BLASTX nr result
ID: Aconitum23_contig00008189
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00008189
(434 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s... 99 5e-34
ref|XP_006828249.1| PREDICTED: DNA-directed RNA polymerase III s... 97 4e-30
ref|XP_011627269.1| PREDICTED: DNA-directed RNA polymerase III s... 97 4e-30
gb|KMZ71142.1| DNA-directed RNA polymerase [Zostera marina] 99 2e-29
gb|ACJ63308.1| RNA polymerase III large subunit [Drimys winteri] 102 3e-29
ref|XP_008358064.1| PREDICTED: DNA-directed RNA polymerase III s... 101 5e-29
ref|XP_008358068.1| PREDICTED: DNA-directed RNA polymerase III s... 101 5e-29
ref|XP_009402242.1| PREDICTED: DNA-directed RNA polymerase III s... 96 5e-29
gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tu... 92 7e-29
gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale] 101 2e-28
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 92 3e-28
ref|XP_008803030.1| PREDICTED: DNA-directed RNA polymerase III s... 99 3e-28
gb|EMS65535.1| DNA-directed RNA polymerase III subunit RPC1 [Tri... 94 6e-28
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 96 8e-28
gb|KQK97866.1| hypothetical protein SETIT_009186mg [Setaria ital... 96 8e-28
gb|KQJ92762.1| hypothetical protein BRADI_3g00507 [Brachypodium ... 94 2e-27
gb|KQJ92760.1| hypothetical protein BRADI_3g00507 [Brachypodium ... 94 2e-27
ref|XP_010236212.1| PREDICTED: DNA-directed RNA polymerase III s... 94 2e-27
gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Tri... 94 3e-27
gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 94 3e-27
>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nelumbo
nucifera]
Length = 1392
Score = 98.6 bits (244), Expect(2) = 5e-34
Identities = 47/64 (73%), Positives = 56/64 (87%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTADTG MSRRL+KALEDL+V YD+T+R+A+G VVQF YG DG+DPA
Sbjct: 856 MGGREGLVDTAVKTADTGYMSRRLIKALEDLAVYYDDTVRNASGGVVQFLYGDDGLDPAN 915
Query: 252 LEGK 241
+EGK
Sbjct: 916 MEGK 919
Score = 72.8 bits (177), Expect(2) = 5e-34
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = -1
Query: 245 ERMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRIR 66
ER++ K KAT SG +A L SEI++ +D +S+Y +T DG S FK L+ F NRI
Sbjct: 927 ERVYLKTKATCPSGTNASLCPSEIVKILDDRISRYDMTPDGGCSSAFKKLLVDFIQNRIS 986
Query: 65 SLRNTRKLLNIDEQNVDKEES 3
LRNTRK L +DE+ K+ S
Sbjct: 987 ILRNTRKALGLDEEYAKKDNS 1007
>ref|XP_006828249.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
[Amborella trichopoda] gi|548832896|gb|ERM95665.1|
hypothetical protein AMTR_s00023p00196820 [Amborella
trichopoda]
Length = 1383
Score = 96.7 bits (239), Expect(2) = 4e-30
Identities = 43/65 (66%), Positives = 56/65 (86%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTADTG +SRRL+K+LEDLS YD+T+R+++G ++QF YG DGMDPA
Sbjct: 843 MGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDTVRNSSGTIIQFSYGDDGMDPAK 902
Query: 252 LEGKN 238
+EGK+
Sbjct: 903 MEGKS 907
Score = 61.6 bits (148), Expect(2) = 4e-30
Identities = 32/80 (40%), Positives = 49/80 (61%)
Frame = -1
Query: 245 ERMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRIR 66
+R+F K+KAT + A LS SEI V+ LSK+ +T + S+ FK+ L F R+
Sbjct: 914 DRLFMKIKATCPASVSASLSPSEISTIVNDRLSKHDMTPERGCSMAFKEELSNFIKKRMD 973
Query: 65 SLRNTRKLLNIDEQNVDKEE 6
+++ TR +L +DE VDKE+
Sbjct: 974 AIKKTRNMLGLDEDCVDKEK 993
>ref|XP_011627269.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
[Amborella trichopoda]
Length = 1367
Score = 96.7 bits (239), Expect(2) = 4e-30
Identities = 43/65 (66%), Positives = 56/65 (86%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTADTG +SRRL+K+LEDLS YD+T+R+++G ++QF YG DGMDPA
Sbjct: 843 MGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDTVRNSSGTIIQFSYGDDGMDPAK 902
Query: 252 LEGKN 238
+EGK+
Sbjct: 903 MEGKS 907
Score = 61.6 bits (148), Expect(2) = 4e-30
Identities = 32/80 (40%), Positives = 49/80 (61%)
Frame = -1
Query: 245 ERMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRIR 66
+R+F K+KAT + A LS SEI V+ LSK+ +T + S+ FK+ L F R+
Sbjct: 914 DRLFMKIKATCPASVSASLSPSEISTIVNDRLSKHDMTPERGCSMAFKEELSNFIKKRMD 973
Query: 65 SLRNTRKLLNIDEQNVDKEE 6
+++ TR +L +DE VDKE+
Sbjct: 974 AIKKTRNMLGLDEDCVDKEK 993
>gb|KMZ71142.1| DNA-directed RNA polymerase [Zostera marina]
Length = 758
Score = 99.4 bits (246), Expect(2) = 2e-29
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTADTG MSRRL+K LEDLS YD T+R+++G ++QF YG DGMDPA
Sbjct: 213 MGGREGLVDTAVKTADTGYMSRRLIKGLEDLSAYYDQTVRNSSGSIIQFRYGDDGMDPAK 272
Query: 252 LEGKN 238
+EGKN
Sbjct: 273 MEGKN 277
Score = 56.6 bits (135), Expect(2) = 2e-29
Identities = 28/80 (35%), Positives = 49/80 (61%)
Frame = -1
Query: 242 RMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRIRS 63
++F ++ AT S + + LS SEI + D LS++ +T +G S F+DS++KF N++ S
Sbjct: 285 QLFGRILATCHSDS-STLSPSEIHKITDKRLSRFDMTPEGGCSTAFRDSILKFIENKVES 343
Query: 62 LRNTRKLLNIDEQNVDKEES 3
L TR L +D++ ++S
Sbjct: 344 LEKTRMLFKLDDEKFGVQKS 363
>gb|ACJ63308.1| RNA polymerase III large subunit [Drimys winteri]
Length = 547
Score = 102 bits (254), Expect(2) = 3e-29
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTA+TG MSRRL+KALEDLS+ YD T+R+A+G +VQFHYG DGMDPA
Sbjct: 343 MGGREGLVDTAVKTAETGYMSRRLMKALEDLSIHYDETVRNASGGIVQFHYGDDGMDPAK 402
Query: 252 LEGKN 238
+EGK+
Sbjct: 403 MEGKS 407
Score = 52.8 bits (125), Expect(2) = 3e-29
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = -1
Query: 245 ERMFSKVKATF-SSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRI 69
+R+F K++AT ++ A LS SEI +Y + LSK+ T +G S FK L+ F + +I
Sbjct: 414 DRLFMKIQATCPTTNASIPLSPSEISQYANDRLSKHDATPEGGCSSAFKQMLLDFIHEKI 473
Query: 68 RSLRNTRKLLNIDE 27
+LRN ++L ID+
Sbjct: 474 ATLRNVSRILQIDD 487
>ref|XP_008358064.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
[Malus domestica]
Length = 1419
Score = 101 bits (252), Expect(2) = 5e-29
Identities = 48/64 (75%), Positives = 56/64 (87%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTADTG MSRRL K LEDLSVQYDNT+R+++G +VQF YG DGMDPA+
Sbjct: 855 MGGREGLVDTAVKTADTGYMSRRLSKILEDLSVQYDNTVRNSSGSIVQFCYGDDGMDPAM 914
Query: 252 LEGK 241
+EGK
Sbjct: 915 MEGK 918
Score = 52.8 bits (125), Expect(2) = 5e-29
Identities = 29/80 (36%), Positives = 43/80 (53%)
Frame = -1
Query: 242 RMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRIRS 63
R+F K KAT +G LS E+ V LSK+ +T DG + FK SL KF + +++
Sbjct: 928 RLFLKAKATCPAGGSDTLSXEEVSEIVSSRLSKHDMTPDGGCAAGFKTSLEKFLDKFVKT 987
Query: 62 LRNTRKLLNIDEQNVDKEES 3
R T + +D+ KE+S
Sbjct: 988 FRETHETFVLDQNPAWKEKS 1007
>ref|XP_008358068.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
[Malus domestica]
Length = 1390
Score = 101 bits (252), Expect(2) = 5e-29
Identities = 48/64 (75%), Positives = 56/64 (87%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTADTG MSRRL K LEDLSVQYDNT+R+++G +VQF YG DGMDPA+
Sbjct: 855 MGGREGLVDTAVKTADTGYMSRRLSKILEDLSVQYDNTVRNSSGSIVQFCYGDDGMDPAM 914
Query: 252 LEGK 241
+EGK
Sbjct: 915 MEGK 918
Score = 52.8 bits (125), Expect(2) = 5e-29
Identities = 29/80 (36%), Positives = 43/80 (53%)
Frame = -1
Query: 242 RMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRIRS 63
R+F K KAT +G LS E+ V LSK+ +T DG + FK SL KF + +++
Sbjct: 928 RLFLKAKATCPAGGSDTLSXEEVSEIVSSRLSKHDMTPDGGCAAGFKTSLEKFLDKFVKT 987
Query: 62 LRNTRKLLNIDEQNVDKEES 3
R T + +D+ KE+S
Sbjct: 988 FRETHETFVLDQNPAWKEKS 1007
>ref|XP_009402242.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Musa
acuminata subsp. malaccensis]
Length = 1372
Score = 96.3 bits (238), Expect(2) = 5e-29
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTA+TG MSRRL+K LEDLS+ YD T+R+A+G +VQF YG DGMDPA
Sbjct: 836 MGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDETVRNASGGIVQFLYGDDGMDPAK 895
Query: 252 LEGKN 238
+EGK+
Sbjct: 896 MEGKD 900
Score = 58.2 bits (139), Expect(2) = 5e-29
Identities = 30/81 (37%), Positives = 49/81 (60%)
Frame = -1
Query: 245 ERMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRIR 66
+++F KV AT H +LS +E LR +D L+KY ++ +G S FK L F + R+
Sbjct: 907 DQLFMKVMATCPPREHDMLSPTEALRIMDDRLAKYDMSPEGGCSAAFKKLLSDFVHKRVS 966
Query: 65 SLRNTRKLLNIDEQNVDKEES 3
+L N RK L +DE ++ +++S
Sbjct: 967 ALANMRKSLKLDETDMGRKDS 987
>gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tulipifera]
Length = 546
Score = 91.7 bits (226), Expect(2) = 7e-29
Identities = 43/64 (67%), Positives = 53/64 (82%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTA+TG MSRRL+K+LEDLS YD T+R+++G +VQ YG DGMDPA
Sbjct: 345 MGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLLYGDDGMDPAN 404
Query: 252 LEGK 241
+EGK
Sbjct: 405 MEGK 408
Score = 62.4 bits (150), Expect(2) = 7e-29
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = -1
Query: 245 ERMFSKVKATF-SSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRI 69
+R+F K KATF ++ AH LS SEIL+ D LSK+ +T +G S FK+SL F +
Sbjct: 416 DRLFMKTKATFPATRAHTSLSPSEILKAADDRLSKHDMTPEGGCSAAFKESLSDFLKKCV 475
Query: 68 RSLRNTRKLLNIDEQNV 18
+LR TR+ L +DE V
Sbjct: 476 VALRKTRRELGLDEDKV 492
>gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]
Length = 554
Score = 101 bits (251), Expect(2) = 2e-28
Identities = 48/65 (73%), Positives = 57/65 (87%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTADTG MSRRL+KALEDLS+ YD+T+RSA+G VVQF YG DGMDP+
Sbjct: 343 MGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYGDDGMDPSR 402
Query: 252 LEGKN 238
+EGK+
Sbjct: 403 MEGKD 407
Score = 51.2 bits (121), Expect(2) = 2e-28
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 11/83 (13%)
Frame = -1
Query: 245 ERMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIK------- 87
+R++ KVKAT + H+ LS +EIL+ V LSK+ +T +G S FK SL+
Sbjct: 414 DRLYMKVKATCPARGHSSLSPAEILKLVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQN 473
Query: 86 ----FFNNRIRSLRNTRKLLNID 30
F I SL+NTR+ L +D
Sbjct: 474 KEGGFLGKCITSLKNTRRDLQLD 496
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon] gi|944063807|gb|KQJ99397.1|
hypothetical protein BRADI_3g43050 [Brachypodium
distachyon]
Length = 1392
Score = 91.7 bits (226), Expect(2) = 3e-28
Identities = 44/64 (68%), Positives = 52/64 (81%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTA+TG MSRRL+K LEDLSV YD T+R+A+ +VQF YG DGMDP
Sbjct: 850 MGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASSGIVQFVYGDDGMDPVK 909
Query: 252 LEGK 241
+EGK
Sbjct: 910 MEGK 913
Score = 60.1 bits (144), Expect(2) = 3e-28
Identities = 32/81 (39%), Positives = 54/81 (66%)
Frame = -1
Query: 245 ERMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRIR 66
+++F KVKAT H +LS I++ ++ +LS+ ++ G S KFK+ L KFF +RI+
Sbjct: 921 DQLFMKVKATCPQRGHDMLSPEAIMQMLNDKLSEQDMS-SGGCSDKFKELLTKFFEDRIK 979
Query: 65 SLRNTRKLLNIDEQNVDKEES 3
LR+TR+ L++DE +V ++S
Sbjct: 980 MLRSTRRTLHLDEDHVGMKDS 1000
>ref|XP_008803030.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Phoenix
dactylifera]
Length = 1018
Score = 98.6 bits (244), Expect(2) = 3e-28
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTA+TG MSRRL+K LEDLS+ YD T+R+ANG +VQF YG DGMDPA
Sbjct: 482 MGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQTVRTANGSIVQFVYGDDGMDPAK 541
Query: 252 LEGKN 238
+EGK+
Sbjct: 542 MEGKD 546
Score = 53.1 bits (126), Expect(2) = 3e-28
Identities = 30/81 (37%), Positives = 43/81 (53%)
Frame = -1
Query: 245 ERMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRIR 66
+++F KV AT LS +EIL +D LSKY T +G S FK L F +
Sbjct: 553 DQLFMKVMATCPLREQDTLSPAEILHTLDDRLSKYDTTPEGGCSAAFKKMLSDFLHKHAA 612
Query: 65 SLRNTRKLLNIDEQNVDKEES 3
+ N R+ L +DE +V K++S
Sbjct: 613 AFSNIRRALQLDENHVQKKDS 633
>gb|EMS65535.1| DNA-directed RNA polymerase III subunit RPC1 [Triticum urartu]
Length = 689
Score = 94.0 bits (232), Expect(2) = 6e-28
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTA+TG MSRRL+K LEDLSV YD T+R+A+G +VQF YG DGMDP
Sbjct: 190 MGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFVYGDDGMDPVK 249
Query: 252 LEGK 241
+EGK
Sbjct: 250 MEGK 253
Score = 57.0 bits (136), Expect(2) = 6e-28
Identities = 33/81 (40%), Positives = 48/81 (59%)
Frame = -1
Query: 245 ERMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRIR 66
+++F KV AT H LS IL+ + +LS+ + G S KFK+ L KFF +RI+
Sbjct: 261 DQLFMKVMATCPQRGHDTLSPELILQMFNDKLSRQDAS-SGGCSDKFKEMLTKFFEDRIK 319
Query: 65 SLRNTRKLLNIDEQNVDKEES 3
LR+TR+ L +DE V K +S
Sbjct: 320 MLRSTRRALQLDEDRVGKRDS 340
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Setaria
italica]
Length = 1397
Score = 95.9 bits (237), Expect(2) = 8e-28
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTA+TG MSRRL+K LEDLSV YD T+R+A+G +VQF YG DGMDPA
Sbjct: 856 MGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPAK 915
Query: 252 LEGKN 238
+EGK+
Sbjct: 916 MEGKD 920
Score = 54.7 bits (130), Expect(2) = 8e-28
Identities = 29/81 (35%), Positives = 51/81 (62%)
Frame = -1
Query: 245 ERMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRIR 66
+++F KV AT LS +I + ++ +L++++ + DG S +FK+ L KF RI+
Sbjct: 927 DQLFMKVTATCPHRGLDTLSPDDIKQMLEDKLTQHKTSSDGGCSEEFKECLKKFLEERIQ 986
Query: 65 SLRNTRKLLNIDEQNVDKEES 3
L+ TRK L++DE++V K +S
Sbjct: 987 LLKCTRKALHLDEKHVGKNDS 1007
>gb|KQK97866.1| hypothetical protein SETIT_009186mg [Setaria italica]
Length = 1394
Score = 95.9 bits (237), Expect(2) = 8e-28
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTA+TG MSRRL+K LEDLSV YD T+R+A+G +VQF YG DGMDPA
Sbjct: 853 MGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPAK 912
Query: 252 LEGKN 238
+EGK+
Sbjct: 913 MEGKD 917
Score = 54.7 bits (130), Expect(2) = 8e-28
Identities = 29/81 (35%), Positives = 51/81 (62%)
Frame = -1
Query: 245 ERMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRIR 66
+++F KV AT LS +I + ++ +L++++ + DG S +FK+ L KF RI+
Sbjct: 924 DQLFMKVTATCPHRGLDTLSPDDIKQMLEDKLTQHKTSSDGGCSEEFKECLKKFLEERIQ 983
Query: 65 SLRNTRKLLNIDEQNVDKEES 3
L+ TRK L++DE++V K +S
Sbjct: 984 LLKCTRKALHLDEKHVGKNDS 1004
>gb|KQJ92762.1| hypothetical protein BRADI_3g00507 [Brachypodium distachyon]
Length = 1409
Score = 94.4 bits (233), Expect(2) = 2e-27
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTADTG +SRRL+K LEDLSV YD T+R+A+G +VQF YG DGMDP
Sbjct: 862 MGGREGLVDTAVKTADTGYLSRRLMKGLEDLSVFYDQTVRNASGGIVQFVYGDDGMDPVK 921
Query: 252 LEGK 241
+EGK
Sbjct: 922 MEGK 925
Score = 54.7 bits (130), Expect(2) = 2e-27
Identities = 32/81 (39%), Positives = 47/81 (58%)
Frame = -1
Query: 245 ERMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRIR 66
+++F KVKAT H LS IL+ + L K T G S K K+ L KF +R++
Sbjct: 933 DQLFMKVKATCPQRGHDTLSPDVILQMFNDTLFKQE-TSSGRCSDKLKEMLTKFLEDRVK 991
Query: 65 SLRNTRKLLNIDEQNVDKEES 3
LR+TR+ L+IDE +V + +S
Sbjct: 992 MLRSTRRALHIDEDHVGRRDS 1012
>gb|KQJ92760.1| hypothetical protein BRADI_3g00507 [Brachypodium distachyon]
gi|944057171|gb|KQJ92761.1| hypothetical protein
BRADI_3g00507 [Brachypodium distachyon]
Length = 1400
Score = 94.4 bits (233), Expect(2) = 2e-27
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTADTG +SRRL+K LEDLSV YD T+R+A+G +VQF YG DGMDP
Sbjct: 853 MGGREGLVDTAVKTADTGYLSRRLMKGLEDLSVFYDQTVRNASGGIVQFVYGDDGMDPVK 912
Query: 252 LEGK 241
+EGK
Sbjct: 913 MEGK 916
Score = 54.7 bits (130), Expect(2) = 2e-27
Identities = 32/81 (39%), Positives = 47/81 (58%)
Frame = -1
Query: 245 ERMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRIR 66
+++F KVKAT H LS IL+ + L K T G S K K+ L KF +R++
Sbjct: 924 DQLFMKVKATCPQRGHDTLSPDVILQMFNDTLFKQE-TSSGRCSDKLKEMLTKFLEDRVK 982
Query: 65 SLRNTRKLLNIDEQNVDKEES 3
LR+TR+ L+IDE +V + +S
Sbjct: 983 MLRSTRRALHIDEDHVGRRDS 1003
>ref|XP_010236212.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1382
Score = 94.4 bits (233), Expect(2) = 2e-27
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTADTG +SRRL+K LEDLSV YD T+R+A+G +VQF YG DGMDP
Sbjct: 835 MGGREGLVDTAVKTADTGYLSRRLMKGLEDLSVFYDQTVRNASGGIVQFVYGDDGMDPVK 894
Query: 252 LEGK 241
+EGK
Sbjct: 895 MEGK 898
Score = 54.7 bits (130), Expect(2) = 2e-27
Identities = 32/81 (39%), Positives = 47/81 (58%)
Frame = -1
Query: 245 ERMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRIR 66
+++F KVKAT H LS IL+ + L K T G S K K+ L KF +R++
Sbjct: 906 DQLFMKVKATCPQRGHDTLSPDVILQMFNDTLFKQE-TSSGRCSDKLKEMLTKFLEDRVK 964
Query: 65 SLRNTRKLLNIDEQNVDKEES 3
LR+TR+ L+IDE +V + +S
Sbjct: 965 MLRSTRRALHIDEDHVGRRDS 985
>gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Triticum urartu]
Length = 1248
Score = 94.0 bits (232), Expect(2) = 3e-27
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTA+TG MSRRL+K LEDLSV YD T+R+A+G +VQF YG DGMDP
Sbjct: 699 MGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFVYGDDGMDPVK 758
Query: 252 LEGK 241
+EGK
Sbjct: 759 MEGK 762
Score = 54.7 bits (130), Expect(2) = 3e-27
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = -1
Query: 245 ERMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRIR 66
+++F KV AT H LS I + ++ +LS+ + G S +FK+ L KF NRI+
Sbjct: 770 DQLFMKVMATCPQRGHETLSPEAISQMLNDKLSEQDPSAGG-CSDRFKELLTKFVGNRIK 828
Query: 65 SLRNTRKLLNIDEQNVDKEES 3
LRNTR+ L++DE +V +++S
Sbjct: 829 MLRNTRRALHLDEDHVGRKDS 849
>gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
Length = 1117
Score = 94.0 bits (232), Expect(2) = 3e-27
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -3
Query: 432 MGGREGLIYTTVKTADTGDMSRRLVKALEDLSVQYDNTIRSANGDVVQFHYGGDGMDPAI 253
MGGREGL+ T VKTA+TG MSRRL+K LEDLSV YD T+R+A+G +VQF YG DGMDP
Sbjct: 568 MGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFVYGDDGMDPVK 627
Query: 252 LEGK 241
+EGK
Sbjct: 628 MEGK 631
Score = 54.7 bits (130), Expect(2) = 3e-27
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = -1
Query: 245 ERMFSKVKATFSSGAHAILSSSEILRYVDVELSKYRLTLDGDYSVKFKDSLIKFFNNRIR 66
+++F KV AT H LS I + ++ +LS+ + G S +FK+ L KF NRI+
Sbjct: 639 DQLFMKVMATCPQRGHETLSPEAISQMLNDKLSEQDPSAGG-CSDRFKELLTKFVGNRIK 697
Query: 65 SLRNTRKLLNIDEQNVDKEES 3
LRNTR+ L++DE +V +++S
Sbjct: 698 MLRNTRRALHLDEDHVGRKDS 718