BLASTX nr result
ID: Aconitum23_contig00008368
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00008368
(1974 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010246764.1| PREDICTED: regulator of nonsense transcripts... 256 e-111
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr... 250 e-106
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts... 250 e-106
ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts... 251 e-104
ref|XP_010657968.1| PREDICTED: regulator of nonsense transcripts... 251 e-104
ref|XP_010657969.1| PREDICTED: regulator of nonsense transcripts... 251 e-104
ref|XP_012066695.1| PREDICTED: regulator of nonsense transcripts... 241 2e-99
ref|XP_012066696.1| PREDICTED: regulator of nonsense transcripts... 241 2e-99
ref|XP_011092289.1| PREDICTED: regulator of nonsense transcripts... 237 2e-96
ref|XP_010930556.1| PREDICTED: regulator of nonsense transcripts... 225 1e-94
ref|XP_010930557.1| PREDICTED: regulator of nonsense transcripts... 225 1e-94
ref|XP_010930558.1| PREDICTED: regulator of nonsense transcripts... 225 1e-94
ref|XP_007041200.1| Smg-4/UPF3 family protein, putative isoform ... 238 1e-93
ref|XP_006598794.1| PREDICTED: regulator of nonsense transcripts... 229 3e-92
ref|XP_004485449.1| PREDICTED: regulator of nonsense transcripts... 235 1e-90
ref|XP_008786472.1| PREDICTED: regulator of nonsense transcripts... 223 2e-90
ref|XP_010912655.1| PREDICTED: regulator of nonsense transcripts... 218 7e-89
ref|XP_012436522.1| PREDICTED: regulator of nonsense transcripts... 239 7e-89
gb|KJB47856.1| hypothetical protein B456_008G045900 [Gossypium r... 239 7e-89
ref|XP_008786471.1| PREDICTED: regulator of nonsense transcripts... 223 2e-88
>ref|XP_010246764.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X5 [Nelumbo
nucifera]
Length = 575
Score = 256 bits (653), Expect(2) = e-111
Identities = 127/192 (66%), Positives = 152/192 (79%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
DF+RPEDV+EFAEFFDGH+FVNEKG+Q K +VEYAPSQRV KSW KKDGREGTI KD EY
Sbjct: 59 DFKRPEDVIEFAEFFDGHIFVNEKGSQFKTIVEYAPSQRVAKSWSKKDGREGTIFKDPEY 118
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
LEFL+L++KPVENLPSAE+QLE+REAER GA KE I+TPLMDF+RQKRAAKGG QR S
Sbjct: 119 LEFLDLISKPVENLPSAEVQLERREAERAGAAKEVPIVTPLMDFVRQKRAAKGGSQRSLS 178
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYISASDKSN 1433
NGKL+RRA G SPG+S S+S+K+GSEKRR STS+YV RD TYI + +
Sbjct: 179 NGKLSRRATGTSPGSSGSSSTKRGSEKRRVSTSMYVLRDSVKNTSGKDKSTYILVPRRED 238
Query: 1432 SPNTEVAADMIM 1397
T+ + +++
Sbjct: 239 QELTDKSVSLVI 250
Score = 176 bits (447), Expect(2) = e-111
Identities = 130/295 (44%), Positives = 167/295 (56%), Gaps = 49/295 (16%)
Frame = -2
Query: 1325 IRNSQRREVGGGVIRSILSNKEARQSQSSKVVHTEPQIQT--LEKEKKPPRSTNIPSILK 1152
I NSQRR+V G +IRSILS KEARQ QS+ + ++ Q QT LEKEK+PPR T + S+LK
Sbjct: 283 IPNSQRRDVSGRMIRSILS-KEARQGQSTTAIQSDQQSQTMNLEKEKRPPRPTTMRSVLK 341
Query: 1151 NHLSSFSVAAFNSDGDVKRIAD---VGGESQGSGSINEKQDKRTRNKDRPDRSVWSH-RR 984
+HLSS S AA + D ++KRI D + G S+NEKQ+KR RNKDRPDR VW+ RR
Sbjct: 342 DHLSSISQAASSCDTEMKRIQDDKVAVNDVHGVSSVNEKQEKRARNKDRPDRGVWTPLRR 401
Query: 983 SNGSH--------XXXXXXXXXXXXXXXXXTHQSHPPGVGK-GENTTDS----------G 861
S+ SH +Q PG GK G++ D
Sbjct: 402 SDISHASDDSSSSSFSGPTQVLSDSLEGMTINQLVAPGAGKLGDDVLDEPESGNKSFFPS 461
Query: 860 GKHRS-------------------FMSSQLDIKTDVPNSTRSVEVRTVGSIRSG-SSLEN 741
GK RS + S ++K+++ ++++ EV+T+GS RS SS EN
Sbjct: 462 GKARSQEASVHNSRVGRGGNVSSAYDSCSHEVKSEIHHASKG-EVKTIGSGRSNFSSAEN 520
Query: 740 GAYRH-GRRGIAH-MKD-DGSSY-VSDGKLPKRGGATGYGPHEKQVWVQKSGSGT 588
G++R RRG H KD DG+S SDGK KRG ATGYG HEKQVWVQK GSG+
Sbjct: 521 GSHRQFSRRGSVHGGKDIDGNSLSTSDGKPSKRGNATGYGSHEKQVWVQKLGSGS 575
>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
gi|557533707|gb|ESR44825.1| hypothetical protein
CICLE_v10000901mg [Citrus clementina]
Length = 514
Score = 250 bits (639), Expect(2) = e-106
Identities = 127/203 (62%), Positives = 156/203 (76%), Gaps = 7/203 (3%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
DF++PEDV+EFAEFF+GHVFVNEKG Q K +VEYAPSQRVPK W KKDGREGT+LKD EY
Sbjct: 59 DFKKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEY 118
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
LEFLE ++KPVENLPSAEIQLE+REAER GA KE LI+TPLMDF+RQKRAAK G +RL S
Sbjct: 119 LEFLEFISKPVENLPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLS 178
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYISAS---- 1445
NGKL+RRA G+S G+ S SSK+GS+K++ ST++YV RD TYI
Sbjct: 179 NGKLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDD 238
Query: 1444 ---DKSNSPNTEVAADMIMDESG 1385
DK S ++ ++++++ESG
Sbjct: 239 QDFDKPVSSSSATGSEVVLEESG 261
Score = 166 bits (420), Expect(2) = e-106
Identities = 108/262 (41%), Positives = 144/262 (54%), Gaps = 6/262 (2%)
Frame = -2
Query: 1355 SVRNSAGYPAIRNSQRREVGGGVIRSILSNKEARQSQSSKVVHTEPQIQTLEKEKKPPRS 1176
SV+ PA++ +QRRE G +IR IL NK+ARQ+Q+S + H+E QI LEK+K+PPR
Sbjct: 297 SVKTIISSPALKQNQRRENSGRIIRGILLNKDARQNQASGL-HSEQQISNLEKDKRPPRP 355
Query: 1175 TNIPSILKNHLSSFSVAAFNSDGDVKRIADVGGESQGSGSIN----EKQDKRTRNKDRPD 1008
+++ ++K D G S +N EKQ++RTRNKDRPD
Sbjct: 356 SHVQLVMK---------------------DTNGVSDDKVIVNDLHSEKQERRTRNKDRPD 394
Query: 1007 RSVWSHRRSNGSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKGENTTDSGGKHRSFMSSQL 828
R+ W+ RRS+GS+ Q V E G
Sbjct: 395 RAAWTLRRSDGSY--------QSDESLSSSASQLSLSAVDSSEGNLGDG----------- 435
Query: 827 DIKTDVPNSTRSVEVRTVGSIRSG-SSLENGAYRH-GRRGIAHMKDDGSSYVSDGKLPKR 654
K D+ N RS EV+ VG RS SS++NG++RH GRRG H+KDDGS +S+GK +R
Sbjct: 436 --KFDLSN-MRSGEVKAVGGGRSSHSSVDNGSHRHIGRRGPTHVKDDGSPVMSEGKPLRR 492
Query: 653 GGATGYGPHEKQVWVQKSGSGT 588
GGA+GYG HEKQVWVQKS SG+
Sbjct: 493 GGASGYGSHEKQVWVQKSSSGS 514
>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
sinensis]
Length = 514
Score = 250 bits (639), Expect(2) = e-106
Identities = 127/203 (62%), Positives = 156/203 (76%), Gaps = 7/203 (3%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
DF++PEDV+EFAEFF+GHVFVNEKG Q K +VEYAPSQRVPK W KKDGREGT+LKD EY
Sbjct: 59 DFKKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEY 118
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
LEFLE ++KPVENLPSAEIQLE+REAER GA KE LI+TPLMDF+RQKRAAK G +RL S
Sbjct: 119 LEFLEFISKPVENLPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLS 178
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYISAS---- 1445
NGKL+RRA G+S G+ S SSK+GS+K++ ST++YV RD TYI
Sbjct: 179 NGKLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDD 238
Query: 1444 ---DKSNSPNTEVAADMIMDESG 1385
DK S ++ ++++++ESG
Sbjct: 239 QDFDKPVSSSSATGSEVVLEESG 261
Score = 166 bits (419), Expect(2) = e-106
Identities = 108/262 (41%), Positives = 144/262 (54%), Gaps = 6/262 (2%)
Frame = -2
Query: 1355 SVRNSAGYPAIRNSQRREVGGGVIRSILSNKEARQSQSSKVVHTEPQIQTLEKEKKPPRS 1176
SV+N PA++ +QRRE G +IR IL NK+ARQ+Q+S + H+E QI LEK+K+PPR
Sbjct: 297 SVKNIISSPALKQNQRRENSGRIIRGILLNKDARQNQASGL-HSEQQISNLEKDKRPPRP 355
Query: 1175 TNIPSILKNHLSSFSVAAFNSDGDVKRIADVGGESQGSGSIN----EKQDKRTRNKDRPD 1008
+++ ++K D G S +N EKQ++RTRNKDRPD
Sbjct: 356 SHVHLVMK---------------------DTNGVSDDKVIVNDLHSEKQERRTRNKDRPD 394
Query: 1007 RSVWSHRRSNGSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKGENTTDSGGKHRSFMSSQL 828
R+ W+ RRS+GS+ Q V E G
Sbjct: 395 RAAWTLRRSDGSY--------QSDESLSSSASQLSLSAVDSSEGNLGDG----------- 435
Query: 827 DIKTDVPNSTRSVEVRTVGSIRSG-SSLENGAYRH-GRRGIAHMKDDGSSYVSDGKLPKR 654
K D+ N RS EV+ VG RS SS++NG++RH GRRG H+KDD S +S+GK +R
Sbjct: 436 --KFDLSN-MRSGEVKAVGGGRSSHSSVDNGSHRHIGRRGPTHVKDDSSPVMSEGKPLRR 492
Query: 653 GGATGYGPHEKQVWVQKSGSGT 588
GGA+GYG HEKQVWVQKS SG+
Sbjct: 493 GGASGYGSHEKQVWVQKSSSGS 514
>ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Vitis
vinifera] gi|297739512|emb|CBI29694.3| unnamed protein
product [Vitis vinifera]
Length = 519
Score = 251 bits (640), Expect(2) = e-104
Identities = 134/208 (64%), Positives = 155/208 (74%), Gaps = 8/208 (3%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
DF+RPEDV+EFAEFFDGHVFVNEKGTQ K +VEYAPSQR+PK W KKDGREGTI KD EY
Sbjct: 59 DFKRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEY 118
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
+EF+ELLAKPVENLPSAEIQLE+REAER GA K+ I+TPLMDF+RQKRAAKG +R S
Sbjct: 119 MEFVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLS 178
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYISA----- 1448
NGKL+RRA G+S GN SSK+GSEKRR ST++YV RD T+I
Sbjct: 179 NGKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDD 238
Query: 1447 ---SDKSNSPNTEVAADMIMDESGASGA 1373
SDKS + A+ + +ESG SGA
Sbjct: 239 QLLSDKSVNLAAGGGAEALEEESGVSGA 266
Score = 156 bits (395), Expect(2) = e-104
Identities = 118/265 (44%), Positives = 152/265 (57%), Gaps = 8/265 (3%)
Frame = -2
Query: 1361 VTS-VRNSAGYPAIRNSQRREVGGGVIRSILSNKEARQSQSSKVVHTEPQIQ--TLEKEK 1191
VTS V+N G A + +QRRE G +IRSIL NK+ARQSQSS + TE Q Q LEKEK
Sbjct: 293 VTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSS-MFQTEQQSQASNLEKEK 351
Query: 1190 KPPRSTNIPSILKNHLSSFSVAAFNSDGDVKRIADVGGESQGSGSINEKQDKRTRNKDRP 1011
+PPR +I K N D K + + ++EKQDKRTRNKDRP
Sbjct: 352 RPPRPPHIQLASKE---------TNGAQDDKVVG-----NDVHSFVSEKQDKRTRNKDRP 397
Query: 1010 DRSVWSH-RRSNGSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKGENTTDSGGKHRSFMSS 834
DR VW+ RRS+GSH + +S + ++ G H
Sbjct: 398 DRGVWTPLRRSDGSH----------------ASDESLSSSASQPTSSDFPEGSHG----- 436
Query: 833 QLDIKTDVPNSTRSVEVRTVGSIRSG-SSLENGAYRH-GRRGIAH-MKD-DGSSYVSDGK 666
++++D+ N+ RS EV+ +GS R G S+L+NG+++H GRRG H +KD DGSS VS+GK
Sbjct: 437 --EMRSDMSNA-RSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGK 493
Query: 665 LPKRGGATGYGPHEKQVWVQKSGSG 591
KRG A GYG HEKQVWVQKS SG
Sbjct: 494 HSKRGSAPGYGSHEKQVWVQKSSSG 518
>ref|XP_010657968.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Vitis
vinifera]
Length = 515
Score = 251 bits (640), Expect(2) = e-104
Identities = 134/208 (64%), Positives = 155/208 (74%), Gaps = 8/208 (3%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
DF+RPEDV+EFAEFFDGHVFVNEKGTQ K +VEYAPSQR+PK W KKDGREGTI KD EY
Sbjct: 59 DFKRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEY 118
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
+EF+ELLAKPVENLPSAEIQLE+REAER GA K+ I+TPLMDF+RQKRAAKG +R S
Sbjct: 119 MEFVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLS 178
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYISA----- 1448
NGKL+RRA G+S GN SSK+GSEKRR ST++YV RD T+I
Sbjct: 179 NGKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDD 238
Query: 1447 ---SDKSNSPNTEVAADMIMDESGASGA 1373
SDKS + A+ + +ESG SGA
Sbjct: 239 QLLSDKSVNLAAGGGAEALEEESGVSGA 266
Score = 156 bits (395), Expect(2) = e-104
Identities = 118/265 (44%), Positives = 152/265 (57%), Gaps = 8/265 (3%)
Frame = -2
Query: 1361 VTS-VRNSAGYPAIRNSQRREVGGGVIRSILSNKEARQSQSSKVVHTEPQIQ--TLEKEK 1191
VTS V+N G A + +QRRE G +IRSIL NK+ARQSQSS + TE Q Q LEKEK
Sbjct: 289 VTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSS-MFQTEQQSQASNLEKEK 347
Query: 1190 KPPRSTNIPSILKNHLSSFSVAAFNSDGDVKRIADVGGESQGSGSINEKQDKRTRNKDRP 1011
+PPR +I K N D K + + ++EKQDKRTRNKDRP
Sbjct: 348 RPPRPPHIQLASKE---------TNGAQDDKVVG-----NDVHSFVSEKQDKRTRNKDRP 393
Query: 1010 DRSVWSH-RRSNGSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKGENTTDSGGKHRSFMSS 834
DR VW+ RRS+GSH + +S + ++ G H
Sbjct: 394 DRGVWTPLRRSDGSH----------------ASDESLSSSASQPTSSDFPEGSHG----- 432
Query: 833 QLDIKTDVPNSTRSVEVRTVGSIRSG-SSLENGAYRH-GRRGIAH-MKD-DGSSYVSDGK 666
++++D+ N+ RS EV+ +GS R G S+L+NG+++H GRRG H +KD DGSS VS+GK
Sbjct: 433 --EMRSDMSNA-RSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGK 489
Query: 665 LPKRGGATGYGPHEKQVWVQKSGSG 591
KRG A GYG HEKQVWVQKS SG
Sbjct: 490 HSKRGSAPGYGSHEKQVWVQKSSSG 514
>ref|XP_010657969.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Vitis
vinifera]
Length = 514
Score = 251 bits (640), Expect(2) = e-104
Identities = 134/208 (64%), Positives = 155/208 (74%), Gaps = 8/208 (3%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
DF+RPEDV+EFAEFFDGHVFVNEKGTQ K +VEYAPSQR+PK W KKDGREGTI KD EY
Sbjct: 59 DFKRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEY 118
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
+EF+ELLAKPVENLPSAEIQLE+REAER GA K+ I+TPLMDF+RQKRAAKG +R S
Sbjct: 119 MEFVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLS 178
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYISA----- 1448
NGKL+RRA G+S GN SSK+GSEKRR ST++YV RD T+I
Sbjct: 179 NGKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDD 238
Query: 1447 ---SDKSNSPNTEVAADMIMDESGASGA 1373
SDKS + A+ + +ESG SGA
Sbjct: 239 QLLSDKSVNLAAGGGAEALEEESGVSGA 266
Score = 156 bits (395), Expect(2) = e-104
Identities = 118/265 (44%), Positives = 152/265 (57%), Gaps = 8/265 (3%)
Frame = -2
Query: 1361 VTS-VRNSAGYPAIRNSQRREVGGGVIRSILSNKEARQSQSSKVVHTEPQIQ--TLEKEK 1191
VTS V+N G A + +QRRE G +IRSIL NK+ARQSQSS + TE Q Q LEKEK
Sbjct: 288 VTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSS-MFQTEQQSQASNLEKEK 346
Query: 1190 KPPRSTNIPSILKNHLSSFSVAAFNSDGDVKRIADVGGESQGSGSINEKQDKRTRNKDRP 1011
+PPR +I K N D K + + ++EKQDKRTRNKDRP
Sbjct: 347 RPPRPPHIQLASKE---------TNGAQDDKVVG-----NDVHSFVSEKQDKRTRNKDRP 392
Query: 1010 DRSVWSH-RRSNGSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKGENTTDSGGKHRSFMSS 834
DR VW+ RRS+GSH + +S + ++ G H
Sbjct: 393 DRGVWTPLRRSDGSH----------------ASDESLSSSASQPTSSDFPEGSHG----- 431
Query: 833 QLDIKTDVPNSTRSVEVRTVGSIRSG-SSLENGAYRH-GRRGIAH-MKD-DGSSYVSDGK 666
++++D+ N+ RS EV+ +GS R G S+L+NG+++H GRRG H +KD DGSS VS+GK
Sbjct: 432 --EMRSDMSNA-RSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGK 488
Query: 665 LPKRGGATGYGPHEKQVWVQKSGSG 591
KRG A GYG HEKQVWVQKS SG
Sbjct: 489 HSKRGSAPGYGSHEKQVWVQKSSSG 513
>ref|XP_012066695.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Jatropha curcas] gi|643736043|gb|KDP42459.1|
hypothetical protein JCGZ_00256 [Jatropha curcas]
Length = 510
Score = 241 bits (614), Expect(2) = 2e-99
Identities = 129/207 (62%), Positives = 154/207 (74%), Gaps = 8/207 (3%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
DFR PEDV+EFAEFF+GH+FVNEKGTQ +A+VEYAPSQRVPK W KKDGREGTILKD Y
Sbjct: 59 DFRSPEDVIEFAEFFNGHLFVNEKGTQFRAVVEYAPSQRVPKQWSKKDGREGTILKDPAY 118
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
LEFLEL++KP ENLPSAEIQLE+REAER G K+ IITPLMDF+RQKRAAK G +R+
Sbjct: 119 LEFLELISKPAENLPSAEIQLERREAERAGIIKDAPIITPLMDFVRQKRAAKTGSRRILG 178
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYI------- 1454
NGKL+RRA + G+ S+SSK+ SEK+R ST++YV RD TYI
Sbjct: 179 NGKLSRRA--GTSGSPGSSSSKRSSEKKRVSTTMYVLRDTAKSTSGKDKSTYILVPKRDD 236
Query: 1453 -SASDKSNSPNTEVAADMIMDESGASG 1376
SDK+ + T A+++ DESGASG
Sbjct: 237 QQLSDKAVTLGTASGAEVLEDESGASG 263
Score = 152 bits (384), Expect(2) = 2e-99
Identities = 105/251 (41%), Positives = 140/251 (55%), Gaps = 4/251 (1%)
Frame = -2
Query: 1328 AIRNSQRREVGGGVIRSILSNKEARQSQSSKVVHTEPQIQT--LEKEKKPPRSTNIPSIL 1155
A++ +QRRE G +IRSIL NKE+RQ+QSS + +E Q+QT EKEK+PPR ++ +L
Sbjct: 298 AVKQNQRREASGRIIRSILLNKESRQNQSSG-IQSEHQMQTSNSEKEKRPPRPPHVQLVL 356
Query: 1154 KNHLSSFSVAAFNSDGDVKRIADVGGESQGSGSINEKQDKRTRNKDRPDRSVWSH-RRSN 978
+ + D I D+ G S EKQ+KRTRNKDRPDR VW+ RRS+
Sbjct: 357 NTN---------GALDDKVVINDLHGFS------GEKQEKRTRNKDRPDRVVWTPLRRSD 401
Query: 977 GSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKGENTTDSGGKHRSFMSSQLDIKTDVPNST 798
GS+ QS GV + D+K D P+++
Sbjct: 402 GSY--------ASDESLSLSASQSTQSGVDSSQGNLG-------------DLKVD-PSNS 439
Query: 797 RSVEVRTVGSIRSGSSLENGAYRH-GRRGIAHMKDDGSSYVSDGKLPKRGGATGYGPHEK 621
RS EV+T+ S SSL+NG+++H GRRG +H D +GK KRGGA+GYG HEK
Sbjct: 440 RSGEVKTLTGRGSHSSLDNGSHKHFGRRGPSHPVRDADGSSGEGKASKRGGASGYGSHEK 499
Query: 620 QVWVQKSGSGT 588
QVWVQKS SG+
Sbjct: 500 QVWVQKSSSGS 510
>ref|XP_012066696.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Jatropha curcas]
Length = 509
Score = 241 bits (614), Expect(2) = 2e-99
Identities = 129/207 (62%), Positives = 154/207 (74%), Gaps = 8/207 (3%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
DFR PEDV+EFAEFF+GH+FVNEKGTQ +A+VEYAPSQRVPK W KKDGREGTILKD Y
Sbjct: 59 DFRSPEDVIEFAEFFNGHLFVNEKGTQFRAVVEYAPSQRVPKQWSKKDGREGTILKDPAY 118
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
LEFLEL++KP ENLPSAEIQLE+REAER G K+ IITPLMDF+RQKRAAK G +R+
Sbjct: 119 LEFLELISKPAENLPSAEIQLERREAERAGIIKDAPIITPLMDFVRQKRAAKTGSRRILG 178
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYI------- 1454
NGKL+RRA + G+ S+SSK+ SEK+R ST++YV RD TYI
Sbjct: 179 NGKLSRRA--GTSGSPGSSSSKRSSEKKRVSTTMYVLRDTAKSTSGKDKSTYILVPKRDD 236
Query: 1453 -SASDKSNSPNTEVAADMIMDESGASG 1376
SDK+ + T A+++ DESGASG
Sbjct: 237 QQLSDKAVTLGTASGAEVLEDESGASG 263
Score = 152 bits (384), Expect(2) = 2e-99
Identities = 105/251 (41%), Positives = 140/251 (55%), Gaps = 4/251 (1%)
Frame = -2
Query: 1328 AIRNSQRREVGGGVIRSILSNKEARQSQSSKVVHTEPQIQT--LEKEKKPPRSTNIPSIL 1155
A++ +QRRE G +IRSIL NKE+RQ+QSS + +E Q+QT EKEK+PPR ++ +L
Sbjct: 297 AVKQNQRREASGRIIRSILLNKESRQNQSSG-IQSEHQMQTSNSEKEKRPPRPPHVQLVL 355
Query: 1154 KNHLSSFSVAAFNSDGDVKRIADVGGESQGSGSINEKQDKRTRNKDRPDRSVWSH-RRSN 978
+ + D I D+ G S EKQ+KRTRNKDRPDR VW+ RRS+
Sbjct: 356 NTN---------GALDDKVVINDLHGFS------GEKQEKRTRNKDRPDRVVWTPLRRSD 400
Query: 977 GSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKGENTTDSGGKHRSFMSSQLDIKTDVPNST 798
GS+ QS GV + D+K D P+++
Sbjct: 401 GSY--------ASDESLSLSASQSTQSGVDSSQGNLG-------------DLKVD-PSNS 438
Query: 797 RSVEVRTVGSIRSGSSLENGAYRH-GRRGIAHMKDDGSSYVSDGKLPKRGGATGYGPHEK 621
RS EV+T+ S SSL+NG+++H GRRG +H D +GK KRGGA+GYG HEK
Sbjct: 439 RSGEVKTLTGRGSHSSLDNGSHKHFGRRGPSHPVRDADGSSGEGKASKRGGASGYGSHEK 498
Query: 620 QVWVQKSGSGT 588
QVWVQKS SG+
Sbjct: 499 QVWVQKSSSGS 509
>ref|XP_011092289.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Sesamum
indicum] gi|747089317|ref|XP_011092290.1| PREDICTED:
regulator of nonsense transcripts UPF3-like [Sesamum
indicum] gi|747089319|ref|XP_011092291.1| PREDICTED:
regulator of nonsense transcripts UPF3-like [Sesamum
indicum]
Length = 518
Score = 237 bits (605), Expect(2) = 2e-96
Identities = 130/208 (62%), Positives = 150/208 (72%), Gaps = 8/208 (3%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
DF RPEDV+EFAEFF+GHVFVNEKGTQ KA+VEYAPSQRVPK W KKDGREGTILKD EY
Sbjct: 59 DFNRPEDVLEFAEFFNGHVFVNEKGTQFKAIVEYAPSQRVPKQWSKKDGREGTILKDPEY 118
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
LEFLE LAKPVENLPSAEIQLE++EAER GA K+ I+TPLMD++RQKRAAKGG +R
Sbjct: 119 LEFLEFLAKPVENLPSAEIQLERKEAERAGAPKDVPIVTPLMDYVRQKRAAKGGARRTML 178
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYISASDKSN 1433
NGK RR G S + S SSK+GSEKR+TST +YV RD TY+ + +
Sbjct: 179 NGKSTRRVGGISSRSPVSGSSKRGSEKRKTST-MYVLRDSSKGASSKEKPTYLLVPKQDD 237
Query: 1432 SPNTEVAA--------DMIMDESGASGA 1373
TE +A D + ESG SG+
Sbjct: 238 QQLTEKSANLAAVSRTDALELESGGSGS 265
Score = 145 bits (367), Expect(2) = 2e-96
Identities = 105/267 (39%), Positives = 137/267 (51%), Gaps = 10/267 (3%)
Frame = -2
Query: 1358 TSVRNSAGYPAIRNSQRREVGGGVIRSILSNKEARQSQSSKVVHTEPQI--QTLEKEKKP 1185
T ++S R +QRRE G +IRSIL NK+ RQ+Q V +EP+I E++KKP
Sbjct: 298 TPAKSSQSSAPSRQNQRRETSGRIIRSILLNKDNRQNQPLPVSQSEPRIHNSNQERDKKP 357
Query: 1184 PRSTNIPSILK--NHLSSFSVAAFNSDGDVKRIADVGGESQGSGSINEKQDKRTRNKDRP 1011
PRS +I + K N + V + D+ + EKQD+R RNKDRP
Sbjct: 358 PRSPSIQLLQKETNGIPEDKVVS----NDLHAVH------------TEKQDRRMRNKDRP 401
Query: 1010 DRSVWSH-RRSNGSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKGENTTDSGGKHRSFMSS 834
DR VW+ RRS+GSH + DS S S
Sbjct: 402 DRGVWTPLRRSDGSHA------------------------------SDDSLSSSASRASQ 431
Query: 833 QLDIKTDVPNS---TRSVEVRTVGSIRSGS-SLENGAYRHGRRGIAH-MKDDGSSYVSDG 669
LD DV N R E R +GS R G S++NG++RHGRR A+ +KD S V +G
Sbjct: 432 VLDPAEDVKNEMLVARGGEYRQIGSGRGGHYSVDNGSFRHGRRSSAYNIKDVDGSSVLEG 491
Query: 668 KLPKRGGATGYGPHEKQVWVQKSGSGT 588
K +RGG++GYGPHEKQVWVQKS SG+
Sbjct: 492 KPSRRGGSSGYGPHEKQVWVQKSSSGS 518
>ref|XP_010930556.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Elaeis guineensis]
Length = 575
Score = 225 bits (573), Expect(2) = 1e-94
Identities = 127/210 (60%), Positives = 153/210 (72%), Gaps = 10/210 (4%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
+F+R EDVVEFAE FDGH+FVNEKG Q KA+VEYAPSQRVP++W KKDGREGTI KD EY
Sbjct: 59 NFKRLEDVVEFAELFDGHIFVNEKGAQFKALVEYAPSQRVPRAWSKKDGREGTISKDPEY 118
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
LEFLELL+KP E+LPSAEIQLE++EAER GA KE I+TPLMDF+RQKRAAK GIQRL
Sbjct: 119 LEFLELLSKP-EHLPSAEIQLERKEAERAGAPKETPIVTPLMDFVRQKRAAKSGIQRLPG 177
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYISASDKSN 1433
NGKL++RA G SK+GS+KRR+STS+YV RD TYI S + +
Sbjct: 178 NGKLSKRAGGV---------SKRGSDKRRSSTSMYVLRDSTKNGGAKDKSTYILGSRRED 228
Query: 1432 S--PNTEVA------ADMIMDE--SGASGA 1373
P+ +A A+ + DE SG+SG+
Sbjct: 229 QQLPDKPIAVASASGAEALEDEFVSGSSGS 258
Score = 152 bits (384), Expect(2) = 1e-94
Identities = 114/285 (40%), Positives = 159/285 (55%), Gaps = 27/285 (9%)
Frame = -2
Query: 1361 VTSVRNSAGYPAIRNSQRREVGGGVIRSILSNKEARQSQS---SKVVHTEPQIQTLEKEK 1191
VTS S+ + S+R E GG +IRSILS KEARQ+QS S + + Q +EK+K
Sbjct: 293 VTSPVRSSPTLTSKQSRRLESGGRIIRSILS-KEARQTQSYIASSLPEQQMQTANMEKDK 351
Query: 1190 KPPRSTNIPSILKNHLSSFSVAAFNSDGDVKRIAD--VG-GESQGSGSINEKQDKRTRNK 1020
+PPR + SI ++H+SS S SDGD KR D VG G GS SI++K D+RTRNK
Sbjct: 352 RPPRPPSTRSISRDHVSSGSPLPSVSDGDDKRYIDDKVGVGYKHGSVSISDKHDRRTRNK 411
Query: 1019 DRPDRSVWSHRR-------SNGSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKG------E 879
DRPDR VW+ R ++G+H + G+ +
Sbjct: 412 DRPDRGVWAPLRRSDRSQSNDGTHSLSSEPALILADSLEDISISQQAAGIKVADDGVVVQ 471
Query: 878 NTTDSGGK----HRSFMSSQLDIKTDVPNSTRSVEVRTVGSIR-SGSSLENGAYRH-GRR 717
N GG R Q + K+D P+++R+ E+++ G R S S++ENG++RH GRR
Sbjct: 472 NALIGGGSSSLADRGMPLGQGERKSDSPSASRTEEMKSHGGGRVSLSTVENGSHRHAGRR 531
Query: 716 GIAH--MKDDGSSYVSDGKLPKRGGATGYGPHEKQVWVQKSGSGT 588
G A + + SS +S+GK KR G++GYG HE+QVWVQKSGS +
Sbjct: 532 GPARGSKEAESSSSISEGKHSKR-GSSGYGSHERQVWVQKSGSAS 575
>ref|XP_010930557.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Elaeis guineensis]
Length = 558
Score = 225 bits (573), Expect(2) = 1e-94
Identities = 127/210 (60%), Positives = 153/210 (72%), Gaps = 10/210 (4%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
+F+R EDVVEFAE FDGH+FVNEKG Q KA+VEYAPSQRVP++W KKDGREGTI KD EY
Sbjct: 42 NFKRLEDVVEFAELFDGHIFVNEKGAQFKALVEYAPSQRVPRAWSKKDGREGTISKDPEY 101
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
LEFLELL+KP E+LPSAEIQLE++EAER GA KE I+TPLMDF+RQKRAAK GIQRL
Sbjct: 102 LEFLELLSKP-EHLPSAEIQLERKEAERAGAPKETPIVTPLMDFVRQKRAAKSGIQRLPG 160
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYISASDKSN 1433
NGKL++RA G SK+GS+KRR+STS+YV RD TYI S + +
Sbjct: 161 NGKLSKRAGGV---------SKRGSDKRRSSTSMYVLRDSTKNGGAKDKSTYILGSRRED 211
Query: 1432 S--PNTEVA------ADMIMDE--SGASGA 1373
P+ +A A+ + DE SG+SG+
Sbjct: 212 QQLPDKPIAVASASGAEALEDEFVSGSSGS 241
Score = 152 bits (384), Expect(2) = 1e-94
Identities = 114/285 (40%), Positives = 159/285 (55%), Gaps = 27/285 (9%)
Frame = -2
Query: 1361 VTSVRNSAGYPAIRNSQRREVGGGVIRSILSNKEARQSQS---SKVVHTEPQIQTLEKEK 1191
VTS S+ + S+R E GG +IRSILS KEARQ+QS S + + Q +EK+K
Sbjct: 276 VTSPVRSSPTLTSKQSRRLESGGRIIRSILS-KEARQTQSYIASSLPEQQMQTANMEKDK 334
Query: 1190 KPPRSTNIPSILKNHLSSFSVAAFNSDGDVKRIAD--VG-GESQGSGSINEKQDKRTRNK 1020
+PPR + SI ++H+SS S SDGD KR D VG G GS SI++K D+RTRNK
Sbjct: 335 RPPRPPSTRSISRDHVSSGSPLPSVSDGDDKRYIDDKVGVGYKHGSVSISDKHDRRTRNK 394
Query: 1019 DRPDRSVWSHRR-------SNGSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKG------E 879
DRPDR VW+ R ++G+H + G+ +
Sbjct: 395 DRPDRGVWAPLRRSDRSQSNDGTHSLSSEPALILADSLEDISISQQAAGIKVADDGVVVQ 454
Query: 878 NTTDSGGK----HRSFMSSQLDIKTDVPNSTRSVEVRTVGSIR-SGSSLENGAYRH-GRR 717
N GG R Q + K+D P+++R+ E+++ G R S S++ENG++RH GRR
Sbjct: 455 NALIGGGSSSLADRGMPLGQGERKSDSPSASRTEEMKSHGGGRVSLSTVENGSHRHAGRR 514
Query: 716 GIAH--MKDDGSSYVSDGKLPKRGGATGYGPHEKQVWVQKSGSGT 588
G A + + SS +S+GK KR G++GYG HE+QVWVQKSGS +
Sbjct: 515 GPARGSKEAESSSSISEGKHSKR-GSSGYGSHERQVWVQKSGSAS 558
>ref|XP_010930558.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X3
[Elaeis guineensis]
Length = 543
Score = 225 bits (573), Expect(2) = 1e-94
Identities = 127/210 (60%), Positives = 153/210 (72%), Gaps = 10/210 (4%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
+F+R EDVVEFAE FDGH+FVNEKG Q KA+VEYAPSQRVP++W KKDGREGTI KD EY
Sbjct: 27 NFKRLEDVVEFAELFDGHIFVNEKGAQFKALVEYAPSQRVPRAWSKKDGREGTISKDPEY 86
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
LEFLELL+KP E+LPSAEIQLE++EAER GA KE I+TPLMDF+RQKRAAK GIQRL
Sbjct: 87 LEFLELLSKP-EHLPSAEIQLERKEAERAGAPKETPIVTPLMDFVRQKRAAKSGIQRLPG 145
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYISASDKSN 1433
NGKL++RA G SK+GS+KRR+STS+YV RD TYI S + +
Sbjct: 146 NGKLSKRAGGV---------SKRGSDKRRSSTSMYVLRDSTKNGGAKDKSTYILGSRRED 196
Query: 1432 S--PNTEVA------ADMIMDE--SGASGA 1373
P+ +A A+ + DE SG+SG+
Sbjct: 197 QQLPDKPIAVASASGAEALEDEFVSGSSGS 226
Score = 152 bits (384), Expect(2) = 1e-94
Identities = 114/285 (40%), Positives = 159/285 (55%), Gaps = 27/285 (9%)
Frame = -2
Query: 1361 VTSVRNSAGYPAIRNSQRREVGGGVIRSILSNKEARQSQS---SKVVHTEPQIQTLEKEK 1191
VTS S+ + S+R E GG +IRSILS KEARQ+QS S + + Q +EK+K
Sbjct: 261 VTSPVRSSPTLTSKQSRRLESGGRIIRSILS-KEARQTQSYIASSLPEQQMQTANMEKDK 319
Query: 1190 KPPRSTNIPSILKNHLSSFSVAAFNSDGDVKRIAD--VG-GESQGSGSINEKQDKRTRNK 1020
+PPR + SI ++H+SS S SDGD KR D VG G GS SI++K D+RTRNK
Sbjct: 320 RPPRPPSTRSISRDHVSSGSPLPSVSDGDDKRYIDDKVGVGYKHGSVSISDKHDRRTRNK 379
Query: 1019 DRPDRSVWSHRR-------SNGSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKG------E 879
DRPDR VW+ R ++G+H + G+ +
Sbjct: 380 DRPDRGVWAPLRRSDRSQSNDGTHSLSSEPALILADSLEDISISQQAAGIKVADDGVVVQ 439
Query: 878 NTTDSGGK----HRSFMSSQLDIKTDVPNSTRSVEVRTVGSIR-SGSSLENGAYRH-GRR 717
N GG R Q + K+D P+++R+ E+++ G R S S++ENG++RH GRR
Sbjct: 440 NALIGGGSSSLADRGMPLGQGERKSDSPSASRTEEMKSHGGGRVSLSTVENGSHRHAGRR 499
Query: 716 GIAH--MKDDGSSYVSDGKLPKRGGATGYGPHEKQVWVQKSGSGT 588
G A + + SS +S+GK KR G++GYG HE+QVWVQKSGS +
Sbjct: 500 GPARGSKEAESSSSISEGKHSKR-GSSGYGSHERQVWVQKSGSAS 543
>ref|XP_007041200.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
gi|508705135|gb|EOX97031.1| Smg-4/UPF3 family protein,
putative isoform 1 [Theobroma cacao]
Length = 514
Score = 238 bits (607), Expect(2) = 1e-93
Identities = 129/207 (62%), Positives = 150/207 (72%), Gaps = 8/207 (3%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
DF+R EDV+EFAEFF+GHVFVNEKGTQ K +VEYAPSQRVPK KKDGREGTILKD EY
Sbjct: 59 DFKRSEDVLEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKRSSKKDGREGTILKDLEY 118
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
LEFLE L KPVENLPSAEIQLE++EAER G K+ I+TPLMDF+RQKRAAKGG +R S
Sbjct: 119 LEFLECLGKPVENLPSAEIQLERKEAERAGVPKDTPIVTPLMDFVRQKRAAKGGSRRSLS 178
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYI------- 1454
NGKL+RRA G+S G S SSK+GSEKRR ST++YV RD TYI
Sbjct: 179 NGKLSRRAGGSSGGTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILVSKRDE 238
Query: 1453 -SASDKSNSPNTEVAADMIMDESGASG 1376
SDK + + + ++ +ESG G
Sbjct: 239 QQLSDKHVALASSMGTEISEEESGVPG 265
Score = 135 bits (340), Expect(2) = 1e-93
Identities = 109/268 (40%), Positives = 145/268 (54%), Gaps = 10/268 (3%)
Frame = -2
Query: 1361 VTS-VRNSAGYPAIRNSQRREVGGGVIRSILSNKEARQSQSSKVVHTEPQIQT--LEKEK 1191
VTS ++ G + + RRE G +IR IL NK+ARQ+QSS V +E QI+T LEK++
Sbjct: 297 VTSPIKTILGSTPTKQNSRRE--GRMIRGILLNKDARQNQSSGV-QSEQQIRTSNLEKDR 353
Query: 1190 KPPRSTNIPSILKNHLSSFSVAAFNSDGDVKRIADVGGESQGSGSINEKQDKRTRNKDRP 1011
+PPR ++ +LK+ ++ SD V VG + GS EK ++R RNKDRP
Sbjct: 354 RPPRHSHSHLVLKDTNTA-------SDDKV-----VGNDLHGS----EKPERRCRNKDRP 397
Query: 1010 DRSVWSHRRSNGSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKGENTTDSGGKHRSFMSSQ 831
DR VW+ RRS+GS+ E+ + S +
Sbjct: 398 DRGVWTLRRSDGSY--------------------------ASDESMSSSASQSALIPLDP 431
Query: 830 L-----DIKTDVPNSTRSVEVRTVGSIRSGSSLENGAYRH--GRRGIAHMKDDGSSYVSD 672
L D K D+ N RSV+V+TVGS R+ SSL+NG++ RRG DGSS +SD
Sbjct: 432 LEGTYGDTKVDLSN-VRSVQVKTVGSGRN-SSLDNGSHNKHVSRRGAV---ADGSSVMSD 486
Query: 671 GKLPKRGGATGYGPHEKQVWVQKSGSGT 588
GK KRG A GYG HEKQVWVQKS SG+
Sbjct: 487 GKPGKRGCAAGYGSHEKQVWVQKSSSGS 514
>ref|XP_006598794.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Glycine max] gi|571524272|ref|XP_006598795.1| PREDICTED:
regulator of nonsense transcripts UPF3-like isoform X2
[Glycine max] gi|734418523|gb|KHN39677.1| Regulator of
nonsense transcripts 3A [Glycine soja]
gi|947056648|gb|KRH06054.1| hypothetical protein
GLYMA_16G002300 [Glycine max]
Length = 512
Score = 229 bits (585), Expect(2) = 3e-92
Identities = 126/206 (61%), Positives = 156/206 (75%), Gaps = 7/206 (3%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
DF+RPEDV+ FAEFF+GHVFVNEKG+Q K +VEYAPSQRVP+ W KKDGR+GTI KD+EY
Sbjct: 59 DFKRPEDVILFAEFFNGHVFVNEKGSQFKVIVEYAPSQRVPRQWSKKDGRDGTIYKDSEY 118
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
LEFLELLAKPVENLPSAEIQLEKREAER GA K+ IITPLMDF+RQKRAAKG +RL S
Sbjct: 119 LEFLELLAKPVENLPSAEIQLEKREAERSGAAKDIPIITPLMDFVRQKRAAKGP-RRLLS 177
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYI------S 1451
NGK+++RA +S G+ S +S++GS K+R S ++YV RD T +
Sbjct: 178 NGKVSQRAGTSSNGSPSSVTSRRGSGKKRVSATMYVARDPGKNSTIKDKSTLVPKQGDQH 237
Query: 1450 ASDK-SNSPNTEVAADMIMDESGASG 1376
SDK SN +++ A++ +DE+G SG
Sbjct: 238 LSDKASNMASSD--ANLTLDENGVSG 261
Score = 139 bits (350), Expect(2) = 3e-92
Identities = 101/262 (38%), Positives = 139/262 (53%), Gaps = 5/262 (1%)
Frame = -2
Query: 1358 TSVRNSAGYPAIRNSQRREVGGGVIRSILSNKEARQSQSSKVVHTEPQIQT--LEKEKKP 1185
+S + G ++ SQR E G +IRSILS KE RQSQ S+ + +E QIQT LEKEK+P
Sbjct: 297 SSAKMIVGSTVLKQSQRHEGSGRIIRSILSKKELRQSQYSRAL-SEQQIQTSNLEKEKQP 355
Query: 1184 PRSTNIPSILKNHLSSFSVAAFNSDGDVKRIADVGGESQGSGSINEKQDKRTRNKDRPDR 1005
PR ++ ILK S+G + V S E+Q++ R+KDRPDR
Sbjct: 356 PRPLHVQLILKG-----------SNGTPENKIGVHDSHVSS----ERQERHVRHKDRPDR 400
Query: 1004 SVWSHRRSNGSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKGENTTDSGGKHRSFMSSQLD 825
VW+ R SNG+ ++ + + S D
Sbjct: 401 GVWTSR-SNGADDSF----------------------------SSSASSQVDPLEGSHAD 431
Query: 824 IKTDVPNSTRSVEVRTVGSIRSGSSLENGAYRH-GRRGIAH-MKD-DGSSYVSDGKLPKR 654
+K D PN+ RS EV+++GS+R+ S ENG +H GRRG +H +KD DG S S+GK P+R
Sbjct: 432 LKHDTPNA-RSGEVKSLGSVRTSHSSENGFNKHFGRRGPSHGVKDVDGYSVSSEGKHPRR 490
Query: 653 GGATGYGPHEKQVWVQKSGSGT 588
+ YG +EKQVWVQK+ SGT
Sbjct: 491 SSTSAYGSNEKQVWVQKASSGT 512
>ref|XP_004485449.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Cicer
arietinum]
Length = 510
Score = 235 bits (600), Expect(2) = 1e-90
Identities = 128/207 (61%), Positives = 151/207 (72%), Gaps = 7/207 (3%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
DF +PEDV+EFAEFF+GHVFVNEKGTQ K VEYAPSQRVPK W KKDGR+GTI KD EY
Sbjct: 56 DFNKPEDVIEFAEFFNGHVFVNEKGTQFKVTVEYAPSQRVPKQWSKKDGRDGTIYKDPEY 115
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
LEFLELLAKPVENLPSAEIQLEKREAER GAGK+ I+TPLMDF+RQKRAAKG +RLSS
Sbjct: 116 LEFLELLAKPVENLPSAEIQLEKREAERSGAGKDVPIVTPLMDFVRQKRAAKGP-RRLSS 174
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYISASDK-- 1439
NGK+ RR S G+S S S++GS ++R ST++YV RD TYI +
Sbjct: 175 NGKVTRRTGTPSNGSSSSAPSRRGSARKRVSTTMYVARDPGKNSTVKDKSTYILVPRQGD 234
Query: 1438 ---SNSPNTEVAAD--MIMDESGASGA 1373
SN + ++D DE+G +G+
Sbjct: 235 QHLSNKSSNIASSDGNPTFDENGIAGS 261
Score = 128 bits (321), Expect(2) = 1e-90
Identities = 95/262 (36%), Positives = 137/262 (52%), Gaps = 5/262 (1%)
Frame = -2
Query: 1358 TSVRNSAGYPAIRNSQRREVGGGVIRSILSNKEARQSQSSKVVHTEPQIQT--LEKEKKP 1185
+S + A++ +QR E G +I+SILSNK+ RQ+QSS+ ++E Q+QT LEKEK+P
Sbjct: 295 SSAKTILNSTALKQNQRHEGSGRIIKSILSNKDLRQNQSSR-AYSERQLQTSNLEKEKQP 353
Query: 1184 PRSTNIPSILKNHLSSFSVAAFNSDGDVKRIADVGGESQGSGSINEKQDKRTRNKDRPDR 1005
R ++ ILK +DG + V G S E+Q++R R KDRPDR
Sbjct: 354 TRPLHVQLILK-----------GTDGAPENRITVHGLHVSS----ERQERRFRQKDRPDR 398
Query: 1004 SVWSHRRSNGSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKGENTTDSGGKHRSFMSSQLD 825
+W+ RSNG G ++ + + +
Sbjct: 399 GIWT-SRSNG----------------------------GDESLSSSASSQVDPLEGGHAE 429
Query: 824 IKTDVPNSTRSVEVRTVGSIRSGSSLENGAYRH-GRRGIAH-MKD-DGSSYVSDGKLPKR 654
+K D S RS EV++ GS+R+ S ENG +H GRRG H +KD DG S S+GK P++
Sbjct: 430 LKHDT-RSARSGEVKSFGSLRASHSSENGFNKHFGRRGPIHGVKDVDGYSVSSEGKHPRK 488
Query: 653 GGATGYGPHEKQVWVQKSGSGT 588
++ YG +EKQVWVQK+ SGT
Sbjct: 489 PSSSAYGSNEKQVWVQKASSGT 510
>ref|XP_008786472.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Phoenix dactylifera]
Length = 574
Score = 223 bits (569), Expect(2) = 2e-90
Identities = 128/210 (60%), Positives = 148/210 (70%), Gaps = 10/210 (4%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
+F+R EDVVEFAE FDGH+FVNEKG Q KA+VEYAPSQRVPK W KKDGREGTI KD EY
Sbjct: 59 NFKRLEDVVEFAELFDGHIFVNEKGAQFKALVEYAPSQRVPKPWPKKDGREGTISKDPEY 118
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
LEFLELL+KP E+LPSAEIQLE++EAER GA KE I+TPLMDF+RQKRAAK GIQRL
Sbjct: 119 LEFLELLSKP-EHLPSAEIQLERKEAERAGAPKETPIVTPLMDFVRQKRAAKSGIQRLPG 177
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYISAS---- 1445
NGKL++RA G SK+GS+KRR STS+YV RD TYI S
Sbjct: 178 NGKLSKRAGGV---------SKRGSDKRRLSTSMYVLRDNTKNGGAKDKPTYILVSRRED 228
Query: 1444 ----DKSNSPNTEVAADMIMDE--SGASGA 1373
DK S + + + DE SG+SG+
Sbjct: 229 QQLPDKPISVASSSGTEALEDEFVSGSSGS 258
Score = 139 bits (351), Expect(2) = 2e-90
Identities = 110/285 (38%), Positives = 158/285 (55%), Gaps = 27/285 (9%)
Frame = -2
Query: 1361 VTSVRNSAGYPAIRNSQRREVGGGVIRSILSNKEARQSQSSKVV-HTEPQIQT--LEKEK 1191
+TS+R+S + + S+R E G +IR ILS KEARQ+QS V E Q+QT +EK+K
Sbjct: 293 LTSLRSSPTSTS-KQSRRLESSGRIIRGILS-KEARQTQSYTVSSQPEQQMQTANVEKDK 350
Query: 1190 KPPRSTNIPSILKNHLSSFSVAAFNSDGDVKRIAD---VGGESQGSGSINEKQDKRTRNK 1020
+PPR + SI ++H+SS S SDGD KR D G GS SI++K D+RTRNK
Sbjct: 351 RPPRPPSARSIPRDHVSSSSPLPSVSDGDDKRYIDDKVAAGYKHGSVSISDKHDRRTRNK 410
Query: 1019 DRPDRSVWSHRR-------SNGSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKGENTTDSG 861
DRPDR VW+ R ++G+H + G+ ++
Sbjct: 411 DRPDRGVWAPLRRSDRSQSNDGTHSSSPEPALILADSLEDVSISQQAAGIRLADDGVVVQ 470
Query: 860 GKHRSFMSSQL----------DIKTDVPNSTRSVEVRTVGSIR-SGSSLENGAYRH-GRR 717
H SS L + K+D +++R+ E+++ G R S +ENG++RH GRR
Sbjct: 471 NAHVGRGSSSLADHGMQLGQGERKSDSLSASRTEEMKSHGGGRVSLFVVENGSHRHAGRR 530
Query: 716 G-IAHMKD-DGSSYVSDGKLPKRGGATGYGPHEKQVWVQKSGSGT 588
G + KD + SS +S+GK KR G++G+G HE+QVWVQKSGS +
Sbjct: 531 GPVRGSKDAESSSSISEGKHSKR-GSSGFGSHERQVWVQKSGSAS 574
>ref|XP_010912655.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Elaeis
guineensis]
Length = 562
Score = 218 bits (554), Expect(2) = 7e-89
Identities = 123/203 (60%), Positives = 141/203 (69%), Gaps = 8/203 (3%)
Frame = -3
Query: 1969 FRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEYL 1790
F+RPEDVVEFAEFFDGH+FVNEKG Q K +VEYAPSQ VPK KKDGREGTI KD EYL
Sbjct: 60 FKRPEDVVEFAEFFDGHIFVNEKGAQFKVLVEYAPSQHVPKPSSKKDGREGTISKDPEYL 119
Query: 1789 EFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSSN 1610
EFLE L+KP E+LPSAEIQLE++EAER GA KE I+TPLMDF+RQKRAAK G QRL+ N
Sbjct: 120 EFLEHLSKP-EHLPSAEIQLERKEAERAGAQKEMPIVTPLMDFVRQKRAAKNGAQRLAGN 178
Query: 1609 GKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYI-------- 1454
GKL++RAMG K+GSEKRR STS+YV RD TYI
Sbjct: 179 GKLSKRAMGV---------MKRGSEKRRLSTSMYVLRDGRKNGSSKDKPTYILVPRREEQ 229
Query: 1453 SASDKSNSPNTEVAADMIMDESG 1385
DKS + + A+ + DE G
Sbjct: 230 QLPDKSFAVASASGAEALEDEFG 252
Score = 140 bits (352), Expect(2) = 7e-89
Identities = 101/269 (37%), Positives = 136/269 (50%), Gaps = 13/269 (4%)
Frame = -2
Query: 1361 VTSVRNSAGYPAIRNSQRREVGGGVIRSILSNKEARQSQSSKVVHTEPQIQTLEKEKKPP 1182
VT+ S+ + +QR E GG +IRSILSN+ + + +S Q LEK+K+PP
Sbjct: 293 VTTTARSSPTSTSKQNQRLEAGGRIIRSILSNEVRQSNMASSQPEQHMQTTNLEKDKRPP 352
Query: 1181 RSTNIPSILKNHLSSFSVAAFNSDGDVKRIAD---VGGESQGSGSINEKQDKRTRNKDRP 1011
R + SI K+H+ S SDGD KR D QGS SI +K +KRTRNKDRP
Sbjct: 353 RPPSTRSISKDHVCGSSSPVSISDGDDKRYIDDMVAMSYKQGSVSIVDKHEKRTRNKDRP 412
Query: 1010 DRSVWS------HRRSNGSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKGENTTDSGGKHR 849
D VW+ +SN S K +
Sbjct: 413 DWGVWAPLCRSDRSQSNDGTFSSSSEAAQILVDSIENVSISQQAAGNKVADDNVVVRNAH 472
Query: 848 SFMSSQLDIKTDVPNSTRSVEVRTVGSIR-SGSSLENGAYRH-GRRGIAHMKDD--GSSY 681
Q + K+D P+++R+ E+++ G R S S LENG++RH GRRG A D SS
Sbjct: 473 DMPIGQGERKSDTPSASRTEEMKSHGGGRVSLSMLENGSHRHVGRRGPARASKDAESSSS 532
Query: 680 VSDGKLPKRGGATGYGPHEKQVWVQKSGS 594
+S+GK KR G++ YG HE+QVWVQKSGS
Sbjct: 533 ISEGKHSKR-GSSSYGSHERQVWVQKSGS 560
>ref|XP_012436522.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X3
[Gossypium raimondii] gi|763780788|gb|KJB47859.1|
hypothetical protein B456_008G045900 [Gossypium
raimondii] gi|763780790|gb|KJB47861.1| hypothetical
protein B456_008G045900 [Gossypium raimondii]
gi|763780798|gb|KJB47869.1| hypothetical protein
B456_008G045900 [Gossypium raimondii]
Length = 516
Score = 239 bits (610), Expect(2) = 7e-89
Identities = 128/207 (61%), Positives = 149/207 (71%), Gaps = 8/207 (3%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
DF+RPEDV+EFAEFF+GHVFV+EKG Q KA+VEYAPSQRVPK + KDGREGTI KD EY
Sbjct: 66 DFKRPEDVLEFAEFFNGHVFVSEKGAQFKAVVEYAPSQRVPKQFSNKDGREGTISKDPEY 125
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
LEFLE LAKPVENLPSAEIQLE+REAER G K+ I+TPLMDF+RQKRAAKG +R S
Sbjct: 126 LEFLEFLAKPVENLPSAEIQLERREAERAGVSKDSPIVTPLMDFVRQKRAAKGASRRSLS 185
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYI------- 1454
NGK+++RA G S G+ S SS++GSEKRR ST+VYV RD YI
Sbjct: 186 NGKVSKRAGGLSGGSPSSASSRRGSEKRRGSTTVYVLRDSLKNASGKDKSAYILVSKRDD 245
Query: 1453 -SASDKSNSPNTEVAADMIMDESGASG 1376
SDK + T V + +ESG SG
Sbjct: 246 KQLSDKHATLATPVGTQISEEESGVSG 272
Score = 118 bits (296), Expect(2) = 7e-89
Identities = 96/257 (37%), Positives = 131/257 (50%), Gaps = 7/257 (2%)
Frame = -2
Query: 1337 GYPAIRNSQRREVGGGVIRSILSNKEARQSQSSKVVHTEPQIQT--LEKEKKPPRSTNIP 1164
G I+ + RE G +IR +L NK+AR+S V +E Q+Q LEK+++P R ++
Sbjct: 313 GSTPIKQNVGRE--GRIIRGVLLNKDARESSR---VQSEQQLQAPNLEKDRRPSRHSHAQ 367
Query: 1163 SILKNHLSSFSVAAFNSDGDVKRIADVGGESQGSGSINEKQDKRTRNKDRPDRSVWSHRR 984
+LK+ NS D VG + GS EK ++R RNKDRPDR VW+ RR
Sbjct: 368 LVLKDT---------NSSDD-----KVGSDLHGS----EKPERRRRNKDRPDRGVWTLRR 409
Query: 983 SNGSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKGENTTDSGGKHR-----SFMSSQLDIK 819
S+GS+ E+ + S + S + D K
Sbjct: 410 SDGSY--------------------------ASDESLSSSASQSAQMPLDSSEGAYGDTK 443
Query: 818 TDVPNSTRSVEVRTVGSIRSGSSLENGAYRHGRRGIAHMKDDGSSYVSDGKLPKRGGATG 639
D+ N RS++ +TV S R+ SS + G+ +HG R A DGSS VSDGK KRG A+
Sbjct: 444 VDLSN-VRSMQPKTVRSGRN-SSFDGGSSKHGSRCGAVA--DGSSVVSDGKPGKRGNASA 499
Query: 638 YGPHEKQVWVQKSGSGT 588
YG HEKQVWVQKS SG+
Sbjct: 500 YGSHEKQVWVQKSSSGS 516
>gb|KJB47856.1| hypothetical protein B456_008G045900 [Gossypium raimondii]
gi|763780787|gb|KJB47858.1| hypothetical protein
B456_008G045900 [Gossypium raimondii]
Length = 509
Score = 239 bits (610), Expect(2) = 7e-89
Identities = 128/207 (61%), Positives = 149/207 (71%), Gaps = 8/207 (3%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
DF+RPEDV+EFAEFF+GHVFV+EKG Q KA+VEYAPSQRVPK + KDGREGTI KD EY
Sbjct: 59 DFKRPEDVLEFAEFFNGHVFVSEKGAQFKAVVEYAPSQRVPKQFSNKDGREGTISKDPEY 118
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
LEFLE LAKPVENLPSAEIQLE+REAER G K+ I+TPLMDF+RQKRAAKG +R S
Sbjct: 119 LEFLEFLAKPVENLPSAEIQLERREAERAGVSKDSPIVTPLMDFVRQKRAAKGASRRSLS 178
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYI------- 1454
NGK+++RA G S G+ S SS++GSEKRR ST+VYV RD YI
Sbjct: 179 NGKVSKRAGGLSGGSPSSASSRRGSEKRRGSTTVYVLRDSLKNASGKDKSAYILVSKRDD 238
Query: 1453 -SASDKSNSPNTEVAADMIMDESGASG 1376
SDK + T V + +ESG SG
Sbjct: 239 KQLSDKHATLATPVGTQISEEESGVSG 265
Score = 118 bits (296), Expect(2) = 7e-89
Identities = 96/257 (37%), Positives = 131/257 (50%), Gaps = 7/257 (2%)
Frame = -2
Query: 1337 GYPAIRNSQRREVGGGVIRSILSNKEARQSQSSKVVHTEPQIQT--LEKEKKPPRSTNIP 1164
G I+ + RE G +IR +L NK+AR+S V +E Q+Q LEK+++P R ++
Sbjct: 306 GSTPIKQNVGRE--GRIIRGVLLNKDARESSR---VQSEQQLQAPNLEKDRRPSRHSHAQ 360
Query: 1163 SILKNHLSSFSVAAFNSDGDVKRIADVGGESQGSGSINEKQDKRTRNKDRPDRSVWSHRR 984
+LK+ NS D VG + GS EK ++R RNKDRPDR VW+ RR
Sbjct: 361 LVLKDT---------NSSDD-----KVGSDLHGS----EKPERRRRNKDRPDRGVWTLRR 402
Query: 983 SNGSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKGENTTDSGGKHR-----SFMSSQLDIK 819
S+GS+ E+ + S + S + D K
Sbjct: 403 SDGSY--------------------------ASDESLSSSASQSAQMPLDSSEGAYGDTK 436
Query: 818 TDVPNSTRSVEVRTVGSIRSGSSLENGAYRHGRRGIAHMKDDGSSYVSDGKLPKRGGATG 639
D+ N RS++ +TV S R+ SS + G+ +HG R A DGSS VSDGK KRG A+
Sbjct: 437 VDLSN-VRSMQPKTVRSGRN-SSFDGGSSKHGSRCGAVA--DGSSVVSDGKPGKRGNASA 492
Query: 638 YGPHEKQVWVQKSGSGT 588
YG HEKQVWVQKS SG+
Sbjct: 493 YGSHEKQVWVQKSSSGS 509
>ref|XP_008786471.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Phoenix dactylifera]
Length = 581
Score = 223 bits (569), Expect(2) = 2e-88
Identities = 128/210 (60%), Positives = 148/210 (70%), Gaps = 10/210 (4%)
Frame = -3
Query: 1972 DFRRPEDVVEFAEFFDGHVFVNEKGTQVKAMVEYAPSQRVPKSWCKKDGREGTILKDAEY 1793
+F+R EDVVEFAE FDGH+FVNEKG Q KA+VEYAPSQRVPK W KKDGREGTI KD EY
Sbjct: 59 NFKRLEDVVEFAELFDGHIFVNEKGAQFKALVEYAPSQRVPKPWPKKDGREGTISKDPEY 118
Query: 1792 LEFLELLAKPVENLPSAEIQLEKREAERVGAGKEPLIITPLMDFIRQKRAAKGGIQRLSS 1613
LEFLELL+KP E+LPSAEIQLE++EAER GA KE I+TPLMDF+RQKRAAK GIQRL
Sbjct: 119 LEFLELLSKP-EHLPSAEIQLERKEAERAGAPKETPIVTPLMDFVRQKRAAKSGIQRLPG 177
Query: 1612 NGKLNRRAMGASPGNSRSTSSKQGSEKRRTSTSVYVKRDXXXXXXXXXXXTYISAS---- 1445
NGKL++RA G SK+GS+KRR STS+YV RD TYI S
Sbjct: 178 NGKLSKRAGGV---------SKRGSDKRRLSTSMYVLRDNTKNGGAKDKPTYILVSRRED 228
Query: 1444 ----DKSNSPNTEVAADMIMDE--SGASGA 1373
DK S + + + DE SG+SG+
Sbjct: 229 QQLPDKPISVASSSGTEALEDEFVSGSSGS 258
Score = 132 bits (333), Expect(2) = 2e-88
Identities = 110/292 (37%), Positives = 158/292 (54%), Gaps = 34/292 (11%)
Frame = -2
Query: 1361 VTSVRNSAGYPAIRNSQRREVGGGVIRSILSNKEARQSQSSKVV-HTEPQIQT--LEKEK 1191
+TS+R+S + + S+R E G +IR ILS KEARQ+QS V E Q+QT +EK+K
Sbjct: 293 LTSLRSSPTSTS-KQSRRLESSGRIIRGILS-KEARQTQSYTVSSQPEQQMQTANVEKDK 350
Query: 1190 KPPRSTNIPSILKNHLSSFSVAAFNSDGDVKRIAD---VGGESQGSGSINEKQDKRTRNK 1020
+PPR + SI ++H+SS S SDGD KR D G GS SI++K D+RTRNK
Sbjct: 351 RPPRPPSARSIPRDHVSSSSPLPSVSDGDDKRYIDDKVAAGYKHGSVSISDKHDRRTRNK 410
Query: 1019 DRPDRSVWSHRR-------SNGSHXXXXXXXXXXXXXXXXXTHQSHPPGVGKGENTTDSG 861
DRPDR VW+ R ++G+H + G+ ++
Sbjct: 411 DRPDRGVWAPLRRSDRSQSNDGTHSSSPEPALILADSLEDVSISQQAAGIRLADDGVVVQ 470
Query: 860 GKHRSFMSSQL----------DIKTDVPNSTRSVEVRTVGSIR-SGSSLENGAYRH-GRR 717
H SS L + K+D +++R+ E+++ G R S +ENG++RH GRR
Sbjct: 471 NAHVGRGSSSLADHGMQLGQGERKSDSLSASRTEEMKSHGGGRVSLFVVENGSHRHAGRR 530
Query: 716 G-IAHMKD-DGSSYVSDGKLPKRGGATGYGPHE-------KQVWVQKSGSGT 588
G + KD + SS +S+GK KR G++G+G HE +QVWVQKSGS +
Sbjct: 531 GPVRGSKDAESSSSISEGKHSKR-GSSGFGSHEVSQDYDIRQVWVQKSGSAS 581