BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00005386
         (2253 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010653838.1| PREDICTED: CCR4-NOT transcription complex su...   796   0.0  
ref|XP_010653834.1| PREDICTED: CCR4-NOT transcription complex su...   796   0.0  
ref|XP_010276417.1| PREDICTED: CCR4-NOT transcription complex su...   786   0.0  
ref|XP_010276413.1| PREDICTED: CCR4-NOT transcription complex su...   786   0.0  
ref|XP_010257715.1| PREDICTED: CCR4-NOT transcription complex su...   780   0.0  
ref|XP_010257710.1| PREDICTED: CCR4-NOT transcription complex su...   780   0.0  
ref|XP_010276416.1| PREDICTED: CCR4-NOT transcription complex su...   772   0.0  
ref|XP_006443391.1| hypothetical protein CICLE_v10018788mg [Citr...   769   0.0  
ref|XP_006443389.1| hypothetical protein CICLE_v10018788mg [Citr...   769   0.0  
ref|XP_006443392.1| hypothetical protein CICLE_v10018788mg [Citr...   767   0.0  
ref|XP_006443390.1| hypothetical protein CICLE_v10018788mg [Citr...   767   0.0  
ref|XP_012092684.1| PREDICTED: general negative regulator of tra...   758   0.0  
ref|XP_008240363.1| PREDICTED: CCR4-NOT transcription complex su...   755   0.0  
ref|XP_002525444.1| conserved hypothetical protein [Ricinus comm...   747   0.0  
ref|XP_012092685.1| PREDICTED: CCR4-NOT transcription complex su...   742   0.0  
ref|XP_011464447.1| PREDICTED: CCR4-NOT transcription complex su...   742   0.0  
ref|XP_007030699.1| Transcription regulator NOT2/NOT3/NOT5 famil...   735   0.0  
gb|KHG12526.1| CCR4-NOT transcription complex subunit 3 [Gossypi...   716   0.0  
ref|XP_012463119.1| PREDICTED: CCR4-NOT transcription complex su...   715   0.0  
ref|XP_012463116.1| PREDICTED: general negative regulator of tra...   715   0.0  

>ref|XP_010653838.1| PREDICTED: CCR4-NOT transcription complex subunit 3 isoform X2 [Vitis
            vinifera]
          Length = 890

 Score =  796 bits (2057), Expect = 0.0
 Identities = 429/757 (56%), Positives = 514/757 (67%), Gaps = 20/757 (2%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EAEIEGLSVKKGKTRPPRL HLETSIARHKAHIMKLELILRLLDND+LSPEQVNDV+DFL
Sbjct: 143  EAEIEGLSVKKGKTRPPRLTHLETSIARHKAHIMKLELILRLLDNDELSPEQVNDVKDFL 202

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            +DYVERNQ+DFEEFSDVD+LY+SLPLDKVESLEDL  IG P                   
Sbjct: 203  DDYVERNQEDFEEFSDVDDLYNSLPLDKVESLEDLVTIGAPGLVKGAPALSLKNSLTPTQ 262

Query: 1891 SPIXXXXXXXXXXXXXXXXQ-----DNNAEIPPKTPPSKSGVLXXXXXXXXXXXXXXALT 1727
             P                 +     D+N+EI P+TPP+K+ V+               + 
Sbjct: 263  IPATVTSPLQQSTSIQEQSEETASQDSNSEIGPRTPPAKNSVIGSSASSTPTGSHATPIP 322

Query: 1726 INTTAGSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEEI-----RQSS 1562
            +N +A +++  + +P       SV   L+N              + KEEEI     R+SS
Sbjct: 323  LNVSAHNLSA-SPAPTILPSSTSVRGVLENAGTAISSPVNVSSSA-KEEEIASFPGRRSS 380

Query: 1561 PVLAETXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLAKRGNSG 1382
            P L ET                  Q   ++P S GITI            +D++KR   G
Sbjct: 381  PALVETGLVRGIGRGVPSS-----QPSTSVPLSSGITIPSNGGLGAVPSANDMSKRSTLG 435

Query: 1381 LDERTGSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFSPSVVPG 1202
             DER G  G+ QP+ SPLSNR++LPQ  K++D  G  D ++VGE AV+ GR+FSPSVVPG
Sbjct: 436  ADERLGGGGMVQPLVSPLSNRMILPQTAKTNDGTGLADSSSVGEAAVIAGRVFSPSVVPG 495

Query: 1201 VQWRPPSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQHHTNL-------LTGG-- 1049
            +QWRP  GSSF N NE+GQFRGRTEIT DQ+EKFLQRLQQVQ  T         L+GG  
Sbjct: 496  MQWRP--GSSFQNQNESGQFRGRTEITLDQKEKFLQRLQQVQQQTQSTILGMPPLSGGNH 553

Query: 1048 KXXXXXXXXXXXXXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQL-PSSIHQQSTQLS 872
            K                     SPQVGLG+G+Q+PGLN V SA++Q  P SIHQQS Q +
Sbjct: 554  KQFSAQQQNPLLQQFNSQSSSVSPQVGLGVGVQAPGLNTVTSAAIQQQPGSIHQQSNQQA 613

Query: 871  LMSNGPNDSDISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAG 692
            L+S GP D+D+     E+Q+QQQ+  +DS+MESA S  L KN+M +++ K  Y++D +AG
Sbjct: 614  LLSTGPKDADVGHVKAEDQQQQQNVSDDSTMESAPS-SLGKNLMNEDDLKAPYAMDTSAG 672

Query: 691  GSSPLTEVAQIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGV 512
             S  LTE +Q+PRDTDL+PGQP+QS+Q S +LGVIGRRS  DLGAIGD +SGS   SGG+
Sbjct: 673  VSGSLTEPSQVPRDTDLSPGQPVQSNQPSGSLGVIGRRSISDLGAIGDTLSGSAVNSGGM 732

Query: 511  HDQMYNLQMLEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGM 332
            HDQ+YNLQMLEAA+YKLPQPKDSER ++Y PRHP  TP SYPQ Q PI  NPAFWERLG+
Sbjct: 733  HDQLYNLQMLEAAFYKLPQPKDSERARNYTPRHPAVTPPSYPQVQAPIVNNPAFWERLGL 792

Query: 331  ESWGTDTLFFSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGT 152
            +++GTDTLFF+FYYQQNTYQQYLAA+ELK+QSWRYHRKYNTWFQRHEEPKV TDEFEQGT
Sbjct: 793  DTFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEFEQGT 852

Query: 151  YVYFDFHTANDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            YVYFDFH ANDDLQ GW QRIKTEFTFEY+YLEDEL+
Sbjct: 853  YVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELI 889


>ref|XP_010653834.1| PREDICTED: CCR4-NOT transcription complex subunit 3 isoform X1 [Vitis
            vinifera] gi|731400056|ref|XP_010653835.1| PREDICTED:
            CCR4-NOT transcription complex subunit 3 isoform X1
            [Vitis vinifera] gi|731400060|ref|XP_010653836.1|
            PREDICTED: CCR4-NOT transcription complex subunit 3
            isoform X1 [Vitis vinifera]
            gi|731400062|ref|XP_010653837.1| PREDICTED: CCR4-NOT
            transcription complex subunit 3 isoform X1 [Vitis
            vinifera] gi|297739742|emb|CBI29924.3| unnamed protein
            product [Vitis vinifera]
          Length = 897

 Score =  796 bits (2057), Expect = 0.0
 Identities = 429/757 (56%), Positives = 514/757 (67%), Gaps = 20/757 (2%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EAEIEGLSVKKGKTRPPRL HLETSIARHKAHIMKLELILRLLDND+LSPEQVNDV+DFL
Sbjct: 150  EAEIEGLSVKKGKTRPPRLTHLETSIARHKAHIMKLELILRLLDNDELSPEQVNDVKDFL 209

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            +DYVERNQ+DFEEFSDVD+LY+SLPLDKVESLEDL  IG P                   
Sbjct: 210  DDYVERNQEDFEEFSDVDDLYNSLPLDKVESLEDLVTIGAPGLVKGAPALSLKNSLTPTQ 269

Query: 1891 SPIXXXXXXXXXXXXXXXXQ-----DNNAEIPPKTPPSKSGVLXXXXXXXXXXXXXXALT 1727
             P                 +     D+N+EI P+TPP+K+ V+               + 
Sbjct: 270  IPATVTSPLQQSTSIQEQSEETASQDSNSEIGPRTPPAKNSVIGSSASSTPTGSHATPIP 329

Query: 1726 INTTAGSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEEI-----RQSS 1562
            +N +A +++  + +P       SV   L+N              + KEEEI     R+SS
Sbjct: 330  LNVSAHNLSA-SPAPTILPSSTSVRGVLENAGTAISSPVNVSSSA-KEEEIASFPGRRSS 387

Query: 1561 PVLAETXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLAKRGNSG 1382
            P L ET                  Q   ++P S GITI            +D++KR   G
Sbjct: 388  PALVETGLVRGIGRGVPSS-----QPSTSVPLSSGITIPSNGGLGAVPSANDMSKRSTLG 442

Query: 1381 LDERTGSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFSPSVVPG 1202
             DER G  G+ QP+ SPLSNR++LPQ  K++D  G  D ++VGE AV+ GR+FSPSVVPG
Sbjct: 443  ADERLGGGGMVQPLVSPLSNRMILPQTAKTNDGTGLADSSSVGEAAVIAGRVFSPSVVPG 502

Query: 1201 VQWRPPSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQHHTNL-------LTGG-- 1049
            +QWRP  GSSF N NE+GQFRGRTEIT DQ+EKFLQRLQQVQ  T         L+GG  
Sbjct: 503  MQWRP--GSSFQNQNESGQFRGRTEITLDQKEKFLQRLQQVQQQTQSTILGMPPLSGGNH 560

Query: 1048 KXXXXXXXXXXXXXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQL-PSSIHQQSTQLS 872
            K                     SPQVGLG+G+Q+PGLN V SA++Q  P SIHQQS Q +
Sbjct: 561  KQFSAQQQNPLLQQFNSQSSSVSPQVGLGVGVQAPGLNTVTSAAIQQQPGSIHQQSNQQA 620

Query: 871  LMSNGPNDSDISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAG 692
            L+S GP D+D+     E+Q+QQQ+  +DS+MESA S  L KN+M +++ K  Y++D +AG
Sbjct: 621  LLSTGPKDADVGHVKAEDQQQQQNVSDDSTMESAPS-SLGKNLMNEDDLKAPYAMDTSAG 679

Query: 691  GSSPLTEVAQIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGV 512
             S  LTE +Q+PRDTDL+PGQP+QS+Q S +LGVIGRRS  DLGAIGD +SGS   SGG+
Sbjct: 680  VSGSLTEPSQVPRDTDLSPGQPVQSNQPSGSLGVIGRRSISDLGAIGDTLSGSAVNSGGM 739

Query: 511  HDQMYNLQMLEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGM 332
            HDQ+YNLQMLEAA+YKLPQPKDSER ++Y PRHP  TP SYPQ Q PI  NPAFWERLG+
Sbjct: 740  HDQLYNLQMLEAAFYKLPQPKDSERARNYTPRHPAVTPPSYPQVQAPIVNNPAFWERLGL 799

Query: 331  ESWGTDTLFFSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGT 152
            +++GTDTLFF+FYYQQNTYQQYLAA+ELK+QSWRYHRKYNTWFQRHEEPKV TDEFEQGT
Sbjct: 800  DTFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEFEQGT 859

Query: 151  YVYFDFHTANDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            YVYFDFH ANDDLQ GW QRIKTEFTFEY+YLEDEL+
Sbjct: 860  YVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELI 896


>ref|XP_010276417.1| PREDICTED: CCR4-NOT transcription complex subunit 3-like isoform X3
            [Nelumbo nucifera]
          Length = 885

 Score =  786 bits (2031), Expect = 0.0
 Identities = 429/753 (56%), Positives = 494/753 (65%), Gaps = 16/753 (2%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EA+IEGLSVKKGK RPPRL HLETSI RHKAHIMKLELILRLLDND+LSPEQVNDVRDFL
Sbjct: 143  EADIEGLSVKKGKARPPRLTHLETSITRHKAHIMKLELILRLLDNDELSPEQVNDVRDFL 202

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            EDYVERNQ+DFEEFSDVDELY+SLPLDKVESLEDL  IGPP                   
Sbjct: 203  EDYVERNQEDFEEFSDVDELYNSLPLDKVESLEDLVTIGPPGLAKGVGSASAVLSLKTSI 262

Query: 1891 SP-----------IXXXXXXXXXXXXXXXXQDNNAEIPPKTPPSKSGVLXXXXXXXXXXX 1745
            +                             QD+N++I P+TPPSK+GV+           
Sbjct: 263  AASPTQTLATSSSTVQQGTLNQDQAEETASQDSNSDIAPRTPPSKNGVVGSGASLIAAGS 322

Query: 1744 XXXALTINTTAGSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEE---- 1577
                LT N +  ++A G+T+    S P S+   LD               S KEE+    
Sbjct: 323  HATTLTSNISTRNLASGSTASAILSTPGSIRGVLDTSAATVSPSPVNLSNSTKEEDNTSF 382

Query: 1576 -IRQSSPVLAETXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLA 1400
              R+SSP LAET                  Q+ N  P   G  +             D++
Sbjct: 383  ASRRSSPSLAETGIGRGIGRGSIGGVSS--QTSNNTPLGSGSILPSNGALGAVPAVPDMS 440

Query: 1399 KRGNSGLDERTGSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFS 1220
            K+   G DERTGSSGI  P+ SPLSNR+LL Q++K +D     D  NV E   +GGR FS
Sbjct: 441  KKNTLGADERTGSSGIMPPLVSPLSNRMLLSQVSKGNDGTVSADSINVSEG--VGGRTFS 498

Query: 1219 PSVVPGVQWRPPSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQHHTNLLTGGKXX 1040
            PSVVPG QWRP  GSSFP+ N+ GQFR    + PDQREKFLQ+LQQVQ H+ L  G    
Sbjct: 499  PSVVPGAQWRP--GSSFPSQNDAGQFR----VQPDQREKFLQKLQQVQQHSQLAGGNHMQ 552

Query: 1039 XXXXXXXXXXXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQLPSSIHQQSTQLSLMSN 860
                               SP +GLGLG+Q PGLN V SASLQ P+ IHQQSTQ +L S 
Sbjct: 553  FNAQQQSSLLQQFNSQNSLSPHIGLGLGVQGPGLNAVASASLQQPNLIHQQSTQRALSSP 612

Query: 859  GPNDSDISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAGGSSP 680
             P +SD+    +++Q QQQ+  +DSS E   S G+NKN+M +++ KT YSVD   GGS  
Sbjct: 613  VPKESDVGHNKVDDQ-QQQNPSDDSSGEPTTSSGVNKNLMNEDDLKTPYSVDTPVGGSGS 671

Query: 679  LTEVAQIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGVHDQM 500
            L E AQ+PRDTDL+PGQPLQS+Q S  LGVIGRRS  DLGAIGDN+SGSTA S G+HD  
Sbjct: 672  LVEPAQVPRDTDLSPGQPLQSNQPSLGLGVIGRRSVSDLGAIGDNLSGSTANSAGMHDHT 731

Query: 499  YNLQMLEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGMESWG 320
            YN+QMLEAAYYKLPQPKDSER KSY PRHP  TP SYPQ Q PI +NPAFWERLG+++ G
Sbjct: 732  YNMQMLEAAYYKLPQPKDSERAKSYTPRHPAVTPLSYPQVQSPIVDNPAFWERLGVDTMG 791

Query: 319  TDTLFFSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGTYVYF 140
            TDTLFF+FY+QQNTYQQYLAARELKRQSWRYHRKY+TWFQRHEEP+VTTDE EQGTYVYF
Sbjct: 792  TDTLFFAFYFQQNTYQQYLAARELKRQSWRYHRKYSTWFQRHEEPRVTTDECEQGTYVYF 851

Query: 139  DFHTANDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            DFH  NDDLQ GW QRIKTEFTFEYSYLEDELV
Sbjct: 852  DFHIGNDDLQHGWCQRIKTEFTFEYSYLEDELV 884


>ref|XP_010276413.1| PREDICTED: CCR4-NOT transcription complex subunit 3-like isoform X1
            [Nelumbo nucifera] gi|720065980|ref|XP_010276414.1|
            PREDICTED: CCR4-NOT transcription complex subunit 3-like
            isoform X1 [Nelumbo nucifera]
            gi|720065983|ref|XP_010276415.1| PREDICTED: CCR4-NOT
            transcription complex subunit 3-like isoform X1 [Nelumbo
            nucifera]
          Length = 892

 Score =  786 bits (2031), Expect = 0.0
 Identities = 429/753 (56%), Positives = 494/753 (65%), Gaps = 16/753 (2%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EA+IEGLSVKKGK RPPRL HLETSI RHKAHIMKLELILRLLDND+LSPEQVNDVRDFL
Sbjct: 150  EADIEGLSVKKGKARPPRLTHLETSITRHKAHIMKLELILRLLDNDELSPEQVNDVRDFL 209

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            EDYVERNQ+DFEEFSDVDELY+SLPLDKVESLEDL  IGPP                   
Sbjct: 210  EDYVERNQEDFEEFSDVDELYNSLPLDKVESLEDLVTIGPPGLAKGVGSASAVLSLKTSI 269

Query: 1891 SP-----------IXXXXXXXXXXXXXXXXQDNNAEIPPKTPPSKSGVLXXXXXXXXXXX 1745
            +                             QD+N++I P+TPPSK+GV+           
Sbjct: 270  AASPTQTLATSSSTVQQGTLNQDQAEETASQDSNSDIAPRTPPSKNGVVGSGASLIAAGS 329

Query: 1744 XXXALTINTTAGSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEE---- 1577
                LT N +  ++A G+T+    S P S+   LD               S KEE+    
Sbjct: 330  HATTLTSNISTRNLASGSTASAILSTPGSIRGVLDTSAATVSPSPVNLSNSTKEEDNTSF 389

Query: 1576 -IRQSSPVLAETXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLA 1400
              R+SSP LAET                  Q+ N  P   G  +             D++
Sbjct: 390  ASRRSSPSLAETGIGRGIGRGSIGGVSS--QTSNNTPLGSGSILPSNGALGAVPAVPDMS 447

Query: 1399 KRGNSGLDERTGSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFS 1220
            K+   G DERTGSSGI  P+ SPLSNR+LL Q++K +D     D  NV E   +GGR FS
Sbjct: 448  KKNTLGADERTGSSGIMPPLVSPLSNRMLLSQVSKGNDGTVSADSINVSEG--VGGRTFS 505

Query: 1219 PSVVPGVQWRPPSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQHHTNLLTGGKXX 1040
            PSVVPG QWRP  GSSFP+ N+ GQFR    + PDQREKFLQ+LQQVQ H+ L  G    
Sbjct: 506  PSVVPGAQWRP--GSSFPSQNDAGQFR----VQPDQREKFLQKLQQVQQHSQLAGGNHMQ 559

Query: 1039 XXXXXXXXXXXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQLPSSIHQQSTQLSLMSN 860
                               SP +GLGLG+Q PGLN V SASLQ P+ IHQQSTQ +L S 
Sbjct: 560  FNAQQQSSLLQQFNSQNSLSPHIGLGLGVQGPGLNAVASASLQQPNLIHQQSTQRALSSP 619

Query: 859  GPNDSDISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAGGSSP 680
             P +SD+    +++Q QQQ+  +DSS E   S G+NKN+M +++ KT YSVD   GGS  
Sbjct: 620  VPKESDVGHNKVDDQ-QQQNPSDDSSGEPTTSSGVNKNLMNEDDLKTPYSVDTPVGGSGS 678

Query: 679  LTEVAQIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGVHDQM 500
            L E AQ+PRDTDL+PGQPLQS+Q S  LGVIGRRS  DLGAIGDN+SGSTA S G+HD  
Sbjct: 679  LVEPAQVPRDTDLSPGQPLQSNQPSLGLGVIGRRSVSDLGAIGDNLSGSTANSAGMHDHT 738

Query: 499  YNLQMLEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGMESWG 320
            YN+QMLEAAYYKLPQPKDSER KSY PRHP  TP SYPQ Q PI +NPAFWERLG+++ G
Sbjct: 739  YNMQMLEAAYYKLPQPKDSERAKSYTPRHPAVTPLSYPQVQSPIVDNPAFWERLGVDTMG 798

Query: 319  TDTLFFSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGTYVYF 140
            TDTLFF+FY+QQNTYQQYLAARELKRQSWRYHRKY+TWFQRHEEP+VTTDE EQGTYVYF
Sbjct: 799  TDTLFFAFYFQQNTYQQYLAARELKRQSWRYHRKYSTWFQRHEEPRVTTDECEQGTYVYF 858

Query: 139  DFHTANDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            DFH  NDDLQ GW QRIKTEFTFEYSYLEDELV
Sbjct: 859  DFHIGNDDLQHGWCQRIKTEFTFEYSYLEDELV 891


>ref|XP_010257715.1| PREDICTED: CCR4-NOT transcription complex subunit 3-like isoform X3
            [Nelumbo nucifera]
          Length = 889

 Score =  780 bits (2014), Expect = 0.0
 Identities = 428/758 (56%), Positives = 497/758 (65%), Gaps = 21/758 (2%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EA+IEGLSVKKGK RPPRL HLETSIARHKAHIMKLELILRLLDND+LSPEQVNDVRDFL
Sbjct: 143  EADIEGLSVKKGKARPPRLTHLETSIARHKAHIMKLELILRLLDNDELSPEQVNDVRDFL 202

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            +DYVERNQ+DFEEFSDVDELYSSLPLDKVESLEDL  + PP                   
Sbjct: 203  DDYVERNQEDFEEFSDVDELYSSLPLDKVESLEDLVTVVPPGLAKGVGSASAVLSLKTPI 262

Query: 1891 SP-----------IXXXXXXXXXXXXXXXXQDNNAEIPPKTPPSKSGVLXXXXXXXXXXX 1745
            +                             QD++++I P+TPPSK+  +           
Sbjct: 263  AASTTQMPATLASTVQQGNSIQDQAEESASQDSSSDIAPRTPPSKNSTVGSSTSSTPAGS 322

Query: 1744 XXXALTINTTAGSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEEI--- 1574
                +T N    ++AGG+T+    S P S+   +DN              S KEEE    
Sbjct: 323  HVATVTGNLPTRNLAGGSTTSAILSAPASIRGVVDNSVATVSPSPVNLSNSTKEEENSSF 382

Query: 1573 --RQSSPVLAETXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLA 1400
              R+ SP L E                    S N +P S G ++            SD+A
Sbjct: 383  PGRRPSPALTEIGVGRGIGRGSMAGGVPSQPS-NNVPLSSGSSLPGNGALGAVPTASDMA 441

Query: 1399 KRGNSGLDERTGSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFS 1220
            K+   G D     SGI QP+ SPLSNR+LLPQ++K +D  G  D NN GE AV+GGR+FS
Sbjct: 442  KKNILGAD-----SGIMQPLVSPLSNRILLPQVSKGNDGTGSADSNNSGEGAVVGGRVFS 496

Query: 1219 PSVVPGVQWRPPSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQH----HTNLLTG 1052
            PSVVPGVQWRP  G+SF   NE GQFR    + PDQREKFLQ+  QVQ     H+ L  G
Sbjct: 497  PSVVPGVQWRP--GTSFQTQNEAGQFR----VQPDQREKFLQKFHQVQQQQQQHSQLAGG 550

Query: 1051 G-KXXXXXXXXXXXXXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQLPSSIHQQSTQL 875
              K                     SPQVGLGLG+Q  GLN V SASLQ P+ IH Q+ Q 
Sbjct: 551  NHKQFTTQQQGSLLQQFNSQNSSLSPQVGLGLGVQGAGLNSVTSASLQQPNFIHPQAAQR 610

Query: 874  SLMSNGPNDSDISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTA 695
            +L S GP +SD S   +++Q+QQQ+  +DSS+E   S GL+KN+M +++ K+ YSVD   
Sbjct: 611  ALSSPGPKESDTSHTKVDDQQQQQNPSDDSSVEPTTSVGLSKNLMNEDDLKSPYSVDAPV 670

Query: 694  GGSSPLTEVAQIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGG 515
            GGS  L E AQ+PRDTDL+PGQPLQS+Q S  LGVIGRRSA DLGAIGDN+SGST  S G
Sbjct: 671  GGSGSLMEPAQVPRDTDLSPGQPLQSNQPSLGLGVIGRRSASDLGAIGDNLSGSTTNSTG 730

Query: 514  VHDQMYNLQMLEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLG 335
            +HDQ+YNLQMLEAAYYKLPQPKDSER KSYIPRHP  TP SYPQ Q PI +NPAFWERLG
Sbjct: 731  MHDQVYNLQMLEAAYYKLPQPKDSERAKSYIPRHPAVTPPSYPQMQAPIVDNPAFWERLG 790

Query: 334  MESWGTDTLFFSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQG 155
            +++ GTDTLFF+FY+QQNTYQQYLAARELK+QSWRYHRKYNTWFQRHEEP+VTTDE EQG
Sbjct: 791  VDTMGTDTLFFAFYFQQNTYQQYLAARELKKQSWRYHRKYNTWFQRHEEPRVTTDECEQG 850

Query: 154  TYVYFDFHTANDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            TYVYFDFH ANDD Q GW QRIKTEFTFEYSYLEDELV
Sbjct: 851  TYVYFDFHIANDDSQHGWCQRIKTEFTFEYSYLEDELV 888


>ref|XP_010257710.1| PREDICTED: CCR4-NOT transcription complex subunit 3-like isoform X1
            [Nelumbo nucifera] gi|720005606|ref|XP_010257711.1|
            PREDICTED: CCR4-NOT transcription complex subunit 3-like
            isoform X1 [Nelumbo nucifera]
            gi|720005612|ref|XP_010257712.1| PREDICTED: CCR4-NOT
            transcription complex subunit 3-like isoform X1 [Nelumbo
            nucifera]
          Length = 896

 Score =  780 bits (2014), Expect = 0.0
 Identities = 428/758 (56%), Positives = 497/758 (65%), Gaps = 21/758 (2%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EA+IEGLSVKKGK RPPRL HLETSIARHKAHIMKLELILRLLDND+LSPEQVNDVRDFL
Sbjct: 150  EADIEGLSVKKGKARPPRLTHLETSIARHKAHIMKLELILRLLDNDELSPEQVNDVRDFL 209

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            +DYVERNQ+DFEEFSDVDELYSSLPLDKVESLEDL  + PP                   
Sbjct: 210  DDYVERNQEDFEEFSDVDELYSSLPLDKVESLEDLVTVVPPGLAKGVGSASAVLSLKTPI 269

Query: 1891 SP-----------IXXXXXXXXXXXXXXXXQDNNAEIPPKTPPSKSGVLXXXXXXXXXXX 1745
            +                             QD++++I P+TPPSK+  +           
Sbjct: 270  AASTTQMPATLASTVQQGNSIQDQAEESASQDSSSDIAPRTPPSKNSTVGSSTSSTPAGS 329

Query: 1744 XXXALTINTTAGSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEEI--- 1574
                +T N    ++AGG+T+    S P S+   +DN              S KEEE    
Sbjct: 330  HVATVTGNLPTRNLAGGSTTSAILSAPASIRGVVDNSVATVSPSPVNLSNSTKEEENSSF 389

Query: 1573 --RQSSPVLAETXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLA 1400
              R+ SP L E                    S N +P S G ++            SD+A
Sbjct: 390  PGRRPSPALTEIGVGRGIGRGSMAGGVPSQPS-NNVPLSSGSSLPGNGALGAVPTASDMA 448

Query: 1399 KRGNSGLDERTGSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFS 1220
            K+   G D     SGI QP+ SPLSNR+LLPQ++K +D  G  D NN GE AV+GGR+FS
Sbjct: 449  KKNILGAD-----SGIMQPLVSPLSNRILLPQVSKGNDGTGSADSNNSGEGAVVGGRVFS 503

Query: 1219 PSVVPGVQWRPPSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQH----HTNLLTG 1052
            PSVVPGVQWRP  G+SF   NE GQFR    + PDQREKFLQ+  QVQ     H+ L  G
Sbjct: 504  PSVVPGVQWRP--GTSFQTQNEAGQFR----VQPDQREKFLQKFHQVQQQQQQHSQLAGG 557

Query: 1051 G-KXXXXXXXXXXXXXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQLPSSIHQQSTQL 875
              K                     SPQVGLGLG+Q  GLN V SASLQ P+ IH Q+ Q 
Sbjct: 558  NHKQFTTQQQGSLLQQFNSQNSSLSPQVGLGLGVQGAGLNSVTSASLQQPNFIHPQAAQR 617

Query: 874  SLMSNGPNDSDISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTA 695
            +L S GP +SD S   +++Q+QQQ+  +DSS+E   S GL+KN+M +++ K+ YSVD   
Sbjct: 618  ALSSPGPKESDTSHTKVDDQQQQQNPSDDSSVEPTTSVGLSKNLMNEDDLKSPYSVDAPV 677

Query: 694  GGSSPLTEVAQIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGG 515
            GGS  L E AQ+PRDTDL+PGQPLQS+Q S  LGVIGRRSA DLGAIGDN+SGST  S G
Sbjct: 678  GGSGSLMEPAQVPRDTDLSPGQPLQSNQPSLGLGVIGRRSASDLGAIGDNLSGSTTNSTG 737

Query: 514  VHDQMYNLQMLEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLG 335
            +HDQ+YNLQMLEAAYYKLPQPKDSER KSYIPRHP  TP SYPQ Q PI +NPAFWERLG
Sbjct: 738  MHDQVYNLQMLEAAYYKLPQPKDSERAKSYIPRHPAVTPPSYPQMQAPIVDNPAFWERLG 797

Query: 334  MESWGTDTLFFSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQG 155
            +++ GTDTLFF+FY+QQNTYQQYLAARELK+QSWRYHRKYNTWFQRHEEP+VTTDE EQG
Sbjct: 798  VDTMGTDTLFFAFYFQQNTYQQYLAARELKKQSWRYHRKYNTWFQRHEEPRVTTDECEQG 857

Query: 154  TYVYFDFHTANDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            TYVYFDFH ANDD Q GW QRIKTEFTFEYSYLEDELV
Sbjct: 858  TYVYFDFHIANDDSQHGWCQRIKTEFTFEYSYLEDELV 895


>ref|XP_010276416.1| PREDICTED: CCR4-NOT transcription complex subunit 3-like isoform X2
            [Nelumbo nucifera]
          Length = 888

 Score =  772 bits (1993), Expect = 0.0
 Identities = 425/753 (56%), Positives = 490/753 (65%), Gaps = 16/753 (2%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EA+IEGLSVKKGK RPPRL HLETSI RHKAHIMKLELILRLLDND+LSPEQVNDVRDFL
Sbjct: 150  EADIEGLSVKKGKARPPRLTHLETSITRHKAHIMKLELILRLLDNDELSPEQVNDVRDFL 209

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            EDYVERNQ+DFEEFSDVDELY+SLPLDKVESLEDL  IGPP                   
Sbjct: 210  EDYVERNQEDFEEFSDVDELYNSLPLDKVESLEDLVTIGPPGLAKGVGSASAVLSLKTSI 269

Query: 1891 SP-----------IXXXXXXXXXXXXXXXXQDNNAEIPPKTPPSKSGVLXXXXXXXXXXX 1745
            +                             QD+N++I P+TPPSK+GV+           
Sbjct: 270  AASPTQTLATSSSTVQQGTLNQDQAEETASQDSNSDIAPRTPPSKNGVVGSGASLIAAGS 329

Query: 1744 XXXALTINTTAGSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEE---- 1577
                LT N +  ++A G+T+    S P S+   LD               S KEE+    
Sbjct: 330  HATTLTSNISTRNLASGSTASAILSTPGSIRGVLDTSAATVSPSPVNLSNSTKEEDNTSF 389

Query: 1576 -IRQSSPVLAETXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLA 1400
              R+SSP LAET                  Q+ N  P   G  +             D++
Sbjct: 390  ASRRSSPSLAETGIGRGIGRGSIGGVSS--QTSNNTPLGSGSILPSNGALGAVPAVPDMS 447

Query: 1399 KRGNSGLDERTGSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFS 1220
            K+   G DERTGSSGI  P+ SPLSNR+LL Q++K +D     D  NV E   +GGR FS
Sbjct: 448  KKNTLGADERTGSSGIMPPLVSPLSNRMLLSQVSKGNDGTVSADSINVSEG--VGGRTFS 505

Query: 1219 PSVVPGVQWRPPSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQHHTNLLTGGKXX 1040
            PSVVPG QWRP  GSSFP+ N+ GQFR    + PDQREKFLQ+LQQVQ H+ L  G    
Sbjct: 506  PSVVPGAQWRP--GSSFPSQNDAGQFR----VQPDQREKFLQKLQQVQQHSQLAGGNHMQ 559

Query: 1039 XXXXXXXXXXXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQLPSSIHQQSTQLSLMSN 860
                               SP +GLGLG+Q PGLN V SASLQ P+ IHQQSTQ +L S 
Sbjct: 560  FNAQQQSSLLQQFNSQNSLSPHIGLGLGVQGPGLNAVASASLQQPNLIHQQSTQRALSSP 619

Query: 859  GPNDSDISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAGGSSP 680
             P +SD+    +++Q QQQ+  +DSS E   S G+NKN+M +++ KT YSVD   GGS  
Sbjct: 620  VPKESDVGHNKVDDQ-QQQNPSDDSSGEPTTSSGVNKNLMNEDDLKTPYSVDTPVGGSGS 678

Query: 679  LTEVAQIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGVHDQM 500
            L E AQ+PRDTDL+PGQPLQS+Q S  LGVIGRRS  DLGAIGDN+SGSTA S G+HD  
Sbjct: 679  LVEPAQVPRDTDLSPGQPLQSNQPSLGLGVIGRRSVSDLGAIGDNLSGSTANSAGMHDHT 738

Query: 499  YNLQMLEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGMESWG 320
            YN+QMLEAAYYKLPQPKDSER KSY PRHP  TP SYPQ Q PI +NPAFWERLG+++ G
Sbjct: 739  YNMQMLEAAYYKLPQPKDSERAKSYTPRHPAVTPLSYPQVQSPIVDNPAFWERLGVDTMG 798

Query: 319  TDTLFFSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGTYVYF 140
            TDTLFF+FY+Q    QQYLAARELKRQSWRYHRKY+TWFQRHEEP+VTTDE EQGTYVYF
Sbjct: 799  TDTLFFAFYFQ----QQYLAARELKRQSWRYHRKYSTWFQRHEEPRVTTDECEQGTYVYF 854

Query: 139  DFHTANDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            DFH  NDDLQ GW QRIKTEFTFEYSYLEDELV
Sbjct: 855  DFHIGNDDLQHGWCQRIKTEFTFEYSYLEDELV 887


>ref|XP_006443391.1| hypothetical protein CICLE_v10018788mg [Citrus clementina]
            gi|568850802|ref|XP_006479086.1| PREDICTED: CCR4-NOT
            transcription complex subunit 3-like isoform X3 [Citrus
            sinensis] gi|557545653|gb|ESR56631.1| hypothetical
            protein CICLE_v10018788mg [Citrus clementina]
          Length = 873

 Score =  769 bits (1986), Expect = 0.0
 Identities = 417/748 (55%), Positives = 498/748 (66%), Gaps = 11/748 (1%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EAE+EGL+VKKGKTRPPRL HLETSI RHKAHIMKLELILRLLDND+LSPEQVNDV+D L
Sbjct: 150  EAELEGLTVKKGKTRPPRLTHLETSITRHKAHIMKLELILRLLDNDELSPEQVNDVKDLL 209

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            EDYVERNQDDFEEFSDVDELY  LPLDKVESLEDL  IGPP                   
Sbjct: 210  EDYVERNQDDFEEFSDVDELYHLLPLDKVESLEDLVTIGPPGLVKATVISTHQQVTSVQE 269

Query: 1891 SPIXXXXXXXXXXXXXXXXQDNNAEIPPKTPPSKSGVLXXXXXXXXXXXXXXALTINTTA 1712
                               QD+N+++  +TPP+KS  +               ++IN  A
Sbjct: 270  Q------------GEDTASQDSNSDVAARTPPAKSSGVGSTASTPAVGPATP-ISINVPA 316

Query: 1711 GSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEEI-----RQSSPVLAE 1547
             +++  + + P   G  SV    DN              S KEE++     R+SSP L +
Sbjct: 317  QTLSNASNTSPVLPGSSSVRGVFDNTGPISSSPPVNLTSSTKEEDVGNFPGRRSSPSLTD 376

Query: 1546 TXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLAKRGNSGLDERT 1367
                               Q  ++IP S    +            SD+AKR   G +ER 
Sbjct: 377  VRVMGRGGLSS--------QPSSSIPLSSATAVPSNGNLGAVPLVSDVAKRNILGAEERL 428

Query: 1366 GSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFSPSVVPGVQWRP 1187
            GSSG+ Q + SPLSNR++L Q  K +D  G  D NN GE   + GR+F+PS+  G+QWR 
Sbjct: 429  GSSGMVQSLVSPLSNRMILSQAAKGNDGTGSIDSNNAGETVAMAGRVFTPSM--GMQWR- 485

Query: 1186 PSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQH--HTNLL---TGGKXXXXXXXX 1022
             +G+SF N NE GQFRGRTEI PDQREKFLQRLQQVQ   H+NLL    GG         
Sbjct: 486  -TGNSFQNQNEPGQFRGRTEIAPDQREKFLQRLQQVQQQGHSNLLGMPLGGNKQFSSQQN 544

Query: 1021 XXXXXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQL-PSSIHQQSTQLSLMSNGPNDS 845
                         S Q GLGLG+Q+PG+N V SASLQ  P+SIHQQS+Q +LMS G  D+
Sbjct: 545  PLLQQFNSQGSSISAQAGLGLGVQAPGMNSVTSASLQQQPNSIHQQSSQQTLMSGGQKDA 604

Query: 844  DISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAGGSSPLTEVA 665
            D+S   +EE +  Q+  E+S+ ESA SPGL KN++ +++ K  Y++D + G S+ LTE A
Sbjct: 605  DVSHLKVEEPQPPQNLPEESTPESASSPGLGKNLIHEDDLKAPYAIDSSTGVSASLTEPA 664

Query: 664  QIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGVHDQMYNLQM 485
            Q+ RDTDL+PGQPLQSSQ S  LGVIGRRS  DLGAIGD++SG+T +SGG+HDQMYN+QM
Sbjct: 665  QVVRDTDLSPGQPLQSSQPSGGLGVIGRRSVSDLGAIGDSLSGATVSSGGMHDQMYNMQM 724

Query: 484  LEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGMESWGTDTLF 305
            LE+A+YKLPQPKDSER +SYIPRHP  TP SYPQ Q PI  NPAFWERL ++S+GTDTLF
Sbjct: 725  LESAFYKLPQPKDSERARSYIPRHPAVTPPSYPQVQAPIVSNPAFWERLSLDSYGTDTLF 784

Query: 304  FSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGTYVYFDFHTA 125
            F+FYYQQNTYQQYLAA+ELK+QSWRYHRKYNTWFQRHEEPKV  DEFEQGTYVYFDFH A
Sbjct: 785  FAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVANDEFEQGTYVYFDFHIA 844

Query: 124  NDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            NDDLQ GW QRIKTEFTFEY+YLEDEL+
Sbjct: 845  NDDLQHGWCQRIKTEFTFEYNYLEDELI 872


>ref|XP_006443389.1| hypothetical protein CICLE_v10018788mg [Citrus clementina]
            gi|557545651|gb|ESR56629.1| hypothetical protein
            CICLE_v10018788mg [Citrus clementina]
          Length = 866

 Score =  769 bits (1986), Expect = 0.0
 Identities = 417/748 (55%), Positives = 498/748 (66%), Gaps = 11/748 (1%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EAE+EGL+VKKGKTRPPRL HLETSI RHKAHIMKLELILRLLDND+LSPEQVNDV+D L
Sbjct: 143  EAELEGLTVKKGKTRPPRLTHLETSITRHKAHIMKLELILRLLDNDELSPEQVNDVKDLL 202

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            EDYVERNQDDFEEFSDVDELY  LPLDKVESLEDL  IGPP                   
Sbjct: 203  EDYVERNQDDFEEFSDVDELYHLLPLDKVESLEDLVTIGPPGLVKATVISTHQQVTSVQE 262

Query: 1891 SPIXXXXXXXXXXXXXXXXQDNNAEIPPKTPPSKSGVLXXXXXXXXXXXXXXALTINTTA 1712
                               QD+N+++  +TPP+KS  +               ++IN  A
Sbjct: 263  Q------------GEDTASQDSNSDVAARTPPAKSSGVGSTASTPAVGPATP-ISINVPA 309

Query: 1711 GSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEEI-----RQSSPVLAE 1547
             +++  + + P   G  SV    DN              S KEE++     R+SSP L +
Sbjct: 310  QTLSNASNTSPVLPGSSSVRGVFDNTGPISSSPPVNLTSSTKEEDVGNFPGRRSSPSLTD 369

Query: 1546 TXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLAKRGNSGLDERT 1367
                               Q  ++IP S    +            SD+AKR   G +ER 
Sbjct: 370  VRVMGRGGLSS--------QPSSSIPLSSATAVPSNGNLGAVPLVSDVAKRNILGAEERL 421

Query: 1366 GSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFSPSVVPGVQWRP 1187
            GSSG+ Q + SPLSNR++L Q  K +D  G  D NN GE   + GR+F+PS+  G+QWR 
Sbjct: 422  GSSGMVQSLVSPLSNRMILSQAAKGNDGTGSIDSNNAGETVAMAGRVFTPSM--GMQWR- 478

Query: 1186 PSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQH--HTNLL---TGGKXXXXXXXX 1022
             +G+SF N NE GQFRGRTEI PDQREKFLQRLQQVQ   H+NLL    GG         
Sbjct: 479  -TGNSFQNQNEPGQFRGRTEIAPDQREKFLQRLQQVQQQGHSNLLGMPLGGNKQFSSQQN 537

Query: 1021 XXXXXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQL-PSSIHQQSTQLSLMSNGPNDS 845
                         S Q GLGLG+Q+PG+N V SASLQ  P+SIHQQS+Q +LMS G  D+
Sbjct: 538  PLLQQFNSQGSSISAQAGLGLGVQAPGMNSVTSASLQQQPNSIHQQSSQQTLMSGGQKDA 597

Query: 844  DISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAGGSSPLTEVA 665
            D+S   +EE +  Q+  E+S+ ESA SPGL KN++ +++ K  Y++D + G S+ LTE A
Sbjct: 598  DVSHLKVEEPQPPQNLPEESTPESASSPGLGKNLIHEDDLKAPYAIDSSTGVSASLTEPA 657

Query: 664  QIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGVHDQMYNLQM 485
            Q+ RDTDL+PGQPLQSSQ S  LGVIGRRS  DLGAIGD++SG+T +SGG+HDQMYN+QM
Sbjct: 658  QVVRDTDLSPGQPLQSSQPSGGLGVIGRRSVSDLGAIGDSLSGATVSSGGMHDQMYNMQM 717

Query: 484  LEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGMESWGTDTLF 305
            LE+A+YKLPQPKDSER +SYIPRHP  TP SYPQ Q PI  NPAFWERL ++S+GTDTLF
Sbjct: 718  LESAFYKLPQPKDSERARSYIPRHPAVTPPSYPQVQAPIVSNPAFWERLSLDSYGTDTLF 777

Query: 304  FSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGTYVYFDFHTA 125
            F+FYYQQNTYQQYLAA+ELK+QSWRYHRKYNTWFQRHEEPKV  DEFEQGTYVYFDFH A
Sbjct: 778  FAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVANDEFEQGTYVYFDFHIA 837

Query: 124  NDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            NDDLQ GW QRIKTEFTFEY+YLEDEL+
Sbjct: 838  NDDLQHGWCQRIKTEFTFEYNYLEDELI 865


>ref|XP_006443392.1| hypothetical protein CICLE_v10018788mg [Citrus clementina]
            gi|568850798|ref|XP_006479084.1| PREDICTED: CCR4-NOT
            transcription complex subunit 3-like isoform X1 [Citrus
            sinensis] gi|557545654|gb|ESR56632.1| hypothetical
            protein CICLE_v10018788mg [Citrus clementina]
          Length = 892

 Score =  767 bits (1981), Expect = 0.0
 Identities = 418/755 (55%), Positives = 500/755 (66%), Gaps = 18/755 (2%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EAE+EGL+VKKGKTRPPRL HLETSI RHKAHIMKLELILRLLDND+LSPEQVNDV+D L
Sbjct: 150  EAELEGLTVKKGKTRPPRLTHLETSITRHKAHIMKLELILRLLDNDELSPEQVNDVKDLL 209

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            EDYVERNQDDFEEFSDVDELY  LPLDKVESLEDL  IGPP                   
Sbjct: 210  EDYVERNQDDFEEFSDVDELYHLLPLDKVESLEDLVTIGPPGLVKGAPALSLKASLAASA 269

Query: 1891 SPIXXXXXXXXXXXXXXXXQ-------DNNAEIPPKTPPSKSGVLXXXXXXXXXXXXXXA 1733
            S +                Q       D+N+++  +TPP+KS  +               
Sbjct: 270  SQMPATVISTHQQVTSVQEQGEDTASQDSNSDVAARTPPAKSSGVGSTASTPAVGPATP- 328

Query: 1732 LTINTTAGSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEEI-----RQ 1568
            ++IN  A +++  + + P   G  SV    DN              S KEE++     R+
Sbjct: 329  ISINVPAQTLSNASNTSPVLPGSSSVRGVFDNTGPISSSPPVNLTSSTKEEDVGNFPGRR 388

Query: 1567 SSPVLAETXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLAKRGN 1388
            SSP L +                   Q  ++IP S    +            SD+AKR  
Sbjct: 389  SSPSLTDVRVMGRGGLSS--------QPSSSIPLSSATAVPSNGNLGAVPLVSDVAKRNI 440

Query: 1387 SGLDERTGSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFSPSVV 1208
             G +ER GSSG+ Q + SPLSNR++L Q  K +D  G  D NN GE   + GR+F+PS+ 
Sbjct: 441  LGAEERLGSSGMVQSLVSPLSNRMILSQAAKGNDGTGSIDSNNAGETVAMAGRVFTPSM- 499

Query: 1207 PGVQWRPPSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQH--HTNLL---TGGKX 1043
             G+QWR  +G+SF N NE GQFRGRTEI PDQREKFLQRLQQVQ   H+NLL    GG  
Sbjct: 500  -GMQWR--TGNSFQNQNEPGQFRGRTEIAPDQREKFLQRLQQVQQQGHSNLLGMPLGGNK 556

Query: 1042 XXXXXXXXXXXXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQL-PSSIHQQSTQLSLM 866
                                S Q GLGLG+Q+PG+N V SASLQ  P+SIHQQS+Q +LM
Sbjct: 557  QFSSQQNPLLQQFNSQGSSISAQAGLGLGVQAPGMNSVTSASLQQQPNSIHQQSSQQTLM 616

Query: 865  SNGPNDSDISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAGGS 686
            S G  D+D+S   +EE +  Q+  E+S+ ESA SPGL KN++ +++ K  Y++D + G S
Sbjct: 617  SGGQKDADVSHLKVEEPQPPQNLPEESTPESASSPGLGKNLIHEDDLKAPYAIDSSTGVS 676

Query: 685  SPLTEVAQIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGVHD 506
            + LTE AQ+ RDTDL+PGQPLQSSQ S  LGVIGRRS  DLGAIGD++SG+T +SGG+HD
Sbjct: 677  ASLTEPAQVVRDTDLSPGQPLQSSQPSGGLGVIGRRSVSDLGAIGDSLSGATVSSGGMHD 736

Query: 505  QMYNLQMLEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGMES 326
            QMYN+QMLE+A+YKLPQPKDSER +SYIPRHP  TP SYPQ Q PI  NPAFWERL ++S
Sbjct: 737  QMYNMQMLESAFYKLPQPKDSERARSYIPRHPAVTPPSYPQVQAPIVSNPAFWERLSLDS 796

Query: 325  WGTDTLFFSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGTYV 146
            +GTDTLFF+FYYQQNTYQQYLAA+ELK+QSWRYHRKYNTWFQRHEEPKV  DEFEQGTYV
Sbjct: 797  YGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVANDEFEQGTYV 856

Query: 145  YFDFHTANDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            YFDFH ANDDLQ GW QRIKTEFTFEY+YLEDEL+
Sbjct: 857  YFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELI 891


>ref|XP_006443390.1| hypothetical protein CICLE_v10018788mg [Citrus clementina]
            gi|568850800|ref|XP_006479085.1| PREDICTED: CCR4-NOT
            transcription complex subunit 3-like isoform X2 [Citrus
            sinensis] gi|557545652|gb|ESR56630.1| hypothetical
            protein CICLE_v10018788mg [Citrus clementina]
          Length = 885

 Score =  767 bits (1981), Expect = 0.0
 Identities = 418/755 (55%), Positives = 500/755 (66%), Gaps = 18/755 (2%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EAE+EGL+VKKGKTRPPRL HLETSI RHKAHIMKLELILRLLDND+LSPEQVNDV+D L
Sbjct: 143  EAELEGLTVKKGKTRPPRLTHLETSITRHKAHIMKLELILRLLDNDELSPEQVNDVKDLL 202

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            EDYVERNQDDFEEFSDVDELY  LPLDKVESLEDL  IGPP                   
Sbjct: 203  EDYVERNQDDFEEFSDVDELYHLLPLDKVESLEDLVTIGPPGLVKGAPALSLKASLAASA 262

Query: 1891 SPIXXXXXXXXXXXXXXXXQ-------DNNAEIPPKTPPSKSGVLXXXXXXXXXXXXXXA 1733
            S +                Q       D+N+++  +TPP+KS  +               
Sbjct: 263  SQMPATVISTHQQVTSVQEQGEDTASQDSNSDVAARTPPAKSSGVGSTASTPAVGPATP- 321

Query: 1732 LTINTTAGSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEEI-----RQ 1568
            ++IN  A +++  + + P   G  SV    DN              S KEE++     R+
Sbjct: 322  ISINVPAQTLSNASNTSPVLPGSSSVRGVFDNTGPISSSPPVNLTSSTKEEDVGNFPGRR 381

Query: 1567 SSPVLAETXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLAKRGN 1388
            SSP L +                   Q  ++IP S    +            SD+AKR  
Sbjct: 382  SSPSLTDVRVMGRGGLSS--------QPSSSIPLSSATAVPSNGNLGAVPLVSDVAKRNI 433

Query: 1387 SGLDERTGSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFSPSVV 1208
             G +ER GSSG+ Q + SPLSNR++L Q  K +D  G  D NN GE   + GR+F+PS+ 
Sbjct: 434  LGAEERLGSSGMVQSLVSPLSNRMILSQAAKGNDGTGSIDSNNAGETVAMAGRVFTPSM- 492

Query: 1207 PGVQWRPPSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQH--HTNLL---TGGKX 1043
             G+QWR  +G+SF N NE GQFRGRTEI PDQREKFLQRLQQVQ   H+NLL    GG  
Sbjct: 493  -GMQWR--TGNSFQNQNEPGQFRGRTEIAPDQREKFLQRLQQVQQQGHSNLLGMPLGGNK 549

Query: 1042 XXXXXXXXXXXXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQL-PSSIHQQSTQLSLM 866
                                S Q GLGLG+Q+PG+N V SASLQ  P+SIHQQS+Q +LM
Sbjct: 550  QFSSQQNPLLQQFNSQGSSISAQAGLGLGVQAPGMNSVTSASLQQQPNSIHQQSSQQTLM 609

Query: 865  SNGPNDSDISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAGGS 686
            S G  D+D+S   +EE +  Q+  E+S+ ESA SPGL KN++ +++ K  Y++D + G S
Sbjct: 610  SGGQKDADVSHLKVEEPQPPQNLPEESTPESASSPGLGKNLIHEDDLKAPYAIDSSTGVS 669

Query: 685  SPLTEVAQIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGVHD 506
            + LTE AQ+ RDTDL+PGQPLQSSQ S  LGVIGRRS  DLGAIGD++SG+T +SGG+HD
Sbjct: 670  ASLTEPAQVVRDTDLSPGQPLQSSQPSGGLGVIGRRSVSDLGAIGDSLSGATVSSGGMHD 729

Query: 505  QMYNLQMLEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGMES 326
            QMYN+QMLE+A+YKLPQPKDSER +SYIPRHP  TP SYPQ Q PI  NPAFWERL ++S
Sbjct: 730  QMYNMQMLESAFYKLPQPKDSERARSYIPRHPAVTPPSYPQVQAPIVSNPAFWERLSLDS 789

Query: 325  WGTDTLFFSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGTYV 146
            +GTDTLFF+FYYQQNTYQQYLAA+ELK+QSWRYHRKYNTWFQRHEEPKV  DEFEQGTYV
Sbjct: 790  YGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVANDEFEQGTYV 849

Query: 145  YFDFHTANDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            YFDFH ANDDLQ GW QRIKTEFTFEY+YLEDEL+
Sbjct: 850  YFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELI 884


>ref|XP_012092684.1| PREDICTED: general negative regulator of transcription subunit 3
            isoform X1 [Jatropha curcas] gi|643699884|gb|KDP20268.1|
            hypothetical protein JCGZ_06854 [Jatropha curcas]
          Length = 897

 Score =  758 bits (1958), Expect = 0.0
 Identities = 415/757 (54%), Positives = 495/757 (65%), Gaps = 20/757 (2%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EAEIEGL+VKKGK+RPPRL HLE SI RHKAHIMKLELILRLLDND+LSPEQVNDV+DFL
Sbjct: 150  EAEIEGLTVKKGKSRPPRLTHLEASIVRHKAHIMKLELILRLLDNDELSPEQVNDVKDFL 209

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            +DYVERNQ+DFEEFSDVDELY+SLPLDKVESLEDL  IGPP                   
Sbjct: 210  DDYVERNQEDFEEFSDVDELYNSLPLDKVESLEDLVTIGPPGLVKGAPVHTLKTSLASSA 269

Query: 1891 S-------PIXXXXXXXXXXXXXXXXQDNNAEIPPKTPPSKSGVLXXXXXXXXXXXXXXA 1733
            S       P                 QD+N++I  +TPP+KS ++               
Sbjct: 270  SQIPATVTPAHQQATSVQEQPDDTASQDSNSDIVARTPPAKSSMIGSAASTPTVNHATPV 329

Query: 1732 LTINTTAGSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEEI-----RQ 1568
                +       G T+P        V + L+               S KEEE+     R+
Sbjct: 330  SA--SAPPHTVSGVTTPSILPTSTPVRSVLEIAATAIPSSPATLANSAKEEEVAGFPVRR 387

Query: 1567 SSPVLAETXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLAKRGN 1388
             SP L++T                  Q   +IP S    +            SD+AKR  
Sbjct: 388  PSPALSDTGLTRGIGRGSLSS-----QPSPSIPISSA-AVPSNGTLGAVPSVSDIAKRNI 441

Query: 1387 SGLDERTGSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFSPSVV 1208
               D+R GSS + QP+ SPLSNR++LPQ  KS+D     D +NVGE A +GGR+FSPS+V
Sbjct: 442  LSTDDRLGSSAMVQPLTSPLSNRMILPQTGKSNDGTSIVDSSNVGEAAGIGGRVFSPSLV 501

Query: 1207 PGVQWRPPSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQH--HTNLLT------G 1052
            P +QWRP  GSSF N NE GQFR RTEI PDQREKFLQRLQQVQ   H+ LL       G
Sbjct: 502  PSMQWRP--GSSFQNQNEPGQFRARTEIAPDQREKFLQRLQQVQQQGHSTLLGMPPLAGG 559

Query: 1051 GKXXXXXXXXXXXXXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQLPSSIHQQSTQLS 872
                                   SPQ  LGLG+Q+ GLN V SA+LQ P++IHQQ++Q  
Sbjct: 560  NHKQFSAQQNPLLQQFNSQSPSVSPQANLGLGVQASGLNTVTSAALQQPNTIHQQASQQV 619

Query: 871  LMSNGPNDSDISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAG 692
            +MS+G  D+D+S + +EEQ+Q Q+  +DS+ ESA S GL+KN++ ++E KT Y++D + G
Sbjct: 620  VMSSGAKDADVSLSKVEEQQQPQNLPDDSTPESAPSSGLSKNLVNEDELKTAYTMDTSTG 679

Query: 691  GSSPLTEVAQIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGV 512
             S  L E AQ+PRD DL+PGQP+QSSQ S  LGVIGRRS  DLGAIGDN+SGS   SG +
Sbjct: 680  ASGSLAEPAQMPRDIDLSPGQPIQSSQPSTGLGVIGRRSVSDLGAIGDNVSGSAVNSGAM 739

Query: 511  HDQMYNLQMLEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGM 332
            HDQ+YNLQMLEAAY+KLPQPKDSER +SY PRHP ATP SYPQ Q PI  NP FWERL +
Sbjct: 740  HDQIYNLQMLEAAYHKLPQPKDSERARSYTPRHPAATPPSYPQVQAPIVNNPGFWERLTI 799

Query: 331  ESWGTDTLFFSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGT 152
            +S+GTDTLFF+FYYQQNTYQQYLAA+ELK+QSWR+HRKYNTWFQRHEEPKV TDE+EQGT
Sbjct: 800  DSYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRFHRKYNTWFQRHEEPKVATDEYEQGT 859

Query: 151  YVYFDFHTANDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            YVYFDFH ANDDLQ GW QRIKTEFTFEY+YLEDEL+
Sbjct: 860  YVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELI 896


>ref|XP_008240363.1| PREDICTED: CCR4-NOT transcription complex subunit 3 isoform X3
            [Prunus mume]
          Length = 881

 Score =  755 bits (1950), Expect = 0.0
 Identities = 414/751 (55%), Positives = 493/751 (65%), Gaps = 14/751 (1%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EAEIEGLS +KGK RPPRL HLETSI RHKAHIMKLELILRLLDND+LSPEQVNDV+DFL
Sbjct: 150  EAEIEGLSFRKGKGRPPRLTHLETSITRHKAHIMKLELILRLLDNDELSPEQVNDVKDFL 209

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            EDYVERNQ+DF+EFS+VDELY++LPLDKVESLEDL  I PP                   
Sbjct: 210  EDYVERNQEDFDEFSEVDELYNTLPLDKVESLEDLVTIVPPGLVKAAATSTTQQSTSVQE 269

Query: 1891 SPIXXXXXXXXXXXXXXXXQDNNAEIPPKTPPSKSGVLXXXXXXXXXXXXXXALTINTTA 1712
             P+                 D+N +  P+TPP KS  L               L+++ ++
Sbjct: 270  -PVEDTVSQ-----------DSNVDNIPRTPPPKSSALASSPASTPVGGHASPLSVSVSS 317

Query: 1711 GSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEEI-----RQSSPVLAE 1547
             ++ G A S     G ++V    +N              S+KEEE+     R+ SP L++
Sbjct: 318  HNLPG-APSVSAVPGSIAVRGVTENAGASNSSSPVSLSASVKEEELASFPGRRPSPSLSD 376

Query: 1546 TXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLAKRGNSGLDERT 1367
                               Q  ++IP S                 SD+ KR   G DER 
Sbjct: 377  AGLVRGIGRGGLSA-----QIPSSIPLSSSNVAPSNSTLSAAPSVSDVTKRNILGADERI 431

Query: 1366 GSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFSPSVVPGVQWRP 1187
            GSS + QP+ SPLSNR++LPQ  K+SD + P D  N GE A + GR FSPS+V  +QWRP
Sbjct: 432  GSSSVAQPLVSPLSNRLILPQAAKASDGSIPVDSGNAGEAAAIPGRAFSPSMVSSMQWRP 491

Query: 1186 PSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQ--HHTNL----LTGG--KXXXXX 1031
              GSSF N NE G FRGRTEI PDQREKFLQRLQQVQ  H T L    L GG  K     
Sbjct: 492  --GSSFQNQNEAGLFRGRTEIAPDQREKFLQRLQQVQQGHSTILGMPPLAGGNHKQFSGQ 549

Query: 1030 XXXXXXXXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQLP-SSIHQQSTQLSLMSNGP 854
                            S Q GLGLG+Q+PGL  V   +LQ   +SIHQQS Q +LMS+GP
Sbjct: 550  QQNPLLQQFNSPNSSVSSQAGLGLGVQAPGLGTVAPTTLQQQLNSIHQQSNQQALMSSGP 609

Query: 853  NDSDISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAGGSSPLT 674
             ++D+    +E+Q+QQQ+  +DS+ +S    GL KN++ +++ K +Y++D  AG S  LT
Sbjct: 610  KEADVGHPKVEDQQQQQNAPDDSTADSTPVSGLVKNLINEDDLKASYAIDSLAGVSGSLT 669

Query: 673  EVAQIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGVHDQMYN 494
            E AQ+PRD DL+PGQPLQ +Q S++LGVIGRRS  DLGAIGDN+SGST  SGG HDQ+YN
Sbjct: 670  EPAQVPRDIDLSPGQPLQPNQPSSSLGVIGRRSVSDLGAIGDNLSGSTPNSGGTHDQLYN 729

Query: 493  LQMLEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGMESWGTD 314
            LQMLEAAYYKLPQPKDSER +SY PRHP  TP SYPQ Q PI  NPAFWERLG+E +GTD
Sbjct: 730  LQMLEAAYYKLPQPKDSERARSYTPRHPAITPPSYPQAQAPIVNNPAFWERLGLEPYGTD 789

Query: 313  TLFFSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGTYVYFDF 134
            TLFF+FYYQQNTYQQYLAA+ELK+QSWRYHRKYNTWFQRHEEPKV TDE+EQGTYVYFDF
Sbjct: 790  TLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDF 849

Query: 133  HTANDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            H ANDDLQ GW QRIKTEFTFEY+YLEDEL+
Sbjct: 850  HIANDDLQHGWCQRIKTEFTFEYNYLEDELI 880


>ref|XP_002525444.1| conserved hypothetical protein [Ricinus communis]
            gi|223535257|gb|EEF36934.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 889

 Score =  747 bits (1928), Expect = 0.0
 Identities = 412/755 (54%), Positives = 496/755 (65%), Gaps = 18/755 (2%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EAE+EGLSVKKGKTRPPRL HLETSI+RHK+HIMKLELILRLLDND+LSPEQVNDV+DFL
Sbjct: 150  EAEMEGLSVKKGKTRPPRLMHLETSISRHKSHIMKLELILRLLDNDELSPEQVNDVKDFL 209

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDL--PLI--GPPXXXXXXXXXXXXXXX 1904
            +DYVERNQ+DF+EFSDVDELYSSLPLDKVESLE+L  P +  G P               
Sbjct: 210  DDYVERNQEDFDEFSDVDELYSSLPLDKVESLEELVTPALVKGAPVHSLKTSLASSSSQV 269

Query: 1903 XXXXSPIXXXXXXXXXXXXXXXXQDNNAEIPPKTPPSKSGVLXXXXXXXXXXXXXXALTI 1724
                + +                QD+N +I  +TPP+KS  +               +++
Sbjct: 270  LATATSLQQPATNVQEQAEDTASQDSNPDIVARTPPAKSSTIGSSAASTPTVNHSTPISV 329

Query: 1723 NTTAGSIAGGATSP--PNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEE-----IRQS 1565
               A +++G + S   P +S   SV  AL+N               +KEEE     +R+ 
Sbjct: 330  GLPAHTLSGASASSILPGSS---SVRGALENAPANPSSPASLANS-VKEEENAGFPVRRP 385

Query: 1564 SPVLAETXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLAKRGNS 1385
            SP L +                   Q  ++IP S G  +            SD+AKR   
Sbjct: 386  SPALVDPGLARGIGRGAIYS-----QPPSSIPLSSG-AVPSNGAVGAVPTASDIAKRNIL 439

Query: 1384 GLDERTGSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFSPSVVP 1205
              D+R GS G+ QP+ SPLSNR++LPQ  K  D  G  D NNVGE A +GGR+FSP +VP
Sbjct: 440  STDDRLGSGGMVQPLASPLSNRMILPQAGKVGDGTGIVDSNNVGEAAAIGGRVFSP-LVP 498

Query: 1204 GVQWRPPSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQH---HTNL----LTGGK 1046
            G+QWRP  GSSF N NE GQFR RTEITPDQREKFLQR QQVQ    +T L    L GG 
Sbjct: 499  GMQWRP--GSSFQNQNEQGQFRARTEITPDQREKFLQRFQQVQQQGPNTLLGMPPLAGGN 556

Query: 1045 XXXXXXXXXXXXXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQLPSSIHQQSTQLSLM 866
                                   Q  LGLG Q+PG+N + SA+LQ P+++ QQSTQ  +M
Sbjct: 557  HKQFSAQQNSLLQQFNSQSSSVSQATLGLGSQAPGINAITSAALQPPNTLLQQSTQQVVM 616

Query: 865  SNGPNDSDISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAGGS 686
            S    D+DI  + +EEQ+Q Q+  +DS  ESA   GL+KN+M ++E KT Y++D   G S
Sbjct: 617  SK---DADIGLSKVEEQQQPQNLPDDSIAESAPMSGLSKNLMNEDELKTPYTMDTPTGAS 673

Query: 685  SPLTEVAQIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGVHD 506
              L E  Q+PRDTDL+PGQP+QSSQ S  LGVIGRRS  DLGAIGDN+ GS   SG +HD
Sbjct: 674  GTLAEPVQLPRDTDLSPGQPIQSSQPSTGLGVIGRRSVSDLGAIGDNLGGSAVNSGAMHD 733

Query: 505  QMYNLQMLEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGMES 326
            Q+YNLQMLEAAY++LPQPKDSER +SY PRHP ATP SYPQ Q PI  NPAFWERL ++S
Sbjct: 734  QLYNLQMLEAAYHRLPQPKDSERARSYTPRHPTATPPSYPQVQAPIVNNPAFWERLTIDS 793

Query: 325  WGTDTLFFSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGTYV 146
            +GTDTLFF+FYYQQNT+QQYLAA+ELK+QSWRYHRKYNTWFQRHEEPK+ TDE+EQGTYV
Sbjct: 794  YGTDTLFFAFYYQQNTHQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKIATDEYEQGTYV 853

Query: 145  YFDFHTANDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            YFDFH ANDDLQ GW QRIKTEFTFEY+YLEDEL+
Sbjct: 854  YFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELL 888


>ref|XP_012092685.1| PREDICTED: CCR4-NOT transcription complex subunit 3 isoform X2
            [Jatropha curcas]
          Length = 878

 Score =  742 bits (1916), Expect = 0.0
 Identities = 410/756 (54%), Positives = 489/756 (64%), Gaps = 19/756 (2%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EAEIEGL+VKKGK+RPPRL HLE SI RHKAHIMKLELILRLLDND+LSPEQVNDV+DFL
Sbjct: 150  EAEIEGLTVKKGKSRPPRLTHLEASIVRHKAHIMKLELILRLLDNDELSPEQVNDVKDFL 209

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            +DYVERNQ+DFEEFSDVDELY+SLPLDKVESLEDL  IGPP                   
Sbjct: 210  DDYVERNQEDFEEFSDVDELYNSLPLDKVESLEDLVTIGPPGLVKGAPVHTLKTSLASSA 269

Query: 1891 S-------PIXXXXXXXXXXXXXXXXQDNNAEIPPKTPPSKSGVLXXXXXXXXXXXXXXA 1733
            S       P                 QD+N++I  +TPP+KS ++               
Sbjct: 270  SQIPATVTPAHQQATSVQEQPDDTASQDSNSDIVARTPPAKSSMIGSAASTPTVNHATPV 329

Query: 1732 LTINTTAGSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEEI-----RQ 1568
                +       G T+P        V + L+               S KEEE+     R+
Sbjct: 330  SA--SAPPHTVSGVTTPSILPTSTPVRSVLEIAATAIPSSPATLANSAKEEEVAGFPVRR 387

Query: 1567 SSPVLAETXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLAKRGN 1388
             SP L++T                  Q   +IP S    +            SD+AKR  
Sbjct: 388  PSPALSDTGLTRGIGRGSLSS-----QPSPSIPISSA-AVPSNGTLGAVPSVSDIAKRNI 441

Query: 1387 SGLDERTGSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFSPSVV 1208
               D+R GSS + QP+ SPLSNR++LPQ  KS+D     D +NVGE A +GGR+FSPS+V
Sbjct: 442  LSTDDRLGSSAMVQPLTSPLSNRMILPQTGKSNDGTSIVDSSNVGEAAGIGGRVFSPSLV 501

Query: 1207 PGVQWRPPSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQH--HTNLL-----TGG 1049
            P +QWRP  GSSF N NE GQFR RTEI PDQREKFLQRLQQVQ   H+ LL      GG
Sbjct: 502  PSMQWRP--GSSFQNQNEPGQFRARTEIAPDQREKFLQRLQQVQQQGHSTLLGMPPLAGG 559

Query: 1048 KXXXXXXXXXXXXXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQLPSSIHQQSTQLSL 869
                                         L  Q+ GLN V SA+LQ P++IHQQ++Q  +
Sbjct: 560  NHKQFSAQQNP------------------LLQQASGLNTVTSAALQQPNTIHQQASQQVV 601

Query: 868  MSNGPNDSDISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAGG 689
            MS+G  D+D+S + +EEQ+Q Q+  +DS+ ESA S GL+KN++ ++E KT Y++D + G 
Sbjct: 602  MSSGAKDADVSLSKVEEQQQPQNLPDDSTPESAPSSGLSKNLVNEDELKTAYTMDTSTGA 661

Query: 688  SSPLTEVAQIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGVH 509
            S  L E AQ+PRD DL+PGQP+QSSQ S  LGVIGRRS  DLGAIGDN+SGS   SG +H
Sbjct: 662  SGSLAEPAQMPRDIDLSPGQPIQSSQPSTGLGVIGRRSVSDLGAIGDNVSGSAVNSGAMH 721

Query: 508  DQMYNLQMLEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGME 329
            DQ+YNLQMLEAAY+KLPQPKDSER +SY PRHP ATP SYPQ Q PI  NP FWERL ++
Sbjct: 722  DQIYNLQMLEAAYHKLPQPKDSERARSYTPRHPAATPPSYPQVQAPIVNNPGFWERLTID 781

Query: 328  SWGTDTLFFSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGTY 149
            S+GTDTLFF+FYYQQNTYQQYLAA+ELK+QSWR+HRKYNTWFQRHEEPKV TDE+EQGTY
Sbjct: 782  SYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRFHRKYNTWFQRHEEPKVATDEYEQGTY 841

Query: 148  VYFDFHTANDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            VYFDFH ANDDLQ GW QRIKTEFTFEY+YLEDEL+
Sbjct: 842  VYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELI 877


>ref|XP_011464447.1| PREDICTED: CCR4-NOT transcription complex subunit 3 isoform X2
            [Fragaria vesca subsp. vesca]
          Length = 882

 Score =  742 bits (1916), Expect = 0.0
 Identities = 414/755 (54%), Positives = 493/755 (65%), Gaps = 18/755 (2%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EAEIEG+SVKKGK RPPRL HLETSI RHKAHIMKLELILRLLDND+LSPEQVNDV+DFL
Sbjct: 150  EAEIEGVSVKKGKGRPPRLTHLETSITRHKAHIMKLELILRLLDNDELSPEQVNDVKDFL 209

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            EDYVERNQ+DF+EFS+VDELYS+LPLDKVE LEDL ++  P                   
Sbjct: 210  EDYVERNQEDFDEFSEVDELYSTLPLDKVE-LEDLVIV--PPGLVKATVTSSNQPSTPVQ 266

Query: 1891 SPIXXXXXXXXXXXXXXXXQDNNAEIPPKTPPSKSGVLXXXXXXXXXXXXXXALTINTTA 1712
             P+                 ++N +   KTPP KS  L               +++N ++
Sbjct: 267  EPVEDMVSQD----------NSNPDNIAKTPPPKSSALASVASTPTGNQATP-VSLNVSS 315

Query: 1711 GSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEEI-----RQSSPVLAE 1547
             S+ G  T+    +G  +VH   +N              S+KEEE+     R+ SP L++
Sbjct: 316  LSLPG-VTAVSAVAGSNAVHGITENAGAALSSSPGSLSPSVKEEELGTFPGRRPSPSLSD 374

Query: 1546 TXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLAKRGNSGLDERT 1367
            T                  Q  ++IP S    +            +D+AKR   G DER 
Sbjct: 375  TGVVRGVGKGGLAG-----QIPSSIPLSSSNVVPSNTALGAVPSVTDVAKRNILGADERL 429

Query: 1366 GSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFSPSVVPGVQWRP 1187
            G SG+ QP+ SPLS+R++LPQ +KSSD +GP D +N  E   + GR FSPS+V G+QWRP
Sbjct: 430  GGSGVVQPLVSPLSHRMILPQASKSSDGSGPVDSSNTSEATTIPGRAFSPSMVSGMQWRP 489

Query: 1186 PSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQ-------HHTNLLTGG--KXXXX 1034
              GSSFPN NE G FRGRTEI PDQREKFLQRLQQVQ       H    L GG  K    
Sbjct: 490  --GSSFPNQNEAGLFRGRTEIAPDQREKFLQRLQQVQQQGHSTIHSMPALAGGSSKQFSS 547

Query: 1033 XXXXXXXXXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQLP-SSIHQQSTQLS---LM 866
                               Q G+GLG+Q+PGL  V S +LQ   +SIHQQS Q +   LM
Sbjct: 548  QQQNPLLQQFNSQSSSVPSQAGMGLGVQAPGLGTVSSTTLQQQINSIHQQSPQANPQALM 607

Query: 865  SNGPNDSDISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAGGS 686
            S+GP +SD     +E+Q QQQS  +DS+ ESA S G+ KN+M +++ K +Y++D   G S
Sbjct: 608  SSGPKESDAGHPKVEDQ-QQQSIPDDSTSESAPSSGIVKNLMNEDDMKASYAIDSLTGVS 666

Query: 685  SPLTEVAQIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGVHD 506
              LTE +Q+PRD DL+PGQPLQSSQ SA+LGVIGRRS  DLG IGDN+SGS A SG  HD
Sbjct: 667  GSLTESSQVPRDIDLSPGQPLQSSQPSASLGVIGRRSVSDLGTIGDNLSGSIANSGPGHD 726

Query: 505  QMYNLQMLEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGMES 326
            Q+YNLQMLEAA+YKLPQPKDSER +SY PRHP  TP SYPQ Q PI  NPAFWERLG E 
Sbjct: 727  QLYNLQMLEAAFYKLPQPKDSERARSYTPRHPAITPPSYPQVQAPIVNNPAFWERLGSEQ 786

Query: 325  WGTDTLFFSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGTYV 146
            + TDTLFF+FYYQQNTYQQYLAA+ELK+QSWRYHRKYNTWFQRHEEPKV TDE+EQGTYV
Sbjct: 787  YSTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYV 846

Query: 145  YFDFHTANDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            YFDFH ANDDLQ GW QRIKTEFTFEY+YLEDEL+
Sbjct: 847  YFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELI 881


>ref|XP_007030699.1| Transcription regulator NOT2/NOT3/NOT5 family protein [Theobroma
            cacao] gi|508719304|gb|EOY11201.1| Transcription
            regulator NOT2/NOT3/NOT5 family protein [Theobroma cacao]
          Length = 904

 Score =  735 bits (1898), Expect = 0.0
 Identities = 413/756 (54%), Positives = 497/756 (65%), Gaps = 17/756 (2%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EAE+EGL+VKKGKTRPPRL HLE+SI RHKAHIMKLELILRLLDND+LSPEQVNDV+DFL
Sbjct: 150  EAELEGLTVKKGKTRPPRLIHLESSITRHKAHIMKLELILRLLDNDELSPEQVNDVKDFL 209

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            +DYVERNQ+DF+ FS+VD+LY SLPLDKVESLEDL  IGP                    
Sbjct: 210  DDYVERNQEDFDNFSEVDDLYHSLPLDKVESLEDLVTIGPLSKGAPILNLKTSLATSASQ 269

Query: 1891 SPIXXXXXXXXXXXXXXXXQDNNAEIPPKTPPSKSGVLXXXXXXXXXXXXXXALTINTTA 1712
             P                 QD+N+++  +TPPSKS                    +N   
Sbjct: 270  VP----GSSSQEHVEDTASQDSNSDVA-RTPPSKSSATNSSAAATPTGSHATPAPVNLPP 324

Query: 1711 GSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEEI-----RQSSPVLAE 1547
             S++G +T+     G  S    L++              + KEE+I     R+ SP LA+
Sbjct: 325  HSMSGASTASVVLPGSSSARGVLESAGTTNPSSPVNLPNATKEEDITSFPGRRPSPSLAD 384

Query: 1546 TXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLAKRGNSGLDERT 1367
            T                  Q  ++IP   G               SD+AKR   G DER 
Sbjct: 385  TGVRGIGRGGLSS------QPSSSIPLVSGSATSTNGALGVVPSVSDVAKRNILGADERL 438

Query: 1366 GSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFSPSVVPGVQWRP 1187
            G+S +GQ + SPLSNR++LPQ  K++D + P D +N  E A L GR FSPS+V G+QWR 
Sbjct: 439  GNSSMGQSLVSPLSNRMILPQATKANDGSAPVDSSNPSESAGLPGRAFSPSMVSGMQWR- 497

Query: 1186 PSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQH--HTNLLT-----GG--KXXXX 1034
             +GSSF N NE GQFRGRTEI PD REKFLQRLQQVQ   H+NLL+     GG  K    
Sbjct: 498  -AGSSFQNQNELGQFRGRTEIAPDIREKFLQRLQQVQQQGHSNLLSIPSLAGGNHKQFSA 556

Query: 1033 XXXXXXXXXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQL-PSSIHQQSTQLSLMSNG 857
                             S Q G+GLG Q+P LN V SASLQ  P+SIHQQS+Q +L ++ 
Sbjct: 557  QQQNPLMQQFNSQSSALSIQPGMGLGGQAPSLNSVTSASLQQSPNSIHQQSSQQALATSV 616

Query: 856  PNDSDISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAGGSSPL 677
            P D+D+  A +EEQ Q Q+  +DSS E+  + GL KN+M ++E K  Y++D  A  S  L
Sbjct: 617  PKDADVGHAKVEEQ-QPQNLPDDSSSEAVPTSGLAKNLMNEDEMKAPYAIDSPAAVSGSL 675

Query: 676  TEVAQIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGVHDQMY 497
            TE AQ+ RDTDL+PGQPLQ+SQS ++LGVIGRRS  DLGAIGDN+SGST  SGG+HDQ+Y
Sbjct: 676  TEPAQVIRDTDLSPGQPLQTSQSCSSLGVIGRRSVSDLGAIGDNLSGST-NSGGMHDQIY 734

Query: 496  NLQMLEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGMESWGT 317
            NLQMLEAAY+K+PQPKDSER +SY P+HP ATP+SYPQ Q PI  NPAFWERL ++ +GT
Sbjct: 735  NLQMLEAAYFKIPQPKDSERPRSYTPKHPAATPASYPQVQAPIVNNPAFWERLSIDGYGT 794

Query: 316  --DTLFFSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGTYVY 143
              DTLFF+FYYQQNTYQQYLAA+ELK+QSWRYHRKYNTWFQRHEEPK+ TDEFEQGTYVY
Sbjct: 795  GTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKIATDEFEQGTYVY 854

Query: 142  FDFHTANDDLQQGWVQRIKTEFTFEYSYLEDELV*G 35
            FDFH ANDD Q GW QRIKTEFTFEY+YLEDEL+ G
Sbjct: 855  FDFHIANDDHQHGWCQRIKTEFTFEYNYLEDELMAG 890


>gb|KHG12526.1| CCR4-NOT transcription complex subunit 3 [Gossypium arboreum]
          Length = 865

 Score =  716 bits (1849), Expect = 0.0
 Identities = 401/747 (53%), Positives = 486/747 (65%), Gaps = 10/747 (1%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EAEIEGLSVKKGKT+PPRL HLETSI RHKAHIMKLELILRLLDND+LSPEQVNDV+DFL
Sbjct: 150  EAEIEGLSVKKGKTKPPRLTHLETSITRHKAHIMKLELILRLLDNDELSPEQVNDVKDFL 209

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            +DYVERNQ+DF+EFSDVDELY+SL LDKV++LEDL  IGP                    
Sbjct: 210  DDYVERNQEDFDEFSDVDELYNSLALDKVDALEDLVAIGPLSKAAPILGLKPSLASSTSQ 269

Query: 1891 SPIXXXXXXXXXXXXXXXXQDNNAEIPPKTPPSKSGVLXXXXXXXXXXXXXXALTINTTA 1712
             P+                 D+N+++  +TPPSKS  +              A  +N + 
Sbjct: 270  LPVSSPLEHAEDTASQ----DSNSDVA-RTPPSKSCAITSAIATPCGSHPIPA-PLNLSP 323

Query: 1711 GSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEEI-----RQSSPVLAE 1547
             S++G +T P    G  S  + L+N              + KEE+I     R+ SP L +
Sbjct: 324  HSLSGTSTPPIVLPGSSSARSVLENTGTTNPSSPVNLPNATKEEDITSFPGRRPSPSLTD 383

Query: 1546 TXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLAKRGNSGLDERT 1367
            T                  Q  ++IP   G               SD+AKR   G DER 
Sbjct: 384  TGVRGIARGGLSG------QPSSSIPLVSGSMASGNGTLGVVPSVSDMAKRTILGTDERP 437

Query: 1366 GSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFSPSVVPGVQWRP 1187
            G+S + Q + SPLSNR++LPQ  K++D     D +N  E A + GR+FSPS+V G+QWRP
Sbjct: 438  GNSSMVQSLVSPLSNRMMLPQTAKANDGGASVDSSNPSESAGIPGRVFSPSMVSGMQWRP 497

Query: 1186 PSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQH--HTNLLTGGKXXXXXXXXXXX 1013
              GSSF N N+ GQFRGRTEI PD REK+LQRLQQVQ   H+NLL               
Sbjct: 498  --GSSFQNQNDPGQFRGRTEIAPDMREKYLQRLQQVQQQGHSNLLGFNSQSSSLSI---- 551

Query: 1012 XXXXXXXXXXSPQVGLGLGLQSPGLNGVPSASLQLPSS-IHQQSTQLSLMSNGPNDSDIS 836
                        Q GLGLG Q+PG N V +ASLQ   + I QQS+Q +L +N P D DI 
Sbjct: 552  ------------QSGLGLGGQAPGFNSVTAASLQQQQNPIQQQSSQQALATNVPKDGDIG 599

Query: 835  PANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAGGSSPLTEVAQIP 656
             A +EEQ Q ++  +DS+ E+  + GL KN+M ++E KT Y++D  A  S  LTE AQ+ 
Sbjct: 600  NAKVEEQ-QPRNLPDDSNSEAVPTSGLAKNLMNEDEMKTQYAIDSPAAVSGSLTEPAQVI 658

Query: 655  RDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGVHDQMYNLQMLEA 476
            RD DL+PGQPLQS+QSS+ LGVIGRRS  D GAIGDN+S S  T GG+HDQ+YNLQMLEA
Sbjct: 659  RDVDLSPGQPLQSNQSSSGLGVIGRRSVTDFGAIGDNLSVSMNT-GGMHDQLYNLQMLEA 717

Query: 475  AYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGMESWGT--DTLFF 302
            AYYK+PQPKDSER +SY P+HP ATP+SYPQ Q PI  NPAFWER+ ++ +GT  DTLFF
Sbjct: 718  AYYKIPQPKDSERARSYTPKHPAATPASYPQVQAPIVNNPAFWERISLDGYGTGTDTLFF 777

Query: 301  SFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGTYVYFDFHTAN 122
            +FYYQQNTYQQYLAA+ELK+QSWRYHRKYNTWFQRHEEPK+ TDEFEQGTYVYFDFH AN
Sbjct: 778  AFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKIATDEFEQGTYVYFDFHIAN 837

Query: 121  DDLQQGWVQRIKTEFTFEYSYLEDELV 41
            D+ Q GW QRIKTEFTFEY+YLEDEL+
Sbjct: 838  DEHQHGWCQRIKTEFTFEYNYLEDELI 864


>ref|XP_012463119.1| PREDICTED: CCR4-NOT transcription complex subunit 3-like isoform X4
            [Gossypium raimondii]
          Length = 879

 Score =  715 bits (1846), Expect = 0.0
 Identities = 408/755 (54%), Positives = 484/755 (64%), Gaps = 18/755 (2%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EAEIEGLSVKKGKTRPPRL HLETSI RHKAHIMKLELILRLLDND+LSPEQVNDV+DFL
Sbjct: 150  EAEIEGLSVKKGKTRPPRLTHLETSITRHKAHIMKLELILRLLDNDELSPEQVNDVKDFL 209

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            +DYVERNQ+DF+EF DVDELYSSLPLDKVESLEDL  IGP                    
Sbjct: 210  DDYVERNQEDFDEFDDVDELYSSLPLDKVESLEDLVAIGP------------LSKGGPIL 257

Query: 1891 SPIXXXXXXXXXXXXXXXXQDNNAEIPPKTPPSKSGVLXXXXXXXXXXXXXXALTINTTA 1712
                               QD N++I  KTPP KS  +                 +N   
Sbjct: 258  KTSLAASSQLPEHVEDTASQDGNSDIA-KTPPPKSSTINSSAAATPAGSHVTPAPLNLPP 316

Query: 1711 GSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEEI-----RQSSPVLAE 1547
             S++G A+SP       S    L++              + KEE+I     R+ SP LA+
Sbjct: 317  HSLSG-ASSPSVLPDSNSAQGLLESTGTTNPPSPVNLSNATKEEDITNFPGRRPSPSLAD 375

Query: 1546 TXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLAKRGNSGLDERT 1367
                               Q  +TIP   G               SD+AKR   G+DER 
Sbjct: 376  AGVRGIGRGLSG-------QPSSTIPLVSGSVASGNGALGAVPPASDMAKRNILGVDERL 428

Query: 1366 GSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFSPSVVPGVQWRP 1187
            G+S +GQ + SP+SNR++LPQ  K++D + P D +N  E A L GR FSPS+V G+QWRP
Sbjct: 429  GNSSMGQSLTSPISNRMILPQAAKANDGSAPVDSSNPNESAGLPGRAFSPSMVSGMQWRP 488

Query: 1186 PSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQH--HTNLLT------GGKXXXXX 1031
              GSSF N NE  QFRGRTEI PD REKFLQR QQVQ   H+NLL+      GG      
Sbjct: 489  --GSSFQNQNELVQFRGRTEIAPDIREKFLQRFQQVQQQGHSNLLSSMSPLAGGNHNQFS 546

Query: 1030 XXXXXXXXXXXXXXXXSPQV--GLGLGLQSPGLNGVPSASLQL-PSSIHQQSTQLSLMSN 860
                               +  GLG G Q+PGLN V SASLQ  P+SIHQQS+Q +L ++
Sbjct: 547  AQQQSPLMQQFNPQSSCFSIPPGLGHGGQAPGLNSVTSASLQQQPNSIHQQSSQQALATS 606

Query: 859  GPNDSDISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAGGSSP 680
             P D+D+  A +EEQ Q  S  + SS E+  + GL KN+M +++ K  Y++D  A  S  
Sbjct: 607  VPKDADVGVAKVEEQLQ--SLPDGSSSEAIPTSGLAKNLMNEDDLKAPYAIDSPAAVSGS 664

Query: 679  LTEVAQIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGVHDQM 500
            LTE A+  RD DL+PGQPLQ +QSS+ LGVIGRRS  DLGAIGD++SGST  SGG+HDQ+
Sbjct: 665  LTEPARNIRDIDLSPGQPLQYNQSSSGLGVIGRRSVSDLGAIGDSLSGST-NSGGMHDQL 723

Query: 499  YNLQMLEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGMESWG 320
            YN+QMLEAAYYK+PQPKDSER +SY P+HP ATP+SYPQ Q PI  NPAFWER+ M+ +G
Sbjct: 724  YNMQMLEAAYYKIPQPKDSERARSYTPKHPAATPASYPQVQAPIVNNPAFWERISMDGYG 783

Query: 319  T--DTLFFSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGTYV 146
            T  DTLF +FYYQQNTYQQYLAA+ELK+QSWRYHRKYNTWFQRHEEPK+ TDEFEQGTYV
Sbjct: 784  TGTDTLFVAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKIATDEFEQGTYV 843

Query: 145  YFDFHTANDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            YFDFH ANDD Q GW QRIKTEF FEY+YLEDEL+
Sbjct: 844  YFDFHVANDDHQHGWCQRIKTEFIFEYNYLEDELI 878


>ref|XP_012463116.1| PREDICTED: general negative regulator of transcription subunit 3-like
            isoform X2 [Gossypium raimondii]
            gi|763814105|gb|KJB80957.1| hypothetical protein
            B456_013G123000 [Gossypium raimondii]
          Length = 884

 Score =  715 bits (1846), Expect = 0.0
 Identities = 408/755 (54%), Positives = 485/755 (64%), Gaps = 18/755 (2%)
 Frame = -3

Query: 2251 EAEIEGLSVKKGKTRPPRLAHLETSIARHKAHIMKLELILRLLDNDQLSPEQVNDVRDFL 2072
            EAEIEGLSVKKGKTRPPRL HLETSI RHKAHIMKLELILRLLDND+LSPEQVNDV+DFL
Sbjct: 150  EAEIEGLSVKKGKTRPPRLTHLETSITRHKAHIMKLELILRLLDNDELSPEQVNDVKDFL 209

Query: 2071 EDYVERNQDDFEEFSDVDELYSSLPLDKVESLEDLPLIGPPXXXXXXXXXXXXXXXXXXX 1892
            +DYVERNQ+DF+EF DVDELYSSLPLDKVESLEDL  IGP                    
Sbjct: 210  DDYVERNQEDFDEFDDVDELYSSLPLDKVESLEDLVAIGP-------LSKGGPILKTSLA 262

Query: 1891 SPIXXXXXXXXXXXXXXXXQDNNAEIPPKTPPSKSGVLXXXXXXXXXXXXXXALTINTTA 1712
            +                  QD N++I  KTPP KS  +                 +N   
Sbjct: 263  ASSQLPGGSSQEHVEDTASQDGNSDIA-KTPPPKSSTINSSAAATPAGSHVTPAPLNLPP 321

Query: 1711 GSIAGGATSPPNNSGPVSVHAALDNXXXXXXXXXXXXXXSIKEEEI-----RQSSPVLAE 1547
             S++G A+SP       S    L++              + KEE+I     R+ SP LA+
Sbjct: 322  HSLSG-ASSPSVLPDSNSAQGLLESTGTTNPPSPVNLSNATKEEDITNFPGRRPSPSLAD 380

Query: 1546 TXXXXXXXXXXXXXXXXXSQSLNTIPSSPGITIXXXXXXXXXXXXSDLAKRGNSGLDERT 1367
                               Q  +TIP   G               SD+AKR   G+DER 
Sbjct: 381  AGVRGIGRGLSG-------QPSSTIPLVSGSVASGNGALGAVPPASDMAKRNILGVDERL 433

Query: 1366 GSSGIGQPMPSPLSNRVLLPQLNKSSDTAGPTDPNNVGEPAVLGGRIFSPSVVPGVQWRP 1187
            G+S +GQ + SP+SNR++LPQ  K++D + P D +N  E A L GR FSPS+V G+QWRP
Sbjct: 434  GNSSMGQSLTSPISNRMILPQAAKANDGSAPVDSSNPNESAGLPGRAFSPSMVSGMQWRP 493

Query: 1186 PSGSSFPNPNETGQFRGRTEITPDQREKFLQRLQQVQH--HTNLLT------GGKXXXXX 1031
              GSSF N NE  QFRGRTEI PD REKFLQR QQVQ   H+NLL+      GG      
Sbjct: 494  --GSSFQNQNELVQFRGRTEIAPDIREKFLQRFQQVQQQGHSNLLSSMSPLAGGNHNQFS 551

Query: 1030 XXXXXXXXXXXXXXXXSPQV--GLGLGLQSPGLNGVPSASLQL-PSSIHQQSTQLSLMSN 860
                               +  GLG G Q+PGLN V SASLQ  P+SIHQQS+Q +L ++
Sbjct: 552  AQQQSPLMQQFNPQSSCFSIPPGLGHGGQAPGLNSVTSASLQQQPNSIHQQSSQQALATS 611

Query: 859  GPNDSDISPANIEEQRQQQSQYEDSSMESALSPGLNKNVMTDEEPKTTYSVDRTAGGSSP 680
             P D+D+  A +EEQ Q  S  + SS E+  + GL KN+M +++ K  Y++D  A  S  
Sbjct: 612  VPKDADVGVAKVEEQLQ--SLPDGSSSEAIPTSGLAKNLMNEDDLKAPYAIDSPAAVSGS 669

Query: 679  LTEVAQIPRDTDLTPGQPLQSSQSSANLGVIGRRSAPDLGAIGDNISGSTATSGGVHDQM 500
            LTE A+  RD DL+PGQPLQ +QSS+ LGVIGRRS  DLGAIGD++SGST  SGG+HDQ+
Sbjct: 670  LTEPARNIRDIDLSPGQPLQYNQSSSGLGVIGRRSVSDLGAIGDSLSGST-NSGGMHDQL 728

Query: 499  YNLQMLEAAYYKLPQPKDSERTKSYIPRHPVATPSSYPQTQLPIFENPAFWERLGMESWG 320
            YN+QMLEAAYYK+PQPKDSER +SY P+HP ATP+SYPQ Q PI  NPAFWER+ M+ +G
Sbjct: 729  YNMQMLEAAYYKIPQPKDSERARSYTPKHPAATPASYPQVQAPIVNNPAFWERISMDGYG 788

Query: 319  T--DTLFFSFYYQQNTYQQYLAARELKRQSWRYHRKYNTWFQRHEEPKVTTDEFEQGTYV 146
            T  DTLF +FYYQQNTYQQYLAA+ELK+QSWRYHRKYNTWFQRHEEPK+ TDEFEQGTYV
Sbjct: 789  TGTDTLFVAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKIATDEFEQGTYV 848

Query: 145  YFDFHTANDDLQQGWVQRIKTEFTFEYSYLEDELV 41
            YFDFH ANDD Q GW QRIKTEF FEY+YLEDEL+
Sbjct: 849  YFDFHVANDDHQHGWCQRIKTEFIFEYNYLEDELI 883