BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00001891
         (2964 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010265282.1| PREDICTED: transcription initiation factor T...   581   0.0  
ref|XP_010265283.1| PREDICTED: transcription initiation factor T...   581   0.0  
ref|XP_010663540.1| PREDICTED: transcription initiation factor T...   551   0.0  
ref|XP_010663541.1| PREDICTED: transcription initiation factor T...   551   0.0  
ref|XP_010663542.1| PREDICTED: transcription initiation factor T...   551   0.0  
ref|XP_006485746.1| PREDICTED: transcription initiation factor T...   544   0.0  
ref|XP_006440912.1| hypothetical protein CICLE_v10018514mg [Citr...   540   0.0  
ref|XP_007036424.1| TBP-associated factor 2 [Theobroma cacao] gi...   531   0.0  
ref|XP_012462841.1| PREDICTED: transcription initiation factor T...   501   0.0  
ref|XP_012462917.1| PREDICTED: transcription initiation factor T...   501   0.0  
ref|XP_012462994.1| PREDICTED: transcription initiation factor T...   501   0.0  
ref|XP_008456406.1| PREDICTED: transcription initiation factor T...   509   0.0  
ref|XP_004137463.1| PREDICTED: transcription initiation factor T...   505   0.0  
ref|XP_010932628.1| PREDICTED: transcription initiation factor T...   479   0.0  
gb|KJB07814.1| hypothetical protein B456_001G045800 [Gossypium r...   479   0.0  
gb|KJB07812.1| hypothetical protein B456_001G045800 [Gossypium r...   479   0.0  
emb|CDO98474.1| unnamed protein product [Coffea canephora]            464   0.0  
ref|XP_010037343.1| PREDICTED: transcription initiation factor T...   459   0.0  
ref|XP_010037344.1| PREDICTED: transcription initiation factor T...   459   0.0  
ref|XP_009391393.1| PREDICTED: transcription initiation factor T...   468   0.0  

>ref|XP_010265282.1| PREDICTED: transcription initiation factor TFIID subunit 2 isoform X1
            [Nelumbo nucifera]
          Length = 1350

 Score =  581 bits (1498), Expect(2) = 0.0
 Identities = 345/614 (56%), Positives = 404/614 (65%), Gaps = 20/614 (3%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHAIAMVRA+DK SPREAVEFVLQLLKYNDNNGNPYSDVYWL+A+V+S+GELEFG Q
Sbjct: 761  EAIPHAIAMVRAADKKSPREAVEFVLQLLKYNDNNGNPYSDVYWLSALVESVGELEFGTQ 820

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
            SI FLSSLLKRIDRLLQFDRLMPSYNGILTISCIR+LTQIALKLS+S+PL+ V +LIKP+
Sbjct: 821  SISFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIALKLSSSIPLDGVFQLIKPF 880

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R   T W+VR+EASRALLD+EF   GIDAAL +F +Y+EEE S RGQVKLAVHAMRLCQI
Sbjct: 881  RSSETQWQVRIEASRALLDIEFQSKGIDAALSLFVKYLEEEVSYRGQVKLAVHAMRLCQI 940

Query: 1563 KCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPRTVQL 1384
            KCGS  E  IK+ T       LESRKAF+NVFLRHHLFCILQ+L GRPPTLYGVPR  Q 
Sbjct: 941  KCGSKCEDVIKNPTLVALLRFLESRKAFNNVFLRHHLFCILQILGGRPPTLYGVPRVQQQ 1000

Query: 1383 -TGEAETCSEQIKASAYFKLKMS-----------IAPEPIVDAPNPVPDALPTPEAPREA 1240
              G  ETCSEQ   +A+ K++ S           +  EP VD P P  D L  PEA REA
Sbjct: 1001 PIGNGETCSEQKNFAAFVKMRTSKPQEHPVDVPKLPQEPPVDTPKPSADGLLIPEATREA 1060

Query: 1239 DAVSNGSERR-SVVKIRVRQSAASSRADEAENVFVGTSRGIQDETERGGSSSMSVDAPVR 1063
            D  SNG+ERR  VVKIRV+QSAASSR +EA+N  +  S+G Q+ETERG SSSMSVDAP R
Sbjct: 1061 DRTSNGNERRMPVVKIRVKQSAASSRVEEADNT-IDRSQGGQNETERGASSSMSVDAPPR 1119

Query: 1062 IPDEPMNVDCQILEEVNSCHDHVSHVTASIGSAKIAN-IEDEARKELQCTADSSKVDCEQ 886
            + +E +    Q LEEVNS HD  S +TASIGSAK+ N  +DEA KELQCTADS K D   
Sbjct: 1120 MMNELVCASNQNLEEVNSFHDRGSRMTASIGSAKLPNDDDDEAGKELQCTADSRKSDALP 1179

Query: 885  LHEDHSPATILNGNCVDPDAQKFASLRTISTGTYQCDAPPLATTGNPDLL------XXXX 724
              ED S   I+ G+  + + QK+ASL+ +S G    D   L + G P +           
Sbjct: 1180 QVEDRSSPGIVRGDNGEGEVQKYASLQLLSVGKNDQDGAAL-SMGEPHVREKEKEEKKKK 1238

Query: 723  XXXXXXXXXXXXXXXXXEHRNDPEYXXXXXXXXXXXXXXXXXXXQSEVAKVPPIEFPNTN 544
                              HR+DPEY                                   
Sbjct: 1239 KKDKEKKRKREDKEGHKGHRDDPEYLERKRLK------------------------KEKK 1274

Query: 543  VEPRVRSVLQSEDSNAPFLERQIPNEESRFKSASLALKPNPNERSGSKLVIKTVESKGDP 364
             + +    LQ  ++ A   E Q   +E R KSA++ LK  P E SGSKLVIK+VE+K + 
Sbjct: 1275 QKKKEMERLQKAEAKASSSELQGKRDEPRVKSATVELK--PIEPSGSKLVIKSVETKEEA 1332

Query: 363  SEGSSVHKFRIKIK 322
            SEG SVHK RIK+K
Sbjct: 1333 SEGGSVHKLRIKLK 1346



 Score =  491 bits (1263), Expect(2) = 0.0
 Identities = 238/287 (82%), Positives = 257/287 (89%), Gaps = 2/287 (0%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFRHL+NKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKN+IELAVLRGCTA
Sbjct: 477  LSTKEFRHLANKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNMIELAVLRGCTA 536

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
            T DS     +GNP+ + REGDVGWPGMMSIRV+ELDGMYDHPILPM+GE  QL+EIQCHS
Sbjct: 537  TPDSVALVSNGNPDSEAREGDVGWPGMMSIRVHELDGMYDHPILPMAGETWQLLEIQCHS 596

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXDL--RANAESPLLWLRADPEMEYLTEIHFNQPI 2429
            KLAA+R PKPKKGS+P            +  R++AESPLLWLRADPEMEYL EIHF+QP+
Sbjct: 597  KLAARRIPKPKKGSKPDGSDDNADAAPTMDMRSSAESPLLWLRADPEMEYLAEIHFSQPV 656

Query: 2428 QMWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAH 2249
            QMWINQLEKDKDVVAQA AIATLEALPQLSF+VVNAL NFLSDSKAFWRVRIEAAFALAH
Sbjct: 657  QMWINQLEKDKDVVAQAHAIATLEALPQLSFSVVNALNNFLSDSKAFWRVRIEAAFALAH 716

Query: 2248 TASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVM 2108
            TASE+TDWAGLLHLVKFYKSRRFD N+GLPRPNDFHDFPEYFVLE +
Sbjct: 717  TASEETDWAGLLHLVKFYKSRRFDPNIGLPRPNDFHDFPEYFVLEAI 763


>ref|XP_010265283.1| PREDICTED: transcription initiation factor TFIID subunit 2 isoform X2
            [Nelumbo nucifera]
          Length = 1177

 Score =  581 bits (1498), Expect(2) = 0.0
 Identities = 345/614 (56%), Positives = 404/614 (65%), Gaps = 20/614 (3%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHAIAMVRA+DK SPREAVEFVLQLLKYNDNNGNPYSDVYWL+A+V+S+GELEFG Q
Sbjct: 588  EAIPHAIAMVRAADKKSPREAVEFVLQLLKYNDNNGNPYSDVYWLSALVESVGELEFGTQ 647

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
            SI FLSSLLKRIDRLLQFDRLMPSYNGILTISCIR+LTQIALKLS+S+PL+ V +LIKP+
Sbjct: 648  SISFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIALKLSSSIPLDGVFQLIKPF 707

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R   T W+VR+EASRALLD+EF   GIDAAL +F +Y+EEE S RGQVKLAVHAMRLCQI
Sbjct: 708  RSSETQWQVRIEASRALLDIEFQSKGIDAALSLFVKYLEEEVSYRGQVKLAVHAMRLCQI 767

Query: 1563 KCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPRTVQL 1384
            KCGS  E  IK+ T       LESRKAF+NVFLRHHLFCILQ+L GRPPTLYGVPR  Q 
Sbjct: 768  KCGSKCEDVIKNPTLVALLRFLESRKAFNNVFLRHHLFCILQILGGRPPTLYGVPRVQQQ 827

Query: 1383 -TGEAETCSEQIKASAYFKLKMS-----------IAPEPIVDAPNPVPDALPTPEAPREA 1240
              G  ETCSEQ   +A+ K++ S           +  EP VD P P  D L  PEA REA
Sbjct: 828  PIGNGETCSEQKNFAAFVKMRTSKPQEHPVDVPKLPQEPPVDTPKPSADGLLIPEATREA 887

Query: 1239 DAVSNGSERR-SVVKIRVRQSAASSRADEAENVFVGTSRGIQDETERGGSSSMSVDAPVR 1063
            D  SNG+ERR  VVKIRV+QSAASSR +EA+N  +  S+G Q+ETERG SSSMSVDAP R
Sbjct: 888  DRTSNGNERRMPVVKIRVKQSAASSRVEEADNT-IDRSQGGQNETERGASSSMSVDAPPR 946

Query: 1062 IPDEPMNVDCQILEEVNSCHDHVSHVTASIGSAKIAN-IEDEARKELQCTADSSKVDCEQ 886
            + +E +    Q LEEVNS HD  S +TASIGSAK+ N  +DEA KELQCTADS K D   
Sbjct: 947  MMNELVCASNQNLEEVNSFHDRGSRMTASIGSAKLPNDDDDEAGKELQCTADSRKSDALP 1006

Query: 885  LHEDHSPATILNGNCVDPDAQKFASLRTISTGTYQCDAPPLATTGNPDLL------XXXX 724
              ED S   I+ G+  + + QK+ASL+ +S G    D   L + G P +           
Sbjct: 1007 QVEDRSSPGIVRGDNGEGEVQKYASLQLLSVGKNDQDGAAL-SMGEPHVREKEKEEKKKK 1065

Query: 723  XXXXXXXXXXXXXXXXXEHRNDPEYXXXXXXXXXXXXXXXXXXXQSEVAKVPPIEFPNTN 544
                              HR+DPEY                                   
Sbjct: 1066 KKDKEKKRKREDKEGHKGHRDDPEYLERKRLK------------------------KEKK 1101

Query: 543  VEPRVRSVLQSEDSNAPFLERQIPNEESRFKSASLALKPNPNERSGSKLVIKTVESKGDP 364
             + +    LQ  ++ A   E Q   +E R KSA++ LK  P E SGSKLVIK+VE+K + 
Sbjct: 1102 QKKKEMERLQKAEAKASSSELQGKRDEPRVKSATVELK--PIEPSGSKLVIKSVETKEEA 1159

Query: 363  SEGSSVHKFRIKIK 322
            SEG SVHK RIK+K
Sbjct: 1160 SEGGSVHKLRIKLK 1173



 Score =  491 bits (1263), Expect(2) = 0.0
 Identities = 238/287 (82%), Positives = 257/287 (89%), Gaps = 2/287 (0%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFRHL+NKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKN+IELAVLRGCTA
Sbjct: 304  LSTKEFRHLANKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNMIELAVLRGCTA 363

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
            T DS     +GNP+ + REGDVGWPGMMSIRV+ELDGMYDHPILPM+GE  QL+EIQCHS
Sbjct: 364  TPDSVALVSNGNPDSEAREGDVGWPGMMSIRVHELDGMYDHPILPMAGETWQLLEIQCHS 423

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXDL--RANAESPLLWLRADPEMEYLTEIHFNQPI 2429
            KLAA+R PKPKKGS+P            +  R++AESPLLWLRADPEMEYL EIHF+QP+
Sbjct: 424  KLAARRIPKPKKGSKPDGSDDNADAAPTMDMRSSAESPLLWLRADPEMEYLAEIHFSQPV 483

Query: 2428 QMWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAH 2249
            QMWINQLEKDKDVVAQA AIATLEALPQLSF+VVNAL NFLSDSKAFWRVRIEAAFALAH
Sbjct: 484  QMWINQLEKDKDVVAQAHAIATLEALPQLSFSVVNALNNFLSDSKAFWRVRIEAAFALAH 543

Query: 2248 TASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVM 2108
            TASE+TDWAGLLHLVKFYKSRRFD N+GLPRPNDFHDFPEYFVLE +
Sbjct: 544  TASEETDWAGLLHLVKFYKSRRFDPNIGLPRPNDFHDFPEYFVLEAI 590


>ref|XP_010663540.1| PREDICTED: transcription initiation factor TFIID subunit 2 isoform X1
            [Vitis vinifera]
          Length = 1360

 Score =  551 bits (1421), Expect(2) = 0.0
 Identities = 337/614 (54%), Positives = 397/614 (64%), Gaps = 17/614 (2%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHAIAMVRA+DK SPREAVEFVLQLLKYNDNNGNPYSDV+WLAA+VQS+GELEFGQQ
Sbjct: 764  EAIPHAIAMVRAADKKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQ 823

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
            SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIR+LTQI LKLS  +PL+RV EL+KP+
Sbjct: 824  SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIGLKLSGFIPLDRVIELVKPF 883

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R+   +W+VR+EASRALL LEFH  GIDAAL +F +Y+EEE S+RGQVKL VHAMRLCQI
Sbjct: 884  RDFQAIWQVRIEASRALLGLEFHFKGIDAALSLFIKYVEEEPSIRGQVKLGVHAMRLCQI 943

Query: 1563 KCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPR-TVQ 1387
            K GS+ + DIKSST       LESR AF+NVFLRHHLFCIL++L+GR PTLYGVPR  + 
Sbjct: 944  KGGSESDNDIKSSTLVALLRLLESRIAFNNVFLRHHLFCILRILAGRLPTLYGVPRDQIP 1003

Query: 1386 LTGEAETCSEQIKASAYFKLKMSIAPEPIVDAPNPVPDALPTPEAPREADAVSNGSERR- 1210
                AE CSEQ K      +K + + EP VD PN   D L  PEA READ VSN  ER+ 
Sbjct: 1004 QMDPAEICSEQ-KNGFITIVKETKSLEPPVDTPNVSHDGLALPEASREADTVSNSHERKM 1062

Query: 1209 SVVKIRVRQSAASSRADEAENVFVGTSRGIQDETERGGSSSMSVDAPVRIPDEPMNVDCQ 1030
             VVKIRVRQSAASSRA+EA+N  V  S+G  +E +RGGSSS+SVDAP R   E +++  Q
Sbjct: 1063 PVVKIRVRQSAASSRAEEADNPTVDKSQGGHNEIDRGGSSSISVDAPQRNFTEAVSISNQ 1122

Query: 1029 ILEEVNSCHDHVSHVTASIGSAKIANIEDEARKELQCTADSSKVDCEQLHEDHSP----- 865
             LEEVNSCHD  S +TASIGSAK+A+  DE  KELQCTADS K+       D  P     
Sbjct: 1123 NLEEVNSCHDRGSQMTASIGSAKLASDGDEVGKELQCTADSGKISVLP-PSDEGPLFSGI 1181

Query: 864  ----ATILNGNCVDPDAQKFASLRTISTGTYQCDAPPLATTGNPDLLXXXXXXXXXXXXX 697
                   +  N VD DAQK+ASL+T+S   ++ +   +A                     
Sbjct: 1182 QDIQGGSIQDNIVDVDAQKYASLQTLSVMRHEVEGGTVAAV----------KPQSHGKAK 1231

Query: 696  XXXXXXXXEHRNDPEY-XXXXXXXXXXXXXXXXXXXQSEVAKVPPIEFP-----NTNVEP 535
                      R DPEY                     S  AK    E           + 
Sbjct: 1232 EKKEKEKKRKREDPEYLERKRLKKEKKQKEKEMAQLLSGEAKQKEKEMSELLSGEAKQKE 1291

Query: 534  RVRSVLQSEDSNAPFLERQIPNEESRFKSASLALKPNPNERSGSKLVIKTVESKGDPSEG 355
            +  + L S D+ A  +E  +   ES  K A++  K   +E S SK+V   VE+    SEG
Sbjct: 1292 KEMTELLSGDAKASSVELGVKKVESGIKLATVQYK--ASESSVSKIVTTKVEA----SEG 1345

Query: 354  SSVHKFRIKIKNRS 313
            SS  KFRIKIKNRS
Sbjct: 1346 SSAPKFRIKIKNRS 1359



 Score =  473 bits (1218), Expect(2) = 0.0
 Identities = 229/286 (80%), Positives = 251/286 (87%), Gaps = 1/286 (0%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFRH +NKVGNLERPFLKEFFPRWVGSCGCPVLR GLSYNKRKNL+ELAVLRGCTA
Sbjct: 481  LSTKEFRHFANKVGNLERPFLKEFFPRWVGSCGCPVLRAGLSYNKRKNLVELAVLRGCTA 540

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
              D+ T   +GN + + RE D+GWPGMMSIRV+ELDGMYDHPILPM+GE  QL+EIQCHS
Sbjct: 541  APDTNTMVLNGNIDSENREVDIGWPGMMSIRVHELDGMYDHPILPMAGETWQLLEIQCHS 600

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXD-LRANAESPLLWLRADPEMEYLTEIHFNQPIQ 2426
            KLAA+RF KPKKGS+P             +R+N ESPLLWLR DPE+EYL EIHFNQP Q
Sbjct: 601  KLAARRFQKPKKGSKPDGSDDNGDVPAVDMRSNTESPLLWLRVDPELEYLAEIHFNQPAQ 660

Query: 2425 MWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAHT 2246
            MWINQLE+DKDVVAQAQAIATLEALPQLSF+VVNAL NFLSDSKAFWRVRIEAAFALA+T
Sbjct: 661  MWINQLERDKDVVAQAQAIATLEALPQLSFSVVNALNNFLSDSKAFWRVRIEAAFALANT 720

Query: 2245 ASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVM 2108
            ASE+TDWAGLLHLVKFYKSRRFD N+GLP+PNDFHDFPEYFVLE +
Sbjct: 721  ASEETDWAGLLHLVKFYKSRRFDANIGLPKPNDFHDFPEYFVLEAI 766


>ref|XP_010663541.1| PREDICTED: transcription initiation factor TFIID subunit 2 isoform X2
            [Vitis vinifera]
          Length = 1359

 Score =  551 bits (1421), Expect(2) = 0.0
 Identities = 337/614 (54%), Positives = 397/614 (64%), Gaps = 17/614 (2%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHAIAMVRA+DK SPREAVEFVLQLLKYNDNNGNPYSDV+WLAA+VQS+GELEFGQQ
Sbjct: 763  EAIPHAIAMVRAADKKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQ 822

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
            SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIR+LTQI LKLS  +PL+RV EL+KP+
Sbjct: 823  SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIGLKLSGFIPLDRVIELVKPF 882

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R+   +W+VR+EASRALL LEFH  GIDAAL +F +Y+EEE S+RGQVKL VHAMRLCQI
Sbjct: 883  RDFQAIWQVRIEASRALLGLEFHFKGIDAALSLFIKYVEEEPSIRGQVKLGVHAMRLCQI 942

Query: 1563 KCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPR-TVQ 1387
            K GS+ + DIKSST       LESR AF+NVFLRHHLFCIL++L+GR PTLYGVPR  + 
Sbjct: 943  KGGSESDNDIKSSTLVALLRLLESRIAFNNVFLRHHLFCILRILAGRLPTLYGVPRDQIP 1002

Query: 1386 LTGEAETCSEQIKASAYFKLKMSIAPEPIVDAPNPVPDALPTPEAPREADAVSNGSERR- 1210
                AE CSEQ K      +K + + EP VD PN   D L  PEA READ VSN  ER+ 
Sbjct: 1003 QMDPAEICSEQ-KNGFITIVKETKSLEPPVDTPNVSHDGLALPEASREADTVSNSHERKM 1061

Query: 1209 SVVKIRVRQSAASSRADEAENVFVGTSRGIQDETERGGSSSMSVDAPVRIPDEPMNVDCQ 1030
             VVKIRVRQSAASSRA+EA+N  V  S+G  +E +RGGSSS+SVDAP R   E +++  Q
Sbjct: 1062 PVVKIRVRQSAASSRAEEADNPTVDKSQGGHNEIDRGGSSSISVDAPQRNFTEAVSISNQ 1121

Query: 1029 ILEEVNSCHDHVSHVTASIGSAKIANIEDEARKELQCTADSSKVDCEQLHEDHSP----- 865
             LEEVNSCHD  S +TASIGSAK+A+  DE  KELQCTADS K+       D  P     
Sbjct: 1122 NLEEVNSCHDRGSQMTASIGSAKLASDGDEVGKELQCTADSGKISVLP-PSDEGPLFSGI 1180

Query: 864  ----ATILNGNCVDPDAQKFASLRTISTGTYQCDAPPLATTGNPDLLXXXXXXXXXXXXX 697
                   +  N VD DAQK+ASL+T+S   ++ +   +A                     
Sbjct: 1181 QDIQGGSIQDNIVDVDAQKYASLQTLSVMRHEVEGGTVAAV----------KPQSHGKAK 1230

Query: 696  XXXXXXXXEHRNDPEY-XXXXXXXXXXXXXXXXXXXQSEVAKVPPIEFP-----NTNVEP 535
                      R DPEY                     S  AK    E           + 
Sbjct: 1231 EKKEKEKKRKREDPEYLERKRLKKEKKQKEKEMAQLLSGEAKQKEKEMSELLSGEAKQKE 1290

Query: 534  RVRSVLQSEDSNAPFLERQIPNEESRFKSASLALKPNPNERSGSKLVIKTVESKGDPSEG 355
            +  + L S D+ A  +E  +   ES  K A++  K   +E S SK+V   VE+    SEG
Sbjct: 1291 KEMTELLSGDAKASSVELGVKKVESGIKLATVQYK--ASESSVSKIVTTKVEA----SEG 1344

Query: 354  SSVHKFRIKIKNRS 313
            SS  KFRIKIKNRS
Sbjct: 1345 SSAPKFRIKIKNRS 1358



 Score =  473 bits (1218), Expect(2) = 0.0
 Identities = 229/286 (80%), Positives = 251/286 (87%), Gaps = 1/286 (0%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFRH +NKVGNLERPFLKEFFPRWVGSCGCPVLR GLSYNKRKNL+ELAVLRGCTA
Sbjct: 480  LSTKEFRHFANKVGNLERPFLKEFFPRWVGSCGCPVLRAGLSYNKRKNLVELAVLRGCTA 539

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
              D+ T   +GN + + RE D+GWPGMMSIRV+ELDGMYDHPILPM+GE  QL+EIQCHS
Sbjct: 540  APDTNTMVLNGNIDSENREVDIGWPGMMSIRVHELDGMYDHPILPMAGETWQLLEIQCHS 599

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXD-LRANAESPLLWLRADPEMEYLTEIHFNQPIQ 2426
            KLAA+RF KPKKGS+P             +R+N ESPLLWLR DPE+EYL EIHFNQP Q
Sbjct: 600  KLAARRFQKPKKGSKPDGSDDNGDVPAVDMRSNTESPLLWLRVDPELEYLAEIHFNQPAQ 659

Query: 2425 MWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAHT 2246
            MWINQLE+DKDVVAQAQAIATLEALPQLSF+VVNAL NFLSDSKAFWRVRIEAAFALA+T
Sbjct: 660  MWINQLERDKDVVAQAQAIATLEALPQLSFSVVNALNNFLSDSKAFWRVRIEAAFALANT 719

Query: 2245 ASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVM 2108
            ASE+TDWAGLLHLVKFYKSRRFD N+GLP+PNDFHDFPEYFVLE +
Sbjct: 720  ASEETDWAGLLHLVKFYKSRRFDANIGLPKPNDFHDFPEYFVLEAI 765


>ref|XP_010663542.1| PREDICTED: transcription initiation factor TFIID subunit 2 isoform X3
            [Vitis vinifera]
          Length = 1167

 Score =  551 bits (1421), Expect(2) = 0.0
 Identities = 337/614 (54%), Positives = 397/614 (64%), Gaps = 17/614 (2%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHAIAMVRA+DK SPREAVEFVLQLLKYNDNNGNPYSDV+WLAA+VQS+GELEFGQQ
Sbjct: 571  EAIPHAIAMVRAADKKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQ 630

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
            SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIR+LTQI LKLS  +PL+RV EL+KP+
Sbjct: 631  SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIGLKLSGFIPLDRVIELVKPF 690

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R+   +W+VR+EASRALL LEFH  GIDAAL +F +Y+EEE S+RGQVKL VHAMRLCQI
Sbjct: 691  RDFQAIWQVRIEASRALLGLEFHFKGIDAALSLFIKYVEEEPSIRGQVKLGVHAMRLCQI 750

Query: 1563 KCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPR-TVQ 1387
            K GS+ + DIKSST       LESR AF+NVFLRHHLFCIL++L+GR PTLYGVPR  + 
Sbjct: 751  KGGSESDNDIKSSTLVALLRLLESRIAFNNVFLRHHLFCILRILAGRLPTLYGVPRDQIP 810

Query: 1386 LTGEAETCSEQIKASAYFKLKMSIAPEPIVDAPNPVPDALPTPEAPREADAVSNGSERR- 1210
                AE CSEQ K      +K + + EP VD PN   D L  PEA READ VSN  ER+ 
Sbjct: 811  QMDPAEICSEQ-KNGFITIVKETKSLEPPVDTPNVSHDGLALPEASREADTVSNSHERKM 869

Query: 1209 SVVKIRVRQSAASSRADEAENVFVGTSRGIQDETERGGSSSMSVDAPVRIPDEPMNVDCQ 1030
             VVKIRVRQSAASSRA+EA+N  V  S+G  +E +RGGSSS+SVDAP R   E +++  Q
Sbjct: 870  PVVKIRVRQSAASSRAEEADNPTVDKSQGGHNEIDRGGSSSISVDAPQRNFTEAVSISNQ 929

Query: 1029 ILEEVNSCHDHVSHVTASIGSAKIANIEDEARKELQCTADSSKVDCEQLHEDHSP----- 865
             LEEVNSCHD  S +TASIGSAK+A+  DE  KELQCTADS K+       D  P     
Sbjct: 930  NLEEVNSCHDRGSQMTASIGSAKLASDGDEVGKELQCTADSGKISVLP-PSDEGPLFSGI 988

Query: 864  ----ATILNGNCVDPDAQKFASLRTISTGTYQCDAPPLATTGNPDLLXXXXXXXXXXXXX 697
                   +  N VD DAQK+ASL+T+S   ++ +   +A                     
Sbjct: 989  QDIQGGSIQDNIVDVDAQKYASLQTLSVMRHEVEGGTVAAV----------KPQSHGKAK 1038

Query: 696  XXXXXXXXEHRNDPEY-XXXXXXXXXXXXXXXXXXXQSEVAKVPPIEFP-----NTNVEP 535
                      R DPEY                     S  AK    E           + 
Sbjct: 1039 EKKEKEKKRKREDPEYLERKRLKKEKKQKEKEMAQLLSGEAKQKEKEMSELLSGEAKQKE 1098

Query: 534  RVRSVLQSEDSNAPFLERQIPNEESRFKSASLALKPNPNERSGSKLVIKTVESKGDPSEG 355
            +  + L S D+ A  +E  +   ES  K A++  K   +E S SK+V   VE+    SEG
Sbjct: 1099 KEMTELLSGDAKASSVELGVKKVESGIKLATVQYK--ASESSVSKIVTTKVEA----SEG 1152

Query: 354  SSVHKFRIKIKNRS 313
            SS  KFRIKIKNRS
Sbjct: 1153 SSAPKFRIKIKNRS 1166



 Score =  473 bits (1218), Expect(2) = 0.0
 Identities = 229/286 (80%), Positives = 251/286 (87%), Gaps = 1/286 (0%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFRH +NKVGNLERPFLKEFFPRWVGSCGCPVLR GLSYNKRKNL+ELAVLRGCTA
Sbjct: 288  LSTKEFRHFANKVGNLERPFLKEFFPRWVGSCGCPVLRAGLSYNKRKNLVELAVLRGCTA 347

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
              D+ T   +GN + + RE D+GWPGMMSIRV+ELDGMYDHPILPM+GE  QL+EIQCHS
Sbjct: 348  APDTNTMVLNGNIDSENREVDIGWPGMMSIRVHELDGMYDHPILPMAGETWQLLEIQCHS 407

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXD-LRANAESPLLWLRADPEMEYLTEIHFNQPIQ 2426
            KLAA+RF KPKKGS+P             +R+N ESPLLWLR DPE+EYL EIHFNQP Q
Sbjct: 408  KLAARRFQKPKKGSKPDGSDDNGDVPAVDMRSNTESPLLWLRVDPELEYLAEIHFNQPAQ 467

Query: 2425 MWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAHT 2246
            MWINQLE+DKDVVAQAQAIATLEALPQLSF+VVNAL NFLSDSKAFWRVRIEAAFALA+T
Sbjct: 468  MWINQLERDKDVVAQAQAIATLEALPQLSFSVVNALNNFLSDSKAFWRVRIEAAFALANT 527

Query: 2245 ASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVM 2108
            ASE+TDWAGLLHLVKFYKSRRFD N+GLP+PNDFHDFPEYFVLE +
Sbjct: 528  ASEETDWAGLLHLVKFYKSRRFDANIGLPKPNDFHDFPEYFVLEAI 573


>ref|XP_006485746.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            isoform X1 [Citrus sinensis]
          Length = 1354

 Score =  544 bits (1402), Expect(2) = 0.0
 Identities = 330/642 (51%), Positives = 402/642 (62%), Gaps = 43/642 (6%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHA+AMVRA+D  SPREAVEFVLQLLKYNDNNGNPYSDV+WLAA+VQS+GELEFGQQ
Sbjct: 762  EAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQ 821

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
            SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIR+LTQIALKLS  + L++V +LIKP+
Sbjct: 822  SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIALKLSGFISLDQVVKLIKPF 881

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R+  T+W+VRVEASRALLDLEFHCNGID+AL +F + +EEE SLRGQVKL +HAMR+CQI
Sbjct: 882  RDFNTIWQVRVEASRALLDLEFHCNGIDSALSLFIKSVEEEPSLRGQVKLGIHAMRICQI 941

Query: 1563 KCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPR-TVQ 1387
            K GSD   ++ + T       LESR AF+NVFLRHHLF ILQ+L+GR PTLYGVPR  + 
Sbjct: 942  KGGSDSNHEVDTVTLVALLNLLESRIAFNNVFLRHHLFGILQILAGRAPTLYGVPRDKLL 1001

Query: 1386 LTGEAETCSEQIKASAYFKLKMSIAPEPIVDAPN------PVPDA--------------- 1270
            L G+ ET SEQ    A F  +M  A EP VD PN       V DA               
Sbjct: 1002 LLGDGET-SEQKNVFASFVTEMRRA-EPPVDVPNLSQDNLAVRDASKEVDCVANGHAENI 1059

Query: 1269 LPTPEAPREADAVSNGSERR---------------------SVVKIRVRQSAASSRADEA 1153
            L  PEAP++AD +SN  ER+                      VVKIRV+QS A+SRADEA
Sbjct: 1060 LAVPEAPKDADVISNSHERKMAVPEASKEADTVSNSYERKLPVVKIRVKQSTATSRADEA 1119

Query: 1152 ENVFVGTSRGIQDETERGGSSSMSVDAPVRIPDEPMNVDCQILEEVNSCHDHVSHVTASI 973
            +N  +  S+G   E +RG SSS+SVDAP R   E ++     +EEVNSCHDH S +TASI
Sbjct: 1120 DNRTIEKSQGGNHENDRGASSSVSVDAPQRNSAEAVSFSNHNIEEVNSCHDHGSRMTASI 1179

Query: 972  GSAKIANIEDEARKELQCTADSSKVDCEQLHEDHSPATILNGNCVDPDAQKFASLRTIST 793
            GSAK+ +  D   KELQCTADSSKV      +D S  +I+  N VD DAQKFASL+T+S 
Sbjct: 1180 GSAKLPSEGDNFGKELQCTADSSKVSMHLQPDDPSSPSIIQDNNVDADAQKFASLQTLSV 1239

Query: 792  GTYQCDAPPLATTGNPDLLXXXXXXXXXXXXXXXXXXXXXEHRNDPEYXXXXXXXXXXXX 613
              +  +        + +                        +R DP+Y            
Sbjct: 1240 ARHDLNGKEKKEKKDRE---------------------KKRNREDPDY------LEKKRL 1272

Query: 612  XXXXXXXQSEVAKVPPIEFPNTNVEPRVRSVLQSEDSNAPFLERQIPNEESRFKSASLAL 433
                   + E+AK                  L  +++ AP +E     EES  K+A+  L
Sbjct: 1273 KKEKKRKEKELAK------------------LLGDEAKAPSVELAAKKEESNIKNATAQL 1314

Query: 432  KPNPNERSGSKLVIKTVESKGDPSEGSSVHKFRIKIKNRSLN 307
            K  P E SGSK+ I  V +K +PSEG++  KFRIKIK+R+ N
Sbjct: 1315 K--PFEPSGSKVTISKVAAKPEPSEGTTAPKFRIKIKSRTQN 1354



 Score =  454 bits (1168), Expect(2) = 0.0
 Identities = 221/287 (77%), Positives = 244/287 (85%), Gaps = 2/287 (0%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFRH +NKVGNLERPFLKEFFPRWVG+CGCPVLRMG SYNKRKN++ELAVLR CTA
Sbjct: 478  LSTKEFRHFANKVGNLERPFLKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTA 537

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
              DS T   S N + + R+GD+GWPGMMSIRV+ELDGMYDHPILPM+G+  QL+EIQCHS
Sbjct: 538  KPDSRTPVLSSNTDSENRDGDIGWPGMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHS 597

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXDL--RANAESPLLWLRADPEMEYLTEIHFNQPI 2429
            KLAA+R  KPKKGS+P            L  R++ ESPL W+RADPEMEYL EIHFNQP+
Sbjct: 598  KLAARRALKPKKGSKPDGCDDNGDAVAVLDMRSSMESPLSWIRADPEMEYLAEIHFNQPV 657

Query: 2428 QMWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAH 2249
            QMWINQLEKD DVVAQAQAIA LEALP LSF VVN L NFLSDSKAFWRVRIEAA+ALA+
Sbjct: 658  QMWINQLEKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALAN 717

Query: 2248 TASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVM 2108
            TASE+TDWAGLLHLVKFYKSRRFDEN+GLPRPNDF DF EYFVLE +
Sbjct: 718  TASEETDWAGLLHLVKFYKSRRFDENIGLPRPNDFRDFSEYFVLEAI 764


>ref|XP_006440912.1| hypothetical protein CICLE_v10018514mg [Citrus clementina]
            gi|557543174|gb|ESR54152.1| hypothetical protein
            CICLE_v10018514mg [Citrus clementina]
          Length = 1354

 Score =  540 bits (1391), Expect(2) = 0.0
 Identities = 328/642 (51%), Positives = 401/642 (62%), Gaps = 43/642 (6%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHA+AMVRA+D  SPREAVEFVLQLLKYNDNNGNPYSDV+WLAA+VQS+GELEFGQQ
Sbjct: 762  EAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQ 821

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
            SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIR+LTQIALKLS  + L++V +LIKP+
Sbjct: 822  SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIALKLSGFISLDQVVKLIKPF 881

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R+  T+W+VRVEASRALLDLEFHCNGID+AL +F + +EEE SLRGQVKL +HAMR+CQI
Sbjct: 882  RDFNTIWQVRVEASRALLDLEFHCNGIDSALSLFIKSVEEEPSLRGQVKLGIHAMRICQI 941

Query: 1563 KCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPR-TVQ 1387
            K GSD   ++ + T       LESR +F+NVFLRHHLF ILQ+L+GR PTLYGVPR  + 
Sbjct: 942  KGGSDSNHEVDTVTLVALLNLLESRISFNNVFLRHHLFGILQILAGRAPTLYGVPRDKLL 1001

Query: 1386 LTGEAETCSEQIKASAYFKLKMSIAPEPIVDAPN-------------------------- 1285
            L G+ ET SEQ    A F  +M  A EP +D PN                          
Sbjct: 1002 LLGDGET-SEQKNVFASFVTEMRRA-EPPMDVPNLSQDNLAVRDASKEVDCVANGHAENI 1059

Query: 1284 -PVPDA--------------LPTPEAPREADAVSNGSERR-SVVKIRVRQSAASSRADEA 1153
              VP+A              +  PEA +EA+ VSN  ER+  VVKIRV+QS A+SRADEA
Sbjct: 1060 LAVPEASKDADVISNSHERKMAVPEASKEAETVSNSYERKLPVVKIRVKQSTATSRADEA 1119

Query: 1152 ENVFVGTSRGIQDETERGGSSSMSVDAPVRIPDEPMNVDCQILEEVNSCHDHVSHVTASI 973
            +N  +  S+G   E +RG SSS+SVDAP R   E ++     +EEVNSCHDH S +TASI
Sbjct: 1120 DNRTIEKSQGGNHENDRGASSSVSVDAPQRNSAEAVSFSNHNIEEVNSCHDHGSRMTASI 1179

Query: 972  GSAKIANIEDEARKELQCTADSSKVDCEQLHEDHSPATILNGNCVDPDAQKFASLRTIST 793
            GSAK+ +  D   KELQCTADSSKV      +D S  +I+  N VD DAQKFASL+T+S 
Sbjct: 1180 GSAKLPSEGDNFGKELQCTADSSKVSMHLQPDDPSSPSIMQDNNVDADAQKFASLQTLSV 1239

Query: 792  GTYQCDAPPLATTGNPDLLXXXXXXXXXXXXXXXXXXXXXEHRNDPEYXXXXXXXXXXXX 613
              +  +        + +                        +R DP+Y            
Sbjct: 1240 ARHDLNGKEKKEKKDRE---------------------KKRNREDPDY------LEKKRL 1272

Query: 612  XXXXXXXQSEVAKVPPIEFPNTNVEPRVRSVLQSEDSNAPFLERQIPNEESRFKSASLAL 433
                   + E+AK                  L  +++ AP +E     EES  K+A+  L
Sbjct: 1273 KKEKKRKEKELAK------------------LLGDEAKAPSVELAAKKEESNIKNATAQL 1314

Query: 432  KPNPNERSGSKLVIKTVESKGDPSEGSSVHKFRIKIKNRSLN 307
            K  P E SGSK+ I  V +K +PSEGS   KFRIKIK+R+ N
Sbjct: 1315 K--PFEPSGSKVTISKVAAKPEPSEGSPAPKFRIKIKSRTQN 1354



 Score =  456 bits (1172), Expect(2) = 0.0
 Identities = 221/287 (77%), Positives = 244/287 (85%), Gaps = 2/287 (0%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFRH +NKVGNLERPFLKEFFPRWVG+CGCPVLRMG SYNKRKN++ELAVLR CT 
Sbjct: 478  LSTKEFRHFANKVGNLERPFLKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTV 537

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
              DS T   S N + + R+GD+GWPGMMSIRV+ELDGMYDHPILPM+G+  QL+EIQCHS
Sbjct: 538  KPDSRTPVLSSNTDSENRDGDIGWPGMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHS 597

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXDL--RANAESPLLWLRADPEMEYLTEIHFNQPI 2429
            KLAA+R  KPKKGS+P            L  R++ ESPL W+RADPEMEYL EIHFNQP+
Sbjct: 598  KLAARRALKPKKGSKPDGCDDNGDAVAGLDMRSSMESPLSWIRADPEMEYLAEIHFNQPV 657

Query: 2428 QMWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAH 2249
            QMWINQLEKD DVVAQAQAIA LEALP LSF VVN L NFLSDSKAFWRVRIEAA+ALA+
Sbjct: 658  QMWINQLEKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALAN 717

Query: 2248 TASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVM 2108
            TASE+TDWAGLLHLVKFYKSRRFDEN+GLPRPNDFHDF EYFVLE +
Sbjct: 718  TASEETDWAGLLHLVKFYKSRRFDENIGLPRPNDFHDFSEYFVLEAI 764


>ref|XP_007036424.1| TBP-associated factor 2 [Theobroma cacao] gi|508773669|gb|EOY20925.1|
            TBP-associated factor 2 [Theobroma cacao]
          Length = 1349

 Score =  531 bits (1369), Expect(2) = 0.0
 Identities = 318/611 (52%), Positives = 395/611 (64%), Gaps = 10/611 (1%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIP AIAMVRA+DK SPREAVEFVLQLLKYNDNNGNPYSDV+WLAA+VQS+GELEFGQQ
Sbjct: 759  EAIPRAIAMVRAADKKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQ 818

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
            SI  LSSLLKRIDRLLQFDRLMPSYNGILTISCIR+L QIALKLS  + L+ V ELIKP+
Sbjct: 819  SIFLLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLAQIALKLSGFIHLDHVCELIKPF 878

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R+  T+W+VR+EASRALLDLEF+CNGI+AAL +F +YIEEE SLRGQVKL VHAMRLCQI
Sbjct: 879  RDFKTIWQVRIEASRALLDLEFNCNGINAALLLFIKYIEEEPSLRGQVKLGVHAMRLCQI 938

Query: 1563 KCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPR-TVQ 1387
            + GS    DIKS+T       LESR AF+NV LRH++F ILQVL+GR PTLYGVP+  V+
Sbjct: 939  RGGSVSNEDIKSTTLVALLQLLESRIAFNNVSLRHYMFSILQVLAGRTPTLYGVPKDKVR 998

Query: 1386 LTGEAETCSEQIKASAYFKLKMSIAP-EPIVDAPNPVPDALPTPEAPREADAVSNGSERR 1210
               + E C+EQ   + +  L   I P EP    PN + D L  PEA +  D VSN  ER+
Sbjct: 999  RMADVEICNEQ--KNHFAALVAEIKPAEPPAANPNLLHDNLAIPEASKGVDTVSNSHERK 1056

Query: 1209 -SVVKIRVRQSAASSRADEAENVFVGTSRGIQDETERGGSSSMSVDAPVRIPDEPMNVDC 1033
             SVVKIRV+QS  +S+A+E ++  V  S+G   + +RG +SS+SVDAP R   E +++  
Sbjct: 1057 TSVVKIRVKQSGTTSKAEEGDDATVERSQGRHPDADRGATSSVSVDAPQRNSAEAVSISN 1116

Query: 1032 QILEEVNSCHDHVSHVTASIGSAKIANIEDEARKELQCTADSSKVDCEQLHEDHSPATIL 853
            Q +EEVNS HDH S +TASIGSAKIA+  D   KELQCTADSS V      ++ S  +I+
Sbjct: 1117 QNIEEVNSFHDHGSRITASIGSAKIASEGDNFGKELQCTADSSNVAACPRPDNPSSPSII 1176

Query: 852  NGNCVDPDAQKFASLRTISTGTYQCDAPPLATTGNPD-----LLXXXXXXXXXXXXXXXX 688
              N +D + QKFASL+T+S    + D   L T  +P+                       
Sbjct: 1177 QDNYIDAEGQKFASLQTLSVS--RQDGGSLGTVDSPNRGKEKKKKKKDKEKKKDKEKKRK 1234

Query: 687  XXXXXEHRNDPEYXXXXXXXXXXXXXXXXXXXQSEVAKVPPIEFPNTNVEPRVRSVLQSE 508
                  HR+D EY                       AK P              + L+ +
Sbjct: 1235 REDLKGHRDDLEYLEKKRLKKERKHKEKEMAKLLSEAKTPS------------TTELRGK 1282

Query: 507  DSNAPFLERQIP--NEESRFKSASLALKPNPNERSGSKLVIKTVESKGDPSEGSSVHKFR 334
                  L +++P   EE   KSA++ LKP+    +  K+VI   E++ +P+EG+S  KFR
Sbjct: 1283 KEETTSLTKELPGKKEELVAKSATVPLKPS----APPKVVITKSETRTEPTEGTSAPKFR 1338

Query: 333  IKIKNRSLNKS 301
            IKIKN+SLNKS
Sbjct: 1339 IKIKNKSLNKS 1349



 Score =  440 bits (1131), Expect(2) = 0.0
 Identities = 211/288 (73%), Positives = 245/288 (85%), Gaps = 1/288 (0%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFRH +NK+GNLERPFLKEFFPRWVGS GCPVLRMG SYNKRKN+IELAVLR CTA
Sbjct: 476  LSTKEFRHFANKIGNLERPFLKEFFPRWVGSHGCPVLRMGFSYNKRKNIIELAVLRECTA 535

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
            T DS  S P+ NP+ + R+GD+GWPG+M++RVYELDGM DHP LPMSG+  QL+EI CHS
Sbjct: 536  TLDSSVSVPNANPDSENRDGDIGWPGVMTVRVYELDGMSDHPDLPMSGDAWQLLEIACHS 595

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXD-LRANAESPLLWLRADPEMEYLTEIHFNQPIQ 2426
            KLAA+R+ KPKKGS+P             +R++ +SPLLW+RADPEMEYL EIHFNQP+Q
Sbjct: 596  KLAARRYQKPKKGSKPDGSDDNGDMPSLDVRSSVDSPLLWIRADPEMEYLAEIHFNQPVQ 655

Query: 2425 MWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAHT 2246
            MWINQLEKD+DVVAQAQAIA LE+LP+ S +VVNAL NFL+DSKAFWRVRIEAAFALA T
Sbjct: 656  MWINQLEKDEDVVAQAQAIAALESLPEFSPSVVNALNNFLTDSKAFWRVRIEAAFALAST 715

Query: 2245 ASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVMQR 2102
            +SE+TD AGL HLV+FYKSRRFD ++GLP+PNDF DFPEYFVLE + R
Sbjct: 716  SSEETDLAGLQHLVRFYKSRRFDADIGLPKPNDFRDFPEYFVLEAIPR 763


>ref|XP_012462841.1| PREDICTED: transcription initiation factor TFIID subunit 2 isoform X1
            [Gossypium raimondii] gi|763740316|gb|KJB07815.1|
            hypothetical protein B456_001G045800 [Gossypium
            raimondii]
          Length = 1344

 Score =  501 bits (1291), Expect(2) = 0.0
 Identities = 304/616 (49%), Positives = 383/616 (62%), Gaps = 15/616 (2%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHA+A +RA+D+ SPREAVEF+LQLLKYNDNN NPYSDV+WLAA+VQS+GELEFGQQ
Sbjct: 757  EAIPHAVATIRAADRKSPREAVEFILQLLKYNDNNENPYSDVFWLAALVQSVGELEFGQQ 816

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
            SI FLSSLLKRIDRLLQFDRLMPSYNGILTISCIR+L QIALKLS  + L+ V ELIKP+
Sbjct: 817  SIYFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLAQIALKLSGFIHLDHVFELIKPF 876

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R+  T+W+VR+EASRALLDLE HCNGI+AAL +F +YIEEE SLRGQVKL VHAMRLCQI
Sbjct: 877  RDSKTIWQVRIEASRALLDLEHHCNGINAALLLFIKYIEEEPSLRGQVKLGVHAMRLCQI 936

Query: 1563 KCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPR-TVQ 1387
            + GS    DIK++T       LESR AF+NVFLRH+LFCILQVL+GR PTLYGVP+  + 
Sbjct: 937  QGGSVSSEDIKATTLVALLHLLESRIAFNNVFLRHYLFCILQVLAGRSPTLYGVPKEKLP 996

Query: 1386 LTGEAETCSEQIKASAYFKLKMSIAPEPIVDAPNP-----VPDALPTPEAPREADAVSNG 1222
              G  E C+EQ K +    +     P+P     NP       D L  PEA +E D VSN 
Sbjct: 997  CMGNVEICNEQ-KNNFGAPVNEIRPPQPQPPMGNPSHSNHSHDNLAIPEASKEVDTVSNS 1055

Query: 1221 SERR-SVVKIRVRQSAASSRADEAENVFVGTSRGIQ-------DETERGGSSSMSVDAPV 1066
             +R+ +VVKIRV+QSA SS+A+EA+N     S G +        + +RG +SS+SVDAP 
Sbjct: 1056 HDRKTAVVKIRVKQSATSSKAEEADNGTAERSEGGERSEGRRNHDADRGATSSVSVDAPQ 1115

Query: 1065 RIPDEPMNVDCQILEEVNSCHDHVSHVTASIGSAKIANIEDEARKELQCTADSSKVDCEQ 886
            R   E +++  Q +EEVNS HDH S +TASIGSAKIA+  D   KELQCTADS       
Sbjct: 1116 RNSAEAVSISNQNIEEVNSFHDHGSRITASIGSAKIASEGDNFGKELQCTADSGNASVHH 1175

Query: 885  LHEDHSPATILNGNCVDPDAQKFASLRTISTGTYQCDAPPLATTGNPDLLXXXXXXXXXX 706
              +D S  +I+  + +D +A+K+ASL+T+S    + D PP                    
Sbjct: 1176 QPDDPSSPSIIQDSYIDAEAKKYASLQTLSIS--RDDGPPFQEKEKEK--KKKSKKKKKD 1231

Query: 705  XXXXXXXXXXXEHRNDPEYXXXXXXXXXXXXXXXXXXXQSEVAKVPPIEFPNTNVEPRVR 526
                         RNDPEY                     +  K    E      E +  
Sbjct: 1232 KEKKRKGEEHKGERNDPEY--------------LEKKRLKKEKKYKEKEMARILGEVKAA 1277

Query: 525  S-VLQSEDSNAPFLERQIPNEESRFKSASLALKPNPNERSGSKLVIKTVESKGDPSEGSS 349
            S  L+S+      L +   N++            N N     K+VI  +E++ +P++ +S
Sbjct: 1278 SGELKSKKEETTSLTQMGGNKQE---------ADNMNSSEPPKVVISKLETRTEPTQPTS 1328

Query: 348  VHKFRIKIKNRSLNKS 301
              KFRIKIK++ L+KS
Sbjct: 1329 APKFRIKIKSKPLSKS 1344



 Score =  431 bits (1109), Expect(2) = 0.0
 Identities = 207/292 (70%), Positives = 243/292 (83%), Gaps = 1/292 (0%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFRH +NK+GNLERPFLKEFFPRWVG  GCPVLRMG SYNKRKN+IELAVLR CTA
Sbjct: 474  LSTKEFRHFANKIGNLERPFLKEFFPRWVGLYGCPVLRMGFSYNKRKNIIELAVLRECTA 533

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
            T DS  S  + NP+ + R+GD+GWPG+M++RVYELDGM DHP LPM+G+  QL+EI CHS
Sbjct: 534  TIDSSVSVLNANPDSENRDGDIGWPGVMTVRVYELDGMSDHPDLPMAGDAWQLLEIACHS 593

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXD-LRANAESPLLWLRADPEMEYLTEIHFNQPIQ 2426
            KLAA+R+ KPKKGS+P             +R++ +SPLLW+RADPEMEYL EIHFNQP+Q
Sbjct: 594  KLAARRYQKPKKGSKPDGSDDNGDLPTVDMRSSVDSPLLWIRADPEMEYLAEIHFNQPVQ 653

Query: 2425 MWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAHT 2246
            MWINQLEKD+DVVAQAQAI  LE+LP+LSF+V+ AL NFL+DSKAFWRVRIEAA ALA T
Sbjct: 654  MWINQLEKDEDVVAQAQAITALESLPELSFSVLKALNNFLTDSKAFWRVRIEAALALAST 713

Query: 2245 ASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVMQRGHST 2090
            +SE+TD AGL HLVKFYKSRRFD ++GLP+PNDF DFPEYFVLE +    +T
Sbjct: 714  SSEETDMAGLQHLVKFYKSRRFDTDIGLPKPNDFSDFPEYFVLEAIPHAVAT 765


>ref|XP_012462917.1| PREDICTED: transcription initiation factor TFIID subunit 2 isoform X2
            [Gossypium raimondii] gi|763740317|gb|KJB07816.1|
            hypothetical protein B456_001G045800 [Gossypium
            raimondii]
          Length = 1341

 Score =  501 bits (1291), Expect(2) = 0.0
 Identities = 304/616 (49%), Positives = 383/616 (62%), Gaps = 15/616 (2%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHA+A +RA+D+ SPREAVEF+LQLLKYNDNN NPYSDV+WLAA+VQS+GELEFGQQ
Sbjct: 754  EAIPHAVATIRAADRKSPREAVEFILQLLKYNDNNENPYSDVFWLAALVQSVGELEFGQQ 813

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
            SI FLSSLLKRIDRLLQFDRLMPSYNGILTISCIR+L QIALKLS  + L+ V ELIKP+
Sbjct: 814  SIYFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLAQIALKLSGFIHLDHVFELIKPF 873

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R+  T+W+VR+EASRALLDLE HCNGI+AAL +F +YIEEE SLRGQVKL VHAMRLCQI
Sbjct: 874  RDSKTIWQVRIEASRALLDLEHHCNGINAALLLFIKYIEEEPSLRGQVKLGVHAMRLCQI 933

Query: 1563 KCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPR-TVQ 1387
            + GS    DIK++T       LESR AF+NVFLRH+LFCILQVL+GR PTLYGVP+  + 
Sbjct: 934  QGGSVSSEDIKATTLVALLHLLESRIAFNNVFLRHYLFCILQVLAGRSPTLYGVPKEKLP 993

Query: 1386 LTGEAETCSEQIKASAYFKLKMSIAPEPIVDAPNP-----VPDALPTPEAPREADAVSNG 1222
              G  E C+EQ K +    +     P+P     NP       D L  PEA +E D VSN 
Sbjct: 994  CMGNVEICNEQ-KNNFGAPVNEIRPPQPQPPMGNPSHSNHSHDNLAIPEASKEVDTVSNS 1052

Query: 1221 SERR-SVVKIRVRQSAASSRADEAENVFVGTSRGIQ-------DETERGGSSSMSVDAPV 1066
             +R+ +VVKIRV+QSA SS+A+EA+N     S G +        + +RG +SS+SVDAP 
Sbjct: 1053 HDRKTAVVKIRVKQSATSSKAEEADNGTAERSEGGERSEGRRNHDADRGATSSVSVDAPQ 1112

Query: 1065 RIPDEPMNVDCQILEEVNSCHDHVSHVTASIGSAKIANIEDEARKELQCTADSSKVDCEQ 886
            R   E +++  Q +EEVNS HDH S +TASIGSAKIA+  D   KELQCTADS       
Sbjct: 1113 RNSAEAVSISNQNIEEVNSFHDHGSRITASIGSAKIASEGDNFGKELQCTADSGNASVHH 1172

Query: 885  LHEDHSPATILNGNCVDPDAQKFASLRTISTGTYQCDAPPLATTGNPDLLXXXXXXXXXX 706
              +D S  +I+  + +D +A+K+ASL+T+S    + D PP                    
Sbjct: 1173 QPDDPSSPSIIQDSYIDAEAKKYASLQTLSIS--RDDGPPFQEKEKEK--KKKSKKKKKD 1228

Query: 705  XXXXXXXXXXXEHRNDPEYXXXXXXXXXXXXXXXXXXXQSEVAKVPPIEFPNTNVEPRVR 526
                         RNDPEY                     +  K    E      E +  
Sbjct: 1229 KEKKRKGEEHKGERNDPEY--------------LEKKRLKKEKKYKEKEMARILGEVKAA 1274

Query: 525  S-VLQSEDSNAPFLERQIPNEESRFKSASLALKPNPNERSGSKLVIKTVESKGDPSEGSS 349
            S  L+S+      L +   N++            N N     K+VI  +E++ +P++ +S
Sbjct: 1275 SGELKSKKEETTSLTQMGGNKQE---------ADNMNSSEPPKVVISKLETRTEPTQPTS 1325

Query: 348  VHKFRIKIKNRSLNKS 301
              KFRIKIK++ L+KS
Sbjct: 1326 APKFRIKIKSKPLSKS 1341



 Score =  431 bits (1109), Expect(2) = 0.0
 Identities = 207/292 (70%), Positives = 243/292 (83%), Gaps = 1/292 (0%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFRH +NK+GNLERPFLKEFFPRWVG  GCPVLRMG SYNKRKN+IELAVLR CTA
Sbjct: 471  LSTKEFRHFANKIGNLERPFLKEFFPRWVGLYGCPVLRMGFSYNKRKNIIELAVLRECTA 530

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
            T DS  S  + NP+ + R+GD+GWPG+M++RVYELDGM DHP LPM+G+  QL+EI CHS
Sbjct: 531  TIDSSVSVLNANPDSENRDGDIGWPGVMTVRVYELDGMSDHPDLPMAGDAWQLLEIACHS 590

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXD-LRANAESPLLWLRADPEMEYLTEIHFNQPIQ 2426
            KLAA+R+ KPKKGS+P             +R++ +SPLLW+RADPEMEYL EIHFNQP+Q
Sbjct: 591  KLAARRYQKPKKGSKPDGSDDNGDLPTVDMRSSVDSPLLWIRADPEMEYLAEIHFNQPVQ 650

Query: 2425 MWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAHT 2246
            MWINQLEKD+DVVAQAQAI  LE+LP+LSF+V+ AL NFL+DSKAFWRVRIEAA ALA T
Sbjct: 651  MWINQLEKDEDVVAQAQAITALESLPELSFSVLKALNNFLTDSKAFWRVRIEAALALAST 710

Query: 2245 ASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVMQRGHST 2090
            +SE+TD AGL HLVKFYKSRRFD ++GLP+PNDF DFPEYFVLE +    +T
Sbjct: 711  SSEETDMAGLQHLVKFYKSRRFDTDIGLPKPNDFSDFPEYFVLEAIPHAVAT 762


>ref|XP_012462994.1| PREDICTED: transcription initiation factor TFIID subunit 2 isoform X3
            [Gossypium raimondii] gi|823121319|ref|XP_012463074.1|
            PREDICTED: transcription initiation factor TFIID subunit
            2 isoform X3 [Gossypium raimondii]
            gi|763740314|gb|KJB07813.1| hypothetical protein
            B456_001G045800 [Gossypium raimondii]
          Length = 1199

 Score =  501 bits (1291), Expect(2) = 0.0
 Identities = 304/616 (49%), Positives = 383/616 (62%), Gaps = 15/616 (2%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHA+A +RA+D+ SPREAVEF+LQLLKYNDNN NPYSDV+WLAA+VQS+GELEFGQQ
Sbjct: 612  EAIPHAVATIRAADRKSPREAVEFILQLLKYNDNNENPYSDVFWLAALVQSVGELEFGQQ 671

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
            SI FLSSLLKRIDRLLQFDRLMPSYNGILTISCIR+L QIALKLS  + L+ V ELIKP+
Sbjct: 672  SIYFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLAQIALKLSGFIHLDHVFELIKPF 731

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R+  T+W+VR+EASRALLDLE HCNGI+AAL +F +YIEEE SLRGQVKL VHAMRLCQI
Sbjct: 732  RDSKTIWQVRIEASRALLDLEHHCNGINAALLLFIKYIEEEPSLRGQVKLGVHAMRLCQI 791

Query: 1563 KCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPR-TVQ 1387
            + GS    DIK++T       LESR AF+NVFLRH+LFCILQVL+GR PTLYGVP+  + 
Sbjct: 792  QGGSVSSEDIKATTLVALLHLLESRIAFNNVFLRHYLFCILQVLAGRSPTLYGVPKEKLP 851

Query: 1386 LTGEAETCSEQIKASAYFKLKMSIAPEPIVDAPNP-----VPDALPTPEAPREADAVSNG 1222
              G  E C+EQ K +    +     P+P     NP       D L  PEA +E D VSN 
Sbjct: 852  CMGNVEICNEQ-KNNFGAPVNEIRPPQPQPPMGNPSHSNHSHDNLAIPEASKEVDTVSNS 910

Query: 1221 SERR-SVVKIRVRQSAASSRADEAENVFVGTSRGIQ-------DETERGGSSSMSVDAPV 1066
             +R+ +VVKIRV+QSA SS+A+EA+N     S G +        + +RG +SS+SVDAP 
Sbjct: 911  HDRKTAVVKIRVKQSATSSKAEEADNGTAERSEGGERSEGRRNHDADRGATSSVSVDAPQ 970

Query: 1065 RIPDEPMNVDCQILEEVNSCHDHVSHVTASIGSAKIANIEDEARKELQCTADSSKVDCEQ 886
            R   E +++  Q +EEVNS HDH S +TASIGSAKIA+  D   KELQCTADS       
Sbjct: 971  RNSAEAVSISNQNIEEVNSFHDHGSRITASIGSAKIASEGDNFGKELQCTADSGNASVHH 1030

Query: 885  LHEDHSPATILNGNCVDPDAQKFASLRTISTGTYQCDAPPLATTGNPDLLXXXXXXXXXX 706
              +D S  +I+  + +D +A+K+ASL+T+S    + D PP                    
Sbjct: 1031 QPDDPSSPSIIQDSYIDAEAKKYASLQTLSIS--RDDGPPFQEKEKEK--KKKSKKKKKD 1086

Query: 705  XXXXXXXXXXXEHRNDPEYXXXXXXXXXXXXXXXXXXXQSEVAKVPPIEFPNTNVEPRVR 526
                         RNDPEY                     +  K    E      E +  
Sbjct: 1087 KEKKRKGEEHKGERNDPEY--------------LEKKRLKKEKKYKEKEMARILGEVKAA 1132

Query: 525  S-VLQSEDSNAPFLERQIPNEESRFKSASLALKPNPNERSGSKLVIKTVESKGDPSEGSS 349
            S  L+S+      L +   N++            N N     K+VI  +E++ +P++ +S
Sbjct: 1133 SGELKSKKEETTSLTQMGGNKQE---------ADNMNSSEPPKVVISKLETRTEPTQPTS 1183

Query: 348  VHKFRIKIKNRSLNKS 301
              KFRIKIK++ L+KS
Sbjct: 1184 APKFRIKIKSKPLSKS 1199



 Score =  431 bits (1109), Expect(2) = 0.0
 Identities = 207/292 (70%), Positives = 243/292 (83%), Gaps = 1/292 (0%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFRH +NK+GNLERPFLKEFFPRWVG  GCPVLRMG SYNKRKN+IELAVLR CTA
Sbjct: 329  LSTKEFRHFANKIGNLERPFLKEFFPRWVGLYGCPVLRMGFSYNKRKNIIELAVLRECTA 388

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
            T DS  S  + NP+ + R+GD+GWPG+M++RVYELDGM DHP LPM+G+  QL+EI CHS
Sbjct: 389  TIDSSVSVLNANPDSENRDGDIGWPGVMTVRVYELDGMSDHPDLPMAGDAWQLLEIACHS 448

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXD-LRANAESPLLWLRADPEMEYLTEIHFNQPIQ 2426
            KLAA+R+ KPKKGS+P             +R++ +SPLLW+RADPEMEYL EIHFNQP+Q
Sbjct: 449  KLAARRYQKPKKGSKPDGSDDNGDLPTVDMRSSVDSPLLWIRADPEMEYLAEIHFNQPVQ 508

Query: 2425 MWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAHT 2246
            MWINQLEKD+DVVAQAQAI  LE+LP+LSF+V+ AL NFL+DSKAFWRVRIEAA ALA T
Sbjct: 509  MWINQLEKDEDVVAQAQAITALESLPELSFSVLKALNNFLTDSKAFWRVRIEAALALAST 568

Query: 2245 ASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVMQRGHST 2090
            +SE+TD AGL HLVKFYKSRRFD ++GLP+PNDF DFPEYFVLE +    +T
Sbjct: 569  SSEETDMAGLQHLVKFYKSRRFDTDIGLPKPNDFSDFPEYFVLEAIPHAVAT 620


>ref|XP_008456406.1| PREDICTED: transcription initiation factor TFIID subunit 2 [Cucumis
            melo]
          Length = 1361

 Score =  509 bits (1311), Expect(2) = 0.0
 Identities = 320/646 (49%), Positives = 398/646 (61%), Gaps = 45/646 (6%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHA+AMVR +D+ SPREAVEFVLQLLKYNDNNGNPYSDV+WLAA+VQS+GELEFGQQ
Sbjct: 753  EAIPHAVAMVRGTDQKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQ 812

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
            SILFL+SLLKRIDRLLQFDRLMPSYNGILTISCIR+LTQIALKLS  + L+R+ ELI+P+
Sbjct: 813  SILFLASLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIALKLSGLLSLDRIIELIRPF 872

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R+  ++W+VR+EA+R+LLDLE+HCNGIDA L +F +Y+EEE SLRGQ KLAVH MRLCQI
Sbjct: 873  RDFNSIWQVRIEATRSLLDLEYHCNGIDATLLLFIKYLEEENSLRGQAKLAVHVMRLCQI 932

Query: 1563 KCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPRTVQL 1384
               S     + + T       LE   AF+NV LRH+LFCILQVL+GRPPTLYGVPR  + 
Sbjct: 933  MRRSGSNDVVNNDTLVALLLLLEGNMAFNNVCLRHYLFCILQVLAGRPPTLYGVPREYKT 992

Query: 1383 --TGEAETCSEQ------------------IKASAYFK-LKMSIAPEPIVDAPNPVPDAL 1267
               G+  TCSEQ                  + A A    +  S++ EP+  AP P PD+L
Sbjct: 993  LHMGDTGTCSEQKRMLTSLIPEFNPPEQSSVSAVAPMPCIPASLSSEPL-HAPTPRPDSL 1051

Query: 1266 PTP--------------------EAPREADAVSNGSERR-SVVKIRVRQSAASSRADEAE 1150
              P                    EAPREA +VS+  ER+  VVKI+VR SAA+SRAD A+
Sbjct: 1052 AVPELSKEGGEIAEVPKQAMAIVEAPREAASVSSSHERKLPVVKIKVRSSAATSRAD-AD 1110

Query: 1149 NVFVGTSRGIQDETERGGSSSMSVDAPVRIPDEPMNVDCQILEEVNSCHDHVSHVTASIG 970
            N+    S  +  ET+ G SSS+SVDAP R   E  ++  +ILEEVNSCHDH SH+TASIG
Sbjct: 1111 NLTTERSHAVPRETDVGPSSSVSVDAPPRNIAEATSISNRILEEVNSCHDHGSHMTASIG 1170

Query: 969  SAKIANIEDEARKELQCTADSSKVDCEQLH-EDHSPATILNGNCVDPDAQKFASLRTIST 793
            SAK+A+  DE  KE QCTADSS         ED S ++I+  N +D DAQK+ASL+T+S 
Sbjct: 1171 SAKLASYGDELGKEFQCTADSSSRAFGHFQPEDPSSSSIIQDNNIDADAQKYASLQTLSL 1230

Query: 792  GTYQCDAPPLATTGNPDLLXXXXXXXXXXXXXXXXXXXXXEHRNDPEYXXXXXXXXXXXX 613
                 +   LA++ +                         EHRNDPEY            
Sbjct: 1231 PQ---NDHGLASSHS----RHGKKEKKKDKEKKRKRESHKEHRNDPEYIERKR------- 1276

Query: 612  XXXXXXXQSEVAKVPPIEFPNTNVEPRVRSVLQSEDSNAPFLERQIPNEESRFKSASLAL 433
                            ++      E  +  +L  E    P    +I  +E   KS  + L
Sbjct: 1277 ----------------LKKEKKQKEKEMAKLLNEEVKPQPLAMPRI--KEPPTKSTPMQL 1318

Query: 432  KPNPNERSGSKLVIKTVESKGDPSEG--SSVHKFRIKIKNRSLNKS 301
            +   NE SGS+L+I  V+SK + SEG  S+  K RIK KNR+LN S
Sbjct: 1319 E--TNEPSGSRLII-GVQSKPEASEGTTSAAPKLRIKFKNRTLNNS 1361



 Score =  417 bits (1073), Expect(2) = 0.0
 Identities = 200/286 (69%), Positives = 234/286 (81%), Gaps = 1/286 (0%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFR L+NK+GNLERPFLKEFFPRWV SCGCP+LRMG SYNKRKN++E+AV R CTA
Sbjct: 479  LSTKEFRQLANKIGNLERPFLKEFFPRWVESCGCPLLRMGFSYNKRKNMVEMAVSRECTA 538

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
            T  +   +         R+ D GWPGMMSIR+YELDG++DHP+LPM+GE  QL+EIQCHS
Sbjct: 539  TPATSVEN---------RDSDAGWPGMMSIRIYELDGVFDHPVLPMTGESWQLLEIQCHS 589

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXD-LRANAESPLLWLRADPEMEYLTEIHFNQPIQ 2426
            KLAA+R  K KKGS+P             +R++ ESPLLWLRADPEMEYL EIHF+QP+Q
Sbjct: 590  KLAARRLQKTKKGSKPDGSDDNADIPALDIRSSVESPLLWLRADPEMEYLAEIHFHQPVQ 649

Query: 2425 MWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAHT 2246
            MWINQLEKDKDV+AQAQAIATLE LPQ SF++VNAL NFL D KAFWRVRIEAA A+A T
Sbjct: 650  MWINQLEKDKDVIAQAQAIATLEMLPQPSFSIVNALNNFLRDPKAFWRVRIEAALAMAKT 709

Query: 2245 ASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVM 2108
            ASEDTDWAGLL+L+KF+KS+RFD + GLP+PN+F DFPEYFVLE +
Sbjct: 710  ASEDTDWAGLLNLIKFFKSQRFDADTGLPKPNEFRDFPEYFVLEAI 755


>ref|XP_004137463.1| PREDICTED: transcription initiation factor TFIID subunit 2 [Cucumis
            sativus] gi|700209009|gb|KGN64105.1| hypothetical protein
            Csa_1G042170 [Cucumis sativus]
          Length = 1362

 Score =  505 bits (1300), Expect(2) = 0.0
 Identities = 319/646 (49%), Positives = 393/646 (60%), Gaps = 45/646 (6%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHA+AMVR +D+ SPREAVEFVLQLLKYNDNNGNPYSDV+WLAA+VQS+GELEFGQQ
Sbjct: 753  EAIPHAVAMVRGTDQKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQ 812

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
            SILFL+SLLKRIDRLLQFDRLMPSYNGILTISCIR+LTQIALKLS  + L+R+ ELI+P+
Sbjct: 813  SILFLASLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIALKLSGLLSLDRIIELIRPF 872

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R+  ++W+VR+EA+R+LLDLE+HCNGIDA L +F +Y+EEE SLRGQVKLAVH MRLCQI
Sbjct: 873  RDFNSMWQVRIEATRSLLDLEYHCNGIDATLLLFIKYLEEENSLRGQVKLAVHVMRLCQI 932

Query: 1563 KCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPRTVQL 1384
               S     + + T       LE   AF+NV+LRH+LF ILQVLSGR PTLYGVPR  + 
Sbjct: 933  MRRSGSNDVVNNDTLVALLLLLEGNMAFNNVYLRHYLFSILQVLSGRSPTLYGVPREYKT 992

Query: 1383 --TGEAETCSEQIKASAYF---------KLKMSIAPEPIVDA---------PNPVPDALP 1264
               G+  T SEQ +                  ++AP P + A         P P PD L 
Sbjct: 993  LHMGDTGTFSEQKRMLTSIIPEFNPPEPSSVSAVAPMPCIPATLSSEPLHVPTPRPDNLA 1052

Query: 1263 TP--------------------EAPREADAVSNGSERR-SVVKIRVRQSAASSRADEAEN 1147
             P                    EAPREA +VS+  ER+  VVKI+VR SAA+SRAD A+N
Sbjct: 1053 VPELSKEEGAIAEDPKQAMAIVEAPREAASVSSSHERKLPVVKIKVRSSAATSRAD-ADN 1111

Query: 1146 VFVGTSRGIQDETERGGSSSMSVDAPVRIPDEPMNVDCQILEEVNSCHDHVSHVTASIGS 967
            +    S     ET+ G SSS+SVDAP R   E  ++  +ILEEVNSCHDH SH+TASIGS
Sbjct: 1112 LTTERSHAAPRETDVGPSSSVSVDAPPRNTAEATSISNRILEEVNSCHDHGSHMTASIGS 1171

Query: 966  AKIANIEDEARKELQCTADSSKVDCEQLH-EDHSPATILNGNCVDPDAQKFASLRTISTG 790
            AK+A+  DE  KE QCTADSS         ED S ++I+  N +D DAQK+ASL+T+S  
Sbjct: 1172 AKLASYGDELGKEFQCTADSSSRAFGHFQPEDPSSSSIIQDNNIDADAQKYASLQTLSLP 1231

Query: 789  TYQCDAPPLATTGNPDLLXXXXXXXXXXXXXXXXXXXXXEHRNDPEYXXXXXXXXXXXXX 610
             +      LA++ +                         EHRNDPEY             
Sbjct: 1232 QHD---HGLASSHS----RHGKKEKKKDKEKKRKRESHKEHRNDPEY------IERKRLK 1278

Query: 609  XXXXXXQSEVAKVPPIEF-PNTNVEPRVRSVLQSEDSNAPFLERQIPNEESRFKSASLAL 433
                  + E+AK+   E  P     PR++                    E   KS  + L
Sbjct: 1279 KEKKQKEKEMAKLLNEEVKPQPTAMPRIK--------------------EPPTKSTPVQL 1318

Query: 432  KPNPNERSGSKLVIKTVESKGDPSEG--SSVHKFRIKIKNRSLNKS 301
            +   NE SGS+L+I +V SK + SEG  S+  K RIK KNR+LN S
Sbjct: 1319 E--TNEPSGSRLIIGSVHSKPEASEGTTSAAPKLRIKFKNRTLNNS 1362



 Score =  419 bits (1077), Expect(2) = 0.0
 Identities = 203/286 (70%), Positives = 236/286 (82%), Gaps = 1/286 (0%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFR L+NK+GNLERPFLKEFFPRWV SCGCP+LRMG SYNKRKN++E+AV R CTA
Sbjct: 479  LSTKEFRQLANKIGNLERPFLKEFFPRWVESCGCPLLRMGFSYNKRKNMVEMAVSRECTA 538

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
            T       P+ N E   R+ D GWPGMMSIR+YELDG++DHP+LPM+GE  QL+EIQCHS
Sbjct: 539  T-------PATNVEN--RDSDAGWPGMMSIRIYELDGVFDHPVLPMTGESWQLLEIQCHS 589

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXD-LRANAESPLLWLRADPEMEYLTEIHFNQPIQ 2426
            KLAA+R  K KKGS+P             +R++ ESPLLWLRADPEMEYL EIHF+QP+Q
Sbjct: 590  KLAARRLQKTKKGSKPDGSDDNADIPALDIRSSVESPLLWLRADPEMEYLAEIHFHQPVQ 649

Query: 2425 MWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAHT 2246
            MWINQLEKDKDV+AQAQAIATLE LPQ SF++VNAL NFL D KAFWRVRIEAA A+A T
Sbjct: 650  MWINQLEKDKDVIAQAQAIATLEMLPQPSFSIVNALNNFLKDPKAFWRVRIEAALAMAKT 709

Query: 2245 ASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVM 2108
            ASEDTDWAGLL+L+KF+KS+RFD + GLP+PN+F DFPEYFVLE +
Sbjct: 710  ASEDTDWAGLLNLIKFFKSQRFDADTGLPKPNEFRDFPEYFVLEAI 755


>ref|XP_010932628.1| PREDICTED: transcription initiation factor TFIID subunit 2 [Elaeis
            guineensis]
          Length = 1351

 Score =  479 bits (1234), Expect(2) = 0.0
 Identities = 268/459 (58%), Positives = 332/459 (72%), Gaps = 16/459 (3%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHA+++VRA+DK SPREA+EFVLQLLKYNDNNGNPYSDVYWLAA+VQSIG LEFGQQ
Sbjct: 768  EAIPHAVSLVRAADKKSPREAIEFVLQLLKYNDNNGNPYSDVYWLAALVQSIGGLEFGQQ 827

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
            ++L LSSLLKR+DRLLQFD LMPSYNGILTISCIR+L QIALK+S S+PL+RV ELIKP+
Sbjct: 828  AVL-LSSLLKRVDRLLQFDSLMPSYNGILTISCIRTLAQIALKMSTSIPLDRVCELIKPF 886

Query: 1743 REL-GTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQ 1567
            R +  T WKVR+EA+R LLDLEF+C G+DAAL +F +++EEE S RGQ KLA+H M LCQ
Sbjct: 887  RNIMRTSWKVRMEANRILLDLEFYCKGLDAALCLFMKFLEEEPSFRGQSKLALHVMHLCQ 946

Query: 1566 IKCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPR-TV 1390
            +   S ++ DI   T       L SRKAF+NVFLRHHLFCILQV+ GR PTLYGVP+  V
Sbjct: 947  VNVESQIDSDIACPTLVALLHLLASRKAFNNVFLRHHLFCILQVVVGRSPTLYGVPKINV 1006

Query: 1389 QLTGEAETCSEQIKASAYFKLKMSIAPEPIVDA--------------PNPVPDALPTPEA 1252
                 AETC+EQ+   A  KLK+S   EP+ D                +PV + LP  E 
Sbjct: 1007 HPVVAAETCTEQLSRPAPLKLKISKPQEPLRDTNPPHALPIAESAKDADPVSNVLPFAET 1066

Query: 1251 PREADAVSNGSERRSVVKIRVRQSAASSRADEAENVFVGTSRGIQDETERGGSSSMSVDA 1072
             +EAD VSN SER++VVKIRV+Q  +SS+AD+ ++  +  SRG Q+E E G  SS+SVDA
Sbjct: 1067 AKEADTVSNCSERKNVVKIRVKQPVSSSKADDVDHQ-MDHSRGAQNEAELGPCSSVSVDA 1125

Query: 1071 PVRIPDEPMNVDCQILEEVNSCHDHVSHVTASIGSAKIANIEDEARKELQCTADSSKVDC 892
            P R  +EP+NV  Q  EEVNS H H S +TASIGSAK+ + +DE  KELQCTADS     
Sbjct: 1126 PTRGANEPLNVSNQNNEEVNSSHGHESRMTASIGSAKLVS-KDEIGKELQCTADSRS--- 1181

Query: 891  EQLHEDHSPATILNGNCVDPDAQKFASLRTISTGTYQCD 775
            + L +D   + ++N +  +  AQK +SL+T S G +  D
Sbjct: 1182 DVLSKDQL-SPVVNVSDGEAVAQKTSSLQTFSIGRHDGD 1219



 Score =  434 bits (1115), Expect(2) = 0.0
 Identities = 210/288 (72%), Positives = 244/288 (84%), Gaps = 3/288 (1%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            L TKEFRHL+NKVGNLERPFLKEFFPRWV +CGCPV+RMGLSYNKR+N+IELAV+RGCT 
Sbjct: 488  LGTKEFRHLANKVGNLERPFLKEFFPRWVETCGCPVMRMGLSYNKRRNMIELAVMRGCTE 547

Query: 2782 -TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCH 2606
             T+ SG     GNP+ + REG+ GWPGMMSIRV+ELDGMYDHP+LPM+GE  QL+EIQCH
Sbjct: 548  KTRVSG-----GNPDSEIREGETGWPGMMSIRVHELDGMYDHPVLPMAGESWQLLEIQCH 602

Query: 2605 SKLAAKRFPKPKKGSRPXXXXXXXXXXXD--LRANAESPLLWLRADPEMEYLTEIHFNQP 2432
            SKLAAKRF K KKGS+P              +R   +SPLLW+R DPEMEYL EIH +QP
Sbjct: 603  SKLAAKRFQKQKKGSKPDGSDDNVDAVSTQDIRTGMDSPLLWIRVDPEMEYLAEIHCHQP 662

Query: 2431 IQMWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALA 2252
            +QMWINQLEKDKDVVAQ+QAI+ L+ LPQLSF++VNAL +FL+DSKAFWRVRIEAA+ALA
Sbjct: 663  VQMWINQLEKDKDVVAQSQAISMLQKLPQLSFSIVNALNSFLTDSKAFWRVRIEAAYALA 722

Query: 2251 HTASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVM 2108
            +TASE+TD AGLLHL+KFYKSRRFD ++GLPRPNDFHD PEYFVLE +
Sbjct: 723  YTASEETDLAGLLHLIKFYKSRRFDADIGLPRPNDFHDVPEYFVLEAI 770


>gb|KJB07814.1| hypothetical protein B456_001G045800 [Gossypium raimondii]
          Length = 1334

 Score =  479 bits (1232), Expect(2) = 0.0
 Identities = 295/616 (47%), Positives = 374/616 (60%), Gaps = 15/616 (2%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHA+A +RA+D+ SPREAVEF+LQLLKYNDNN NPYSDV+WLAA+VQS+GELEFGQQ
Sbjct: 757  EAIPHAVATIRAADRKSPREAVEFILQLLKYNDNNENPYSDVFWLAALVQSVGELEFGQQ 816

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
                      RIDRLLQFDRLMPSYNGILTISCIR+L QIALKLS  + L+ V ELIKP+
Sbjct: 817  ----------RIDRLLQFDRLMPSYNGILTISCIRTLAQIALKLSGFIHLDHVFELIKPF 866

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R+  T+W+VR+EASRALLDLE HCNGI+AAL +F +YIEEE SLRGQVKL VHAMRLCQI
Sbjct: 867  RDSKTIWQVRIEASRALLDLEHHCNGINAALLLFIKYIEEEPSLRGQVKLGVHAMRLCQI 926

Query: 1563 KCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPR-TVQ 1387
            + GS    DIK++T       LESR AF+NVFLRH+LFCILQVL+GR PTLYGVP+  + 
Sbjct: 927  QGGSVSSEDIKATTLVALLHLLESRIAFNNVFLRHYLFCILQVLAGRSPTLYGVPKEKLP 986

Query: 1386 LTGEAETCSEQIKASAYFKLKMSIAPEPIVDAPNP-----VPDALPTPEAPREADAVSNG 1222
              G  E C+EQ K +    +     P+P     NP       D L  PEA +E D VSN 
Sbjct: 987  CMGNVEICNEQ-KNNFGAPVNEIRPPQPQPPMGNPSHSNHSHDNLAIPEASKEVDTVSNS 1045

Query: 1221 SERR-SVVKIRVRQSAASSRADEAENVFVGTSRGIQ-------DETERGGSSSMSVDAPV 1066
             +R+ +VVKIRV+QSA SS+A+EA+N     S G +        + +RG +SS+SVDAP 
Sbjct: 1046 HDRKTAVVKIRVKQSATSSKAEEADNGTAERSEGGERSEGRRNHDADRGATSSVSVDAPQ 1105

Query: 1065 RIPDEPMNVDCQILEEVNSCHDHVSHVTASIGSAKIANIEDEARKELQCTADSSKVDCEQ 886
            R   E +++  Q +EEVNS HDH S +TASIGSAKIA+  D   KELQCTADS       
Sbjct: 1106 RNSAEAVSISNQNIEEVNSFHDHGSRITASIGSAKIASEGDNFGKELQCTADSGNASVHH 1165

Query: 885  LHEDHSPATILNGNCVDPDAQKFASLRTISTGTYQCDAPPLATTGNPDLLXXXXXXXXXX 706
              +D S  +I+  + +D +A+K+ASL+T+S    + D PP                    
Sbjct: 1166 QPDDPSSPSIIQDSYIDAEAKKYASLQTLSIS--RDDGPPFQEKEKEK--KKKSKKKKKD 1221

Query: 705  XXXXXXXXXXXEHRNDPEYXXXXXXXXXXXXXXXXXXXQSEVAKVPPIEFPNTNVEPRVR 526
                         RNDPEY                     +  K    E      E +  
Sbjct: 1222 KEKKRKGEEHKGERNDPEY--------------LEKKRLKKEKKYKEKEMARILGEVKAA 1267

Query: 525  S-VLQSEDSNAPFLERQIPNEESRFKSASLALKPNPNERSGSKLVIKTVESKGDPSEGSS 349
            S  L+S+      L +   N++            N N     K+VI  +E++ +P++ +S
Sbjct: 1268 SGELKSKKEETTSLTQMGGNKQE---------ADNMNSSEPPKVVISKLETRTEPTQPTS 1318

Query: 348  VHKFRIKIKNRSLNKS 301
              KFRIKIK++ L+KS
Sbjct: 1319 APKFRIKIKSKPLSKS 1334



 Score =  431 bits (1109), Expect(2) = 0.0
 Identities = 207/292 (70%), Positives = 243/292 (83%), Gaps = 1/292 (0%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFRH +NK+GNLERPFLKEFFPRWVG  GCPVLRMG SYNKRKN+IELAVLR CTA
Sbjct: 474  LSTKEFRHFANKIGNLERPFLKEFFPRWVGLYGCPVLRMGFSYNKRKNIIELAVLRECTA 533

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
            T DS  S  + NP+ + R+GD+GWPG+M++RVYELDGM DHP LPM+G+  QL+EI CHS
Sbjct: 534  TIDSSVSVLNANPDSENRDGDIGWPGVMTVRVYELDGMSDHPDLPMAGDAWQLLEIACHS 593

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXD-LRANAESPLLWLRADPEMEYLTEIHFNQPIQ 2426
            KLAA+R+ KPKKGS+P             +R++ +SPLLW+RADPEMEYL EIHFNQP+Q
Sbjct: 594  KLAARRYQKPKKGSKPDGSDDNGDLPTVDMRSSVDSPLLWIRADPEMEYLAEIHFNQPVQ 653

Query: 2425 MWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAHT 2246
            MWINQLEKD+DVVAQAQAI  LE+LP+LSF+V+ AL NFL+DSKAFWRVRIEAA ALA T
Sbjct: 654  MWINQLEKDEDVVAQAQAITALESLPELSFSVLKALNNFLTDSKAFWRVRIEAALALAST 713

Query: 2245 ASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVMQRGHST 2090
            +SE+TD AGL HLVKFYKSRRFD ++GLP+PNDF DFPEYFVLE +    +T
Sbjct: 714  SSEETDMAGLQHLVKFYKSRRFDTDIGLPKPNDFSDFPEYFVLEAIPHAVAT 765


>gb|KJB07812.1| hypothetical protein B456_001G045800 [Gossypium raimondii]
          Length = 1189

 Score =  479 bits (1232), Expect(2) = 0.0
 Identities = 295/616 (47%), Positives = 374/616 (60%), Gaps = 15/616 (2%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHA+A +RA+D+ SPREAVEF+LQLLKYNDNN NPYSDV+WLAA+VQS+GELEFGQQ
Sbjct: 612  EAIPHAVATIRAADRKSPREAVEFILQLLKYNDNNENPYSDVFWLAALVQSVGELEFGQQ 671

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
                      RIDRLLQFDRLMPSYNGILTISCIR+L QIALKLS  + L+ V ELIKP+
Sbjct: 672  ----------RIDRLLQFDRLMPSYNGILTISCIRTLAQIALKLSGFIHLDHVFELIKPF 721

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R+  T+W+VR+EASRALLDLE HCNGI+AAL +F +YIEEE SLRGQVKL VHAMRLCQI
Sbjct: 722  RDSKTIWQVRIEASRALLDLEHHCNGINAALLLFIKYIEEEPSLRGQVKLGVHAMRLCQI 781

Query: 1563 KCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPR-TVQ 1387
            + GS    DIK++T       LESR AF+NVFLRH+LFCILQVL+GR PTLYGVP+  + 
Sbjct: 782  QGGSVSSEDIKATTLVALLHLLESRIAFNNVFLRHYLFCILQVLAGRSPTLYGVPKEKLP 841

Query: 1386 LTGEAETCSEQIKASAYFKLKMSIAPEPIVDAPNP-----VPDALPTPEAPREADAVSNG 1222
              G  E C+EQ K +    +     P+P     NP       D L  PEA +E D VSN 
Sbjct: 842  CMGNVEICNEQ-KNNFGAPVNEIRPPQPQPPMGNPSHSNHSHDNLAIPEASKEVDTVSNS 900

Query: 1221 SERR-SVVKIRVRQSAASSRADEAENVFVGTSRGIQ-------DETERGGSSSMSVDAPV 1066
             +R+ +VVKIRV+QSA SS+A+EA+N     S G +        + +RG +SS+SVDAP 
Sbjct: 901  HDRKTAVVKIRVKQSATSSKAEEADNGTAERSEGGERSEGRRNHDADRGATSSVSVDAPQ 960

Query: 1065 RIPDEPMNVDCQILEEVNSCHDHVSHVTASIGSAKIANIEDEARKELQCTADSSKVDCEQ 886
            R   E +++  Q +EEVNS HDH S +TASIGSAKIA+  D   KELQCTADS       
Sbjct: 961  RNSAEAVSISNQNIEEVNSFHDHGSRITASIGSAKIASEGDNFGKELQCTADSGNASVHH 1020

Query: 885  LHEDHSPATILNGNCVDPDAQKFASLRTISTGTYQCDAPPLATTGNPDLLXXXXXXXXXX 706
              +D S  +I+  + +D +A+K+ASL+T+S    + D PP                    
Sbjct: 1021 QPDDPSSPSIIQDSYIDAEAKKYASLQTLSIS--RDDGPPFQEKEKEK--KKKSKKKKKD 1076

Query: 705  XXXXXXXXXXXEHRNDPEYXXXXXXXXXXXXXXXXXXXQSEVAKVPPIEFPNTNVEPRVR 526
                         RNDPEY                     +  K    E      E +  
Sbjct: 1077 KEKKRKGEEHKGERNDPEY--------------LEKKRLKKEKKYKEKEMARILGEVKAA 1122

Query: 525  S-VLQSEDSNAPFLERQIPNEESRFKSASLALKPNPNERSGSKLVIKTVESKGDPSEGSS 349
            S  L+S+      L +   N++            N N     K+VI  +E++ +P++ +S
Sbjct: 1123 SGELKSKKEETTSLTQMGGNKQE---------ADNMNSSEPPKVVISKLETRTEPTQPTS 1173

Query: 348  VHKFRIKIKNRSLNKS 301
              KFRIKIK++ L+KS
Sbjct: 1174 APKFRIKIKSKPLSKS 1189



 Score =  431 bits (1109), Expect(2) = 0.0
 Identities = 207/292 (70%), Positives = 243/292 (83%), Gaps = 1/292 (0%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFRH +NK+GNLERPFLKEFFPRWVG  GCPVLRMG SYNKRKN+IELAVLR CTA
Sbjct: 329  LSTKEFRHFANKIGNLERPFLKEFFPRWVGLYGCPVLRMGFSYNKRKNIIELAVLRECTA 388

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
            T DS  S  + NP+ + R+GD+GWPG+M++RVYELDGM DHP LPM+G+  QL+EI CHS
Sbjct: 389  TIDSSVSVLNANPDSENRDGDIGWPGVMTVRVYELDGMSDHPDLPMAGDAWQLLEIACHS 448

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXD-LRANAESPLLWLRADPEMEYLTEIHFNQPIQ 2426
            KLAA+R+ KPKKGS+P             +R++ +SPLLW+RADPEMEYL EIHFNQP+Q
Sbjct: 449  KLAARRYQKPKKGSKPDGSDDNGDLPTVDMRSSVDSPLLWIRADPEMEYLAEIHFNQPVQ 508

Query: 2425 MWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAHT 2246
            MWINQLEKD+DVVAQAQAI  LE+LP+LSF+V+ AL NFL+DSKAFWRVRIEAA ALA T
Sbjct: 509  MWINQLEKDEDVVAQAQAITALESLPELSFSVLKALNNFLTDSKAFWRVRIEAALALAST 568

Query: 2245 ASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVMQRGHST 2090
            +SE+TD AGL HLVKFYKSRRFD ++GLP+PNDF DFPEYFVLE +    +T
Sbjct: 569  SSEETDMAGLQHLVKFYKSRRFDTDIGLPKPNDFSDFPEYFVLEAIPHAVAT 620


>emb|CDO98474.1| unnamed protein product [Coffea canephora]
          Length = 1445

 Score =  464 bits (1195), Expect(2) = 0.0
 Identities = 220/287 (76%), Positives = 250/287 (87%), Gaps = 2/287 (0%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFRH +NKVGNLERPFLKEFFPRWVGSCGCPVL+MG SYNKRKN+IELAVLRGCTA
Sbjct: 477  LSTKEFRHFANKVGNLERPFLKEFFPRWVGSCGCPVLKMGFSYNKRKNMIELAVLRGCTA 536

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
              D   +  + NP+ + REGDVGWPGMMSIRV+ELDGMYDHPILPM+G+  QL+EIQCHS
Sbjct: 537  RPDPTAAFSNANPDSEKREGDVGWPGMMSIRVHELDGMYDHPILPMAGDSWQLLEIQCHS 596

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXDL--RANAESPLLWLRADPEMEYLTEIHFNQPI 2429
            KLAAKRF KP+KG +P            L  R+N++SPLLWLRADPEMEYL EIHFNQP+
Sbjct: 597  KLAAKRFQKPRKGLKPDGSDDNGDSVPALDTRSNSDSPLLWLRADPEMEYLAEIHFNQPV 656

Query: 2428 QMWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAH 2249
            QMW+NQLEKDKDVVAQAQAIA LEALPQ SF+++NAL NFL+D+KAFWR+RIEAAFALA 
Sbjct: 657  QMWVNQLEKDKDVVAQAQAIAMLEALPQQSFSIINALNNFLTDTKAFWRIRIEAAFALAM 716

Query: 2248 TASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVM 2108
            TASE+TDWAGLLHL+KFYKSRRFD ++GLP+PNDFHDF EYFVLEV+
Sbjct: 717  TASEETDWAGLLHLIKFYKSRRFDPDIGLPKPNDFHDFQEYFVLEVI 763



 Score =  442 bits (1138), Expect(2) = 0.0
 Identities = 301/712 (42%), Positives = 391/712 (54%), Gaps = 112/712 (15%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            E IP AIA VR +DK SPREAVEF+LQLLKYNDNNGN YSDV+WLAA+VQSIGELEFGQQ
Sbjct: 761  EVIPLAIATVRTADKKSPREAVEFILQLLKYNDNNGNFYSDVFWLAALVQSIGELEFGQQ 820

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
            +I++LSSLLKR+DRLL FDRLMPSYNGILTISCIRSLTQIA+KLS  VPL+RV ELI+P+
Sbjct: 821  TIIYLSSLLKRLDRLLHFDRLMPSYNGILTISCIRSLTQIAIKLSEFVPLDRVIELIQPF 880

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R    +W+VRVEA RALLDLEF   GIDAAL +F +Y+ EE+SLRGQVKL VHA+RLCQ+
Sbjct: 881  RTFKAVWQVRVEAGRALLDLEFQSAGIDAALTLFIKYLNEESSLRGQVKLGVHALRLCQM 940

Query: 1563 KCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPRTVQL 1384
            + GSD + D+KS T       LES  +F+N+ LRHH FCILQVL+ R PTL+G PR   L
Sbjct: 941  RTGSDPDNDVKSDTLVALLRLLESPMSFNNITLRHHFFCILQVLARRAPTLFGAPRDETL 1000

Query: 1383 -TGEAETCSEQIKASAYFKLKMSIAPEPIVDAPN-------------------------- 1285
              G AETCSE +K      +K S  PEP ++A +                          
Sbjct: 1001 RMGHAETCSE-LKNIFAALVKQSKPPEPSLEALDLERDGDGDGSVFPEASQARDVLSNGH 1059

Query: 1284 --------PVPDALPTPEAPREAD------------------------------------ 1237
                      PD L  PEA READ                                    
Sbjct: 1060 ALTKAINIAEPDGLLVPEANREADTHLGDNEQRNRVAELGEKTPSNSREQMKPVAELLHD 1119

Query: 1236 ------------AVSNGSERRS-VVKIRVRQSAASSRADEAENVFVGTSRGIQDETERGG 1096
                        +VSNG ER+  V + +V+ SAASSRA++ +N  +  S+    + ERG 
Sbjct: 1120 NLVVAEASKENDSVSNGLERKKPVFRFKVKHSAASSRAEDPDNAILERSQDGHADAERGA 1179

Query: 1095 SSSMSVDAPVRIPDEPMNVDCQILEEVNSCHDHVSHVTASIGSAKIANIEDEARKELQCT 916
            SSS+SVDAP +I  E  +   Q LE+VNS HD  S VTASIGSAK+A   D+  KELQCT
Sbjct: 1180 SSSVSVDAPQKIVAETFSTGNQNLEDVNSSHDVGSRVTASIGSAKLA--ADDV-KELQCT 1236

Query: 915  ADSSKVDCEQLHEDHSPATILNGNCVD-PDAQKFASLRTISTGTYQCDAPPLATTGNPDL 739
            ADSSKV       DH   +I+  + ++   + K+ASL++++    +              
Sbjct: 1237 ADSSKVYVVSPPGDHISTSIVKDDHLEMMISNKYASLKSLTRDKKK-------------- 1282

Query: 738  LXXXXXXXXXXXXXXXXXXXXXEHRNDPEYXXXXXXXXXXXXXXXXXXXQSEVAKVPPIE 559
                                   HRNDPE+                   + E++K+   E
Sbjct: 1283 -----DKKQHKEKKKRKRDEQKGHRNDPEH------LERKRLKKEKKRKEKELSKLMSDE 1331

Query: 558  F-PNTNVEPRVRSVLQ---SEDSNAPFLERQIPNEESRFKS------------------- 448
               +++VE + +  +    S D  A  +E +  N +S  +S                   
Sbjct: 1332 AKASSSVELQRKKGIPTGISRDEQASQVEHERTNYDSETRSGGTGGEGKAPPVGSDRKKD 1391

Query: 447  ---ASLALKPN-PNERSGSKLVIKTVESKGDPSEGSSVHKFRIKIKNRSLNK 304
               +  + +PN P E SG+K+VIK ++S  + ++ SS H+ +IKIK R+L K
Sbjct: 1392 DAGSGASAQPNPPGETSGAKVVIKPLDSSVNATQSSSSHRLKIKIKKRTLEK 1443


>ref|XP_010037343.1| PREDICTED: transcription initiation factor TFIID subunit 2 isoform X1
            [Eucalyptus grandis]
          Length = 1328

 Score =  459 bits (1181), Expect(2) = 0.0
 Identities = 286/604 (47%), Positives = 366/604 (60%), Gaps = 4/604 (0%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHA+AMVR +D  SPREAVEFVLQLLKYNDNNGN YSDV+WLA +VQSIGELEFGQQ
Sbjct: 760  EAIPHAVAMVRGADGKSPREAVEFVLQLLKYNDNNGNIYSDVFWLATLVQSIGELEFGQQ 819

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
            +IL LSSLLKRIDRLLQFDRLMPSYNGILT+SCIR+LTQIALK SA +PL+R+ +LIKP+
Sbjct: 820  TILLLSSLLKRIDRLLQFDRLMPSYNGILTVSCIRTLTQIALKFSALIPLDRIFDLIKPF 879

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R L +LW+VRVEASRALLDLEF   G++AAL +F  ++EEE SLRGQ KL +HAMRLCQ+
Sbjct: 880  RNLKSLWQVRVEASRALLDLEFQYKGLNAALSLFIEFLEEEPSLRGQTKLGMHAMRLCQM 939

Query: 1563 KCGSDVEIDIKS-STXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPRTVQ 1387
            +  +D   DI+S  T       LE R AF+NV LRH+LFCILQ+ +GR PTLYGVPR   
Sbjct: 940  RGATDSADDIQSIVTLLALLRMLEGRLAFNNVLLRHYLFCILQIFAGRSPTLYGVPRDKT 999

Query: 1386 L-TGEAETCSEQIKASAYFKLKMSIAPEPIVDAPNPVPDALPTPEAPREADAVSNGSERR 1210
              TG+ E C+EQ      F  +      P++   N  P+ +   E P+EAD VS+  ER+
Sbjct: 1000 FHTGDPEACNEQEIIVPCFTTEAKPLETPVI-ITNQSPEDVAIIEVPKEADTVSSSHERK 1058

Query: 1209 S-VVKIRVRQSAASSRADEAENVFVG-TSRGIQDETERGGSSSMSVDAPVRIPDEPMNVD 1036
              VVKI+V+ S A+S+ DE  N      S+G  +  +   SSS+SVDAP +   E +++ 
Sbjct: 1059 KPVVKIKVKHSTATSKGDETGNQSAAEKSQGRNNGPDHAASSSVSVDAPQKNFTEAVSIS 1118

Query: 1035 CQILEEVNSCHDHVSHVTASIGSAKIANIEDEARKELQCTADSSKVDCEQLHEDHSPATI 856
               LEEVNSC +  S VTASIGSAK+A   D+  KELQCTADS  +    +H       +
Sbjct: 1119 NHNLEEVNSCQNPGSRVTASIGSAKLAGEGDDMGKELQCTADSGNM---LVH-----PRL 1170

Query: 855  LNGNCVDPDAQKFASLRTISTGTYQCDAPPLATTGNPDLLXXXXXXXXXXXXXXXXXXXX 676
            L    +  DA K+ASL+++S  T    +  L      D                      
Sbjct: 1171 LGDTDLGADALKYASLQSLSAATVNDSSLALG-----DSPHRKEKKAKSDKDKKRRREDR 1225

Query: 675  XEHRNDPEYXXXXXXXXXXXXXXXXXXXQSEVAKVPPIEFPNTNVEPRVRSVLQSEDSNA 496
              H+ D EY                   Q E+AK+        N EP   S+     S  
Sbjct: 1226 KGHKEDSEY------LERKRLKKEKKRKQKELAKL-------LNCEPSKTSMELPSRSKD 1272

Query: 495  PFLERQIPNEESRFKSASLALKPNPNERSGSKLVIKTVESKGDPSEGSSVHKFRIKIKNR 316
            P +      +E  FKS ++  K   NE   S +++  VE++ +  E S+  KFRIKIK++
Sbjct: 1273 PGI------KEPEFKSVTVQAK--TNEVGSSNMLVTKVEARAETPEASTAPKFRIKIKSK 1324

Query: 315  SLNK 304
             LN+
Sbjct: 1325 PLNR 1328



 Score =  447 bits (1150), Expect(2) = 0.0
 Identities = 216/285 (75%), Positives = 243/285 (85%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFRH +NKVGNLERPFLKEFFPRWVGSCGCPVLRMG SYNKRKN++ELAVLR CTA
Sbjct: 480  LSTKEFRHFANKVGNLERPFLKEFFPRWVGSCGCPVLRMGFSYNKRKNMVELAVLRSCTA 539

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
              D+    P+ N E + RE +VGWPGMMSIRV ELDGMYDHPILPM+G+  QL+EIQCHS
Sbjct: 540  RPDA--EPPNTNAESEAREPEVGWPGMMSIRVNELDGMYDHPILPMAGDSWQLLEIQCHS 597

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXDLRANAESPLLWLRADPEMEYLTEIHFNQPIQM 2423
            KLAA+RF KPKKGS+            D R+++ESPLLW+RAD E+EY++EIHF+QP+QM
Sbjct: 598  KLAARRFLKPKKGSKADGSDDNGDAALDARSSSESPLLWIRADAEIEYISEIHFHQPVQM 657

Query: 2422 WINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAHTA 2243
            W+NQLEKDKDVVAQAQAIATL ALP+ SF +VNAL NFL DSKAFWRVRIEAAFALA TA
Sbjct: 658  WVNQLEKDKDVVAQAQAIATLAALPECSFAIVNALNNFLCDSKAFWRVRIEAAFALATTA 717

Query: 2242 SEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVM 2108
            SEDTDWAGLLHLVKFYKSRRFD N+GLP+PNDF D PEYFVLE +
Sbjct: 718  SEDTDWAGLLHLVKFYKSRRFDANIGLPKPNDFRDIPEYFVLEAI 762


>ref|XP_010037344.1| PREDICTED: transcription initiation factor TFIID subunit 2 isoform X2
            [Eucalyptus grandis] gi|629082604|gb|KCW49049.1|
            hypothetical protein EUGRSUZ_K02653 [Eucalyptus grandis]
          Length = 1327

 Score =  459 bits (1181), Expect(2) = 0.0
 Identities = 286/604 (47%), Positives = 366/604 (60%), Gaps = 4/604 (0%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHA+AMVR +D  SPREAVEFVLQLLKYNDNNGN YSDV+WLA +VQSIGELEFGQQ
Sbjct: 759  EAIPHAVAMVRGADGKSPREAVEFVLQLLKYNDNNGNIYSDVFWLATLVQSIGELEFGQQ 818

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
            +IL LSSLLKRIDRLLQFDRLMPSYNGILT+SCIR+LTQIALK SA +PL+R+ +LIKP+
Sbjct: 819  TILLLSSLLKRIDRLLQFDRLMPSYNGILTVSCIRTLTQIALKFSALIPLDRIFDLIKPF 878

Query: 1743 RELGTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQI 1564
            R L +LW+VRVEASRALLDLEF   G++AAL +F  ++EEE SLRGQ KL +HAMRLCQ+
Sbjct: 879  RNLKSLWQVRVEASRALLDLEFQYKGLNAALSLFIEFLEEEPSLRGQTKLGMHAMRLCQM 938

Query: 1563 KCGSDVEIDIKS-STXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPRTVQ 1387
            +  +D   DI+S  T       LE R AF+NV LRH+LFCILQ+ +GR PTLYGVPR   
Sbjct: 939  RGATDSADDIQSIVTLLALLRMLEGRLAFNNVLLRHYLFCILQIFAGRSPTLYGVPRDKT 998

Query: 1386 L-TGEAETCSEQIKASAYFKLKMSIAPEPIVDAPNPVPDALPTPEAPREADAVSNGSERR 1210
              TG+ E C+EQ      F  +      P++   N  P+ +   E P+EAD VS+  ER+
Sbjct: 999  FHTGDPEACNEQEIIVPCFTTEAKPLETPVI-ITNQSPEDVAIIEVPKEADTVSSSHERK 1057

Query: 1209 S-VVKIRVRQSAASSRADEAENVFVG-TSRGIQDETERGGSSSMSVDAPVRIPDEPMNVD 1036
              VVKI+V+ S A+S+ DE  N      S+G  +  +   SSS+SVDAP +   E +++ 
Sbjct: 1058 KPVVKIKVKHSTATSKGDETGNQSAAEKSQGRNNGPDHAASSSVSVDAPQKNFTEAVSIS 1117

Query: 1035 CQILEEVNSCHDHVSHVTASIGSAKIANIEDEARKELQCTADSSKVDCEQLHEDHSPATI 856
               LEEVNSC +  S VTASIGSAK+A   D+  KELQCTADS  +    +H       +
Sbjct: 1118 NHNLEEVNSCQNPGSRVTASIGSAKLAGEGDDMGKELQCTADSGNM---LVH-----PRL 1169

Query: 855  LNGNCVDPDAQKFASLRTISTGTYQCDAPPLATTGNPDLLXXXXXXXXXXXXXXXXXXXX 676
            L    +  DA K+ASL+++S  T    +  L      D                      
Sbjct: 1170 LGDTDLGADALKYASLQSLSAATVNDSSLALG-----DSPHRKEKKAKSDKDKKRRREDR 1224

Query: 675  XEHRNDPEYXXXXXXXXXXXXXXXXXXXQSEVAKVPPIEFPNTNVEPRVRSVLQSEDSNA 496
              H+ D EY                   Q E+AK+        N EP   S+     S  
Sbjct: 1225 KGHKEDSEY------LERKRLKKEKKRKQKELAKL-------LNCEPSKTSMELPSRSKD 1271

Query: 495  PFLERQIPNEESRFKSASLALKPNPNERSGSKLVIKTVESKGDPSEGSSVHKFRIKIKNR 316
            P +      +E  FKS ++  K   NE   S +++  VE++ +  E S+  KFRIKIK++
Sbjct: 1272 PGI------KEPEFKSVTVQAK--TNEVGSSNMLVTKVEARAETPEASTAPKFRIKIKSK 1323

Query: 315  SLNK 304
             LN+
Sbjct: 1324 PLNR 1327



 Score =  447 bits (1150), Expect(2) = 0.0
 Identities = 216/285 (75%), Positives = 243/285 (85%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFRH +NKVGNLERPFLKEFFPRWVGSCGCPVLRMG SYNKRKN++ELAVLR CTA
Sbjct: 479  LSTKEFRHFANKVGNLERPFLKEFFPRWVGSCGCPVLRMGFSYNKRKNMVELAVLRSCTA 538

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
              D+    P+ N E + RE +VGWPGMMSIRV ELDGMYDHPILPM+G+  QL+EIQCHS
Sbjct: 539  RPDA--EPPNTNAESEAREPEVGWPGMMSIRVNELDGMYDHPILPMAGDSWQLLEIQCHS 596

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXDLRANAESPLLWLRADPEMEYLTEIHFNQPIQM 2423
            KLAA+RF KPKKGS+            D R+++ESPLLW+RAD E+EY++EIHF+QP+QM
Sbjct: 597  KLAARRFLKPKKGSKADGSDDNGDAALDARSSSESPLLWIRADAEIEYISEIHFHQPVQM 656

Query: 2422 WINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAHTA 2243
            W+NQLEKDKDVVAQAQAIATL ALP+ SF +VNAL NFL DSKAFWRVRIEAAFALA TA
Sbjct: 657  WVNQLEKDKDVVAQAQAIATLAALPECSFAIVNALNNFLCDSKAFWRVRIEAAFALATTA 716

Query: 2242 SEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVM 2108
            SEDTDWAGLLHLVKFYKSRRFD N+GLP+PNDF D PEYFVLE +
Sbjct: 717  SEDTDWAGLLHLVKFYKSRRFDANIGLPKPNDFRDIPEYFVLEAI 761


>ref|XP_009391393.1| PREDICTED: transcription initiation factor TFIID subunit 2 isoform X2
            [Musa acuminata subsp. malaccensis]
          Length = 1330

 Score =  468 bits (1203), Expect(2) = 0.0
 Identities = 256/402 (63%), Positives = 309/402 (76%), Gaps = 3/402 (0%)
 Frame = -1

Query: 2103 EAIPHAIAMVRASDKHSPREAVEFVLQLLKYNDNNGNPYSDVYWLAAMVQSIGELEFGQQ 1924
            EAIPHA+A+VRASDK SPREA+EFVLQLLKYNDNNGNPYSDVYWLA++VQSIGELEFGQQ
Sbjct: 765  EAIPHAVALVRASDKKSPREAIEFVLQLLKYNDNNGNPYSDVYWLASLVQSIGELEFGQQ 824

Query: 1923 SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRSLTQIALKLSASVPLERVSELIKPY 1744
             ILFLSSLLKRID+L+QFD LMPSYNGILTISCIR+L Q+ALKLS SVPL++V ELI+PY
Sbjct: 825  GILFLSSLLKRIDQLMQFDSLMPSYNGILTISCIRTLAQMALKLSNSVPLDKVRELIEPY 884

Query: 1743 REL-GTLWKVRVEASRALLDLEFHCNGIDAALFMFTRYIEEETSLRGQVKLAVHAMRLCQ 1567
            R +  T WKVR+EASRALLDLEFH  GIDA L +F +++EEE SLRG+VKLAVH M +CQ
Sbjct: 885  RNVENTSWKVRIEASRALLDLEFHSKGIDAVLSLFMKFLEEECSLRGEVKLAVHVMHICQ 944

Query: 1566 IKCGSDVEIDIKSSTXXXXXXXLESRKAFSNVFLRHHLFCILQVLSGRPPTLYGVPRT-V 1390
                S+  + I   T       L SRKAF+NVFLRHHLFCILQ+L+GR PTLYG+ RT V
Sbjct: 945  ANLESESGMQIACPTLVSLLHLLTSRKAFNNVFLRHHLFCILQILAGRSPTLYGISRTQV 1004

Query: 1389 QLTGEAETCSEQIKASAYFKLKMSIAPEPIVDAPNPVPDALPTPEAPREADAVSNGSERR 1210
              +  AETC EQ+   A  KLK+    EP+ +    + +ALPT E  RE D VSN SERR
Sbjct: 1005 HASVAAETC-EQVTRPASLKLKIPKPQEPLAETVK-LSEALPTAETVREGDTVSNCSERR 1062

Query: 1209 -SVVKIRVRQSAASSRADEAENVFVGTSRGIQDETERGGSSSMSVDAPVRIPDEPMNVDC 1033
             +V+KIRV+Q ++SS+AD+A++  +  SRG  ++ E G  SS+SVDAP R   EP N+  
Sbjct: 1063 VNVIKIRVKQRSSSSKADDADHQ-MEYSRGGPNDAELGPCSSVSVDAPARGATEPFNISS 1121

Query: 1032 QILEEVNSCHDHVSHVTASIGSAKIANIEDEARKELQCTADS 907
            Q  EEV+S HD  S +TASIGSAK+A+ E++  KELQCTADS
Sbjct: 1122 QNNEEVSSSHDRESRMTASIGSAKLAS-EEKLGKELQCTADS 1162



 Score =  419 bits (1078), Expect(2) = 0.0
 Identities = 204/287 (71%), Positives = 232/287 (80%), Gaps = 2/287 (0%)
 Frame = -3

Query: 2962 LSTKEFRHLSNKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNLIELAVLRGCTA 2783
            LSTKEFRHL+NKVGNLERPFLKEFFPRWV SCGCP++RMGLSYNKR+N+IELAV+RGCTA
Sbjct: 486  LSTKEFRHLANKVGNLERPFLKEFFPRWVESCGCPIMRMGLSYNKRRNMIELAVVRGCTA 545

Query: 2782 TQDSGTSDPSGNPEMDPREGDVGWPGMMSIRVYELDGMYDHPILPMSGEDLQLIEIQCHS 2603
               S  +    N     REG  GWPGMMS+RV+ELDG+YDHP+LPM+GE  QL+EIQCHS
Sbjct: 546  KSSSAFNQDDEN-----REGHPGWPGMMSVRVHELDGVYDHPVLPMAGESCQLLEIQCHS 600

Query: 2602 KLAAKRFPKPKKGSRPXXXXXXXXXXXD--LRANAESPLLWLRADPEMEYLTEIHFNQPI 2429
            KLAAKR  KPKKGS+               +R+  +SPLLW+R DPEMEYL EIHF QP+
Sbjct: 601  KLAAKRIQKPKKGSKADGSDDNADVVSTQDMRSGVDSPLLWIRVDPEMEYLAEIHFYQPV 660

Query: 2428 QMWINQLEKDKDVVAQAQAIATLEALPQLSFTVVNALYNFLSDSKAFWRVRIEAAFALAH 2249
            QMWINQLEKDKDVVAQ+QAI+ LE LPQLSF VVNAL +FL+DSKAFWRVRIEAA+ALAH
Sbjct: 661  QMWINQLEKDKDVVAQSQAISMLEMLPQLSFAVVNALNSFLNDSKAFWRVRIEAAYALAH 720

Query: 2248 TASEDTDWAGLLHLVKFYKSRRFDENMGLPRPNDFHDFPEYFVLEVM 2108
            T SEDTD AGL HL+KFYKSRRFD + GLPR N FH+  EYFVLE +
Sbjct: 721  TTSEDTDLAGLFHLIKFYKSRRFDMDTGLPRANSFHEVSEYFVLEAI 767