BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00004455
         (558 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]   221   1e-55
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]   219   5e-55
gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                       216   8e-54
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]   214   2e-53
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]   214   2e-53
emb|CAN83735.1| hypothetical protein VITISV_000740 [Vitis vinifera]   208   1e-51
ref|XP_006471604.1| PREDICTED: leucoanthocyanidin dioxygenase-li...   175   1e-41
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     165   1e-38
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   162   8e-38
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   161   2e-37
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   159   6e-37
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc...   159   1e-36
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   155   1e-35
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     155   1e-35
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   150   3e-34
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc...   150   4e-34
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...   149   1e-33
emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera]   147   3e-33
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl...   145   1e-32
gb|ABF96216.1| retrotransposon protein, putative, Ty1-copia subc...   144   3e-32

>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
          Length = 1544

 Score =  221 bits (564), Expect = 1e-55
 Identities = 114/178 (64%), Positives = 134/178 (75%), Gaps = 21/178 (11%)
 Frame = -2

Query: 557  AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVYQAESL 378
            AVGSLMYAMLCTRPDICFAVG+VSR+Q NPG+EHWTAVKHI+KYLKRT++YMLV+Q+E+L
Sbjct: 1323 AVGSLMYAMLCTRPDICFAVGMVSRFQFNPGREHWTAVKHIIKYLKRTRDYMLVFQSENL 1382

Query: 377  VPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQEKCFGS*TSE--------- 225
            VP+GYTDSDFQSD+D+RKSTSG VF LG  AI WRS+   ++ C    T E         
Sbjct: 1383 VPIGYTDSDFQSDQDSRKSTSGNVFVLGSGAISWRSI---KQTCVADSTMEAKYVAASEA 1439

Query: 224  -----WTWMWYL-------VCKTITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQE 87
                 W   + L       V   ITLYCDNSGAVANSKEPR+H+ AKHIERKYHLI++
Sbjct: 1440 AKEVVWLRNFLLDLGVVPSVQSPITLYCDNSGAVANSKEPRSHKRAKHIERKYHLIRD 1497


>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
          Length = 1285

 Score =  219 bits (559), Expect = 5e-55
 Identities = 114/178 (64%), Positives = 134/178 (75%), Gaps = 21/178 (11%)
 Frame = -2

Query: 557  AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVYQAESL 378
            AVGSLMYAMLCTRPDI FAVG+VSR+QSNPG+EHWTAVKHI+KYLKRT++YMLV+Q+E+L
Sbjct: 1064 AVGSLMYAMLCTRPDIYFAVGMVSRFQSNPGREHWTAVKHIIKYLKRTRDYMLVFQSENL 1123

Query: 377  VPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQEKCFGS*TSE--------- 225
            VP+GYTDSDFQSD+D+RKSTSG VF LGG AI WRS+   ++ C    T E         
Sbjct: 1124 VPIGYTDSDFQSDQDSRKSTSGNVFVLGGGAISWRSI---KQTCVADFTMEAEYVAASEA 1180

Query: 224  -----WTWMWYL-------VCKTITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQE 87
                 W   + L       V   ITLYCDNSGAVANSKEPR+H+ AKHI RKYHLI++
Sbjct: 1181 AKEAVWLRNFLLDLGVVPSVQSPITLYCDNSGAVANSKEPRSHKRAKHIXRKYHLIRD 1238


>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score =  216 bits (549), Expect = 8e-54
 Identities = 112/178 (62%), Positives = 131/178 (73%), Gaps = 21/178 (11%)
 Frame = -2

Query: 557  AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVYQAESL 378
            AVGSLMYAMLCTRPDIC++VGIVSRYQSNPG++HWTAVK+ILKYL+RT+ YMLVY A+ L
Sbjct: 1107 AVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRTRNYMLVYGAKDL 1166

Query: 377  VPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQEKCFGS*TSEWTW------ 216
            +  GYTDSDFQSD+DARKSTSG VFTL G A+VWRS+   ++ C    T E  +      
Sbjct: 1167 ILTGYTDSDFQSDKDARKSTSGSVFTLNGGAVVWRSV---KQTCIADSTMEAEYVAACEA 1223

Query: 215  ----MWYLVCKT-----------ITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQE 87
                +W     T           ITLYCDNSGAVANSKEPR+H+  KHIERKYHLI+E
Sbjct: 1224 AKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIRE 1281


>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
          Length = 633

 Score =  214 bits (546), Expect = 2e-53
 Identities = 110/175 (62%), Positives = 130/175 (74%), Gaps = 18/175 (10%)
 Frame = -2

Query: 557 AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVYQAESL 378
           AVGSLMYAMLCTRPDICFAVG+VSR+QSN G+EHW AVKHI+KYLKRT++YMLV+Q+E+L
Sbjct: 412 AVGSLMYAMLCTRPDICFAVGMVSRFQSNXGREHWXAVKHIIKYLKRTRDYMLVFQSENL 471

Query: 377 VPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL---------*GSQEKCFGS*TSE 225
            P+GYTDSDFQSD+D+RKSTSG VF LGG AI WRS+           ++         E
Sbjct: 472 XPIGYTDSDFQSDQDSRKSTSGNVFXLGGGAISWRSIKQTXVADSTMEAEYVAASEAAKE 531

Query: 224 WTWMWYL---------VCKTITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQE 87
             W+            V   ITLYCDNSGAVANSKEPR+H+ AKHIERKYHLI++
Sbjct: 532 AVWLRNFLLDLGVVPSVQSPITLYCDNSGAVANSKEPRSHKRAKHIERKYHLIRD 586


>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
          Length = 668

 Score =  214 bits (545), Expect = 2e-53
 Identities = 109/178 (61%), Positives = 128/178 (71%), Gaps = 21/178 (11%)
 Frame = -2

Query: 557 AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVYQAESL 378
           AVGSLMYAMLCTRPDICFAVG+VSRYQSNPG +HW AVKHILKYL+RT+ YMLVY    L
Sbjct: 447 AVGSLMYAMLCTRPDICFAVGVVSRYQSNPGLDHWVAVKHILKYLRRTRNYMLVYSGREL 506

Query: 377 VPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQEKCFGS*TSEWTW------ 216
           +P+GYTDSDFQSDRD+RKSTS  VFTLGG AI+WRS+   ++ C    T E  +      
Sbjct: 507 IPIGYTDSDFQSDRDSRKSTSEAVFTLGGGAIIWRSV---KQTCVADSTMEAEYVAACEA 563

Query: 215 ----MWYL-----------VCKTITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQE 87
               +W             + + I LYCDNSGAVAN+KEPR HR  KHIERK+HL++E
Sbjct: 564 AKEAVWLREFLKELEVVPNMHEPIRLYCDNSGAVANAKEPRNHRKGKHIERKFHLVRE 621


>emb|CAN83735.1| hypothetical protein VITISV_000740 [Vitis vinifera]
          Length = 230

 Score =  208 bits (530), Expect = 1e-51
 Identities = 107/178 (60%), Positives = 127/178 (71%), Gaps = 21/178 (11%)
 Frame = -2

Query: 557 AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVYQAESL 378
           AVGSLMYAMLCTRPDICFAVG+VSRYQSNPG + W AVKHILKYL+RT+ YMLVY    L
Sbjct: 9   AVGSLMYAMLCTRPDICFAVGVVSRYQSNPGLDQWVAVKHILKYLRRTRNYMLVYSGREL 68

Query: 377 VPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQEKCFGS*TSEWTW------ 216
           +P+GYTDSDFQSDRD+RKSTS  VFTLGG AI+WRS+   ++ C    T E  +      
Sbjct: 69  IPIGYTDSDFQSDRDSRKSTSRAVFTLGGGAIIWRSV---KQTCVVDSTMEAEYVAACEA 125

Query: 215 ----MWYL-----------VCKTITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQE 87
               +W             + + I LYCDNSGAVAN+KEPR HR  KHIERK+HL+++
Sbjct: 126 AKEAVWLREFLKELEVVPNMHEPIRLYCDNSGAVANAKEPRNHRKGKHIERKFHLVRK 183


>ref|XP_006471604.1| PREDICTED: leucoanthocyanidin dioxygenase-like [Citrus sinensis]
          Length = 629

 Score =  175 bits (444), Expect = 1e-41
 Identities = 92/164 (56%), Positives = 110/164 (67%), Gaps = 21/164 (12%)
 Frame = -2

Query: 557 AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVYQAESL 378
           A+GSLMYAMLCTRPDI FAVGIVSRYQ NPG ++WTA+KHI+KYLKRTK YML+Y  + L
Sbjct: 468 AMGSLMYAMLCTRPDIYFAVGIVSRYQFNPGPQYWTAIKHIIKYLKRTKNYMLMYFGDEL 527

Query: 377 VPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQEKCFGS*TSEWTW------ 216
           +PVGYTDSDF SDRD+ KSTSGYVF LG  AI WRS+   ++ C    T+E  +      
Sbjct: 528 IPVGYTDSDFMSDRDSGKSTSGYVFALGSGAISWRSV---KQSCIADSTTEAEYVVASEA 584

Query: 215 ----MWY-----------LVCKTITLYCDNSGAVANSKEPRAHR 129
               +W             V   + L CDN GAVA SK+PR H+
Sbjct: 585 AKEAVWLRKFLQDLEVVPAVTAPLKLLCDNGGAVAQSKKPRNHK 628


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  165 bits (418), Expect = 1e-38
 Identities = 88/178 (49%), Positives = 117/178 (65%), Gaps = 21/178 (11%)
 Frame = -2

Query: 557  AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVYQA-ES 381
            A+GS+MYAMLCTRPD+ +A+   SRYQS+PG+ HWTAVK+ILKYL+RTK+  LVY   E 
Sbjct: 1097 AIGSIMYAMLCTRPDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLVYGGEED 1156

Query: 380  LVPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQEKCFGS*T---------- 231
            LV  GYTD+ FQ+D+D  +S SG+VF L G A+ W+S    Q+    S T          
Sbjct: 1157 LVVSGYTDASFQTDKDDYRSQSGFVFCLNGGAVSWKS--SKQDTVADSTTEAEYIAASEA 1214

Query: 230  -SEWTWMWYLVCK---------TITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQE 87
              E  W+   V +          ++LYCDNSGA+A +KEPR+H+ +KHI R+YHLI+E
Sbjct: 1215 AKEAVWIKKFVSELGVMTSTTGPMSLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIRE 1272


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
            gi|62701883|gb|AAX92956.1| retrotransposon protein,
            putative, Ty1-copia sub-class [Oryza sativa Japonica
            Group] gi|108864259|gb|ABA92827.2| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  162 bits (411), Expect = 8e-38
 Identities = 87/174 (50%), Positives = 115/174 (66%), Gaps = 17/174 (9%)
 Frame = -2

Query: 557  AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVYQA-ES 381
            A+GS+MYAMLCTRPD+ +A+   SRYQS+PG+ HW AVK+ILKYL+RTK+  L Y   E 
Sbjct: 968  AIGSIMYAMLCTRPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLAYGGQEE 1027

Query: 380  LVPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQEKCFGS*T-------SEW 222
            LV  GYTD+ FQ D+D  +S SG+VF L G A+ W+S    Q+    S T       SE 
Sbjct: 1028 LVVNGYTDASFQIDKDDFRSQSGFVFCLNGGAVSWKS--SKQDIVVDSTTEAEYIAASEA 1085

Query: 221  TWMWYLVCK---------TITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQE 87
             W+   V +         ++ LYCDNSGA+A +KEPR+H+ +KHI R+YHLI+E
Sbjct: 1086 VWIKKFVSQLGVMTSASSSMDLYCDNSGAIAQAKEPRSHQKSKHILRQYHLIRE 1139


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  161 bits (408), Expect = 2e-37
 Identities = 84/178 (47%), Positives = 116/178 (65%), Gaps = 21/178 (11%)
 Frame = -2

Query: 557  AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVYQA-ES 381
            A+GS+MYAM+CTRPD+ +A+ + SRYQ++P + HWTAVK+ILKYL+RTK+  LVY   E 
Sbjct: 677  AIGSIMYAMICTRPDVSYALSVTSRYQADPSEGHWTAVKNILKYLRRTKDVFLVYGGDEE 736

Query: 380  LVPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQEKCFGS*T---------- 231
            LV  GYTD+ FQ+D+D  +S SG+VF L G A+ W+S    QE    S T          
Sbjct: 737  LVVNGYTDASFQTDKDDYRSQSGFVFILNGGAVSWKS--SKQETVADSTTEAEYIAASEA 794

Query: 230  -SEWTWMWYLVCK---------TITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQE 87
              E  W+   + +          + LYCDN+GA+A +KEPR+H+ +KHI R+YHLI+E
Sbjct: 795  AKEGVWIRNFITELGMVPSASSPMDLYCDNNGAIAQAKEPRSHQKSKHILRRYHLIRE 852


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  159 bits (403), Expect = 6e-37
 Identities = 83/178 (46%), Positives = 116/178 (65%), Gaps = 21/178 (11%)
 Frame = -2

Query: 557  AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVYQA-ES 381
            A+GS+MYAM+CTR D+ +A+ + SRYQ++PG+ HWTAVK+ILKYL+RTK+  L+Y   E 
Sbjct: 1093 AIGSIMYAMICTRQDVSYALSVTSRYQADPGECHWTAVKNILKYLRRTKDAFLIYGGDEE 1152

Query: 380  LVPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQEKCFGS*T---------- 231
            LV  GYTD+ FQ+D+D  +S SG+VF L G A+ W+S    QE    S T          
Sbjct: 1153 LVVNGYTDASFQTDKDDYRSQSGFVFILNGGAVSWKS--SKQETVADSTTKAEYIAASEA 1210

Query: 230  -SEWTWMWYLVCK---------TITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQE 87
              E  W+   + +          + LYCDN+GA+A +KEPR+H+ +KHI R+YHLI+E
Sbjct: 1211 AKEGVWIRNFIAELGVVPSASSPMDLYCDNNGAIAQAKEPRSHQKSKHILRRYHLIRE 1268


>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  159 bits (401), Expect = 1e-36
 Identities = 85/178 (47%), Positives = 114/178 (64%), Gaps = 21/178 (11%)
 Frame = -2

Query: 557  AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVYQA-ES 381
            A+GS+MYAMLCTRPD+ +A+   S+YQS+PG+ HW AVK+ILKYL+RTK+  L+Y   E 
Sbjct: 721  AIGSIMYAMLCTRPDVPYALSATSQYQSDPGESHWIAVKNILKYLRRTKDMFLIYGGQEE 780

Query: 380  LVPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQEKCFGS*T---------- 231
            LV   YTD+ FQ+D+D  +S SG+VF L G A+ W+S    Q+    S T          
Sbjct: 781  LVVNNYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKS--SKQDTVADSTTEAEYIAASEA 838

Query: 230  -SEWTWMWYLVCK---------TITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQE 87
              E  W+   V +          + LYCDNSGA+A +KEPR+HR +KHI R+YHLI+E
Sbjct: 839  AKEAAWIKKFVSQLGVMTSASSPMDLYCDNSGAIAQAKEPRSHRKSKHILRRYHLIRE 896


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  155 bits (392), Expect = 1e-35
 Identities = 85/178 (47%), Positives = 114/178 (64%), Gaps = 21/178 (11%)
 Frame = -2

Query: 557  AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVY-QAES 381
            A+GS+MYAMLCTR D+ +A+   SRYQS+ G+ HW AVK+ILKYL+RTK+  LVY + E 
Sbjct: 1046 AIGSIMYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEE 1105

Query: 380  LVPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQEKCFGS*T---------- 231
            LV  GYTD+ FQ+D+D  +S SG+VF L G A+ W+S    Q+    S T          
Sbjct: 1106 LVVNGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKS--SKQDTVADSTTEAEYIAASEA 1163

Query: 230  -SEWTWMWYLVCK---------TITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQE 87
              E  W+   V +          + LYCDNSGA+A +KEPR+H+ +KHI R+YHLI+E
Sbjct: 1164 AKEAVWIKKFVSQLGVMTSASSPMDLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIRE 1221


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  155 bits (392), Expect = 1e-35
 Identities = 85/178 (47%), Positives = 114/178 (64%), Gaps = 21/178 (11%)
 Frame = -2

Query: 557  AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVY-QAES 381
            A+GS+MYAMLCTR D+ +A+   SRYQS+ G+ HW AVK+ILKYL+RTK+  LVY + E 
Sbjct: 959  AIGSIMYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEE 1018

Query: 380  LVPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQEKCFGS*T---------- 231
            LV  GYTD+ FQ+D+D  +S SG+VF L G A+ W+S    Q+    S T          
Sbjct: 1019 LVVNGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKS--SKQDTVADSTTEAEYIAASEA 1076

Query: 230  -SEWTWMWYLVCK---------TITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQE 87
              E  W+   V +          + LYCDNSGA+A +KEPR+H+ +KHI R+YHLI+E
Sbjct: 1077 AKEAVWIKKFVSQLGVMTSASSPMDLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIRE 1134


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  150 bits (380), Expect = 3e-34
 Identities = 80/178 (44%), Positives = 112/178 (62%), Gaps = 21/178 (11%)
 Frame = -2

Query: 557  AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVY-QAES 381
            A+GS+MYAML TRPD+  A+ + SRYQS+PG+ HW  V++I KYL+RTK+  LVY  +E 
Sbjct: 744  AIGSIMYAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEE 803

Query: 380  LVPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQEKCFGS*T---------- 231
            LV  GYTD+ FQ+D+D  +S SG+ F L G A+ W+S    Q     S T          
Sbjct: 804  LVVSGYTDASFQTDKDDFRSQSGFFFCLNGGAVSWKST--KQSTVADSTTEAEYIAASEA 861

Query: 230  -SEWTWMWYLVCK---------TITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQE 87
              E  W+   + +          I LYCDN+GA+A +KEP++H+ +KHI+R+YHLI+E
Sbjct: 862  AKEVVWIRKFITELGVVPSISGPIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIRE 919


>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1745

 Score =  150 bits (379), Expect = 4e-34
 Identities = 77/158 (48%), Positives = 102/158 (64%), Gaps = 1/158 (0%)
 Frame = -2

Query: 557  AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVYQA-ES 381
            A+GS+MYAMLCTR D+ +A+   SRYQS+PG+ HW AVK+ILKYL+RTK+  LVY   E 
Sbjct: 1561 AIGSIMYAMLCTRIDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLVYGGQEE 1620

Query: 380  LVPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQEKCFGS*TSEWTWMWYLV 201
            LV  GY D+ FQ+D+D  +  SG+VF L G A+ W+S+  S                   
Sbjct: 1621 LVVNGYIDASFQTDKDDFRLQSGFVFCLNGRAVSWKSVMTS------------------A 1662

Query: 200  CKTITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQE 87
               + LYCDNSGA+  +KE R+H+ +KHI R+YHLI E
Sbjct: 1663 SSPMNLYCDNSGAIVQAKEHRSHQKSKHILRRYHLIHE 1700


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1050

 Score =  149 bits (375), Expect = 1e-33
 Identities = 83/178 (46%), Positives = 112/178 (62%), Gaps = 21/178 (11%)
 Frame = -2

Query: 557  AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVYQA-ES 381
            A+GS+MYAMLCT PD+ +A+   SRYQS+PG+ HW AVK+ILKYL+RTK+  LVY   E 
Sbjct: 831  AIGSIMYAMLCTHPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLVYGGQEE 890

Query: 380  LVPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQEKCFGS*T---------- 231
            LV  GYTD+ FQ+D+D  +S SG+VF L G A+ W+S    Q+    S T          
Sbjct: 891  LVVKGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKS--SKQDTVVDSITEAEYIAASEA 948

Query: 230  -SEWTWMWYLVCK---------TITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQE 87
              E  W+   V +          + LYCDNSGA+A +KEPR+H+ + +I  +YHLI+E
Sbjct: 949  AKEAVWIKKFVSQLGVMTSASSPMDLYCDNSGAIAQAKEPRSHQKS-NILWRYHLIRE 1005


>emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera]
          Length = 745

 Score =  147 bits (372), Expect = 3e-33
 Identities = 81/178 (45%), Positives = 110/178 (61%), Gaps = 20/178 (11%)
 Frame = -2

Query: 557  AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVYQAES- 381
            AVGSLMYA +CTRPDI FAVG++ RYQSNPG++HW A K +++YL+ TK+Y L+Y+  S 
Sbjct: 487  AVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGKDHWKAAKKVMRYLQGTKDYKLMYRRTSN 546

Query: 380  LVPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQE----------KCFGS*T 231
            L  VGY+DSDF    D+RKSTSGY+F L G AI WRS+  +             CF + T
Sbjct: 547  LEVVGYSDSDFAGCVDSRKSTSGYIFILAGGAISWRSVKQTMTATSTMEAEFISCFET-T 605

Query: 230  SEWTWMWYL---------VCKTITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQER 84
            S   W+            + +++++YCDNS  V  +K  +    +KHI+ KY  I ER
Sbjct: 606  SHGVWLTSFIFGLRVMDSISRSLSIYCDNSVVVFMAKNNKTGSRSKHIDIKYLAISER 663


>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
          Length = 1321

 Score =  145 bits (366), Expect = 1e-32
 Identities = 81/186 (43%), Positives = 115/186 (61%), Gaps = 20/186 (10%)
 Frame = -2

Query: 554  VGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVY-QAESL 378
            VGSLMYA +CTRPDI FAVG++ RYQSNPG +HW A K +L+YL+ TK+YML+Y Q ++L
Sbjct: 1103 VGSLMYAQVCTRPDIAFAVGMLGRYQSNPGIDHWRAAKKVLRYLQGTKDYMLMYRQTDNL 1162

Query: 377  VPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRSL*GSQE----------KCFGS*TS 228
              +GY+DSDF    D+R+STSGY+F + G AI W S+  S             CF + TS
Sbjct: 1163 DAIGYSDSDFAGCVDSRRSTSGYIFMMAGGAISWGSVKQSLAATSTMEAEFVSCFEA-TS 1221

Query: 227  EWTWMWYL---------VCKTITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQERRCC 75
               W+            + + + ++CDNS AV  +K  ++   +KHI+ KY  I+ER   
Sbjct: 1222 HGVWLKSFISGLKIIDTISRPLRIFCDNSAAVFMAKNNKSGSRSKHIDIKYLAIRER--V 1279

Query: 74   RDKESI 57
            +DK+ +
Sbjct: 1280 KDKKVV 1285


>gb|ABF96216.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 904

 Score =  144 bits (363), Expect = 3e-32
 Identities = 79/178 (44%), Positives = 109/178 (61%), Gaps = 20/178 (11%)
 Frame = -2

Query: 557  AVGSLMYAMLCTRPDICFAVGIVSRYQSNPGQEHWTAVKHILKYLKRTKEYMLVY-QAES 381
            AVGSLMYA +CTRPD+ F  G++SR+QSNPG +HW AVK +L+Y + TK+YML Y ++E 
Sbjct: 685  AVGSLMYAEVCTRPDLAFVTGMLSRFQSNPGLDHWKAVKKVLRYFQGTKDYMLTYKKSEE 744

Query: 380  LVPVGYTDSDFQSDRDARKSTSGYVFTLGG*AIVWRS----------L*GSQEKCFGS*T 231
            L  +GY+D+DF    D +KSTSGYVFTL   AI W+S          +      C+ + T
Sbjct: 745  LEVLGYSDADFAGCVDTKKSTSGYVFTLANGAISWKSSKQTLTTSSTMQAEFLACYEA-T 803

Query: 230  SEWTWMWYL---------VCKTITLYCDNSGAVANSKEPRAHRTAKHIERKYHLIQER 84
             +  W+  L         + K ITLY DN  AV  S   ++   AKHI+ KYH++++R
Sbjct: 804  GQAVWLKNLIPGLRVVDSISKPITLYYDNKAAVFYSSNNKSSGAAKHIDIKYHVVKDR 861