BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00007210
         (1390 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007042088.1| RNA-binding family protein, putative [Theobr...   452   e-124
gb|KHG15251.1| RNA-binding 28 [Gossypium arboreum]                    447   e-122
ref|XP_006423392.1| hypothetical protein CICLE_v10027768mg [Citr...   446   e-122
ref|XP_006423391.1| hypothetical protein CICLE_v10027768mg [Citr...   446   e-122
ref|XP_006487346.1| PREDICTED: RNA-binding protein 28-like isofo...   445   e-122
ref|XP_006487344.1| PREDICTED: RNA-binding protein 28-like isofo...   445   e-122
ref|XP_011047760.1| PREDICTED: RNA-binding protein 28 isoform X1...   444   e-122
ref|XP_012463899.1| PREDICTED: RNA-binding protein 28 [Gossypium...   443   e-121
ref|XP_011047769.1| PREDICTED: RNA-binding protein 28 isoform X2...   443   e-121
gb|KJB79121.1| hypothetical protein B456_013G034200 [Gossypium r...   442   e-121
ref|XP_011047777.1| PREDICTED: RNA-binding protein 28 isoform X3...   442   e-121
ref|XP_011047784.1| PREDICTED: RNA-binding protein 28 isoform X4...   442   e-121
ref|XP_010254677.1| PREDICTED: RNA-binding protein 28 isoform X1...   439   e-120
ref|XP_010647689.1| PREDICTED: RNA-binding protein 28 isoform X2...   439   e-120
emb|CBI38027.3| unnamed protein product [Vitis vinifera]              439   e-120
ref|XP_010647688.1| PREDICTED: RNA-binding protein 28 isoform X1...   437   e-119
ref|XP_002313773.2| RNA recognition motif-containing family prot...   436   e-119
ref|XP_010254678.1| PREDICTED: RNA-binding protein 28 isoform X2...   436   e-119
ref|XP_012067208.1| PREDICTED: RNA-binding protein 28 [Jatropha ...   435   e-119
gb|KJB79122.1| hypothetical protein B456_013G034200 [Gossypium r...   431   e-118

>ref|XP_007042088.1| RNA-binding family protein, putative [Theobroma cacao]
            gi|508706023|gb|EOX97919.1| RNA-binding family protein,
            putative [Theobroma cacao]
          Length = 953

 Score =  452 bits (1162), Expect = e-124
 Identities = 231/369 (62%), Positives = 278/369 (75%), Gaps = 2/369 (0%)
 Frame = -3

Query: 1289 MGNKKKPTTN--EEHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRG 1116
            MG KK+       EHSPST+FV+NLPYSFTN+QLEE+F DVGP+RRCFMVT+KGS  HRG
Sbjct: 1    MGKKKRSEKRPESEHSPSTVFVTNLPYSFTNSQLEETFSDVGPIRRCFMVTKKGSTEHRG 60

Query: 1115 FGFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRVD 936
            FGFV FAV EDA+RAI+LKNG+S+ GRKI VKHA+HR   EQR +K   T  D  KT   
Sbjct: 61   FGFVQFAVTEDANRAIDLKNGSSIGGRKIGVKHAMHRAPLEQRRSKA--TQDDGTKT--- 115

Query: 935  IQEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDKEEC 756
                           K+D+ G +ST    E      +L K    +KA+ L  DL+DKE C
Sbjct: 116  ---------------KDDKDGFTSTV--NEHGSNPPKLEKPVQPRKAATLCADLADKENC 158

Query: 755  SGKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCKMDT 576
            SGKQRVARTVIFGGL  ++M E+V R A+  G VC++T   PKEEL  +GL+QDGCKMD 
Sbjct: 159  SGKQRVARTVIFGGLLNNEMAEDVHRCAKESGTVCAVTYPLPKEELERHGLAQDGCKMDA 218

Query: 575  AAVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVPEIK 396
            +AVL+ S+K+ARA V++LH+KEI+GG+VWARQLGGEGSKT+KWK+I+RNLP+K  V EI+
Sbjct: 219  SAVLFTSIKSARAVVAMLHQKEIQGGIVWARQLGGEGSKTQKWKIIIRNLPYKAKVNEIR 278

Query: 395  DMFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVDWAV 216
            DMFSSAGFVWD+FIP+NSETGLSKGFAFVKFTCK DAENAIQK NG+   KRPIAVDWAV
Sbjct: 279  DMFSSAGFVWDVFIPYNSETGLSKGFAFVKFTCKQDAENAIQKFNGQKFAKRPIAVDWAV 338

Query: 215  SKKVYTAGA 189
             KK+Y+ GA
Sbjct: 339  PKKLYSGGA 347


>gb|KHG15251.1| RNA-binding 28 [Gossypium arboreum]
          Length = 956

 Score =  447 bits (1150), Expect = e-122
 Identities = 236/377 (62%), Positives = 277/377 (73%), Gaps = 2/377 (0%)
 Frame = -3

Query: 1289 MGNKKKPTTNEE--HSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRG 1116
            MG  K+     E  HSP+T+FV+NLPYSFTN+QLEE+F DVGP+RRCFMVT+KGS  HRG
Sbjct: 1    MGKNKRSDKRPEFDHSPATVFVTNLPYSFTNSQLEETFSDVGPIRRCFMVTKKGSTEHRG 60

Query: 1115 FGFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRVD 936
              FV FAVAEDA+RAIELKNG+SV GRKI VKHA+HR S EQR +K   T  D  KT   
Sbjct: 61   IAFVQFAVAEDANRAIELKNGSSVGGRKIGVKHAMHRASLEQRLSKA--TQDDATKT--- 115

Query: 935  IQEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDKEEC 756
                           K D  G+ ++AV E       +L K    KKA+ L  DL+DKE C
Sbjct: 116  ---------------KNDNNGLLTSAV-EAHGSDLPKLAKPVQPKKAATLCSDLADKENC 159

Query: 755  SGKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCKMDT 576
            S KQRVARTVIFGGL+  +M E+V RRA+ +G VC++T   PKEEL  +GL+QDGCKMD 
Sbjct: 160  SEKQRVARTVIFGGLRNAEMAEDVHRRAKEIGTVCAVTYPLPKEELEEHGLAQDGCKMDA 219

Query: 575  AAVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVPEIK 396
            +AVL+ SVK A  AV++LH+KEI G +VWARQLGGEGSKT+KWKLI+RNL FK  + EIK
Sbjct: 220  SAVLFTSVKLAHTAVAMLHQKEIHGSIVWARQLGGEGSKTQKWKLIIRNLSFKAKLSEIK 279

Query: 395  DMFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVDWAV 216
            DMFS+AGFVWD+FIPHNSETGLSKGFAFVKFT K DAENAIQK NGKT+ KRPIAVDWAV
Sbjct: 280  DMFSAAGFVWDVFIPHNSETGLSKGFAFVKFTSKQDAENAIQKFNGKTLCKRPIAVDWAV 339

Query: 215  SKKVYTAGAKTDSTIDE 165
             KK+Y AG  T  T D+
Sbjct: 340  PKKLYGAGGNTAVTSDD 356



 Score = 60.5 bits (145), Expect = 3e-06
 Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 5/160 (3%)
 Frame = -3

Query: 1274 KPTTNEEHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRGFGFVHFA 1095
            K   +EE    T+F+SNLP+   N +++E F   G V+    V    +   RG GF+ F 
Sbjct: 477  KQIDSEEELQRTVFISNLPFDIDNKEVKERFSGFGEVQSFIPVLHPVTKRPRGTGFLKFK 536

Query: 1094 VAEDADRAIELKNGAS-----VDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRVDIQ 930
              + A  A+   N +S     + GR+I+V  AL R S   +  + A+  + +++     +
Sbjct: 537  TIDAATAAVSAANASSGLGIFLKGRQIKVLKALDRKSAHDKELEKAKAEEHDLRNLYLAK 596

Query: 929  EASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLK 810
            E   + V    A K+    VS++ + + Q L + ++ KL+
Sbjct: 597  E--GLIVEGTSAAKD----VSASDMEKRQMLHEKKMTKLQ 630


>ref|XP_006423392.1| hypothetical protein CICLE_v10027768mg [Citrus clementina]
            gi|557525326|gb|ESR36632.1| hypothetical protein
            CICLE_v10027768mg [Citrus clementina]
          Length = 933

 Score =  446 bits (1146), Expect = e-122
 Identities = 228/369 (61%), Positives = 279/369 (75%), Gaps = 3/369 (0%)
 Frame = -3

Query: 1289 MGNKKKPTTNE--EHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRG 1116
            MG  KK    E  EHSPST+FV+NLPYSFTN+QLEE+F DVGP+RRCFMVT+KGS+ HRG
Sbjct: 1    MGKNKKNRGGEKSEHSPSTVFVNNLPYSFTNSQLEEAFSDVGPIRRCFMVTKKGSNEHRG 60

Query: 1115 FGFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAK-TAETNKDNIKTRV 939
            FG+V FAV EDA+RA+E+KNG SV GRKI VKHA+HR S EQR +K T E   D+I+  +
Sbjct: 61   FGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEVQADDIEKTM 120

Query: 938  DIQEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDKEE 759
            D               K+D +  +     E+ + +  E GK    +KA+ L IDL+DKE+
Sbjct: 121  D--------------NKDDVISGA-----EKHSSKLLESGKTVKPRKAATLGIDLADKED 161

Query: 758  CSGKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCKMD 579
            CS KQRVARTVI GGL   DM EEV R A ++G VCS+T   PKEEL  +GL+Q+GCKMD
Sbjct: 162  CSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMD 221

Query: 578  TAAVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVPEI 399
             +AVLY +VK+A A+V+LLH+KEIKGG VWARQLGGEGSKT+KWKLI+RN+PFK  V EI
Sbjct: 222  ASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEI 281

Query: 398  KDMFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVDWA 219
            KDMFS  G VW+++IPHN++TGLSKGFAFVKFTCK DAE+AIQK NG+  GKRPIAVDWA
Sbjct: 282  KDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA 341

Query: 218  VSKKVYTAG 192
            V K +Y++G
Sbjct: 342  VPKNIYSSG 350


>ref|XP_006423391.1| hypothetical protein CICLE_v10027768mg [Citrus clementina]
            gi|557525325|gb|ESR36631.1| hypothetical protein
            CICLE_v10027768mg [Citrus clementina]
          Length = 710

 Score =  446 bits (1146), Expect = e-122
 Identities = 228/369 (61%), Positives = 279/369 (75%), Gaps = 3/369 (0%)
 Frame = -3

Query: 1289 MGNKKKPTTNE--EHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRG 1116
            MG  KK    E  EHSPST+FV+NLPYSFTN+QLEE+F DVGP+RRCFMVT+KGS+ HRG
Sbjct: 1    MGKNKKNRGGEKSEHSPSTVFVNNLPYSFTNSQLEEAFSDVGPIRRCFMVTKKGSNEHRG 60

Query: 1115 FGFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAK-TAETNKDNIKTRV 939
            FG+V FAV EDA+RA+E+KNG SV GRKI VKHA+HR S EQR +K T E   D+I+  +
Sbjct: 61   FGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEVQADDIEKTM 120

Query: 938  DIQEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDKEE 759
            D               K+D +  +     E+ + +  E GK    +KA+ L IDL+DKE+
Sbjct: 121  D--------------NKDDVISGA-----EKHSSKLLESGKTVKPRKAATLGIDLADKED 161

Query: 758  CSGKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCKMD 579
            CS KQRVARTVI GGL   DM EEV R A ++G VCS+T   PKEEL  +GL+Q+GCKMD
Sbjct: 162  CSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMD 221

Query: 578  TAAVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVPEI 399
             +AVLY +VK+A A+V+LLH+KEIKGG VWARQLGGEGSKT+KWKLI+RN+PFK  V EI
Sbjct: 222  ASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIIRNIPFKAKVNEI 281

Query: 398  KDMFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVDWA 219
            KDMFS  G VW+++IPHN++TGLSKGFAFVKFTCK DAE+AIQK NG+  GKRPIAVDWA
Sbjct: 282  KDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA 341

Query: 218  VSKKVYTAG 192
            V K +Y++G
Sbjct: 342  VPKNIYSSG 350


>ref|XP_006487346.1| PREDICTED: RNA-binding protein 28-like isoform X3 [Citrus sinensis]
          Length = 933

 Score =  445 bits (1144), Expect = e-122
 Identities = 230/369 (62%), Positives = 279/369 (75%), Gaps = 3/369 (0%)
 Frame = -3

Query: 1289 MGNKKKPTTNE--EHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRG 1116
            MG  KK    E  EHSPST+FV+NLPYSFTN+QLEE+F DVGP+RRCFMVT+KGS+ HRG
Sbjct: 1    MGKNKKNRGGEKSEHSPSTVFVNNLPYSFTNSQLEEAFSDVGPIRRCFMVTKKGSNEHRG 60

Query: 1115 FGFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAK-TAETNKDNIKTRV 939
            FG+V FAV EDA+RA+E+KNG SV GRKI VKHA+HR S EQR +K T E   ++I+  +
Sbjct: 61   FGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEVQAEDIEKTM 120

Query: 938  DIQEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDKEE 759
            D ++                 GV S A  E+ + +  E GK    +KA+ L IDL+DKE 
Sbjct: 121  DNKD-----------------GVISGA--EKHSSKLLESGKTVKPRKAATLGIDLADKEN 161

Query: 758  CSGKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCKMD 579
            CS KQRVARTVI GGL   DM EEV R A ++G VCS+T   PKEEL  +GL+Q+GCKMD
Sbjct: 162  CSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMD 221

Query: 578  TAAVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVPEI 399
             +AVLY +VK+A A+V+LLH+KEIKGG VWARQLGGEGSKT+KWKLIVRN+PFK  V EI
Sbjct: 222  ASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIVRNIPFKAKVNEI 281

Query: 398  KDMFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVDWA 219
            KDMFS  G VW+++IPHN++TGLSKGFAFVKFTCK DAE+AIQK NG+  GKRPIAVDWA
Sbjct: 282  KDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA 341

Query: 218  VSKKVYTAG 192
            V K +Y++G
Sbjct: 342  VPKNIYSSG 350


>ref|XP_006487344.1| PREDICTED: RNA-binding protein 28-like isoform X1 [Citrus sinensis]
            gi|568868077|ref|XP_006487345.1| PREDICTED: RNA-binding
            protein 28-like isoform X2 [Citrus sinensis]
          Length = 938

 Score =  445 bits (1144), Expect = e-122
 Identities = 230/369 (62%), Positives = 279/369 (75%), Gaps = 3/369 (0%)
 Frame = -3

Query: 1289 MGNKKKPTTNE--EHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRG 1116
            MG  KK    E  EHSPST+FV+NLPYSFTN+QLEE+F DVGP+RRCFMVT+KGS+ HRG
Sbjct: 1    MGKNKKNRGGEKSEHSPSTVFVNNLPYSFTNSQLEEAFSDVGPIRRCFMVTKKGSNEHRG 60

Query: 1115 FGFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAK-TAETNKDNIKTRV 939
            FG+V FAV EDA+RA+E+KNG SV GRKI VKHA+HR S EQR +K T E   ++I+  +
Sbjct: 61   FGYVQFAVMEDANRAVEMKNGTSVGGRKIGVKHAMHRASLEQRRSKVTQEVQAEDIEKTM 120

Query: 938  DIQEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDKEE 759
            D ++                 GV S A  E+ + +  E GK    +KA+ L IDL+DKE 
Sbjct: 121  DNKD-----------------GVISGA--EKHSSKLLESGKTVKPRKAATLGIDLADKEN 161

Query: 758  CSGKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCKMD 579
            CS KQRVARTVI GGL   DM EEV R A ++G VCS+T   PKEEL  +GL+Q+GCKMD
Sbjct: 162  CSQKQRVARTVIIGGLLNADMAEEVHRLAGSIGTVCSVTYPLPKEELEQHGLAQEGCKMD 221

Query: 578  TAAVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVPEI 399
             +AVLY +VK+A A+V+LLH+KEIKGG VWARQLGGEGSKT+KWKLIVRN+PFK  V EI
Sbjct: 222  ASAVLYTTVKSACASVALLHQKEIKGGTVWARQLGGEGSKTQKWKLIVRNIPFKAKVNEI 281

Query: 398  KDMFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVDWA 219
            KDMFS  G VW+++IPHN++TGLSKGFAFVKFTCK DAE+AIQK NG+  GKRPIAVDWA
Sbjct: 282  KDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKFTCKRDAESAIQKFNGQKFGKRPIAVDWA 341

Query: 218  VSKKVYTAG 192
            V K +Y++G
Sbjct: 342  VPKNIYSSG 350


>ref|XP_011047760.1| PREDICTED: RNA-binding protein 28 isoform X1 [Populus euphratica]
          Length = 843

 Score =  444 bits (1143), Expect = e-122
 Identities = 227/378 (60%), Positives = 276/378 (73%), Gaps = 5/378 (1%)
 Frame = -3

Query: 1277 KKPTTNE-----EHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRGF 1113
            KK  T+E     EHS ST+FVS LPYSFTN+QLEE+F DVGP+RRCFMVTQKGS  HRGF
Sbjct: 3    KKKNTHESGSASEHSSSTLFVSGLPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEHRGF 62

Query: 1112 GFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRVDI 933
            GFV FA+ +DA+RAIE+KNG+SV GRKI VKHA+HR S EQR AK A+           +
Sbjct: 63   GFVQFALKDDANRAIEIKNGSSVGGRKIAVKHAMHRASLEQRRAKAAQGQGQ-------V 115

Query: 932  QEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDKEECS 753
            Q    V    +  +  D+ G S  +  E+  L   E GK +  +K + L  DL+DKE CS
Sbjct: 116  QGQYHVVYSDDATKTMDDKG-SVASKPEKHVLNVLESGKPREPRKPAKLVTDLTDKENCS 174

Query: 752  GKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCKMDTA 573
             KQRVARTVIFGGL    M E+V +RA+  G VCS+T   PKEEL  +GL QDGC+   +
Sbjct: 175  EKQRVARTVIFGGLLNDAMAEDVHQRAKETGTVCSVTYPLPKEELKKHGLEQDGCRSGAS 234

Query: 572  AVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVPEIKD 393
            AVL+ SVK AR+ V++LH+KEIKGG+VWARQLGGEG KT+KWKLI+RNLPFK    EIKD
Sbjct: 235  AVLFTSVKEARSCVAMLHQKEIKGGIVWARQLGGEGCKTQKWKLIIRNLPFKAKPNEIKD 294

Query: 392  MFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVDWAVS 213
            +F SAGFVWD+F+PHNSETGLS+GFAFVKFTCK DAENAIQK NG+  GKRPIAVDWAV 
Sbjct: 295  VFESAGFVWDVFVPHNSETGLSRGFAFVKFTCKQDAENAIQKFNGQKFGKRPIAVDWAVP 354

Query: 212  KKVYTAGAKTDSTIDESN 159
            KK+Y++GA   +  ++ +
Sbjct: 355  KKIYSSGANVPAASEDGH 372


>ref|XP_012463899.1| PREDICTED: RNA-binding protein 28 [Gossypium raimondii]
            gi|763812268|gb|KJB79120.1| hypothetical protein
            B456_013G034200 [Gossypium raimondii]
          Length = 956

 Score =  443 bits (1140), Expect = e-121
 Identities = 233/377 (61%), Positives = 278/377 (73%), Gaps = 2/377 (0%)
 Frame = -3

Query: 1289 MGNKKKPTTNEE--HSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRG 1116
            MG  K+     E  HSP+T+FV+NL YSFTN+QLEE+F DVGP+RRCFMVT+KGS  HRG
Sbjct: 1    MGKNKRSDKRPESDHSPATVFVTNLAYSFTNSQLEETFSDVGPIRRCFMVTKKGSTEHRG 60

Query: 1115 FGFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRVD 936
              FV FAVAEDA+RAIELKNG+SV GRKI VKHA+HR S EQR +K   T  D  KT   
Sbjct: 61   IAFVQFAVAEDANRAIELKNGSSVGGRKIGVKHAMHRASLEQRRSKA--TQDDATKT--- 115

Query: 935  IQEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDKEEC 756
                           K D+ G+ ++AV E       +L K    KKA+ L  DL+DKE C
Sbjct: 116  ---------------KNDKDGLLTSAV-EAHGSDLPKLEKPVQPKKAATLCSDLADKENC 159

Query: 755  SGKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCKMDT 576
            S KQRVARTV+FGGL+  +M E+V R A+ +G VC++T   PKEEL  +GL+QDGCKMD 
Sbjct: 160  SEKQRVARTVVFGGLRNAEMAEDVHRLAKEIGTVCAVTYPLPKEELEEHGLAQDGCKMDA 219

Query: 575  AAVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVPEIK 396
            +AVL+ SVK+A  AV++LH+KEI G +VWARQLGGEGSKT+KWKLI+RNL FK  + EIK
Sbjct: 220  SAVLFTSVKSAHTAVAMLHQKEIHGSIVWARQLGGEGSKTQKWKLIIRNLSFKAKLSEIK 279

Query: 395  DMFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVDWAV 216
            DMFS+AGFVWD+FIPHNSETGLSKGFAFVKFT K DAENAIQK NGKT+ KRPIAVDWAV
Sbjct: 280  DMFSAAGFVWDVFIPHNSETGLSKGFAFVKFTSKQDAENAIQKFNGKTLCKRPIAVDWAV 339

Query: 215  SKKVYTAGAKTDSTIDE 165
             KK+Y+AG  T  T D+
Sbjct: 340  PKKLYSAGGNTAVTSDD 356



 Score = 63.5 bits (153), Expect = 4e-07
 Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
 Frame = -3

Query: 1274 KPTTNEEHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRGFGFVHFA 1095
            K   +EE    T+F+SNLP+   N +++E F   G V+    V    +   RG GF+ F 
Sbjct: 477  KQIDSEEELQRTVFISNLPFDIDNKEVKERFSGFGEVQSFIPVLHPVTKRPRGTGFLKFK 536

Query: 1094 VAEDADRAIELKNGAS-----VDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRVDIQ 930
              + A  A+   N +S     + GR+I+V  AL R S   +  + A+  + +++     +
Sbjct: 537  TIDAATAAVSAANASSGLGIFLKGRQIKVLKALDRKSAHDKELEKAKAEEHDLRNLYLAK 596

Query: 929  EASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLK 810
            E   + V   PA K+    VS++ + + Q L + ++ KL+
Sbjct: 597  E--GLIVEGTPAAKD----VSASDMEKRQMLHEKKMTKLQ 630


>ref|XP_011047769.1| PREDICTED: RNA-binding protein 28 isoform X2 [Populus euphratica]
          Length = 842

 Score =  443 bits (1139), Expect = e-121
 Identities = 227/378 (60%), Positives = 274/378 (72%), Gaps = 5/378 (1%)
 Frame = -3

Query: 1277 KKPTTNE-----EHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRGF 1113
            KK  T+E     EHS ST+FVS LPYSFTN+QLEE+F DVGP+RRCFMVTQKGS  HRGF
Sbjct: 3    KKKNTHESGSASEHSSSTLFVSGLPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEHRGF 62

Query: 1112 GFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRVDI 933
            GFV FA+ +DA+RAIE+KNG+SV GRKI VKHA+HR S EQR AK A+            
Sbjct: 63   GFVQFALKDDANRAIEIKNGSSVGGRKIAVKHAMHRASLEQRRAKAAQGQG--------- 113

Query: 932  QEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDKEECS 753
            Q      V  + A K  +   S  +  E+  L   E GK +  +K + L  DL+DKE CS
Sbjct: 114  QVQGQFVVYSDDATKTMDDKGSVASKPEKHVLNVLESGKPREPRKPAKLVTDLTDKENCS 173

Query: 752  GKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCKMDTA 573
             KQRVARTVIFGGL    M E+V +RA+  G VCS+T   PKEEL  +GL QDGC+   +
Sbjct: 174  EKQRVARTVIFGGLLNDAMAEDVHQRAKETGTVCSVTYPLPKEELKKHGLEQDGCRSGAS 233

Query: 572  AVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVPEIKD 393
            AVL+ SVK AR+ V++LH+KEIKGG+VWARQLGGEG KT+KWKLI+RNLPFK    EIKD
Sbjct: 234  AVLFTSVKEARSCVAMLHQKEIKGGIVWARQLGGEGCKTQKWKLIIRNLPFKAKPNEIKD 293

Query: 392  MFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVDWAVS 213
            +F SAGFVWD+F+PHNSETGLS+GFAFVKFTCK DAENAIQK NG+  GKRPIAVDWAV 
Sbjct: 294  VFESAGFVWDVFVPHNSETGLSRGFAFVKFTCKQDAENAIQKFNGQKFGKRPIAVDWAVP 353

Query: 212  KKVYTAGAKTDSTIDESN 159
            KK+Y++GA   +  ++ +
Sbjct: 354  KKIYSSGANVPAASEDGH 371


>gb|KJB79121.1| hypothetical protein B456_013G034200 [Gossypium raimondii]
          Length = 947

 Score =  442 bits (1138), Expect = e-121
 Identities = 232/379 (61%), Positives = 281/379 (74%), Gaps = 2/379 (0%)
 Frame = -3

Query: 1289 MGNKKKPTTNEE--HSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRG 1116
            MG  K+     E  HSP+T+FV+NL YSFTN+QLEE+F DVGP+RRCFMVT+KGS  HRG
Sbjct: 1    MGKNKRSDKRPESDHSPATVFVTNLAYSFTNSQLEETFSDVGPIRRCFMVTKKGSTEHRG 60

Query: 1115 FGFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRVD 936
              FV FAVAEDA+RAIELKNG+SV GRKI VKHA+HR S EQR +K   T  D  KT   
Sbjct: 61   IAFVQFAVAEDANRAIELKNGSSVGGRKIGVKHAMHRASLEQRRSKA--TQDDATKT--- 115

Query: 935  IQEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDKEEC 756
                           K D+ G+ ++AV E       +L K    KKA+ L  DL+DKE C
Sbjct: 116  ---------------KNDKDGLLTSAV-EAHGSDLPKLEKPVQPKKAATLCSDLADKENC 159

Query: 755  SGKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCKMDT 576
            S KQRVARTV+FGGL+  +M E+V R A+ +G VC++T   PKEEL  +GL+QDGCKMD 
Sbjct: 160  SEKQRVARTVVFGGLRNAEMAEDVHRLAKEIGTVCAVTYPLPKEELEEHGLAQDGCKMDA 219

Query: 575  AAVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVPEIK 396
            +AVL+ SVK+A  AV++LH+KEI G +VWARQLGGEGSKT+KWKLI+RNL FK  + EIK
Sbjct: 220  SAVLFTSVKSAHTAVAMLHQKEIHGSIVWARQLGGEGSKTQKWKLIIRNLSFKAKLSEIK 279

Query: 395  DMFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVDWAV 216
            DMFS+AGFVWD+FIPHNSETGLSKGFAFVKFT K DAENAIQK NGKT+ KRPIAVDWAV
Sbjct: 280  DMFSAAGFVWDVFIPHNSETGLSKGFAFVKFTSKQDAENAIQKFNGKTLCKRPIAVDWAV 339

Query: 215  SKKVYTAGAKTDSTIDESN 159
             KK+Y+AG + ++  +ES+
Sbjct: 340  PKKLYSAGGQLNNKEEESD 358



 Score = 63.5 bits (153), Expect = 4e-07
 Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
 Frame = -3

Query: 1274 KPTTNEEHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRGFGFVHFA 1095
            K   +EE    T+F+SNLP+   N +++E F   G V+    V    +   RG GF+ F 
Sbjct: 468  KQIDSEEELQRTVFISNLPFDIDNKEVKERFSGFGEVQSFIPVLHPVTKRPRGTGFLKFK 527

Query: 1094 VAEDADRAIELKNGAS-----VDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRVDIQ 930
              + A  A+   N +S     + GR+I+V  AL R S   +  + A+  + +++     +
Sbjct: 528  TIDAATAAVSAANASSGLGIFLKGRQIKVLKALDRKSAHDKELEKAKAEEHDLRNLYLAK 587

Query: 929  EASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLK 810
            E   + V   PA K+    VS++ + + Q L + ++ KL+
Sbjct: 588  E--GLIVEGTPAAKD----VSASDMEKRQMLHEKKMTKLQ 621


>ref|XP_011047777.1| PREDICTED: RNA-binding protein 28 isoform X3 [Populus euphratica]
          Length = 837

 Score =  442 bits (1138), Expect = e-121
 Identities = 227/378 (60%), Positives = 275/378 (72%), Gaps = 5/378 (1%)
 Frame = -3

Query: 1277 KKPTTNE-----EHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRGF 1113
            KK  T+E     EHS ST+FVS LPYSFTN+QLEE+F DVGP+RRCFMVTQKGS  HRGF
Sbjct: 3    KKKNTHESGSASEHSSSTLFVSGLPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEHRGF 62

Query: 1112 GFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRVDI 933
            GFV FA+ +DA+RAIE+KNG+SV GRKI VKHA+HR S EQR AK A             
Sbjct: 63   GFVQFALKDDANRAIEIKNGSSVGGRKIAVKHAMHRASLEQRRAKAA------------- 109

Query: 932  QEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDKEECS 753
            Q    V  + +  +  D+ G S  +  E+  L   E GK +  +K + L  DL+DKE CS
Sbjct: 110  QGQGQVQGQDDATKTMDDKG-SVASKPEKHVLNVLESGKPREPRKPAKLVTDLTDKENCS 168

Query: 752  GKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCKMDTA 573
             KQRVARTVIFGGL    M E+V +RA+  G VCS+T   PKEEL  +GL QDGC+   +
Sbjct: 169  EKQRVARTVIFGGLLNDAMAEDVHQRAKETGTVCSVTYPLPKEELKKHGLEQDGCRSGAS 228

Query: 572  AVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVPEIKD 393
            AVL+ SVK AR+ V++LH+KEIKGG+VWARQLGGEG KT+KWKLI+RNLPFK    EIKD
Sbjct: 229  AVLFTSVKEARSCVAMLHQKEIKGGIVWARQLGGEGCKTQKWKLIIRNLPFKAKPNEIKD 288

Query: 392  MFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVDWAVS 213
            +F SAGFVWD+F+PHNSETGLS+GFAFVKFTCK DAENAIQK NG+  GKRPIAVDWAV 
Sbjct: 289  VFESAGFVWDVFVPHNSETGLSRGFAFVKFTCKQDAENAIQKFNGQKFGKRPIAVDWAVP 348

Query: 212  KKVYTAGAKTDSTIDESN 159
            KK+Y++GA   +  ++ +
Sbjct: 349  KKIYSSGANVPAASEDGH 366


>ref|XP_011047784.1| PREDICTED: RNA-binding protein 28 isoform X4 [Populus euphratica]
          Length = 835

 Score =  442 bits (1136), Expect = e-121
 Identities = 226/378 (59%), Positives = 275/378 (72%), Gaps = 5/378 (1%)
 Frame = -3

Query: 1277 KKPTTNE-----EHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRGF 1113
            KK  T+E     EHS ST+FVS LPYSFTN+QLEE+F DVGP+RRCFMVTQKGS  HRGF
Sbjct: 3    KKKNTHESGSASEHSSSTLFVSGLPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEHRGF 62

Query: 1112 GFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRVDI 933
            GFV FA+ +DA+RAIE+KNG+SV GRKI VKHA+HR S EQR AK A+            
Sbjct: 63   GFVQFALKDDANRAIEIKNGSSVGGRKIAVKHAMHRASLEQRRAKAAQGQGQ-------- 114

Query: 932  QEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDKEECS 753
                   V+ +  +  D+ G S  +  E+  L   E GK +  +K + L  DL+DKE CS
Sbjct: 115  -------VQDDATKTMDDKG-SVASKPEKHVLNVLESGKPREPRKPAKLVTDLTDKENCS 166

Query: 752  GKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCKMDTA 573
             KQRVARTVIFGGL    M E+V +RA+  G VCS+T   PKEEL  +GL QDGC+   +
Sbjct: 167  EKQRVARTVIFGGLLNDAMAEDVHQRAKETGTVCSVTYPLPKEELKKHGLEQDGCRSGAS 226

Query: 572  AVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVPEIKD 393
            AVL+ SVK AR+ V++LH+KEIKGG+VWARQLGGEG KT+KWKLI+RNLPFK    EIKD
Sbjct: 227  AVLFTSVKEARSCVAMLHQKEIKGGIVWARQLGGEGCKTQKWKLIIRNLPFKAKPNEIKD 286

Query: 392  MFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVDWAVS 213
            +F SAGFVWD+F+PHNSETGLS+GFAFVKFTCK DAENAIQK NG+  GKRPIAVDWAV 
Sbjct: 287  VFESAGFVWDVFVPHNSETGLSRGFAFVKFTCKQDAENAIQKFNGQKFGKRPIAVDWAVP 346

Query: 212  KKVYTAGAKTDSTIDESN 159
            KK+Y++GA   +  ++ +
Sbjct: 347  KKIYSSGANVPAASEDGH 364


>ref|XP_010254677.1| PREDICTED: RNA-binding protein 28 isoform X1 [Nelumbo nucifera]
          Length = 961

 Score =  439 bits (1130), Expect = e-120
 Identities = 234/434 (53%), Positives = 293/434 (67%), Gaps = 2/434 (0%)
 Frame = -3

Query: 1298 LHKMGNKKKPTTNEEHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHR 1119
            + + G   KP  +  HSPSTIFVSNLPYSFTN+QLEE+F +VGP+RRCFMVT+KGS+ HR
Sbjct: 7    MQESGEGLKPKEDSGHSPSTIFVSNLPYSFTNSQLEETFSEVGPIRRCFMVTEKGSNAHR 66

Query: 1118 GFGFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRV 939
            GFGFV FAV EDA+RAIELKNGAS+ GRK+ VKHA+HR   EQR+++  + + +++K + 
Sbjct: 67   GFGFVQFAVMEDANRAIELKNGASIGGRKVVVKHAMHRLPLEQRHSRANQVHMNDVKKKD 126

Query: 938  DIQEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDKEE 759
              +  SS  V++E A K    G S     E   L  H                    K +
Sbjct: 127  GDENFSSRMVKKEHASKLHTKGDSEGTTEEMVVLSDHAY------------------KTD 168

Query: 758  CSGKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCKMD 579
             S KQRVARTVIFGGL   DM EEV RR + VG VCSI+   PKEEL  +GL++DGCKM+
Sbjct: 169  GSEKQRVARTVIFGGLLSVDMAEEVHRRTREVGTVCSISYPLPKEELELHGLAKDGCKMN 228

Query: 578  TAAVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVPEI 399
             ++VLY SVKAARA+V++LH++EIKGG VWARQLGGEGSKTRKW+LIVRNLPFK  V EI
Sbjct: 229  ASSVLYASVKAARASVAMLHQQEIKGGCVWARQLGGEGSKTRKWRLIVRNLPFKAKVNEI 288

Query: 398  KDMFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVDWA 219
            KD+F+SAGFVWD+F+P NS+TGLSKGFAFV FTCK DAENAI+K+NG+ I KRPIAVDWA
Sbjct: 289  KDLFASAGFVWDVFVPLNSKTGLSKGFAFVSFTCKQDAENAIKKVNGQMISKRPIAVDWA 348

Query: 218  VSKKVYTAGAKTDSTIDE--SNXXXXXXXXXXXXXXXXXXXDERTTHLEVEDRISQDTHA 45
            V KK+YT G     T  +   N                    ++ +     + + + +  
Sbjct: 349  VPKKIYTTGGNLVETQTDGAENDRHDESDNSSIDMEGDYAGSDKDSQQVDAEEVQEGSDH 408

Query: 44   TDNRETSNKELDFE 3
             DN E  +KELDF+
Sbjct: 409  IDN-EVHSKELDFD 421


>ref|XP_010647689.1| PREDICTED: RNA-binding protein 28 isoform X2 [Vitis vinifera]
          Length = 953

 Score =  439 bits (1128), Expect = e-120
 Identities = 235/370 (63%), Positives = 273/370 (73%), Gaps = 3/370 (0%)
 Frame = -3

Query: 1289 MGNKKKPT---TNEEHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHR 1119
            MG K K       ++H PST+FVSN PYSFTN+QLEE+F DVGP+RRCFMVTQKGS  HR
Sbjct: 1    MGKKNKTEGGGARDQHCPSTVFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEHR 60

Query: 1118 GFGFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRV 939
            GFGFV FAV EDA+RAIELKNG+S+ GRKI VK A+HR   EQR +K  E   D IKTR 
Sbjct: 61   GFGFVQFAVKEDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSK--ENQDDIIKTRT 118

Query: 938  DIQEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDKEE 759
            + +++SS  V+Q  A              + Q ++KH       ++KA     D +DK  
Sbjct: 119  E-KDSSSEVVKQGHAS-------------DLQEIEKHV-----ELRKALKPCTDQADKGS 159

Query: 758  CSGKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCKMD 579
             S KQRVARTVIFGGL   DM E V  RA+ VG VCS+T   PKEEL ++GLSQDGCK+D
Sbjct: 160  FSEKQRVARTVIFGGLLNADMAEVVHLRAREVGTVCSVTYPLPKEELEHHGLSQDGCKID 219

Query: 578  TAAVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVPEI 399
             +AVLY SVK A A+V++LH+KEIKGG+VWARQLGGEGSKT+KWKLIVRNLPFK  V EI
Sbjct: 220  ASAVLYSSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKWKLIVRNLPFKAKVTEI 279

Query: 398  KDMFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVDWA 219
            KD+FSSAGFVWD FIP NSETGLS+GFAFVKFT K DAENAIQK NG+ IGKRPIAVDWA
Sbjct: 280  KDIFSSAGFVWDAFIPQNSETGLSRGFAFVKFTSKQDAENAIQKFNGEKIGKRPIAVDWA 339

Query: 218  VSKKVYTAGA 189
            V KK+Y  GA
Sbjct: 340  VPKKIYITGA 349


>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
          Length = 918

 Score =  439 bits (1128), Expect = e-120
 Identities = 235/370 (63%), Positives = 273/370 (73%), Gaps = 3/370 (0%)
 Frame = -3

Query: 1289 MGNKKKPT---TNEEHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHR 1119
            MG K K       ++H PST+FVSN PYSFTN+QLEE+F DVGP+RRCFMVTQKGS  HR
Sbjct: 1    MGKKNKTEGGGARDQHCPSTVFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEHR 60

Query: 1118 GFGFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRV 939
            GFGFV FAV EDA+RAIELKNG+S+ GRKI VK A+HR   EQR +K  E   D IKTR 
Sbjct: 61   GFGFVQFAVKEDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSK--ENQDDIIKTRT 118

Query: 938  DIQEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDKEE 759
            + +++SS  V+Q  A              + Q ++KH       ++KA     D +DK  
Sbjct: 119  E-KDSSSEVVKQGHAS-------------DLQEIEKHV-----ELRKALKPCTDQADKGS 159

Query: 758  CSGKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCKMD 579
             S KQRVARTVIFGGL   DM E V  RA+ VG VCS+T   PKEEL ++GLSQDGCK+D
Sbjct: 160  FSEKQRVARTVIFGGLLNADMAEVVHLRAREVGTVCSVTYPLPKEELEHHGLSQDGCKID 219

Query: 578  TAAVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVPEI 399
             +AVLY SVK A A+V++LH+KEIKGG+VWARQLGGEGSKT+KWKLIVRNLPFK  V EI
Sbjct: 220  ASAVLYSSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKWKLIVRNLPFKAKVTEI 279

Query: 398  KDMFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVDWA 219
            KD+FSSAGFVWD FIP NSETGLS+GFAFVKFT K DAENAIQK NG+ IGKRPIAVDWA
Sbjct: 280  KDIFSSAGFVWDAFIPQNSETGLSRGFAFVKFTSKQDAENAIQKFNGEKIGKRPIAVDWA 339

Query: 218  VSKKVYTAGA 189
            V KK+Y  GA
Sbjct: 340  VPKKIYITGA 349


>ref|XP_010647688.1| PREDICTED: RNA-binding protein 28 isoform X1 [Vitis vinifera]
          Length = 957

 Score =  437 bits (1123), Expect = e-119
 Identities = 234/372 (62%), Positives = 274/372 (73%), Gaps = 5/372 (1%)
 Frame = -3

Query: 1289 MGNKKKPT---TNEEHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHR 1119
            MG K K       ++H PST+FVSN PYSFTN+QLEE+F DVGP+RRCFMVTQKGS  HR
Sbjct: 1    MGKKNKTEGGGARDQHCPSTVFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEHR 60

Query: 1118 GFGFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAKTAET--NKDNIKT 945
            GFGFV FAV EDA+RAIELKNG+S+ GRKI VK A+HR   EQR +K  +   + D IKT
Sbjct: 61   GFGFVQFAVKEDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQAVHSDDIIKT 120

Query: 944  RVDIQEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDK 765
            R + +++SS  V+Q  A              + Q ++KH       ++KA     D +DK
Sbjct: 121  RTE-KDSSSEVVKQGHAS-------------DLQEIEKHV-----ELRKALKPCTDQADK 161

Query: 764  EECSGKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCK 585
               S KQRVARTVIFGGL   DM E V  RA+ VG VCS+T   PKEEL ++GLSQDGCK
Sbjct: 162  GSFSEKQRVARTVIFGGLLNADMAEVVHLRAREVGTVCSVTYPLPKEELEHHGLSQDGCK 221

Query: 584  MDTAAVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVP 405
            +D +AVLY SVK A A+V++LH+KEIKGG+VWARQLGGEGSKT+KWKLIVRNLPFK  V 
Sbjct: 222  IDASAVLYSSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKWKLIVRNLPFKAKVT 281

Query: 404  EIKDMFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVD 225
            EIKD+FSSAGFVWD FIP NSETGLS+GFAFVKFT K DAENAIQK NG+ IGKRPIAVD
Sbjct: 282  EIKDIFSSAGFVWDAFIPQNSETGLSRGFAFVKFTSKQDAENAIQKFNGEKIGKRPIAVD 341

Query: 224  WAVSKKVYTAGA 189
            WAV KK+Y  GA
Sbjct: 342  WAVPKKIYITGA 353


>ref|XP_002313773.2| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|550331582|gb|EEE87728.2| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 974

 Score =  436 bits (1122), Expect = e-119
 Identities = 231/382 (60%), Positives = 277/382 (72%), Gaps = 9/382 (2%)
 Frame = -3

Query: 1277 KKPTTNE-----EHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRGF 1113
            KK  TNE     EHS ST+FVS+LPYSFT +QLEE+F DVGP+RRCFMVTQKGS  HRGF
Sbjct: 3    KKKNTNESGSASEHSSSTLFVSSLPYSFTKSQLEETFSDVGPIRRCFMVTQKGSTEHRGF 62

Query: 1112 GFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAKTAE----TNKDNIKT 945
            GFV FA+ +DA+RAIE+KNG+SV GRKI VKHA+HR S EQR AK A+       D  KT
Sbjct: 63   GFVQFALKDDANRAIEIKNGSSVGGRKIAVKHAMHRASLEQRRAKAAQGQGQVQDDATKT 122

Query: 944  RVDIQEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDK 765
               I E  SVA + E    +  L V  +   E   +    L K +  +K + L  DL+DK
Sbjct: 123  ---IDEKGSVASKPE----KHVLNVLESG-WELWYILSCMLRKPREPRKPAKLVTDLTDK 174

Query: 764  EECSGKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCK 585
            E CS KQRVARTVIFGGL    M E+V +RA+  G VCS+T   PKEEL  +GL QDGC+
Sbjct: 175  ENCSEKQRVARTVIFGGLLNDAMAEDVHQRAKETGTVCSVTYPLPKEELKKHGLEQDGCR 234

Query: 584  MDTAAVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVP 405
               +AVL+ SVK AR++V++LH+KEIKGG+VWARQLGGEG KT+KWKLI+RNLPFK    
Sbjct: 235  SGASAVLFTSVKEARSSVAMLHQKEIKGGIVWARQLGGEGCKTQKWKLIIRNLPFKAKPN 294

Query: 404  EIKDMFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVD 225
            EIK +F SAG VWD+F+PHNSETGLSKGFAFVKFTCK DAENAIQK NG+  GKRPIAVD
Sbjct: 295  EIKGVFESAGCVWDVFVPHNSETGLSKGFAFVKFTCKQDAENAIQKFNGQKFGKRPIAVD 354

Query: 224  WAVSKKVYTAGAKTDSTIDESN 159
            WAV KK+Y++GA   +  ++ N
Sbjct: 355  WAVPKKIYSSGANVSAASEDGN 376


>ref|XP_010254678.1| PREDICTED: RNA-binding protein 28 isoform X2 [Nelumbo nucifera]
          Length = 957

 Score =  436 bits (1121), Expect = e-119
 Identities = 233/434 (53%), Positives = 296/434 (68%), Gaps = 2/434 (0%)
 Frame = -3

Query: 1298 LHKMGNKKKPTTNEEHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHR 1119
            + + G   KP  +  HSPSTIFVSNLPYSFTN+QLEE+F +VGP+RRCFMVT+KGS+ HR
Sbjct: 7    MQESGEGLKPKEDSGHSPSTIFVSNLPYSFTNSQLEETFSEVGPIRRCFMVTEKGSNAHR 66

Query: 1118 GFGFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRV 939
            GFGFV FAV EDA+RAIELKNGAS+ GRK+ VKHA+HR   EQR+++  + + +++K   
Sbjct: 67   GFGFVQFAVMEDANRAIELKNGASIGGRKVVVKHAMHRLPLEQRHSRANQVHMNDVK--- 123

Query: 938  DIQEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDKEE 759
                           +K+ +   SS  V +E A + H  G  + +   S    D + K +
Sbjct: 124  ---------------KKDGDENFSSRMVKKEHASKLHTKGTTEEMVVLS----DHAYKTD 164

Query: 758  CSGKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCKMD 579
             S KQRVARTVIFGGL   DM EEV RR + VG VCSI+   PKEEL  +GL++DGCKM+
Sbjct: 165  GSEKQRVARTVIFGGLLSVDMAEEVHRRTREVGTVCSISYPLPKEELELHGLAKDGCKMN 224

Query: 578  TAAVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVPEI 399
             ++VLY SVKAARA+V++LH++EIKGG VWARQLGGEGSKTRKW+LIVRNLPFK  V EI
Sbjct: 225  ASSVLYASVKAARASVAMLHQQEIKGGCVWARQLGGEGSKTRKWRLIVRNLPFKAKVNEI 284

Query: 398  KDMFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVDWA 219
            KD+F+SAGFVWD+F+P NS+TGLSKGFAFV FTCK DAENAI+K+NG+ I KRPIAVDWA
Sbjct: 285  KDLFASAGFVWDVFVPLNSKTGLSKGFAFVSFTCKQDAENAIKKVNGQMISKRPIAVDWA 344

Query: 218  VSKKVYTAGAKTDSTIDE--SNXXXXXXXXXXXXXXXXXXXDERTTHLEVEDRISQDTHA 45
            V KK+YT G     T  +   N                    ++ +     + + + +  
Sbjct: 345  VPKKIYTTGGNLVETQTDGAENDRHDESDNSSIDMEGDYAGSDKDSQQVDAEEVQEGSDH 404

Query: 44   TDNRETSNKELDFE 3
             DN E  +KELDF+
Sbjct: 405  IDN-EVHSKELDFD 417


>ref|XP_012067208.1| PREDICTED: RNA-binding protein 28 [Jatropha curcas]
            gi|643735107|gb|KDP41748.1| hypothetical protein
            JCGZ_26766 [Jatropha curcas]
          Length = 974

 Score =  435 bits (1119), Expect = e-119
 Identities = 229/374 (61%), Positives = 276/374 (73%), Gaps = 7/374 (1%)
 Frame = -3

Query: 1289 MGNKKKPT-------TNEEHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGS 1131
            MG KKK T       ++ +HSP+T+FVSNLP SFTN+QLEE F DVGP+RRCF+V QKGS
Sbjct: 1    MGKKKKNTKETGHEGSDTKHSPNTVFVSNLPRSFTNSQLEEVFSDVGPIRRCFIVAQKGS 60

Query: 1130 DTHRGFGFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAKTAETNKDNI 951
              HRGFGFV FA+ EDA+RAIELKNG+SVDG+K+ VKHA+ R   EQR AK A+      
Sbjct: 61   TEHRGFGFVQFAIKEDANRAIELKNGSSVDGQKVAVKHAISRAPLEQRRAKAAQV----- 115

Query: 950  KTRVDIQEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLS 771
               VD    S  A++ +     D++    T V   +   +H    LK  +KA+ L I+L+
Sbjct: 116  ---VD----SDGAIKSQ----SDDISKVDTDVSNSEKSGEH----LKP-RKAAKLSIELA 159

Query: 770  DKEECSGKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDG 591
            DKE CS KQRVARTVIFGGL    M EEV RRA+  GNVCS+T   P++ELA +GL+QDG
Sbjct: 160  DKENCSEKQRVARTVIFGGLLNDAMAEEVHRRAKEAGNVCSVTYPLPEKELAQHGLAQDG 219

Query: 590  CKMDTAAVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTT 411
            C++  +AVLY SVK AR +V++LH+KEI GG VWARQLGGEGSK +KWKLIVRNLPFK  
Sbjct: 220  CRLSASAVLYASVKEARFSVAMLHQKEINGGTVWARQLGGEGSKIQKWKLIVRNLPFKAK 279

Query: 410  VPEIKDMFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIA 231
              EIKD+FSSAGFVWD+FIPHNSETGLSKGFAFVKFTCK  AENAIQK N +  GKRP+A
Sbjct: 280  ASEIKDVFSSAGFVWDVFIPHNSETGLSKGFAFVKFTCKQHAENAIQKFNAQMYGKRPMA 339

Query: 230  VDWAVSKKVYTAGA 189
            VDWAV KK+Y++GA
Sbjct: 340  VDWAVPKKIYSSGA 353



 Score = 59.3 bits (142), Expect = 8e-06
 Identities = 44/164 (26%), Positives = 83/164 (50%), Gaps = 8/164 (4%)
 Frame = -3

Query: 1277 KKPTTNEEHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRGFGFVHF 1098
            KK  T ++    T+F+SN+P+   N ++++ F   G V+    V  + +   RG GF+ F
Sbjct: 491  KKTDTEDDDLQRTVFISNIPFEIDNEEVKQRFSAFGKVKSFVPVLHQVTKRPRGTGFLKF 550

Query: 1097 AVAEDADRAIELKNGAS-----VDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRVDI 933
               + A  A+   N AS     + GR+++V  AL     +++ A+  ET K  I   VD 
Sbjct: 551  ETEDAATAAVSAANIASGLGILLKGRQLKVLKAL-----DKKAARDKETEKAKI---VDS 602

Query: 932  QEASSVAVRQEPAQKED---ELGVSSTAVGEEQALQKHELGKLK 810
            Q+  ++ + +E    E      G+S++ + + +AL + ++ KL+
Sbjct: 603  QDHRNLYLAKEGLILEGTPASEGISASDMAKRKALHEKKMIKLR 646


>gb|KJB79122.1| hypothetical protein B456_013G034200 [Gossypium raimondii]
          Length = 952

 Score =  431 bits (1109), Expect = e-118
 Identities = 230/377 (61%), Positives = 274/377 (72%), Gaps = 2/377 (0%)
 Frame = -3

Query: 1289 MGNKKKPTTNEE--HSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRG 1116
            MG  K+     E  HSP+T+FV+NL YSFTN+QLEE+F DVGP+RRCFMVT+KGS  HRG
Sbjct: 1    MGKNKRSDKRPESDHSPATVFVTNLAYSFTNSQLEETFSDVGPIRRCFMVTKKGSTEHRG 60

Query: 1115 FGFVHFAVAEDADRAIELKNGASVDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRVD 936
              FV FAVAEDA+RAIELKNG+SV GRKI VKHA+HR S EQR +K   T  D  KT   
Sbjct: 61   IAFVQFAVAEDANRAIELKNGSSVGGRKIGVKHAMHRASLEQRRSKA--TQDDATKT--- 115

Query: 935  IQEASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLKVIKKASALPIDLSDKEEC 756
                           K D+ G+ ++AV E       +L K    KKA+ L  DL+DKE C
Sbjct: 116  ---------------KNDKDGLLTSAV-EAHGSDLPKLEKPVQPKKAATLCSDLADKENC 159

Query: 755  SGKQRVARTVIFGGLQGHDMTEEVLRRAQNVGNVCSITRLPPKEELANYGLSQDGCKMDT 576
            S KQRVARTV+FGGL+  +M E+V R A+ +G VC++T   PKEEL  +    DGCKMD 
Sbjct: 160  SEKQRVARTVVFGGLRNAEMAEDVHRLAKEIGTVCAVTYPLPKEELEEH----DGCKMDA 215

Query: 575  AAVLYKSVKAARAAVSLLHRKEIKGGLVWARQLGGEGSKTRKWKLIVRNLPFKTTVPEIK 396
            +AVL+ SVK+A  AV++LH+KEI G +VWARQLGGEGSKT+KWKLI+RNL FK  + EIK
Sbjct: 216  SAVLFTSVKSAHTAVAMLHQKEIHGSIVWARQLGGEGSKTQKWKLIIRNLSFKAKLSEIK 275

Query: 395  DMFSSAGFVWDIFIPHNSETGLSKGFAFVKFTCKHDAENAIQKLNGKTIGKRPIAVDWAV 216
            DMFS+AGFVWD+FIPHNSETGLSKGFAFVKFT K DAENAIQK NGKT+ KRPIAVDWAV
Sbjct: 276  DMFSAAGFVWDVFIPHNSETGLSKGFAFVKFTSKQDAENAIQKFNGKTLCKRPIAVDWAV 335

Query: 215  SKKVYTAGAKTDSTIDE 165
             KK+Y+AG  T  T D+
Sbjct: 336  PKKLYSAGGNTAVTSDD 352



 Score = 63.5 bits (153), Expect = 4e-07
 Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
 Frame = -3

Query: 1274 KPTTNEEHSPSTIFVSNLPYSFTNTQLEESFGDVGPVRRCFMVTQKGSDTHRGFGFVHFA 1095
            K   +EE    T+F+SNLP+   N +++E F   G V+    V    +   RG GF+ F 
Sbjct: 473  KQIDSEEELQRTVFISNLPFDIDNKEVKERFSGFGEVQSFIPVLHPVTKRPRGTGFLKFK 532

Query: 1094 VAEDADRAIELKNGAS-----VDGRKIRVKHALHRPSREQRNAKTAETNKDNIKTRVDIQ 930
              + A  A+   N +S     + GR+I+V  AL R S   +  + A+  + +++     +
Sbjct: 533  TIDAATAAVSAANASSGLGIFLKGRQIKVLKALDRKSAHDKELEKAKAEEHDLRNLYLAK 592

Query: 929  EASSVAVRQEPAQKEDELGVSSTAVGEEQALQKHELGKLK 810
            E   + V   PA K+    VS++ + + Q L + ++ KL+
Sbjct: 593  E--GLIVEGTPAAKD----VSASDMEKRQMLHEKKMTKLQ 626