINDNLG+ISTAHLVHAD EP KA +PKCLQLA LHSMAVDFAKTG
Sbjct: 859  TVTLEEIQKFFVDYMINDNLGAISTAHLVHADHEPDKALNPKCLQLADLHSMAVDFAKTG 918

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            APAE  R L+PKE+PDFMER D+ MY+S G LGKLYRA +     +  +L+WSE++A+AA
Sbjct: 919  APAEMSRTLKPKEFPDFMERVDKPMYISNGALGKLYRAVVGSVLQEKTNLVWSEQIAEAA 978

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YD DL VDG ES+L  A+ ++ +YIEK+  +MNYYGA +E EI+TGNLRNR+ YL+RD +
Sbjct: 979  YDQDLEVDGLESVLEVAKGHRDMYIEKMRTMMNYYGAVTEDEILTGNLRNRAAYLQRDNR 1038

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            +Y ++KDRI +S+K+LQ EAKG F+SSC   +  +MASAWYHVTYH SY    +  LSF 
Sbjct: 1039 RYGDMKDRISLSLKNLQKEAKGLFESSCPVSEHQRMASAWYHVTYHPSYFQQDMNCLSFP 1098

Query: 213  WIVGDRLLDIKSLNRRR 163
            WIVGD LL+IK+LN  R
Sbjct: 1099 WIVGDILLNIKALNNPR 1115


>ref|XP_010037577.1| PREDICTED: RNA-dependent RNA polymerase 2 [Eucalyptus grandis]
            gi|629082860|gb|KCW49305.1| hypothetical protein
            EUGRSUZ_K02861 [Eucalyptus grandis]
          Length = 1130

 Score = 1010 bits (2611), Expect = 0.0
 Identities = 488/737 (66%), Positives = 602/737 (81%), Gaps = 4/737 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            ITPTKIY LGPE+ET+NYVVK++A H+SDF+RV+FVEEDWSK+P +A+ST+  QG+FSKP
Sbjct: 392  ITPTKIYCLGPELETSNYVVKNFASHSSDFLRVSFVEEDWSKIPPNALSTSTQQGIFSKP 451

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +YHRIL++LR GI IG K+F+FLAFSASQLRS+SVWMFASND V  E IREWMGCF
Sbjct: 452  LRTGIYHRILTVLREGIVIGKKKFQFLAFSASQLRSNSVWMFASNDEVTAEQIREWMGCF 511

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
             +  +VSKCAARMGQ+FSSS QT +V   DV  I DIEV   G ++CFSDGIGKIS + A
Sbjct: 512  NKIRSVSKCAARMGQMFSSSVQTMVVPAHDVEIIPDIEVNTRGFDFCFSDGIGKISQSFA 571

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            +QVA+KCGL   PSAFQIRYGGYKGVIAVD +S++KLSLR+SM+KF S NRMLN+T W+ 
Sbjct: 572  RQVAQKCGLTDSPSAFQIRYGGYKGVIAVDRRSFRKLSLRESMRKFESSNRMLNVTQWSN 631

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEM--GDVKSI 1468
             LPCYLNRE+++LLSTL ++DEKFEAM ++Q+ +L +MLT++EAAL+VLE +   D ++I
Sbjct: 632  SLPCYLNREIITLLSTLEVEDEKFEAMQQKQLLILGKMLTDREAALSVLESLSGADRRNI 691

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            + KMLL GYEP  +PYL +MLRA+   QLS+++S+ RI +PKGR+L+GCLDE GILDYGQ
Sbjct: 692  IAKMLLAGYEPTADPYLLMMLRAHHEIQLSELKSRCRIHIPKGRILLGCLDEAGILDYGQ 751

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE- 1111
            VYVRVTMT+AEL+ G Q FF+K              TKNPCLHPGDIRVL+AV+E  LE 
Sbjct: 752  VYVRVTMTKAELESGEQRFFRKVDETTAAVIGKVVVTKNPCLHPGDIRVLKAVFEVELEE 811

Query: 1110 -GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
             G VDC++FP+KGERPHPNECSGGDLDGDL+F+ WDE++IP HT+TPMDY  RR RITDH
Sbjct: 812  SGLVDCIIFPRKGERPHPNECSGGDLDGDLFFISWDEDIIPSHTETPMDYTGRRPRITDH 871

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
            DVTLEEI KFFVDYMIND LG+ISTAHLVHADRE +KARS KCLQLATLHSMAVDFAKTG
Sbjct: 872  DVTLEEIHKFFVDYMINDTLGAISTAHLVHADREQEKARSEKCLQLATLHSMAVDFAKTG 931

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            APAE PR L+P+E+PDFMER D+ MY S  VLGKLYRATL+ + +++  +IWS+E A+  
Sbjct: 932  APAEMPRVLKPREFPDFMERVDKPMYTSTNVLGKLYRATLELSLEKS-KIIWSDETAREY 990

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YDHDL VDGFE+ + RA +++  Y+EKL+ LM +YGAESE EI+TGNLRNR++YL+RD +
Sbjct: 991  YDHDLEVDGFEAFIDRAVTHRDKYMEKLSELMRFYGAESEDEILTGNLRNRAIYLQRDNR 1050

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            KY ++KDRI +SVK+L  E KGWF+S CE  +R ++ASAWYHVTYH S+       LSF 
Sbjct: 1051 KYGDMKDRISLSVKNLHKEVKGWFESGCEASERERLASAWYHVTYHPSFVHGSFNFLSFP 1110

Query: 213  WIVGDRLLDIKSLNRRR 163
            WIVGD LL I+S+NR++
Sbjct: 1111 WIVGDVLLTIRSVNRKK 1127


>ref|XP_011028594.1| PREDICTED: RNA-dependent RNA polymerase 2 [Populus euphratica]
          Length = 1105

 Score = 1009 bits (2609), Expect = 0.0
 Identities = 495/736 (67%), Positives = 599/736 (81%), Gaps = 4/736 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            ITP+KI+ LGPE ET+NYVVKH+A++ASDF+RVTFVEEDWSKLP++AIST+I +G+F+KP
Sbjct: 373  ITPSKIFCLGPEYETSNYVVKHFAQYASDFIRVTFVEEDWSKLPANAISTSIQRGIFAKP 432

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +YHRILSILR+GI IG KRFEFLAFSASQLRS+SVWMFASN+ VK EDIR+WMGCF
Sbjct: 433  FRTGIYHRILSILRDGIVIGAKRFEFLAFSASQLRSNSVWMFASNNDVKAEDIRKWMGCF 492

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
             +  +VSKCAARMGQLFSSS QTF+V  +DV  I DIEVT DG++YCFSDGIGKIS + A
Sbjct: 493  DKIRSVSKCAARMGQLFSSSLQTFVVPVQDVEIIPDIEVTTDGIDYCFSDGIGKISLSFA 552

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            KQVA KCGL+  PSAFQIRYGGYKGV+AVD  S++KLSLR SM KF S+NRMLN+T W+E
Sbjct: 553  KQVAHKCGLSHTPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFDSENRMLNVTKWSE 612

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEM--GDVKSI 1468
             +PCYLNRE++SLLSTLG+ DE F+A+ ++Q++ L +MLTNKE+AL+VLE +   D K+I
Sbjct: 613  SMPCYLNREIISLLSTLGVADEIFQALQQKQLYQLRKMLTNKESALDVLENLVWADSKNI 672

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            LV+MLLQGYEPN EPYL++ML+AY    L ++RS+ RIFVPKGR+L+GCLDE+G LDYGQ
Sbjct: 673  LVQMLLQGYEPNVEPYLSMMLQAYHENSLMELRSRCRIFVPKGRILIGCLDESGTLDYGQ 732

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE- 1111
            VYVR+TMT+AELQC  Q+FF+K              TKNPCLHPGDIRVLEAVY   LE 
Sbjct: 733  VYVRITMTKAELQCSDQSFFRKVDESTSIIIGEVAVTKNPCLHPGDIRVLEAVYNVELEE 792

Query: 1110 -GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
             G VDC++FPQ G RPHPNECSGGDLDGD +F+ WDE L+P HT+ PMDY+  R RI DH
Sbjct: 793  KGLVDCIIFPQNGGRPHPNECSGGDLDGDQFFISWDEGLLPCHTEAPMDYVGGRQRIVDH 852

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
            +VTLEEIQ+FFVDYMIND LG+ISTAHLVHAD EP KARS KCLQLATLHSMAVDFAKTG
Sbjct: 853  NVTLEEIQRFFVDYMINDTLGAISTAHLVHADCEPDKARSEKCLQLATLHSMAVDFAKTG 912

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            APAE P  L+P+E+PDFMER ++ MY+S GVLGKLYR   D T  +      S+++A+A 
Sbjct: 913  APAEMPLYLKPREFPDFMERVEKKMYISDGVLGKLYRDIHDSTRQER-----SKKMAEAT 967

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YD DL V GFE  L  A  YK  Y+EK++ LM+YYGA++E EI+TGNLR+R  YL+RD +
Sbjct: 968  YDQDLEVKGFEDFLGIASIYKEKYMEKMSTLMDYYGAKTEDEILTGNLRHRPTYLQRDNR 1027

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            KY +VKDRIL+S+K+L+ EAK WF+SSC+  +   MASAWYHVTYH +Y  + +  LSF 
Sbjct: 1028 KYGDVKDRILVSLKNLKKEAKEWFESSCDPTEHQCMASAWYHVTYHPTYFHERMNCLSFP 1087

Query: 213  WIVGDRLLDIKSLNRR 166
            WIVGD LL+IKSLNRR
Sbjct: 1088 WIVGDILLNIKSLNRR 1103


>ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA polymerase 2
            [Prunus mume]
          Length = 1100

 Score = 1004 bits (2595), Expect = 0.0
 Identities = 489/737 (66%), Positives = 595/737 (80%), Gaps = 4/737 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            ITP+KI  LGPE+E +NYVVK++A +ASDFMRVTFV+EDWSKLP++AIST+I QG+F+KP
Sbjct: 361  ITPSKICCLGPELEKSNYVVKNFAAYASDFMRVTFVDEDWSKLPANAISTSIQQGIFAKP 420

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +YHR+LSILR+GI IG K FEFLAFSASQLRSSSVWMF+SND VK EDIREWMGCF
Sbjct: 421  HRTGIYHRMLSILRDGIVIGEKNFEFLAFSASQLRSSSVWMFSSNDNVKAEDIREWMGCF 480

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
             +  ++SKCAARMGQLFSSS QT +V  +DV  I D+E ++DGV YCFSDGIGKIS + A
Sbjct: 481  SKIRSISKCAARMGQLFSSSTQTLVVPAQDVEIIPDVETSSDGVTYCFSDGIGKISLSFA 540

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            ++VA+KCGL++ PSAFQIRYGGYKGVIAVD +S++KLSLR SM KF S N MLN+T W++
Sbjct: 541  RKVAQKCGLDQTPSAFQIRYGGYKGVIAVDCRSFRKLSLRSSMLKFESKNTMLNVTKWSD 600

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEMG--DVKSI 1468
             +PCYLNRE++SL+STLG++DE FEA+  EQ+ LL +M T + AALNVLE +   D K+ 
Sbjct: 601  AMPCYLNREIISLMSTLGVKDETFEALQEEQLRLLGKMRTERGAALNVLERLNGADSKNT 660

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            LVKMLL GYEPN EPYL++ML+AY    LSD++S+ RIFVPKGRVL+GCLDETG LDYGQ
Sbjct: 661  LVKMLLHGYEPNVEPYLSMMLQAYYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLDYGQ 720

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE- 1111
            VYVR+TMT+AE + G Q+FF+K              TKNPCLHPGD+RVL+AVY+  LE 
Sbjct: 721  VYVRITMTKAEQEMGDQSFFQKVDETTCIVTGKVVVTKNPCLHPGDVRVLDAVYDVVLEE 780

Query: 1110 -GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
               VDCL+FPQKGERPHPNECSGGDLDGDL+F+ WD++L+P HT  PMDY ARR RI DH
Sbjct: 781  KNMVDCLIFPQKGERPHPNECSGGDLDGDLFFISWDKDLVPSHTVPPMDYSARRPRIMDH 840

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
             VTLEEIQKFFVDYMINDNLG+ISTAHLVHAD EP KA +PKCLQLA LHSMAVDFAKTG
Sbjct: 841  TVTLEEIQKFFVDYMINDNLGAISTAHLVHADHEPDKALNPKCLQLADLHSMAVDFAKTG 900

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            APAE  R L+PKE+PDFMER D+ MY+S G LGKLYRA +     +  +L+WSE++A+AA
Sbjct: 901  APAEMSRTLKPKEFPDFMERVDKPMYISNGALGKLYRAVVGSVLQEKTNLVWSEQIAEAA 960

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YD DL VDG ES+L  A+ ++  YIEK+  +MN YGA +E EI+TGNLRNR+ YL+RD +
Sbjct: 961  YDQDLEVDGLESVLEVAKGHRDTYIEKMRTIMNNYGAVTEDEILTGNLRNRAAYLQRDNR 1020

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            +Y ++KDRI +S+K+LQ EAKG F+SSC   +  +MASAWYHVTYH SY    +  LSF 
Sbjct: 1021 RYGDMKDRISLSLKNLQKEAKGMFESSCPVSEHQRMASAWYHVTYHPSYFQQDMNCLSFP 1080

Query: 213  WIVGDRLLDIKSLNRRR 163
            WIVGD LL+IK++N  R
Sbjct: 1081 WIVGDILLNIKAVNNAR 1097


>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2 [Solanum lycopersicum]
          Length = 1119

 Score = 1002 bits (2591), Expect = 0.0
 Identities = 485/737 (65%), Positives = 593/737 (80%), Gaps = 4/737 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            +TP+KIY LGPE+ET+NY+VK++A HASDF+RVTFVEEDW KL  +A+S ++ QG+F+KP
Sbjct: 380  VTPSKIYCLGPELETSNYIVKNFASHASDFLRVTFVEEDWGKLFPNAVSMSVEQGIFAKP 439

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +YHRILSILR GI IG KRF FLAFSASQLRS+SVWMFASN+ VK EDIREWMGCF
Sbjct: 440  YRTKIYHRILSILREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCF 499

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
             +  ++SKCAARMGQLFS+S QT  V+ + V  + DIEVT+DGV+YCFSDGIGKIS A A
Sbjct: 500  NKIRSISKCAARMGQLFSTSVQTMEVKLQHVEILPDIEVTSDGVSYCFSDGIGKISQAFA 559

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            +QVA+KCGLN  PSAFQIRYGGYKGVIAVD  S++KLSLR SM KF S NRMLNIT W++
Sbjct: 560  RQVAQKCGLNHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSD 619

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEMG--DVKSI 1468
             +PCYLNRE+V LLSTLG++D+ FE +L   + LL +MLT  EAAL+VLE MG  +VK I
Sbjct: 620  AMPCYLNREIVILLSTLGVEDKAFEDLLDNHLCLLGKMLTTNEAALDVLESMGGGEVKKI 679

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            L++MLLQGY PN+EPYL++ML+++   Q+SD+RS+ RIF+PKGR+L+GCLDETGIL YGQ
Sbjct: 680  LMRMLLQGYAPNQEPYLSMMLQSHFENQISDLRSRCRIFIPKGRILVGCLDETGILKYGQ 739

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLEG 1108
            VYVR+TMT+AELQ G Q FF+K              TKNPCLHPGD+RVLEAVYE TLE 
Sbjct: 740  VYVRITMTKAELQNGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRVLEAVYEVTLEE 799

Query: 1107 --FVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
              +VDC++FPQKGERPHPNECSGGDLDGDLYF+CWDE+LIP  T TPMDY  RR RI DH
Sbjct: 800  KTWVDCIIFPQKGERPHPNECSGGDLDGDLYFICWDESLIPCQTVTPMDYTGRRPRIMDH 859

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
            +VTLEEIQ+FFVDYMI+D LG+ISTAHLVHADREP KA + KCLQLATLHSMAVDFAKTG
Sbjct: 860  EVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNSKCLQLATLHSMAVDFAKTG 919

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            A AE PR L+P+E+PDFMER D+ MY+S GVLGKLYR  +     +  D + ++   Q A
Sbjct: 920  AAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGVMKSYIRRNSDDLSADRAIQDA 979

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YDHDL+V+G+E+    A+++K +Y++ +N L+NYYGAE EVEI+TGNLR +S+YL+RD +
Sbjct: 980  YDHDLLVEGYEAFTETAKTHKAMYLDSMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNR 1039

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            +Y E+KDRIL+S K L  E KGWF S C+E    ++ASAWYHVTYH SYC +    L F 
Sbjct: 1040 RYFELKDRILVSAKSLHKEVKGWFTSCCQEDDHQKLASAWYHVTYHPSYCHESANCLGFP 1099

Query: 213  WIVGDRLLDIKSLNRRR 163
            W+VGD LL++KS N R+
Sbjct: 1100 WVVGDILLNMKSHNTRK 1116


>ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
            gi|590663258|ref|XP_007036162.1| RNA-dependent RNA
            polymerase 2 isoform 1 [Theobroma cacao]
            gi|508773406|gb|EOY20662.1| RNA-dependent RNA polymerase
            2 isoform 1 [Theobroma cacao] gi|508773407|gb|EOY20663.1|
            RNA-dependent RNA polymerase 2 isoform 1 [Theobroma
            cacao]
          Length = 1149

 Score = 1001 bits (2589), Expect = 0.0
 Identities = 485/741 (65%), Positives = 607/741 (81%), Gaps = 5/741 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            +TP+KIY LGPE+ET+NYVVK++A++ASDFMRV+FVEEDW KL ++AIST++  G+FSKP
Sbjct: 386  VTPSKIYCLGPELETSNYVVKNFAEYASDFMRVSFVEEDWGKLSANAISTSVQLGIFSKP 445

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +YHRILS+L++GI IG KRFEFLAFSASQLRS+SVWMFASND V  ED+REWMGCF
Sbjct: 446  FRTKIYHRILSVLQHGIVIGDKRFEFLAFSASQLRSNSVWMFASNDKVTAEDVREWMGCF 505

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
            K+  +VSKCAARMGQLFSSS  T +V  +DV  I DIEVT+DG+NYCFSDGIGKIS   A
Sbjct: 506  KKIRSVSKCAARMGQLFSSSLPTLVVPVQDVKIIPDIEVTSDGINYCFSDGIGKISLPFA 565

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            ++VA+KCGLN  PSAFQIRYGGYKGV+AVD  S++K+SLR SM KF S  RMLN+T W+E
Sbjct: 566  REVAQKCGLNDTPSAFQIRYGGYKGVVAVDRNSFRKMSLRGSMHKFESKIRMLNVTKWSE 625

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEM--GDVKSI 1468
             +PC+LNRE+V+LLSTLGI+DE FE + +EQ+HLL +MLTN+EAAL+VL+ +   D ++I
Sbjct: 626  SMPCFLNREIVTLLSTLGIKDEAFETLQQEQLHLLGQMLTNREAALDVLQSLCGADSQNI 685

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            LVKMLLQGYEPN EPYL++ML A     LSD++ + RI+VPKG+VL+GCLDET  L+YGQ
Sbjct: 686  LVKMLLQGYEPNVEPYLSMMLLANHVSLLSDLKCRCRIYVPKGQVLVGCLDETATLNYGQ 745

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE- 1111
            VYVR+++ +AEL+   Q FF K              TKNPCLHPGD+RVLEAVYE  LE 
Sbjct: 746  VYVRLSIKKAELEHADQNFFHKVDEKTAIVIGKVVVTKNPCLHPGDVRVLEAVYEAELED 805

Query: 1110 -GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
             G VDCLVFPQKGERPHPNECSGGDLDGD +F+ WD++LIP  TD PMDY   R RI DH
Sbjct: 806  KGLVDCLVFPQKGERPHPNECSGGDLDGDQFFISWDKDLIPCQTDAPMDYTGSRPRIMDH 865

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
            +VTLEEIQKFFVDYMIND LG+ISTAHLVHADREP KARS KCL+LATLHSMAVDFAKTG
Sbjct: 866  EVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPDKARSEKCLELATLHSMAVDFAKTG 925

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            APAE PR+L+P+E+PDFM+R D+ MY S GVLGKLYRAT++ T  +    +WS+++A+A 
Sbjct: 926  APAEMPRSLKPREFPDFMQRVDKPMYASLGVLGKLYRATINSTVQERSKFVWSKKMAEAL 985

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YDHDL V+GFE+ L+ A+++K +Y EK++ LMNYY  ESE EI+TGN+RN++ +L+RD +
Sbjct: 986  YDHDLEVNGFEAFLSTAQTHKDMYEEKMSFLMNYYEVESEDEILTGNMRNKATFLQRDNR 1045

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKA-LSF 217
            +Y ++KDRIL+S+K+LQ EA+  F++SC+ G+  ++ASAWYHVTYH +YC + +K+ LSF
Sbjct: 1046 RYGDMKDRILLSMKNLQREARERFENSCKVGEHQRLASAWYHVTYHPNYCQESMKSCLSF 1105

Query: 216  AWIVGDRLLDIKSLNRRRIEQ 154
             WIVGD LL IKS+N R I++
Sbjct: 1106 PWIVGDILLKIKSVNSREIQR 1126


>ref|XP_012080102.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X2 [Jatropha
            curcas]
          Length = 940

 Score =  999 bits (2583), Expect = 0.0
 Identities = 483/737 (65%), Positives = 599/737 (81%), Gaps = 4/737 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            ITP+KIY LGPE+E++NYVVK++A +ASDFMRVTFVEEDWSKLP +AIST+I  G+F+KP
Sbjct: 201  ITPSKIYCLGPELESSNYVVKNFASYASDFMRVTFVEEDWSKLPVNAISTSIQHGIFAKP 260

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +Y RILS+LR+GI IG KRFEFLAFSASQLRS+SVWMFASND VK EDIR+WMGCF
Sbjct: 261  FRTKIYERILSVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFASNDNVKAEDIRQWMGCF 320

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
             +  ++SKCAARMGQLFS+S+QTF+V   DV  I DIEVT+DG+ YCFSDGIGKIS + A
Sbjct: 321  NKIRSISKCAARMGQLFSASKQTFVVPAEDVEIIPDIEVTSDGIGYCFSDGIGKISLSFA 380

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            +QVA+KCGLN  PSAFQIRYGG+KGVIAVD  S +KLSLR SM KF S+NRMLN+T W++
Sbjct: 381  QQVAQKCGLNHTPSAFQIRYGGFKGVIAVDRNSLRKLSLRSSMLKFESENRMLNVTKWSD 440

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEMG--DVKSI 1468
             +PCYLNRE+V+LLSTLG++DE F+ + ++Q+HLL  ML ++EAAL+VLE +   D ++I
Sbjct: 441  SMPCYLNREIVTLLSTLGVKDEIFQGLQQQQLHLLGRMLNDREAALDVLENLAWVDSRNI 500

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            +VKMLLQGY+PN EPYL++ML+AY    L ++RS+ R+FVPKGR+L+GCLDE GILDYGQ
Sbjct: 501  MVKMLLQGYKPNVEPYLSMMLQAYHENLLVELRSRCRVFVPKGRILIGCLDEEGILDYGQ 560

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE- 1111
            +YVRVT++++ELQ   Q+FF+K              TKNPCLHPGD+RVLEAVYE  LE 
Sbjct: 561  IYVRVTLSKSELQNADQSFFRKVDETTSIVTGKVVVTKNPCLHPGDVRVLEAVYEVGLEE 620

Query: 1110 -GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
             G VDC++FPQKGERPHPNECSGGDLDGDL+F+ WDE+LIP  T++PMDY+ RR RI DH
Sbjct: 621  KGLVDCILFPQKGERPHPNECSGGDLDGDLFFISWDEDLIPSQTESPMDYLGRRPRIMDH 680

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
            DV LEEI KFFVDYMIND LG+ISTAHLVHADREP KARS KCL+LA LHSMAVDFAKTG
Sbjct: 681  DVKLEEIHKFFVDYMINDTLGAISTAHLVHADREPDKARSRKCLKLAELHSMAVDFAKTG 740

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            APAE PRAL+PKE+PDFMER D++ Y+S  VLGKLYR TLD T       IWSE++A+A 
Sbjct: 741  APAEMPRALKPKEFPDFMERFDKSTYISDAVLGKLYRGTLDSTLQGRTKFIWSEKIAEAT 800

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YD +L V+GF   +  A ++K +Y+EKL+ LMNYY A++E E++TGNLRN++MYL+RD +
Sbjct: 801  YDCNLEVEGFMEFIDIAANHKYMYMEKLSGLMNYYEAKNEDEMLTGNLRNKAMYLQRDNR 860

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            +Y + KDRIL+S+K LQ EAK WF+SSC    +  +ASAWYHVT H +Y  + I  L F 
Sbjct: 861  RYGDTKDRILLSMKSLQKEAKEWFESSCRPSTQQCLASAWYHVTCHPNYFQEGITCLGFP 920

Query: 213  WIVGDRLLDIKSLNRRR 163
            WIVGD LL+IK+ + ++
Sbjct: 921  WIVGDILLNIKTASNKK 937


>ref|XP_012080101.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X1 [Jatropha
            curcas] gi|643720862|gb|KDP31126.1| hypothetical protein
            JCGZ_11502 [Jatropha curcas]
          Length = 1122

 Score =  999 bits (2583), Expect = 0.0
 Identities = 483/737 (65%), Positives = 599/737 (81%), Gaps = 4/737 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            ITP+KIY LGPE+E++NYVVK++A +ASDFMRVTFVEEDWSKLP +AIST+I  G+F+KP
Sbjct: 383  ITPSKIYCLGPELESSNYVVKNFASYASDFMRVTFVEEDWSKLPVNAISTSIQHGIFAKP 442

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +Y RILS+LR+GI IG KRFEFLAFSASQLRS+SVWMFASND VK EDIR+WMGCF
Sbjct: 443  FRTKIYERILSVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFASNDNVKAEDIRQWMGCF 502

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
             +  ++SKCAARMGQLFS+S+QTF+V   DV  I DIEVT+DG+ YCFSDGIGKIS + A
Sbjct: 503  NKIRSISKCAARMGQLFSASKQTFVVPAEDVEIIPDIEVTSDGIGYCFSDGIGKISLSFA 562

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            +QVA+KCGLN  PSAFQIRYGG+KGVIAVD  S +KLSLR SM KF S+NRMLN+T W++
Sbjct: 563  QQVAQKCGLNHTPSAFQIRYGGFKGVIAVDRNSLRKLSLRSSMLKFESENRMLNVTKWSD 622

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEMG--DVKSI 1468
             +PCYLNRE+V+LLSTLG++DE F+ + ++Q+HLL  ML ++EAAL+VLE +   D ++I
Sbjct: 623  SMPCYLNREIVTLLSTLGVKDEIFQGLQQQQLHLLGRMLNDREAALDVLENLAWVDSRNI 682

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            +VKMLLQGY+PN EPYL++ML+AY    L ++RS+ R+FVPKGR+L+GCLDE GILDYGQ
Sbjct: 683  MVKMLLQGYKPNVEPYLSMMLQAYHENLLVELRSRCRVFVPKGRILIGCLDEEGILDYGQ 742

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE- 1111
            +YVRVT++++ELQ   Q+FF+K              TKNPCLHPGD+RVLEAVYE  LE 
Sbjct: 743  IYVRVTLSKSELQNADQSFFRKVDETTSIVTGKVVVTKNPCLHPGDVRVLEAVYEVGLEE 802

Query: 1110 -GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
             G VDC++FPQKGERPHPNECSGGDLDGDL+F+ WDE+LIP  T++PMDY+ RR RI DH
Sbjct: 803  KGLVDCILFPQKGERPHPNECSGGDLDGDLFFISWDEDLIPSQTESPMDYLGRRPRIMDH 862

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
            DV LEEI KFFVDYMIND LG+ISTAHLVHADREP KARS KCL+LA LHSMAVDFAKTG
Sbjct: 863  DVKLEEIHKFFVDYMINDTLGAISTAHLVHADREPDKARSRKCLKLAELHSMAVDFAKTG 922

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            APAE PRAL+PKE+PDFMER D++ Y+S  VLGKLYR TLD T       IWSE++A+A 
Sbjct: 923  APAEMPRALKPKEFPDFMERFDKSTYISDAVLGKLYRGTLDSTLQGRTKFIWSEKIAEAT 982

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YD +L V+GF   +  A ++K +Y+EKL+ LMNYY A++E E++TGNLRN++MYL+RD +
Sbjct: 983  YDCNLEVEGFMEFIDIAANHKYMYMEKLSGLMNYYEAKNEDEMLTGNLRNKAMYLQRDNR 1042

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            +Y + KDRIL+S+K LQ EAK WF+SSC    +  +ASAWYHVT H +Y  + I  L F 
Sbjct: 1043 RYGDTKDRILLSMKSLQKEAKEWFESSCRPSTQQCLASAWYHVTCHPNYFQEGITCLGFP 1102

Query: 213  WIVGDRLLDIKSLNRRR 163
            WIVGD LL+IK+ + ++
Sbjct: 1103 WIVGDILLNIKTASNKK 1119


>emb|CDP19325.1| unnamed protein product [Coffea canephora]
          Length = 1120

 Score =  999 bits (2582), Expect = 0.0
 Identities = 480/738 (65%), Positives = 594/738 (80%), Gaps = 4/738 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            +TP+K+Y LGPE+ET+NY+VK++A +ASDF+RVTFVEEDW KL    ++T+ G+GLF+K 
Sbjct: 381  VTPSKVYCLGPELETSNYIVKNFASYASDFLRVTFVEEDWGKLSPSVVNTSFGRGLFAKN 440

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             +T +YHRILSIL++GI IG KRF FLAFSASQLRS+SVWMFASN+ ++ EDIR+WMGCF
Sbjct: 441  YKTNIYHRILSILKDGIVIGEKRFLFLAFSASQLRSNSVWMFASNENLRAEDIRDWMGCF 500

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
             +  +VSKCAARMGQLFSSS QT  V P+ V  I DIE+T DG N+CFSDGIGKIS   A
Sbjct: 501  NKIRSVSKCAARMGQLFSSSLQTLEVPPQQVEVIPDIEMTTDGENHCFSDGIGKISQGFA 560

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            +QVA+KCGLN  PSAFQIRYGGYKGVIAVD  S++KLSLR SM KF S NRMLN+T W+E
Sbjct: 561  RQVAQKCGLNYTPSAFQIRYGGYKGVIAVDRYSFRKLSLRSSMLKFESKNRMLNVTKWSE 620

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEMG--DVKSI 1468
             +PCYLNRE+++LLSTLG++D+ F AM  EQ+HLL++MLT++EAAL+VL  MG  + KSI
Sbjct: 621  AMPCYLNREIITLLSTLGVEDQVFLAMQYEQLHLLDKMLTHREAALDVLASMGVNETKSI 680

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            +V+ML QG+EP  EPYL+++L+++R  QLSD+RS+ RIFVPKGRVL+GCLDETGILDYGQ
Sbjct: 681  VVRMLRQGFEPEIEPYLSMILQSHRENQLSDLRSRCRIFVPKGRVLLGCLDETGILDYGQ 740

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE- 1111
            VY+R+TMT+ ELQ G Q FF+K              TKNPCLHPGD+RVLEAVYE +L+ 
Sbjct: 741  VYIRITMTKTELQIGEQCFFQKVDETTAIVKGKVVVTKNPCLHPGDVRVLEAVYEFSLQE 800

Query: 1110 -GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
             G VDC++FP KG RPHPNECSGGDLDGDLYFV WDENLIP  T TPMDYI RR RI DH
Sbjct: 801  RGMVDCILFPLKGVRPHPNECSGGDLDGDLYFVSWDENLIPFQTVTPMDYIDRRKRIVDH 860

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
            DVTLEEIQ FFV YMI+D LG+ISTAHL+HADREP KA SPKCLQLATLHSMAVDFAKTG
Sbjct: 861  DVTLEEIQSFFVGYMISDTLGTISTAHLIHADREPDKALSPKCLQLATLHSMAVDFAKTG 920

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
             PAE PR L+P+E+PDFMER D+ MY S G LGKLYRAT+          ++S ++ Q A
Sbjct: 921  TPAEMPRFLKPREFPDFMERWDKPMYTSQGALGKLYRATIASRVPGKSSFVFSAKIVQDA 980

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YD +L++DG+E  L  A+ +K +Y++K++ L+ YYGAE+E EI+TGNLRN+SMYL+RD +
Sbjct: 981  YDDELLIDGYEYFLGTAQCHKEMYVDKISTLLTYYGAETEEEILTGNLRNKSMYLQRDNR 1040

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            +Y E+KDRIL+++K LQ EA+ WF+SSC   ++ ++ASAWYHVTYH +Y     K L F 
Sbjct: 1041 RYFELKDRILVAIKSLQKEARSWFESSCRAAEQMKLASAWYHVTYHPTYSEGSAKCLGFP 1100

Query: 213  WIVGDRLLDIKSLNRRRI 160
            WIVGD LLDIKS+N R++
Sbjct: 1101 WIVGDILLDIKSMNSRKV 1118


>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
          Length = 1119

 Score =  997 bits (2578), Expect = 0.0
 Identities = 482/737 (65%), Positives = 590/737 (80%), Gaps = 4/737 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            +TP+KIY LGPE+ET+NY+VK++A+HASDF+RVTFVEEDW KL  +A+S ++ QG+F+KP
Sbjct: 380  VTPSKIYCLGPELETSNYIVKNFAEHASDFLRVTFVEEDWGKLFPNAVSMSVEQGIFAKP 439

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +YHRILSILR GI IG KRF FLAFSASQLRS+SVWMFASN+ VK EDIREWMGCF
Sbjct: 440  YRTKIYHRILSILREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCF 499

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
             +  ++SKCAARMGQLFS+S QT  V+ + V  + DIEVT+DGV+YCFSDGIGKIS A A
Sbjct: 500  NKIRSISKCAARMGQLFSTSVQTMEVQLQHVEILPDIEVTSDGVSYCFSDGIGKISQAFA 559

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            +QVA+KCGLN  PSAFQIRYGGYKGVIAVD  S++KLSLR SM KF S NRMLNIT W++
Sbjct: 560  RQVAQKCGLNHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSD 619

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEMG--DVKSI 1468
             +PCYLNRE+V LLSTLG++D+  E +L   + LL +MLT  EAAL+VLE MG  DVK I
Sbjct: 620  AMPCYLNREIVILLSTLGVEDKALEDLLDNHLRLLGKMLTTNEAALDVLESMGGGDVKKI 679

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            L++MLLQGY PN+EPYL++ML+++   Q+SD+RS+ RIF+PKGR+L+GCLDETGIL YG+
Sbjct: 680  LMRMLLQGYAPNREPYLSMMLQSHFENQISDLRSRCRIFIPKGRILVGCLDETGILKYGE 739

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLEG 1108
            VYVR+TMT+AELQ G Q FF+K              TKNPCLHPGD+RVLEAVYE TLE 
Sbjct: 740  VYVRITMTKAELQNGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRVLEAVYEVTLEE 799

Query: 1107 --FVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
              +VDC++FPQ GERPHPNECSGGDLDGDLYF+CWDE+LIP  T TPMDY  RR RI DH
Sbjct: 800  KTWVDCIIFPQNGERPHPNECSGGDLDGDLYFICWDESLIPHQTVTPMDYTGRRPRIMDH 859

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
            +VTLEEIQ+FFVDYMI+D LG+ISTAHLVHADREP KA + KCLQLATLHSMAVDFAKTG
Sbjct: 860  EVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNSKCLQLATLHSMAVDFAKTG 919

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            A AE PR L+P+E+PDFMER D+ MY+S GVLGKLYR  +     +  D + ++   Q A
Sbjct: 920  AAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGVIKSYIRRNSDDLSTDRAIQDA 979

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YDHDL+V+G+E+ +  A+++K +Y++ +N L+NYYGAE EVEI+TGNLR +S+YL+RD +
Sbjct: 980  YDHDLLVEGYEAFIETAKTHKEMYLDSMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNR 1039

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            +Y E+KDRIL+S K L  E KGWF   C E    ++ SAWYHVTYH SYC +    L F 
Sbjct: 1040 RYFELKDRILVSAKSLHKEVKGWFSGCCTEDDHQKLVSAWYHVTYHPSYCHESANCLGFP 1099

Query: 213  WIVGDRLLDIKSLNRRR 163
            W+VGD LL+IKS N R+
Sbjct: 1100 WVVGDILLNIKSHNTRK 1116


>ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana sylvestris]
          Length = 1120

 Score =  996 bits (2574), Expect = 0.0
 Identities = 484/738 (65%), Positives = 591/738 (80%), Gaps = 4/738 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            +TP+K+Y LGPE+ET+NY+VK++A HASDF+RVTFVEEDWSKL  +AIS ++ QG+F+KP
Sbjct: 381  VTPSKVYCLGPELETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKP 440

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +YHRILSILR+G++IG K+F FLAFSASQLRS+SVWMFASN+ VK EDIREWMGCF
Sbjct: 441  YRTKIYHRILSILRDGLDIGTKKFLFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCF 500

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
             +  +VSKCAARMGQLFS+S QT  V+   V  + DIEVT+DGV+YCFSDGIGKIS A A
Sbjct: 501  NKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEILPDIEVTSDGVSYCFSDGIGKISQAFA 560

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
             QVA+KCGL+  PSAFQIRYGGYKGVIAVD  S++KLSLR SM KF S NRMLNIT W++
Sbjct: 561  SQVAQKCGLSYTPSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSD 620

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEMG--DVKSI 1468
             +PCYLNRE+V LLSTLG++D+  E +L   +HLL +MLT  EAAL+VLE +G  DVK I
Sbjct: 621  AMPCYLNREIVILLSTLGVEDKVLEDLLDNHLHLLGKMLTTNEAALDVLESIGGGDVKRI 680

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            L++ML QGY PN EPYL++ML+++   QLSD+RS+ RIF+PKGRVL+GCLDETGIL+YGQ
Sbjct: 681  LMRMLHQGYAPNLEPYLSMMLQSHFENQLSDLRSRCRIFIPKGRVLVGCLDETGILNYGQ 740

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE- 1111
            VY R+TMT+AELQ G Q FF++              TKNPCLHPGD+RVLEAVYE  LE 
Sbjct: 741  VYARITMTKAELQSGQQNFFQQVDETTAVVRGKVVVTKNPCLHPGDVRVLEAVYEVALEE 800

Query: 1110 -GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
              +VDC++FPQKGERPHPNECSGGDLDGDLYF+ W ENLIP  T TPMDY  RR RI DH
Sbjct: 801  KAWVDCIIFPQKGERPHPNECSGGDLDGDLYFISWAENLIPRQTVTPMDYTGRRPRIMDH 860

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
            +VTLEEIQ+FFVDYMI+D LG+ISTAHLVHADREP KA +PKCLQLATLHSMAVDFAKTG
Sbjct: 861  EVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTG 920

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            A AE PR L+P+E+PDF+ER D+ MY+S GVLGKLYRA +  +     D + S    Q A
Sbjct: 921  AAAEMPRFLKPREFPDFLERWDKPMYISEGVLGKLYRAIVKSSVRGNSDDLGSVRAIQDA 980

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YDHDL+ +G+E+ +  A+++K +Y++++N L+NYYGAE EVEI+TGNLR +S+YL+RD +
Sbjct: 981  YDHDLLFEGYEAFIETAKNHKEMYLDRMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNR 1040

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            +Y E+KDRIL+S K LQ E KGWF   C+E +  ++ASAWYHVTYH SYC      L F 
Sbjct: 1041 RYFELKDRILVSAKSLQKEVKGWFTGYCKEDEHKKLASAWYHVTYHPSYCEGSANCLGFP 1100

Query: 213  WIVGDRLLDIKSLNRRRI 160
            W+VGD LLDIK  N R+I
Sbjct: 1101 WVVGDILLDIKLHNTRKI 1118


>ref|XP_010913557.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Elaeis
            guineensis]
          Length = 1117

 Score =  995 bits (2573), Expect = 0.0
 Identities = 496/732 (67%), Positives = 585/732 (79%), Gaps = 4/732 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            +TP+K+Y LGPE+ET+NYV++HY+++ASDF+RV+FVEEDW KL  DAIST+I QG+FSKP
Sbjct: 374  VTPSKVYFLGPELETSNYVIRHYSEYASDFIRVSFVEEDWGKLSFDAISTSIEQGVFSKP 433

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +Y+RILSIL++GI IG K+FEFL FSASQLRS+S+WMFASND V  E IREWMG F
Sbjct: 434  YRTGIYNRILSILKDGIVIGSKKFEFLVFSASQLRSNSIWMFASNDKVTAESIREWMGHF 493

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
             +  +VSKCAARMGQLFSSS QT  V  RDV  I DI VT DG+ YCFSDGIGKIS + A
Sbjct: 494  NKIHSVSKCAARMGQLFSSSLQTIDVPFRDVKKISDITVTTDGIPYCFSDGIGKISLSFA 553

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            +QVA+KCGL+  PSAFQIRYGGYKGVIAVD  S++KLSLR SM KF S+N ML +T W+E
Sbjct: 554  RQVAQKCGLSHTPSAFQIRYGGYKGVIAVDRTSFQKLSLRPSMLKFESENTMLCVTKWSE 613

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEMG--DVKSI 1468
             LPCYLNRE++ LLSTLG++DE FE M  +Q+ LL+EMLTN+E  L +L++M   D +++
Sbjct: 614  YLPCYLNREIICLLSTLGVEDEVFELMQHDQMSLLDEMLTNREITLRMLDKMAFPDARTV 673

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
             VKML+QGYEPN EPYL +ML+AYR YQLSDIRSK RIFVPKGRVL+GCLDETG LDYGQ
Sbjct: 674  -VKMLMQGYEPNSEPYLLMMLKAYREYQLSDIRSKCRIFVPKGRVLLGCLDETGSLDYGQ 732

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE- 1111
            VYV++TMT+ ELQ   QTFF K              T+NPCLHPGD+RVL+AVY P L+ 
Sbjct: 733  VYVKITMTKEELQDTNQTFFDKVDQTAAAVIQKVVVTRNPCLHPGDVRVLQAVYNPQLDN 792

Query: 1110 -GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
             G VDC+VFPQ+G RPHP+ECSGGDLDGDLYFVCWDE LIP  TDTPMDY ARR R TDH
Sbjct: 793  MGLVDCIVFPQRGRRPHPSECSGGDLDGDLYFVCWDEKLIPPKTDTPMDYYARRQRHTDH 852

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
            DVTLEEIQKFFVDYMIND LG ISTAHLV+ADREP KARSPKCLQLA LHSMAVDFAKTG
Sbjct: 853  DVTLEEIQKFFVDYMINDTLGVISTAHLVYADREPAKARSPKCLQLANLHSMAVDFAKTG 912

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            + AE PR LRPKE+PDFMER DR MYVS G+LGKLYR+     E    DL+ +E + Q+A
Sbjct: 913  SSAEMPRILRPKEFPDFMERWDRPMYVSTGILGKLYRSASSHIERPNTDLMDAEMLPQSA 972

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YD+DL V GFE+ L  AE Y+ +Y E+L+ LMNYYGAE E EI+TGNLR+RSMYL+RD+K
Sbjct: 973  YDYDLQVSGFEAFLEVAEDYRNMYSERLSSLMNYYGAEHEDEILTGNLRSRSMYLQRDKK 1032

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            KY E+KDRIL+ VK L  E +GWF  SC E +  +MASAWYHVTYH SY  +  + LSF 
Sbjct: 1033 KYGEMKDRILLGVKSLHKEVQGWFKRSCAESESLRMASAWYHVTYHPSYYSEN-RFLSFP 1091

Query: 213  WIVGDRLLDIKS 178
            WI+ D LL IK+
Sbjct: 1092 WILSDALLSIKA 1103


>ref|XP_008453109.1| PREDICTED: RNA-dependent RNA polymerase 2 [Cucumis melo]
          Length = 1117

 Score =  994 bits (2569), Expect = 0.0
 Identities = 482/737 (65%), Positives = 592/737 (80%), Gaps = 4/737 (0%)
 Frame = -2

Query: 2361 ITPTKIYLLGPEVETANYVVKHYAKHASDFMRVTFVEEDWSKLPSDAISTTIGQGLFSKP 2182
            +TP++IY LGPE+ET+NYVVK+++ +ASDFMRVTFVEEDWSKLP+ A++T+I +G+ SKP
Sbjct: 378  VTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAGAVTTSIQRGILSKP 437

Query: 2181 SRTPLYHRILSILRNGIEIGHKRFEFLAFSASQLRSSSVWMFASNDTVKTEDIREWMGCF 2002
             RT +YHRI++ILR+GI IG KRFEFLAFSASQLRS+SVWMFAS+D +K E+IR+WMGCF
Sbjct: 438  YRTNIYHRIVTILRDGIVIGAKRFEFLAFSASQLRSNSVWMFASSDNLKAEEIRQWMGCF 497

Query: 2001 KQFDNVSKCAARMGQLFSSSQQTFIVRPRDVASIHDIEVTNDGVNYCFSDGIGKISPALA 1822
            ++  ++SKCAARMGQLFSSS QT +V  +DV  I DIEV +DG++YCFSDGIGKIS + A
Sbjct: 498  EKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDGIDYCFSDGIGKISLSFA 557

Query: 1821 KQVAEKCGLNKIPSAFQIRYGGYKGVIAVDHKSYKKLSLRKSMKKFTSDNRMLNITSWTE 1642
            +QVA+KCG+N IPSAFQIRYGGYKGVIAVD  S++KLSLR SM KF S N+MLN+T   +
Sbjct: 558  RQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMLKFESKNKMLNVTKCCD 617

Query: 1641 PLPCYLNREVVSLLSTLGIQDEKFEAMLREQIHLLNEMLTNKEAALNVLEEM--GDVKSI 1468
             +PCYLNRE+V+LLSTLG++DE FEA+ +EQ+HLL  MLT+K  ALNVLE +   D  +I
Sbjct: 618  SMPCYLNREIVTLLSTLGVKDESFEALQQEQLHLLKRMLTDKAVALNVLENLHGADSNNI 677

Query: 1467 LVKMLLQGYEPNKEPYLNIMLRAYRAYQLSDIRSKSRIFVPKGRVLMGCLDETGILDYGQ 1288
            LV+ML  GYEPN EPYL++ML+A+     SD+RS+ RIFVPKGR+L+GCLDETGIL+YGQ
Sbjct: 678  LVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDETGILNYGQ 737

Query: 1287 VYVRVTMTRAELQCGTQTFFKKXXXXXXXXXXXXXXTKNPCLHPGDIRVLEAVYEPTLE- 1111
            VY  +T+T++ELQ   Q +F                TKNPCLHPGD+RVLEA++   LE 
Sbjct: 738  VYACITLTKSELQNRNQNYFHTIDETKSILIGKVVVTKNPCLHPGDVRVLEAIFHVELEE 797

Query: 1110 -GFVDCLVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPMHTDTPMDYIARRARITDH 934
             G VDCL+FPQKG RPH NECSGGDLDGDLYF+ WDENLIP  T+ PMDY  RR RI DH
Sbjct: 798  KGLVDCLIFPQKGPRPHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPRIMDH 857

Query: 933  DVTLEEIQKFFVDYMINDNLGSISTAHLVHADREPKKARSPKCLQLATLHSMAVDFAKTG 754
            DVTLEEIQKFFVDYMIND LG+ISTAHLVHADREPKKA S KCL+LA LHSMAVDFAKTG
Sbjct: 858  DVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKCLELAALHSMAVDFAKTG 917

Query: 753  APAEFPRALRPKEYPDFMEREDRAMYVSPGVLGKLYRATLDPTEDQTPDLIWSEEVAQAA 574
            APAE PR L+P+E+PDFMER D+ MY+S  VLGKLYRA +   E +   L+WSEE A+A 
Sbjct: 918  APAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAIKSIEQERSRLVWSEEAARAI 977

Query: 573  YDHDLVVDGFESLLARAESYKLLYIEKLNVLMNYYGAESEVEIMTGNLRNRSMYLERDRK 394
            YDHDL VDGFE+ L  AE+YK +YIEK+++LMNYYGAE E EI+ G+LR+R+ YL+RD +
Sbjct: 978  YDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEILMGDLRSRASYLQRDNR 1037

Query: 393  KYREVKDRILISVKDLQNEAKGWFDSSCEEGKRNQMASAWYHVTYHRSYCLDPIKALSFA 214
            KY ++KDRIL+SVK L+ E K WF++SC+  +R  MASAWYHVTYH SY  + +   SF 
Sbjct: 1038 KYGDMKDRILLSVKSLRKEVKEWFENSCDPHQRRMMASAWYHVTYHPSYFKEDMFYFSFP 1097

Query: 213  WIVGDRLLDIKSLNRRR 163
            W V D LL+IK+ N +R
Sbjct: 1098 WAVSDVLLNIKATNSKR 1114