BLASTX nr result
ID: Aconitum23_contig00005773
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00005773
(1201 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 569 e-159
ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 568 e-159
ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polyme... 567 e-159
ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polyme... 566 e-158
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 564 e-158
ref|XP_009781107.1| PREDICTED: probable RNA-dependent RNA polyme... 563 e-158
emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera] 563 e-157
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 562 e-157
ref|XP_011075687.1| PREDICTED: probable RNA-dependent RNA polyme... 562 e-157
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa... 562 e-157
ref|XP_009623376.1| PREDICTED: probable RNA-dependent RNA polyme... 561 e-157
emb|CDP05596.1| unnamed protein product [Coffea canephora] 560 e-156
ref|XP_002281315.1| PREDICTED: probable RNA-dependent RNA polyme... 560 e-156
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida] 558 e-156
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum] 555 e-155
ref|XP_008381760.1| PREDICTED: probable RNA-dependent RNA polyme... 547 e-153
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis... 547 e-153
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th... 546 e-152
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper... 546 e-152
ref|XP_012072325.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 544 e-152
>ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Populus
euphratica]
Length = 1132
Score = 569 bits (1466), Expect = e-159
Identities = 276/397 (69%), Positives = 325/397 (81%), Gaps = 1/397 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EAL +MSPGEN N+LKEML+CGY+PD EP+LSMMLQTFR SKLLELR K+RI++ +GR +
Sbjct: 657 EALVLMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRLM 716
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQGQNNS-IHRTRSNQSTRIVEETVVVAKNPCLHPG 843
+GCLDET TLE+GQVF+Q S + ++S + R ++E +VVVAKNPCLHPG
Sbjct: 717 MGCLDETRTLEHGQVFVQFSGSRFRNLYDSSDVFSERGRGQCYLIEGSVVVAKNPCLHPG 776
Query: 842 DVRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQIQP 663
DVR+L+AVDV LHHMVDCVVFP+KG RPHPN+CSGSDLDGDIYFV WDPELIP +QI P
Sbjct: 777 DVRILKAVDVPALHHMVDCVVFPQKGPRPHPNQCSGSDLDGDIYFVCWDPELIPSQQISP 836
Query: 662 MDYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTELA 483
MDYTP P LDHDV IE+V+EYFTNY+VNDSLGIIANAHTAFADKE+ A+S+ C ELA
Sbjct: 837 MDYTPEPTLQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTAFADKESLKAMSEPCLELA 896
Query: 482 KLFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPLSS 303
+ FSIAVDFPKTGVPAEIPS L VREYPDFMEK DKP+YES V+GKLFREVKDI P +S
Sbjct: 897 RKFSIAVDFPKTGVPAEIPSNLRVREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTS 956
Query: 302 CITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLARG 123
I SFT DVA++CYD DMEVDG+E Y+DDA +YK YD KLG LM YG+KTEAELL+
Sbjct: 957 SIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGS 1016
Query: 122 IVKASVSFNRKQDLDAIGVALRALRKEARGWLEEKGS 12
+K S SF +K+D +AIG+A+R+LRKEAR W EKGS
Sbjct: 1017 FMKMSKSFTKKRDAEAIGMAVRSLRKEARSWFNEKGS 1053
>ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Populus
euphratica]
Length = 1132
Score = 568 bits (1463), Expect = e-159
Identities = 276/397 (69%), Positives = 324/397 (81%), Gaps = 1/397 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EAL +MSPGEN N+LKEML+CGY+PD EP+LSMMLQTFR SKLLELR K+RI++ +GR +
Sbjct: 657 EALVLMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRLM 716
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQGQNNS-IHRTRSNQSTRIVEETVVVAKNPCLHPG 843
+GCLDET TLE+GQVF+Q S + ++S + R ++E +VVVAKNPCLHPG
Sbjct: 717 MGCLDETRTLEHGQVFVQFSGSRFRNLYDSSDVFSERGRGQCYLIEGSVVVAKNPCLHPG 776
Query: 842 DVRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQIQP 663
DVR+L+AVDV LHHMVDCVVFP+KG RPHP ECSGSDLDGDIYFV WDPELIP +QI P
Sbjct: 777 DVRILKAVDVPALHHMVDCVVFPQKGPRPHPKECSGSDLDGDIYFVCWDPELIPSQQISP 836
Query: 662 MDYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTELA 483
MDYTP P LDHDV IE+V+EYFTNY+VNDSLGIIANAHTAFADKE+ A+S+ C ELA
Sbjct: 837 MDYTPEPTLQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTAFADKESLKAMSEPCLELA 896
Query: 482 KLFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPLSS 303
+ FSIAVDFPKTGVPAEIPS L VREYPDFMEK DKP+YES V+GKLFREVKDI P +S
Sbjct: 897 RKFSIAVDFPKTGVPAEIPSNLRVREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTS 956
Query: 302 CITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLARG 123
I SFT DVA++CYD DMEVDG+E Y+DDA +YK YD KLG LM YG+KTEAELL+
Sbjct: 957 SIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGS 1016
Query: 122 IVKASVSFNRKQDLDAIGVALRALRKEARGWLEEKGS 12
+K S SF +K+D +AIG+A+R+LRKEAR W EKGS
Sbjct: 1017 FMKMSKSFTKKRDAEAIGMAVRSLRKEARSWFNEKGS 1053
>ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962527|ref|XP_010275424.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962530|ref|XP_010275500.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962533|ref|XP_010275583.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962536|ref|XP_010275643.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962539|ref|XP_010275710.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
Length = 1136
Score = 567 bits (1461), Expect = e-159
Identities = 274/397 (69%), Positives = 328/397 (82%), Gaps = 3/397 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EALEIMSPGEN N+LKEML+CGY+P+ EP+LSMMLQTFR SKLLELR K+RI+V +GRSL
Sbjct: 658 EALEIMSPGENTNILKEMLLCGYEPNAEPFLSMMLQTFRASKLLELRTKTRIFVPNGRSL 717
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQGQNNSIHRTRSNQSTR---IVEETVVVAKNPCLH 849
+GCLDET TL+YG+VF+QVS IG +Q +S+ N+ + IVE ++VAKNPCLH
Sbjct: 718 LGCLDETRTLKYGEVFVQVSSIGRRQFHESSLFVFSGNEPEQQKFIVEGKIIVAKNPCLH 777
Query: 848 PGDVRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQI 669
PGDVR+L+AV+V LHHMVDCVVFP++G RPHPNECSGSDLDGD+YFV WDP+LIPPRQI
Sbjct: 778 PGDVRLLQAVNVPALHHMVDCVVFPQEGKRPHPNECSGSDLDGDVYFVCWDPDLIPPRQI 837
Query: 668 QPMDYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTE 489
QPM+Y P P+ LDHDV IE+++EYFTNY+VN+SLGIIANAHTAFADKE A SD+C +
Sbjct: 838 QPMEYLPEPSVNLDHDVTIEEIEEYFTNYIVNESLGIIANAHTAFADKEPKKAESDACLQ 897
Query: 488 LAKLFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPL 309
LAKLFSIAVDFPKTGVPAEIP LYV+EYPDFMEKLDKPTY S +V+GKLFR VKDI P
Sbjct: 898 LAKLFSIAVDFPKTGVPAEIPQHLYVKEYPDFMEKLDKPTYVSERVIGKLFRAVKDIAPQ 957
Query: 308 SSCITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLA 129
+ I SFT +VA+ YD DMEVDG+E YL DA +YK +YD KLG LM YG+KTEAE+L+
Sbjct: 958 TWSIRSFTQEVARRSYDPDMEVDGFEDYLSDAYYYKGEYDSKLGNLMDYYGIKTEAEILS 1017
Query: 128 RGIVKASVSFNRKQDLDAIGVALRALRKEARGWLEEK 18
I+K S SF +K+D +AI +A+R+LRKEAR W EK
Sbjct: 1018 GNIMKLSKSFTKKRDAEAISLAVRSLRKEARAWFNEK 1054
>ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 566 bits (1459), Expect = e-158
Identities = 276/400 (69%), Positives = 328/400 (82%), Gaps = 2/400 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EALE+MSPGEN NVLKEMLMCGYKPD EP+LSMMLQTFR +KLLELR K+RI+V +GRS+
Sbjct: 646 EALELMSPGENTNVLKEMLMCGYKPDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSM 705
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQGQNNSI--HRTRSNQSTRIVEETVVVAKNPCLHP 846
+GCLDET TLEYG+VF+Q+S G +Q +S+ + S+ I+E +VVAKNPCLHP
Sbjct: 706 MGCLDETRTLEYGEVFVQISGTGGRQSFGDSLMFRGSGSHHDNFILEGKIVVAKNPCLHP 765
Query: 845 GDVRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQIQ 666
GDVRVL AV+V LHHMVDCVVFP+KG RPHPNECSGSDLDGDIYFV WD +LIPP+QI
Sbjct: 766 GDVRVLWAVNVPTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQQIN 825
Query: 665 PMDYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTEL 486
PMDYTPAP +LDHDV+IE+V+EYFTNY+VNDSLGIIANAHT FADKE A D CTEL
Sbjct: 826 PMDYTPAPTKVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTEL 885
Query: 485 AKLFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPLS 306
AKLFSIAVDFPKTGVPAEIP L V+EYPDFMEK DKPTYES V+GKLFREVKDI P +
Sbjct: 886 AKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHN 945
Query: 305 SCITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLAR 126
I SFT DVA++ YD DMEV G+E Y+ DA +YK +YD KLG LM YG+KTE+E+L+
Sbjct: 946 CNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSG 1005
Query: 125 GIVKASVSFNRKQDLDAIGVALRALRKEARGWLEEKGSNS 6
I++ S SF+R++D +AIG+A+++LRKEAR W + GS +
Sbjct: 1006 SIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMGSET 1045
>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
family protein [Populus trichocarpa]
Length = 1133
Score = 564 bits (1454), Expect = e-158
Identities = 272/397 (68%), Positives = 325/397 (81%), Gaps = 1/397 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EALE+MSPGEN N+LKEML+CGY+PD EP+LSMMLQTFR SKLLELR K+RI++ +GRS+
Sbjct: 657 EALELMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSM 716
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQGQNNS-IHRTRSNQSTRIVEETVVVAKNPCLHPG 843
+GCLDET TLE+GQVF++ S + ++S + R +++ +VVVAKNPCLHPG
Sbjct: 717 MGCLDETRTLEHGQVFVKFSGSRFRNLYDSSDMFSERGRGQCYLIKGSVVVAKNPCLHPG 776
Query: 842 DVRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQIQP 663
D+R+L+AVDV LHHMVDCVVFP+KG RPHPNECSGSDLDGDIYFV WDPELIP +QI P
Sbjct: 777 DLRILKAVDVPALHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSQQISP 836
Query: 662 MDYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTELA 483
MDYTP P LDHDV IE+V+EYFTNY+VNDSLG+IANAHTA ADKE+ A+S+ C ELA
Sbjct: 837 MDYTPEPPLQLDHDVTIEEVEEYFTNYIVNDSLGVIANAHTAHADKESLKAMSEPCVELA 896
Query: 482 KLFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPLSS 303
+ FSIAVDFPKTGVPAEIPS L REYPDFMEK DKP+YES V+GKLFREVKDI P +S
Sbjct: 897 RKFSIAVDFPKTGVPAEIPSNLRAREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTS 956
Query: 302 CITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLARG 123
I SFT DVA++CYD DMEVDG+E Y+DDA +YK YD KLG LM YG+KTEAELL+
Sbjct: 957 SIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGS 1016
Query: 122 IVKASVSFNRKQDLDAIGVALRALRKEARGWLEEKGS 12
+K S SF +K+D +AIG+A+R+L+KEAR W EKGS
Sbjct: 1017 FMKMSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKGS 1053
>ref|XP_009781107.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
sylvestris] gi|698458664|ref|XP_009781108.1| PREDICTED:
probable RNA-dependent RNA polymerase 1 [Nicotiana
sylvestris] gi|698458668|ref|XP_009781109.1| PREDICTED:
probable RNA-dependent RNA polymerase 1 [Nicotiana
sylvestris]
Length = 1116
Score = 563 bits (1452), Expect = e-158
Identities = 273/397 (68%), Positives = 330/397 (83%), Gaps = 3/397 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EALE+MSPGEN N+LKEML CGY PD EP+LSMMLQTFR SKLL+LR +SRI++ +GR++
Sbjct: 645 EALELMSPGENTNILKEMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRAM 704
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQGQNNSIHRTRSNQSTR---IVEETVVVAKNPCLH 849
+GCLDE+ TLEYGQVF+Q + G +Q S H + ST I+E VVVAKNPCLH
Sbjct: 705 MGCLDESRTLEYGQVFVQFTGTGRRQFYEES-HPFNDSGSTNCNFILEGNVVVAKNPCLH 763
Query: 848 PGDVRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQI 669
PGD+RVLRAVDV LHHMVDCVVFP+KG RPHPNECSGSDLDGDIYFV WDP+LIPPRQ+
Sbjct: 764 PGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQV 823
Query: 668 QPMDYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTE 489
QPMDYTPAP+ LDHDV IE+VQEYFTNY+VNDSLGIIANAH FAD+E MA+SD C +
Sbjct: 824 QPMDYTPAPSTQLDHDVTIEEVQEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKQ 883
Query: 488 LAKLFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPL 309
LA+LFSIAVDFPKTGVPAEIPS+L +EYPDFMEK DKPTY S KV+GKLF++VKD P
Sbjct: 884 LAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFMEKPDKPTYHSEKVIGKLFQKVKDKTPQ 943
Query: 308 SSCITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLA 129
+S I +FT DVA++ YD DM V+G+E Y+D+A +YK +YD KLG LM YGVKTEAE+L+
Sbjct: 944 ASSIATFTMDVARKSYDGDMIVNGFEDYIDEAFYYKSEYDNKLGNLMDYYGVKTEAEILS 1003
Query: 128 RGIVKASVSFNRKQDLDAIGVALRALRKEARGWLEEK 18
GI+KAS +F+R++D +AIG+A+R+LRKEAR W +++
Sbjct: 1004 GGIMKASKTFDRRKDAEAIGIAVRSLRKEARTWFKKR 1040
>emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]
Length = 697
Score = 563 bits (1450), Expect = e-157
Identities = 269/400 (67%), Positives = 328/400 (82%), Gaps = 2/400 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EALE+MSPGEN N+LKEMLMCGYKPD EP+LSMMLQTFR +KLLELR K+RI+V +GRS+
Sbjct: 188 EALELMSPGENTNILKEMLMCGYKPDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSM 247
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQGQNNSI--HRTRSNQSTRIVEETVVVAKNPCLHP 846
+GCLDET TLEYG+VF+Q+S G +Q +S+ + + S+ I+E VVVAKNPCLHP
Sbjct: 248 MGCLDETRTLEYGEVFVQISGTGGRQSFGDSLMFYGSGSHHDNFILEGKVVVAKNPCLHP 307
Query: 845 GDVRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQIQ 666
GDVR+L AVDV LHHMVDCVVFP+KG+RPHP+ECSGSDLDGDIYFV WD +LIPPRQI
Sbjct: 308 GDVRILSAVDVPALHHMVDCVVFPQKGMRPHPDECSGSDLDGDIYFVCWDHDLIPPRQIN 367
Query: 665 PMDYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTEL 486
PMDYTPAP +LDHDV+IE+V+EYFTNY+ ND LGIIANAHT FADKE AL C EL
Sbjct: 368 PMDYTPAPTKVLDHDVMIEEVEEYFTNYIGNDKLGIIANAHTVFADKEYDKALCPPCKEL 427
Query: 485 AKLFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPLS 306
AKLFSIA++FPKTGVPAEIP L+V+EYPDFMEK +KPTYES V+GKLFREVKD+ P +
Sbjct: 428 AKLFSIALEFPKTGVPAEIPFHLHVKEYPDFMEKANKPTYESQSVIGKLFREVKDVAPHN 487
Query: 305 SCITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLAR 126
I SFT DVA + YD DMEVDG+E Y+ DA +YK +YD KLG LM CYG++TE+E+L+
Sbjct: 488 YDIRSFTRDVAMQSYDADMEVDGFEDYVRDAFYYKSQYDFKLGSLMDCYGIRTESEILSG 547
Query: 125 GIVKASVSFNRKQDLDAIGVALRALRKEARGWLEEKGSNS 6
++K S SF++++D +AI +A+R+LRKEAR W + GS +
Sbjct: 548 SLMKMSKSFDKRKDAEAIALAVRSLRKEARTWFNKMGSGT 587
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 562 bits (1449), Expect = e-157
Identities = 274/401 (68%), Positives = 327/401 (81%), Gaps = 2/401 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EALE+MSPGEN N+LKE+L+CGYKPD EP+LSMMLQTFR SKLLELR K+RI++ +GRS+
Sbjct: 661 EALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSM 720
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQ--GQNNSIHRTRSNQSTRIVEETVVVAKNPCLHP 846
+GCLDET TL YGQVF+Q+S G +Q G+++ +RS Q IV+ VVVAKNPCLHP
Sbjct: 721 MGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRF-IVQGLVVVAKNPCLHP 779
Query: 845 GDVRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQIQ 666
GDVRVL+AV+V LHHMVDCVVFP+KG+RPHPNECSGSDLDGDIYFV WD ELIPP+Q
Sbjct: 780 GDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDP 839
Query: 665 PMDYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTEL 486
PMDYTPA + LDHDV IEDV+EYFTNY+VNDSLGIIANAHT FAD+E A S+ C +L
Sbjct: 840 PMDYTPAQSMQLDHDVQIEDVEEYFTNYIVNDSLGIIANAHTVFADREPHKARSEPCLQL 899
Query: 485 AKLFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPLS 306
A+ FSIAVDFPKTGVPAEIP LYV+EYPDFMEK DKPTYES V+GKLFR VKDI P +
Sbjct: 900 AEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHT 959
Query: 305 SCITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLAR 126
SCI FT +VA+ YD DMEVDG+E ++DDA ++K YD KLG LM YG+KTEAE+L
Sbjct: 960 SCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTG 1019
Query: 125 GIVKASVSFNRKQDLDAIGVALRALRKEARGWLEEKGSNSS 3
I+K S SF +++D +AIG+A+RALRKEAR W +EK + +
Sbjct: 1020 SIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEKSGSDT 1060
>ref|XP_011075687.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Sesamum indicum]
gi|747058682|ref|XP_011075688.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Sesamum indicum]
gi|747058684|ref|XP_011075689.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Sesamum indicum]
Length = 1115
Score = 562 bits (1448), Expect = e-157
Identities = 275/399 (68%), Positives = 328/399 (82%), Gaps = 1/399 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EAL++M+PGEN N+LKEML CGYKPD EP+LSMMLQTFR SKLL+LR K+RI+V GR +
Sbjct: 647 EALDLMAPGENTNILKEMLKCGYKPDGEPFLSMMLQTFRASKLLDLRLKARIFVPQGRQM 706
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQGQNNSI-HRTRSNQSTRIVEETVVVAKNPCLHPG 843
+GCLDETGTLEYG+VF+Q S +Q SI ++ IV+ VVVAKNPCLHPG
Sbjct: 707 MGCLDETGTLEYGEVFVQFSGALRRQFNEESIMFNDYMSEYNYIVKGKVVVAKNPCLHPG 766
Query: 842 DVRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQIQP 663
DVRVL+AVDV+ LHHMVDCVVFPKKG+RPHPNECSGSDLDGDIYFV WDP+LIPPRQ+ P
Sbjct: 767 DVRVLKAVDVEALHHMVDCVVFPKKGMRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVSP 826
Query: 662 MDYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTELA 483
MDY PAP LDHDV IE+V+EYFTNY+VNDSLGII+NAHT FADKE SMALS+SC ELA
Sbjct: 827 MDYDPAPTTGLDHDVTIEEVEEYFTNYIVNDSLGIISNAHTVFADKEESMALSESCLELA 886
Query: 482 KLFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPLSS 303
+LFSIAVDFPKTGVPAEIPS L V+EYPDFM+K DK YES +V+GKL+REVKDI P ++
Sbjct: 887 RLFSIAVDFPKTGVPAEIPSHLRVKEYPDFMDKPDKTAYESKRVIGKLYREVKDIAPHTT 946
Query: 302 CITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLARG 123
SFT +VA+ YD DMEVDG++ Y+D+A YK +YD KLG LM YG+KTEAE+L+ G
Sbjct: 947 SSKSFTKEVARRSYDPDMEVDGFKDYIDEAFDYKTEYDYKLGNLMEYYGIKTEAEILSGG 1006
Query: 122 IVKASVSFNRKQDLDAIGVALRALRKEARGWLEEKGSNS 6
I+K S +F+R++D +AIGVA+R+LR EAR W +KGS S
Sbjct: 1007 IMKTSKTFDRRKDAEAIGVAVRSLRNEARSWF-KKGSES 1044
>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
[Nicotiana glutinosa]
Length = 1117
Score = 562 bits (1448), Expect = e-157
Identities = 272/397 (68%), Positives = 328/397 (82%), Gaps = 3/397 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EALE+MSPGEN N+LKEML CGY PD EP+LSMMLQTFR SKLL+LR +SRI++ +GR++
Sbjct: 646 EALELMSPGENTNILKEMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRTM 705
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQGQNNSIHRTRSNQSTR---IVEETVVVAKNPCLH 849
+GCLDE+ TLEYGQVF+Q + G +Q S H + ST I+E VVVAKNPCLH
Sbjct: 706 MGCLDESRTLEYGQVFVQFTGTGRRQFYEES-HPFNDSGSTNCDFILEGNVVVAKNPCLH 764
Query: 848 PGDVRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQI 669
PGD+RVLRAVDV LHHMVDCVVFP+KG RPHPNECSGSDLDGDIYFV WDP+L+PPRQ
Sbjct: 765 PGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLVPPRQF 824
Query: 668 QPMDYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTE 489
QPMDYTPAP+ LDHDV IE+V+EYFTNY+VNDSLGIIANAH FAD+E MA+SD C +
Sbjct: 825 QPMDYTPAPSTQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKQ 884
Query: 488 LAKLFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPL 309
LA+LFSIAVDFPKTGVPAEIPS+L +EYPDFMEK DKPTY S KV+GKLF++VKD P
Sbjct: 885 LAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFMEKPDKPTYHSEKVIGKLFQKVKDKTPQ 944
Query: 308 SSCITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLA 129
+S I +FT DVA++ YD DM V+G+E Y+D+A +YK +YD KLG LM YG+KTEAE+L+
Sbjct: 945 ASSIANFTMDVARKSYDGDMIVNGFEDYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILS 1004
Query: 128 RGIVKASVSFNRKQDLDAIGVALRALRKEARGWLEEK 18
GI+KAS +F+R++D DAIGVA+R+LRKEAR W + +
Sbjct: 1005 GGIMKASKTFDRRKDADAIGVAVRSLRKEARTWFKRR 1041
>ref|XP_009623376.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
tomentosiformis] gi|697138603|ref|XP_009623378.1|
PREDICTED: probable RNA-dependent RNA polymerase 1
[Nicotiana tomentosiformis]
gi|697138605|ref|XP_009623379.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nicotiana
tomentosiformis] gi|697138607|ref|XP_009623380.1|
PREDICTED: probable RNA-dependent RNA polymerase 1
[Nicotiana tomentosiformis]
Length = 1116
Score = 561 bits (1446), Expect = e-157
Identities = 269/396 (67%), Positives = 329/396 (83%), Gaps = 2/396 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EALE+MSPGEN N+LKEML CGY PD EP+LSMMLQTFR SKLL+LR ++RI++ +GR++
Sbjct: 645 EALELMSPGENTNILKEMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRTRIFIPNGRTM 704
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQ--GQNNSIHRTRSNQSTRIVEETVVVAKNPCLHP 846
+GCLDE+ TLEYGQVF+Q SR G +Q +++ + + S I++ VVVAKNPCLHP
Sbjct: 705 MGCLDESRTLEYGQVFVQFSRAGRRQFYEESHPFNDSGSANCDFILKGNVVVAKNPCLHP 764
Query: 845 GDVRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQIQ 666
GD+RVLRAVDV LHHMVDCVVFP+KG RPHPNECSGSDLDGDIYFV WDP+LIPPRQ+Q
Sbjct: 765 GDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQ 824
Query: 665 PMDYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTEL 486
PMDYTPAP LDHDV IE+V+EYFTNY+VNDSLGIIANAH FAD+E MA+SD C +L
Sbjct: 825 PMDYTPAPTTQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKQL 884
Query: 485 AKLFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPLS 306
A+LFSIAVDFPKTGVPAEIPS+L +EYPDFMEK DKPTY S KV+GKLF++VK+ P +
Sbjct: 885 AQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFMEKPDKPTYPSEKVIGKLFQKVKNKTPQA 944
Query: 305 SCITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLAR 126
S I +FT DVA++ YD DM VDG+E Y+D+A +YK +YD KLG LM YG+KTEAE+L+
Sbjct: 945 SSIATFTRDVARKSYDSDMIVDGFEDYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSG 1004
Query: 125 GIVKASVSFNRKQDLDAIGVALRALRKEARGWLEEK 18
GI+KAS +F+R++D +AIGVA+R LRKEAR W + +
Sbjct: 1005 GIMKASKTFDRRKDAEAIGVAVRCLRKEARAWFKRR 1040
>emb|CDP05596.1| unnamed protein product [Coffea canephora]
Length = 1112
Score = 560 bits (1442), Expect = e-156
Identities = 274/402 (68%), Positives = 328/402 (81%), Gaps = 4/402 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EALE+M+PGEN NVLKEML CGYKPD EP+LSMMLQTFR SKLL+LR K+RI++ DGRS+
Sbjct: 647 EALELMAPGENTNVLKEMLKCGYKPDSEPFLSMMLQTFRASKLLDLRTKTRIFIPDGRSM 706
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQGQNNSI----HRTRSNQSTRIVEETVVVAKNPCL 852
IGCLDET TLEYGQVF+Q S GC+Q ++SI H+T I++ TVVVAKNPCL
Sbjct: 707 IGCLDETRTLEYGQVFVQFSSAGCRQFYDDSISYYEHKT-------ILKGTVVVAKNPCL 759
Query: 851 HPGDVRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQ 672
HPGD+R+L+AVD+ LHHMVDCVVFP+KG RPH NECSGSDLDGDIYFV WDP+LIPPRQ
Sbjct: 760 HPGDIRILKAVDLPTLHHMVDCVVFPQKGKRPHTNECSGSDLDGDIYFVCWDPDLIPPRQ 819
Query: 671 IQPMDYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCT 492
+PMDYTPAP L+H+V IE+V+EYFTNY+VNDSLGIIANAHT FAD+E A S C
Sbjct: 820 DEPMDYTPAPTMQLEHEVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRELLKARSKPCL 879
Query: 491 ELAKLFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVP 312
ELA+LFSIAVDFPKTGVPAEI S L V+EYPDFMEK DK TY+S V+GKLFREVK+I P
Sbjct: 880 ELARLFSIAVDFPKTGVPAEITSHLRVKEYPDFMEKSDKTTYDSQHVIGKLFREVKEIAP 939
Query: 311 LSSCITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELL 132
+S I SFT +VA++ YD DMEVDG+E Y+D+A YK +YD KLG LM YG+KTEAE+L
Sbjct: 940 HTSSIRSFTREVARKSYDIDMEVDGFEDYVDEAFDYKSEYDYKLGNLMDYYGIKTEAEIL 999
Query: 131 ARGIVKASVSFNRKQDLDAIGVALRALRKEARGWLEEKGSNS 6
+ GI+K S SF+R++D +A+G+A+R+LRKEAR W G +S
Sbjct: 1000 SGGIMKMSRSFDRRKDAEAVGMAVRSLRKEARTWFNRNGGHS 1041
>ref|XP_002281315.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera]
gi|731369199|ref|XP_010650995.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1109
Score = 560 bits (1442), Expect = e-156
Identities = 268/400 (67%), Positives = 327/400 (81%), Gaps = 2/400 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EALE+MSPGEN N+LKEMLMCGYKPD EP+LSMMLQTFR +KLLELR K+RI+V +GRS+
Sbjct: 644 EALELMSPGENTNILKEMLMCGYKPDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSM 703
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQGQNNSI--HRTRSNQSTRIVEETVVVAKNPCLHP 846
+GCLDET TLEYG+VF+Q+S G +Q +S+ + + S+ I+E VVVAKNPCLHP
Sbjct: 704 MGCLDETRTLEYGEVFVQISGTGGRQSFGDSLMFYGSGSHHDNFILEGKVVVAKNPCLHP 763
Query: 845 GDVRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQIQ 666
GDVR+L AVDV LHHMVDCVVFP+KG+RPHP+ECSGSDLDGDIYFV WD +LIPPRQI
Sbjct: 764 GDVRILSAVDVPALHHMVDCVVFPQKGMRPHPDECSGSDLDGDIYFVCWDHDLIPPRQIN 823
Query: 665 PMDYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTEL 486
PMDYTPAP +LDHDV+IE+V+EYFTNY+ ND LGIIANAHT FADKE AL C EL
Sbjct: 824 PMDYTPAPTKVLDHDVMIEEVEEYFTNYIGNDKLGIIANAHTVFADKEYDKALCPPCKEL 883
Query: 485 AKLFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPLS 306
AKLFSIA++FPKTGVPAEIP L+V+EYPDFMEK +KPTYES V+GKLFREVKD+ P +
Sbjct: 884 AKLFSIALEFPKTGVPAEIPFHLHVKEYPDFMEKANKPTYESQSVIGKLFREVKDVAPHN 943
Query: 305 SCITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLAR 126
+ SFT DVA + YD DMEVDG+E Y+ DA +YK +YD KLG LM C G++TE+E+L+
Sbjct: 944 YDVRSFTRDVAMQSYDADMEVDGFEDYVRDAFYYKSQYDFKLGSLMDCCGIRTESEILSG 1003
Query: 125 GIVKASVSFNRKQDLDAIGVALRALRKEARGWLEEKGSNS 6
I+K S SF++++D +AI +A+R+LRKEAR W + GS +
Sbjct: 1004 SIMKMSKSFDKRKDAEAIALAVRSLRKEARTWFNKMGSGT 1043
>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
Length = 775
Score = 558 bits (1438), Expect = e-156
Identities = 270/396 (68%), Positives = 324/396 (81%), Gaps = 2/396 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EAL++MSPGEN N+LKEML CGY PD EP+LSMMLQTFR SKLL+LR ++RI++ GRS+
Sbjct: 336 EALDLMSPGENTNILKEMLNCGYLPDAEPFLSMMLQTFRASKLLDLRTRTRIFIPKGRSM 395
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQGQNNSIHRTRSNQSTR--IVEETVVVAKNPCLHP 846
+GCLDE+ TLEYGQVF+Q + G +Q S H S + I++ VVVAKNPCLHP
Sbjct: 396 MGCLDESRTLEYGQVFVQFTGAGGRQFYEESHHFNDSGSANYNFILKGNVVVAKNPCLHP 455
Query: 845 GDVRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQIQ 666
GD+RVL+AVDV LHHMVDCVVFP+KG RPHPNECSGSDLDGDIYFV WDP+LIPPRQ+Q
Sbjct: 456 GDIRVLKAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQ 515
Query: 665 PMDYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTEL 486
PMDYTPAP+ LDHDV IE+V+EYFTNYMVND LG+IANAH FAD+E +MA+SD C EL
Sbjct: 516 PMDYTPAPSIQLDHDVTIEEVEEYFTNYMVNDGLGVIANAHVVFADREPNMAMSDPCIEL 575
Query: 485 AKLFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPLS 306
A+LFSIAVDFPKTGVPAEIPS+L +EYPDFMEK DK TY S KV+GKLFREVKD +
Sbjct: 576 AQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFMEKPDKTTYHSEKVIGKLFREVKDKTTQA 635
Query: 305 SCITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLAR 126
S IT+FT DVA+ YD D+EVDG+E Y+D+A YK +YD KLG LM YG+KTEAE L+
Sbjct: 636 SSITTFTRDVARRSYDTDLEVDGFEDYIDEAFDYKSEYDKKLGNLMDYYGIKTEAETLSG 695
Query: 125 GIVKASVSFNRKQDLDAIGVALRALRKEARGWLEEK 18
GI+KAS +F+R++D +AIGVA+R+LRKEAR W + +
Sbjct: 696 GIMKASKTFDRRRDAEAIGVAVRSLRKEARTWFKRR 731
>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
Length = 1116
Score = 555 bits (1430), Expect = e-155
Identities = 266/396 (67%), Positives = 327/396 (82%), Gaps = 2/396 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EALE+MSPGEN N+LKEML CGY PD EP+LSMMLQTFR SKLL+LR ++RI++ +GR++
Sbjct: 645 EALELMSPGENTNILKEMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRTRIFIPNGRTM 704
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQ--GQNNSIHRTRSNQSTRIVEETVVVAKNPCLHP 846
+GCLDE+ TLEYGQVF+Q S G +Q +++ + + S I++ VVVAKNPCLHP
Sbjct: 705 MGCLDESRTLEYGQVFVQFSGAGRRQFFEESHPFNDSGSANCDFILKGNVVVAKNPCLHP 764
Query: 845 GDVRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQIQ 666
GD+RVLRAVDV LHHMVDCVVFP+KG RPHPNECSGSDLDGDIYFV WDP+LIPPRQ+Q
Sbjct: 765 GDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQ 824
Query: 665 PMDYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTEL 486
MDYTPAP LDHDV IE+V+EYFTNY++NDSLGIIANAH FAD+E MA+SD C +L
Sbjct: 825 SMDYTPAPTTQLDHDVTIEEVEEYFTNYIINDSLGIIANAHVVFADREPDMAMSDPCKQL 884
Query: 485 AKLFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPLS 306
A+LFSIAVDFPKTGVPAEIPS+L +EYPDFMEK DKPTY S KV+GKLF++VK+ P +
Sbjct: 885 AQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFMEKPDKPTYPSEKVIGKLFQKVKNKTPQA 944
Query: 305 SCITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLAR 126
S I +FT DVA++ YD DM VDG+E Y+D+A +YK +YD KLG LM YG+KTEAE+L+
Sbjct: 945 SSIATFTRDVARKSYDSDMIVDGFEDYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSG 1004
Query: 125 GIVKASVSFNRKQDLDAIGVALRALRKEARGWLEEK 18
GI+KAS +F+R++D +AIGVA+R LRKEAR W + +
Sbjct: 1005 GIMKASKTFDRRKDAEAIGVAVRCLRKEARAWFKRR 1040
>ref|XP_008381760.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Malus domestica]
gi|657979585|ref|XP_008381761.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Malus domestica]
Length = 1114
Score = 547 bits (1409), Expect = e-153
Identities = 265/396 (66%), Positives = 320/396 (80%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
+AL++MSPGE N+LKE+L CGYKPD EP+LSMMLQTFR SKLL+LR K+RI++ DGR++
Sbjct: 652 DALDLMSPGETTNILKELLTCGYKPDVEPFLSMMLQTFRASKLLDLRLKTRIFIPDGRAM 711
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQGQNNSIHRTRSNQSTRIVEETVVVAKNPCLHPGD 840
+GCLDETGTLEYG+VF+Q+S G + + S H +E VVVAKNPCLHPGD
Sbjct: 712 MGCLDETGTLEYGEVFVQLS--GNRHPGSASNH----------IEGKVVVAKNPCLHPGD 759
Query: 839 VRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQIQPM 660
VRVL+AV+V LHHMVDCVVFP+KG RPHPNECSGSDLDGDIYFV WD ELIP RQIQPM
Sbjct: 760 VRVLKAVNVPELHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDQELIPRRQIQPM 819
Query: 659 DYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTELAK 480
DYTPAP+ LDHDV +E+V+EYF NYM+NDSLGIIANAHT FADK+ A+S+ C ELAK
Sbjct: 820 DYTPAPSMELDHDVTMEEVEEYFVNYMINDSLGIIANAHTVFADKDPLKAMSEPCKELAK 879
Query: 479 LFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPLSSC 300
LFSIAVDFPKTGVPA IP+ LYV+E+PDFMEK DKPTY+S V+G LF+EVKDI P S
Sbjct: 880 LFSIAVDFPKTGVPAVIPAHLYVKEFPDFMEKHDKPTYQSCNVIGALFQEVKDIAPHDSS 939
Query: 299 ITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLARGI 120
I SFT VAK+ YD DMEVDG+E Y++DA +YK YD KLG LM YG+KTEAE+L+ +
Sbjct: 940 IRSFTRQVAKQSYDPDMEVDGFEDYIEDAIYYKGNYDYKLGNLMDYYGIKTEAEILSGSV 999
Query: 119 VKASVSFNRKQDLDAIGVALRALRKEARGWLEEKGS 12
++ S SF +++D D+I +A+R+LRKEAR W EKG+
Sbjct: 1000 MRMSKSFTKRRDADSINMAVRSLRKEARAWFNEKGT 1035
>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
gi|778697870|ref|XP_011654423.1| PREDICTED: RNA-dependent
RNA polymerase 1-like isoform X1 [Cucumis sativus]
gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
1a [Cucumis sativus] gi|948561973|gb|ALM88233.1|
RNA-dependent RNA polymerase 1a [Cucumis sativus]
Length = 1130
Score = 547 bits (1409), Expect = e-153
Identities = 267/400 (66%), Positives = 319/400 (79%), Gaps = 1/400 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EALE+MSPGEN N+LKEML CGY+PD EPYLSMMLQTFR SKLLELR KSRI++ +GR++
Sbjct: 655 EALELMSPGENTNILKEMLKCGYQPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAM 714
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQGQNNSIHRTRSNQSTRIVEETVVVAKNPCLHPGD 840
+GCLDET TLEYGQVF+Q+S + + + ++E V VAKNPCLHPGD
Sbjct: 715 MGCLDETRTLEYGQVFVQISSGRHRNLSESFAFNRIGREHHLVIEGNVTVAKNPCLHPGD 774
Query: 839 VRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQIQPM 660
VRVL+AV++ GL+HMVDCVVFP+KG RPHPNECSGSDLDGDIYFV WD ELIP RQI PM
Sbjct: 775 VRVLKAVNIPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPSRQIPPM 834
Query: 659 DYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTELAK 480
DYTPAP LD DV ED+QEYF NYMVNDSLGIIANAHTAFADKE A S C ELAK
Sbjct: 835 DYTPAPPNELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCLELAK 894
Query: 479 LFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPLSSC 300
LFS+AVDFPKTGVPA IPS LYV+E+PDFMEK D+P+YESNKV+GKLFR VKDI P S
Sbjct: 895 LFSVAVDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESNKVIGKLFRAVKDIAPTLSH 954
Query: 299 ITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLARGI 120
I SFT DVA+ CYD DMEV+G+E Y++DA ++K YD KLG L+ YG+K+EAE+L+ I
Sbjct: 955 IRSFTRDVARRCYDCDMEVEGFEDYVEDAFYHKSNYDYKLGNLLDYYGIKSEAEVLSGSI 1014
Query: 119 VKASVSFNRKQDLDAIGVALRALRKEARGWLE-EKGSNSS 3
++ S SF R++D +AI +A+R+LRKEAR W +G++S+
Sbjct: 1015 MRMSKSFTRRRDAEAINLAVRSLRKEARTWFNAREGADSN 1054
>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 546 bits (1407), Expect = e-152
Identities = 272/396 (68%), Positives = 316/396 (79%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EALE+MSPGEN N+LKEML+CGY+PD EP+LSMMLQTFR SKLLELR KSRI+V +GRS+
Sbjct: 650 EALELMSPGENTNILKEMLLCGYEPDAEPFLSMMLQTFRASKLLELRTKSRIFVANGRSM 709
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQGQNNSIHRTRSNQSTRIVEETVVVAKNPCLHPGD 840
+GCLDET TL+YGQVF+QVS +RS Q IV+ VVVAKNPCLHPGD
Sbjct: 710 MGCLDETRTLDYGQVFVQVSG-------------SRSEQRF-IVQGKVVVAKNPCLHPGD 755
Query: 839 VRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQIQPM 660
VRVL AV+V LHHMVDCVVFP+KG RPHPNECSGSDLDGDIYFV WDPELIP +QI PM
Sbjct: 756 VRVLTAVNVPDLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPSKQIPPM 815
Query: 659 DYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTELAK 480
DY+PAP L+H+V IE+V+EYFTNY+VNDSLGIIANAHT FAD+E A+S C LAK
Sbjct: 816 DYSPAPTKPLEHEVTIEEVEEYFTNYIVNDSLGIIANAHTVFADREPRKAMSSECKWLAK 875
Query: 479 LFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPLSSC 300
LFSIAVDFPKTGVPAEIP L V+EYPDFMEK DKPTY+S V+GKLFREVKD+ P
Sbjct: 876 LFSIAVDFPKTGVPAEIPQELRVKEYPDFMEKPDKPTYQSYNVIGKLFREVKDLAPNECF 935
Query: 299 ITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLARGI 120
I S T + + YD DMEVDGYE Y+DDA ++K YD KLG LM YG+KTEAE+L+ GI
Sbjct: 936 IRSLTRERLERFYDPDMEVDGYEDYVDDAFYHKSNYDYKLGNLMEYYGIKTEAEILSGGI 995
Query: 119 VKASVSFNRKQDLDAIGVALRALRKEARGWLEEKGS 12
+K S SF +++D +AIGVA+R+LRKEAR W EKG+
Sbjct: 996 MKMSRSFTKQRDAEAIGVAVRSLRKEARSWFNEKGN 1031
>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
[Solanum lycopersicum]
Length = 1114
Score = 546 bits (1406), Expect = e-152
Identities = 262/396 (66%), Positives = 326/396 (82%), Gaps = 2/396 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EALE+MSPGEN N+LK ML CGYKPD EP+LSMMLQTFR SKLL+LR +SRI++ +GR++
Sbjct: 643 EALELMSPGENTNILKAMLNCGYKPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRTM 702
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQGQNN--SIHRTRSNQSTRIVEETVVVAKNPCLHP 846
+GCLDE+ TLEYGQVF+Q + G + ++ + +RS S I++ VVVAKNPCLHP
Sbjct: 703 MGCLDESRTLEYGQVFVQFTGAGHGEFSDDLHPFNNSRSTNSNFILKGNVVVAKNPCLHP 762
Query: 845 GDVRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQIQ 666
GD+RVL+AV+V+ LHHMVDCVVFP+KG RPHPNECSGSDLDGDIYFV WD ++IPPRQ+Q
Sbjct: 763 GDIRVLKAVNVRALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQ 822
Query: 665 PMDYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTEL 486
PM+Y PAP+ LDHDV IE+V+EYFTNY+VNDSLGIIANAH FAD+E MA+SD C +L
Sbjct: 823 PMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKL 882
Query: 485 AKLFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPLS 306
A+LFSIAVDFPKTGVPAEIPS+L +EYPDFM+K DK +Y S +V+GKLFR+VKD P +
Sbjct: 883 AELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMDKPDKTSYISERVIGKLFRKVKDKAPQA 942
Query: 305 SCITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLAR 126
S I +FT DVA+ YD DMEVDG+E Y+D+A YK +YD KLG LM YG+KTEAE+L+
Sbjct: 943 SSIATFTRDVARRSYDADMEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSG 1002
Query: 125 GIVKASVSFNRKQDLDAIGVALRALRKEARGWLEEK 18
GI+KAS +F+R++D +AI VA+RALRKEAR W + +
Sbjct: 1003 GIMKASKTFDRRKDAEAISVAVRALRKEARAWFKRR 1038
>ref|XP_012072325.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Jatropha curcas]
Length = 1096
Score = 544 bits (1402), Expect = e-152
Identities = 264/397 (66%), Positives = 317/397 (79%), Gaps = 1/397 (0%)
Frame = -3
Query: 1199 EALEIMSPGENVNVLKEMLMCGYKPDKEPYLSMMLQTFRTSKLLELRKKSRIYVQDGRSL 1020
EAL++MSPGE N+L EML+CGY+PD EP+LSMMLQ FR SKLL+LR KSRI+V +GRS+
Sbjct: 625 EALDLMSPGETTNILNEMLLCGYQPDAEPFLSMMLQMFRASKLLDLRTKSRIFVPNGRSM 684
Query: 1019 IGCLDETGTLEYGQVFIQVSRIGCKQGQNNSIHRTRSNQSTR-IVEETVVVAKNPCLHPG 843
+GCLDET LEYGQVF+Q S KQ +NS R ++E V+VAKNPCLHPG
Sbjct: 685 MGCLDETRNLEYGQVFVQFSGSKHKQVYDNSTMFGGIGSGNRFVIEGKVIVAKNPCLHPG 744
Query: 842 DVRVLRAVDVQGLHHMVDCVVFPKKGIRPHPNECSGSDLDGDIYFVSWDPELIPPRQIQP 663
D+RVLRAV+V LHHMVDCVVFP+KG RPHPNECSGSDLDGDIYFV WDP+LIP QI P
Sbjct: 745 DIRVLRAVNVPDLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPRLQIPP 804
Query: 662 MDYTPAPAAILDHDVLIEDVQEYFTNYMVNDSLGIIANAHTAFADKEASMALSDSCTELA 483
MDYTP P+ LDHDV I++V+EYFTNY++NDSLGII+NAHT FAD+E + A+S C ELA
Sbjct: 805 MDYTPEPSLQLDHDVTIQEVEEYFTNYILNDSLGIISNAHTVFADREPAKAMSKPCLELA 864
Query: 482 KLFSIAVDFPKTGVPAEIPSRLYVREYPDFMEKLDKPTYESNKVLGKLFREVKDIVPLSS 303
FSIAVDFPKTGVPAEI S L V+EYPDFMEK DKPTYES V+GKLFR V+DI P +S
Sbjct: 865 SKFSIAVDFPKTGVPAEIHSHLRVKEYPDFMEKPDKPTYESQNVIGKLFRAVRDIAPHTS 924
Query: 302 CITSFTWDVAKECYDRDMEVDGYEFYLDDACFYKEKYDLKLGRLMGCYGVKTEAELLARG 123
I SFT +VA++CYD DMEVDG+E Y+DDA +YK YD KLG M YG++TEAE+L
Sbjct: 925 SIKSFTLEVARQCYDPDMEVDGFEDYIDDAFYYKTNYDYKLGNHMDYYGIRTEAEILGGS 984
Query: 122 IVKASVSFNRKQDLDAIGVALRALRKEARGWLEEKGS 12
I+K S +F +K+D +AIG+A+R+LRKEAR W +E+GS
Sbjct: 985 IMKMSKAFTKKRDAEAIGLAVRSLRKEARSWFKERGS 1021