BLASTX nr result
ID: Aconitum23_contig00001847
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00001847
(4790 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 2860 0.0
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su... 2859 0.0
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su... 2808 0.0
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su... 2806 0.0
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial... 2800 0.0
ref|XP_011099129.1| PREDICTED: DNA-directed RNA polymerase II su... 2794 0.0
ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II su... 2789 0.0
ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 2786 0.0
ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II su... 2781 0.0
ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II su... 2780 0.0
ref|XP_010029631.1| PREDICTED: DNA-directed RNA polymerase II su... 2779 0.0
ref|XP_006828844.1| PREDICTED: DNA-directed RNA polymerase II su... 2778 0.0
ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su... 2772 0.0
ref|XP_009344822.1| PREDICTED: DNA-directed RNA polymerase II su... 2768 0.0
ref|XP_009337078.1| PREDICTED: DNA-directed RNA polymerase II su... 2763 0.0
ref|XP_009363439.1| PREDICTED: DNA-directed RNA polymerase II su... 2763 0.0
ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prun... 2763 0.0
ref|XP_008337428.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 2762 0.0
gb|KMZ69245.1| DNA-directed RNA polymerase [Zostera marina] 2760 0.0
ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II su... 2759 0.0
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 2860 bits (7414), Expect = 0.0
Identities = 1420/1524 (93%), Positives = 1466/1524 (96%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSD RLGTIDRK KCETCTANM
Sbjct: 14 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTIDRKMKCETCTANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADE+D KFKQAQ+IRNPK+R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHKFKQAQKIRNPKNR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQDLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQR 4251
LKK+LDACKNK+KC+GGDEIE+Q D +EPVKKSRGGCGAQQPK+TI+GMKM+AEYK QR
Sbjct: 134 LKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTIEGMKMIAEYKIQR 193
Query: 4250 KKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXXX 4071
KKNDD EQLPEP ERKQQL+AERVL+VLKR++DEDC+LLGL+PKYARPDWMILQVL
Sbjct: 194 KKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYARPDWMILQVLPIPP 253
Query: 4070 XXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 3891
PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFH+ATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 313
Query: 3890 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 3711
FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+
Sbjct: 314 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDE 373
Query: 3710 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK 3531
LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK 433
Query: 3530 TSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 3351
+SDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 3350 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 3171
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 3170 IEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESET 2991
IEKDVFMNILMWWEDFDGKIPAP ILKPRPLWTGKQVFNLIIPKQINLLRTSAWH+ESET
Sbjct: 554 IEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESET 613
Query: 2990 GFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVNY 2811
GFITPGDTQVRIE+ GSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 2810 WLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESFE 2631
WLLQNGFSIGIGDTIADAATME INETISKAKNEVKELIRAAQE+ LE EPGRTMMESFE
Sbjct: 674 WLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQLEAEPGRTMMESFE 733
Query: 2630 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2451
NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2450 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2271
PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2270 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFNK 2091
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QKLDSLKMKK EF++
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKGEFDR 913
Query: 2090 LFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNSW 1911
+F YEI ENWNPSYMLPEHVEDLKTI EFRNVFDAEVQKLEADR+QLG+EIATTGDNSW
Sbjct: 914 VFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNSW 973
Query: 1910 PMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKNA 1731
PMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERL+VVPGDD +S+EAQKNA
Sbjct: 974 PMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLISMEAQKNA 1033
Query: 1730 TLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIGE 1551
TLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIE+RFLQSLVAPGEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 1550 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKTV 1371
PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V+KTKE+AK V
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKNV 1153
Query: 1370 QCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRIE 1191
QCALEYTTLRSVTQATEVWYDPDP +TIIEEDVDFV+SYYEMPD+EVAPEKISPWLLRIE
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEVAPEKISPWLLRIE 1213
Query: 1190 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDES 1011
LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKG++QDES
Sbjct: 1214 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELQDES 1273
Query: 1010 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVNL 831
AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFD EGFKPE EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKPEVEWMLDTEGVNL 1333
Query: 830 LAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 651
LAV+CHEDVDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 650 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 471
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDFLRGVTENIMLGQL 1453
Query: 470 APIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSPNYL 291
APIGTGDCALYLND MLQ AIELQLPSYME GLDFG+TPSRSPITGTPYHDGMMSPNYL
Sbjct: 1454 APIGTGDCALYLNDQMLQHAIELQLPSYME--GLDFGMTPSRSPITGTPYHDGMMSPNYL 1511
Query: 290 LSPNVRASPSTDAQFSPYVGGMAF 219
LSPN+R SP TDAQFSPYVGGMAF
Sbjct: 1512 LSPNLRLSPITDAQFSPYVGGMAF 1535
>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 2859 bits (7411), Expect = 0.0
Identities = 1422/1524 (93%), Positives = 1465/1524 (96%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KVR VQFGILSPD IRQMSVVQIEHSETTE+GKPKPGGLSDTRLGTIDRK KCETC ANM
Sbjct: 14 KVRRVQFGILSPDVIRQMSVVQIEHSETTEKGKPKPGGLSDTRLGTIDRKMKCETCMANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADE+D KFKQAQRIRNPK+R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHKFKQAQRIRNPKNR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQDLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQR 4251
LKKVLDACKNKTKC+GGDEIE QGQD EP+KK RGGCGAQQPK+TI+GMKM+AEYKAQR
Sbjct: 134 LKKVLDACKNKTKCEGGDEIEVQGQDTGEPIKKRRGGCGAQQPKLTIEGMKMIAEYKAQR 193
Query: 4250 KKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXXX 4071
KKNDD EQLPEP ERKQQL+AERVLSVLKR++DEDC+LLGL+P+YARPDWMILQVL
Sbjct: 194 KKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCILLGLNPEYARPDWMILQVLPIPP 253
Query: 4070 XXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 3891
PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 313
Query: 3890 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 3711
FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+
Sbjct: 314 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDE 373
Query: 3710 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK 3531
LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK 433
Query: 3530 TSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 3351
+SDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 3350 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 3171
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 3170 IEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESET 2991
IEKDVFMNILMWWEDFDGKIPAP ILKPRPLWTGKQVFNLIIPKQINL+RTSAWH+ESET
Sbjct: 554 IEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 613
Query: 2990 GFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVNY 2811
GFITPGDTQVRIER GSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 2810 WLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESFE 2631
WLLQNGFSIGIGDTIADAATME INETISKAKNEVKELIRAAQE+ LE EPGRTMMESFE
Sbjct: 674 WLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQLEAEPGRTMMESFE 733
Query: 2630 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2451
NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2450 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2271
PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2270 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFNK 2091
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QKLDSLKM+K EF+K
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMRKSEFDK 913
Query: 2090 LFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNSW 1911
+F YEI ENWNPSYMLPEHVEDLKTI EFRNVFDAEVQKLEADRYQLG+EIATTGDN+W
Sbjct: 914 VFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQLGTEIATTGDNNW 973
Query: 1910 PMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKNA 1731
PMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERL+VVPGDDFLS+EAQKNA
Sbjct: 974 PMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSMEAQKNA 1033
Query: 1730 TLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIGE 1551
TLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIE+RFLQSLVAPGEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 1550 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKTV 1371
PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKE+AK V
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKERAKNV 1153
Query: 1370 QCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRIE 1191
QCALEYTTLRSVTQATEVWYDPDP +TIIEEDVDFV+SYYEMPD+EVAPEKISPWLLRIE
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEVAPEKISPWLLRIE 1213
Query: 1190 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDES 1011
LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKG++QDES
Sbjct: 1214 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELQDES 1273
Query: 1010 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVNL 831
AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFD EGFKPE EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKPEVEWMLDTEGVNL 1333
Query: 830 LAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 651
LAV+CHEDVDA+RTTSNHLIEVIEVLGIEAVRR+LLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 650 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 471
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDCLRGVTENIMLGQL 1453
Query: 470 APIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSPNYL 291
APIGTGDCALYLND MLQQAIELQLPSYME GLDFG+TPSRSPI GTPY++GMMSP+YL
Sbjct: 1454 APIGTGDCALYLNDQMLQQAIELQLPSYME--GLDFGMTPSRSPIMGTPYNEGMMSPSYL 1511
Query: 290 LSPNVRASPSTDAQFSPYVGGMAF 219
LSPN R SP TDAQFSPYVGGMAF
Sbjct: 1512 LSPNARLSPITDAQFSPYVGGMAF 1535
>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 2808 bits (7280), Expect = 0.0
Identities = 1391/1525 (91%), Positives = 1454/1525 (95%), Gaps = 1/1525 (0%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KVR VQFGILSPDEIRQMSVVQIEH ET ERGKPKPGGLSD RLGTIDRK KCETC ANM
Sbjct: 14 KVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTIDRKMKCETCMANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADEDD++FKQA +IRNPKHR
Sbjct: 74 AECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTRFKQALKIRNPKHR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQ-DLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQ 4254
LK++ DACK K KC GGD+I+ Q Q D EEP+KKSRGGCGAQQP ITIDGMKM+AEYKA
Sbjct: 134 LKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNITIDGMKMIAEYKAP 193
Query: 4253 RKKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXX 4074
+KK+DD EQLPEP ERKQ L+AERVLSVLKR++DEDC+LLGLDPKYARPDWMILQVL
Sbjct: 194 KKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLDPKYARPDWMILQVLPIP 253
Query: 4073 XXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIAT 3894
PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII+EFAQLLQFHIAT
Sbjct: 254 PPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIAT 313
Query: 3893 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 3714
YFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 314 YFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 373
Query: 3713 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK 3534
+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK
Sbjct: 374 ELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK 433
Query: 3533 KTSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 3354
K+SDHHLELGYKVERHL+DGD+VLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 434 KSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 493
Query: 3353 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3174
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 494 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 553
Query: 3173 FIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESE 2994
FIEKDVFMNILMWWEDFDGKIPAP ILKPRPLWTGKQVFNLIIPKQINL+RTSAWH+E+E
Sbjct: 554 FIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLIRTSAWHSEAE 613
Query: 2993 TGFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVN 2814
TGFITPGDT VRIE+ GSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 614 TGFITPGDTLVRIEKGELLSGTLCKRTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 673
Query: 2813 YWLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESF 2634
YWLLQNGFSIGIGDTIADAATME INETISKAKN+VKELI+ AQEK LE EPGRTMMESF
Sbjct: 674 YWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQLEAEPGRTMMESF 733
Query: 2633 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2454
ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 734 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 793
Query: 2453 IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2274
IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 794 IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 853
Query: 2273 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFN 2094
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+
Sbjct: 854 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFD 913
Query: 2093 KLFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNS 1914
K F YEI +NWNPSYMLPEHVEDLKTI EFRNVFDAEVQKLEADRYQLG+EIATTGDN+
Sbjct: 914 KGFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQLGTEIATTGDNT 973
Query: 1913 WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKN 1734
WP+PVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERL+VVPGDDFLS+EAQKN
Sbjct: 974 WPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDFLSMEAQKN 1033
Query: 1733 ATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIG 1554
ATLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIE+RFLQSLVAPGEMIGC+AAQSIG
Sbjct: 1034 ATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCIAAQSIG 1093
Query: 1553 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKT 1374
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNK KE AK
Sbjct: 1094 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKKKELAKN 1153
Query: 1373 VQCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRI 1194
VQCALEYTTLRSVT ATE+WYDPDP +TIIEEDV+FV+SYYEMPD+++APEKISPWLLRI
Sbjct: 1154 VQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRI 1213
Query: 1193 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDE 1014
ELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNA+KLILRIRIMNDEAPKG++QDE
Sbjct: 1214 ELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRIMNDEAPKGELQDE 1273
Query: 1013 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVN 834
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVN+FD +EGFK + EWMLDTEGVN
Sbjct: 1274 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDDNEGFKADVEWMLDTEGVN 1333
Query: 833 LLAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 654
LLAV+CHEDVDA+RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1334 LLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1393
Query: 653 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQ 474
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD+LRGVTENIMLGQ
Sbjct: 1394 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQ 1453
Query: 473 LAPIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSPNY 294
LAPIGTGDCALYLND MLQQAIELQLPSYME GLDFG+TPSRSPI+GTPYH+GMMSP+Y
Sbjct: 1454 LAPIGTGDCALYLNDQMLQQAIELQLPSYME--GLDFGMTPSRSPISGTPYHEGMMSPSY 1511
Query: 293 LLSPNVRASPSTDAQFSPYVGGMAF 219
LLSPNVR+SP TDAQFSPYVGGMAF
Sbjct: 1512 LLSPNVRSSPITDAQFSPYVGGMAF 1536
>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 2806 bits (7273), Expect = 0.0
Identities = 1387/1525 (90%), Positives = 1454/1525 (95%), Gaps = 1/1525 (0%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KVR VQFGILSPDEIRQMSVVQIEHSET ERGKPKPGGLSD RLGTIDRK KCETC ANM
Sbjct: 14 KVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTIDRKMKCETCMANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADEDD++FKQA +IRNPKHR
Sbjct: 74 AECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDARFKQALKIRNPKHR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQ-DLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQ 4254
LK++ DACK K KC GGD+I+ Q Q D EEP+KKSRGGCGAQQP ITIDGMKM+AEYKA
Sbjct: 134 LKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNITIDGMKMIAEYKAP 193
Query: 4253 RKKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXX 4074
+KK+DD EQLPEP ERKQ L+AERVLSVLKR++DEDC+LLGL PKYARPDWMILQVL
Sbjct: 194 KKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLSPKYARPDWMILQVLPIP 253
Query: 4073 XXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIAT 3894
PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII+EFAQLLQFHIAT
Sbjct: 254 PPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIAT 313
Query: 3893 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 3714
YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 314 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 373
Query: 3713 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK 3534
+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK
Sbjct: 374 ELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK 433
Query: 3533 KTSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 3354
K+SDHHLELGYKVERHL+DGD+VLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 434 KSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 493
Query: 3353 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3174
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 494 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 553
Query: 3173 FIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESE 2994
FIEKDVFMNILMWWEDFDGKIPAP ILKPRPLWTGKQVFNLIIPKQINL+RTSAWH+E+E
Sbjct: 554 FIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLIRTSAWHSEAE 613
Query: 2993 TGFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVN 2814
TGFITPGDT VRIE+ GSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 614 TGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 673
Query: 2813 YWLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESF 2634
YWLLQNGFSIGIGDTIADAATME INETISKAKN+VKELI+ AQEK LE EPGRTMMESF
Sbjct: 674 YWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQLEAEPGRTMMESF 733
Query: 2633 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2454
ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 734 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 793
Query: 2453 IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2274
IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 794 IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 853
Query: 2273 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFN 2094
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK +F+
Sbjct: 854 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSDFD 913
Query: 2093 KLFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNS 1914
++F YEI +NWNPSYMLPEHVEDLKTI EFRNVFDAEVQKLEADRYQLG+EIATTGDN+
Sbjct: 914 RVFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQLGTEIATTGDNT 973
Query: 1913 WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKN 1734
WP+PVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERL+VVPGDDFLS+EAQKN
Sbjct: 974 WPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDFLSMEAQKN 1033
Query: 1733 ATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIG 1554
ATLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIE+RFLQSLVAPGEMIGC+AAQSIG
Sbjct: 1034 ATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCIAAQSIG 1093
Query: 1553 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKT 1374
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNK KE AK
Sbjct: 1094 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKKKELAKN 1153
Query: 1373 VQCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRI 1194
VQCALEYTTLRSVT ATE+WYDPDP +TIIEEDV+FV+SYYEMPD+++APEKISPWLLRI
Sbjct: 1154 VQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRI 1213
Query: 1193 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDE 1014
ELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNA+KLILRIRIMNDEAPKG++QDE
Sbjct: 1214 ELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRIMNDEAPKGELQDE 1273
Query: 1013 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVN 834
SAEDDVFLK+IESNMLTEMALRGIPDINKVFIKSGKVN+FD +EGFK + EWMLDTEGVN
Sbjct: 1274 SAEDDVFLKRIESNMLTEMALRGIPDINKVFIKSGKVNRFDENEGFKADVEWMLDTEGVN 1333
Query: 833 LLAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 654
LLAV+CHEDVDA+RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1334 LLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1393
Query: 653 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQ 474
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETDHLRGVTENIMLGQ
Sbjct: 1394 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDHLRGVTENIMLGQ 1453
Query: 473 LAPIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSPNY 294
LAPIGTGDCALYLND MLQQAIELQLPSYME GL+FG+TPSRSPI+GTPYH+GMMSP+Y
Sbjct: 1454 LAPIGTGDCALYLNDQMLQQAIELQLPSYME--GLEFGMTPSRSPISGTPYHEGMMSPSY 1511
Query: 293 LLSPNVRASPSTDAQFSPYVGGMAF 219
LLSPNVR+SP TDAQFSPYVGGM F
Sbjct: 1512 LLSPNVRSSPITDAQFSPYVGGMTF 1536
>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
Length = 1705
Score = 2800 bits (7258), Expect = 0.0
Identities = 1387/1525 (90%), Positives = 1451/1525 (95%), Gaps = 1/1525 (0%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KVR VQFGILSPDEIRQMSVVQIEHSET ERGKPKPGGLSD RLGTIDRK KCETC ANM
Sbjct: 14 KVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTIDRKMKCETCMANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADEDD++FKQA +IRNPKHR
Sbjct: 74 AECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDARFKQALKIRNPKHR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQ-DLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQ 4254
LK++ DACK K KC GGD+I+ Q Q D EEP+KKSRGGCGAQQP ITIDGMKM+AEYKA
Sbjct: 134 LKRIYDACKTKKKCAGGDDIDVQAQQDSEEPMKKSRGGCGAQQPNITIDGMKMIAEYKAP 193
Query: 4253 RKKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXX 4074
+KK+DD EQLPEP ERKQ L+AERVLSVLKR++DEDC+LLGL+PKYARPDWMILQVL
Sbjct: 194 KKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLNPKYARPDWMILQVLPIP 253
Query: 4073 XXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIAT 3894
PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII+EFAQLLQFHIAT
Sbjct: 254 LPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIAT 313
Query: 3893 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 3714
YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 314 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 373
Query: 3713 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK 3534
+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK
Sbjct: 374 ELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK 433
Query: 3533 KTSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 3354
K+SDHHLELGYKVERHL+DGD+VLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 434 KSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 493
Query: 3353 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3174
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 494 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 553
Query: 3173 FIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESE 2994
FIEKDVFMNILMWWEDFDGKIPAP ILKPRPLWTGKQVFNLIIPKQINL+RTSAWH+E+E
Sbjct: 554 FIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLIRTSAWHSEAE 613
Query: 2993 TGFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVN 2814
TGFITPGDT VRIE+ GSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 614 TGFITPGDTLVRIEKGXLLSGTLCKRTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 673
Query: 2813 YWLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESF 2634
YWLLQNGFSIGIGDTIADAATME INETISKAKN+VKELI+ AQEK LE EPGRTMMESF
Sbjct: 674 YWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQLEAEPGRTMMESF 733
Query: 2633 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2454
ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 734 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 793
Query: 2453 IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2274
IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 794 IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 853
Query: 2273 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFN 2094
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+
Sbjct: 854 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFD 913
Query: 2093 KLFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNS 1914
K F YEI +NWNPSYMLPEHVEDLKTI EFRNVFDAEVQKLEADRYQLG+EIATTGDN+
Sbjct: 914 KFFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQLGTEIATTGDNT 973
Query: 1913 WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKN 1734
WP+PVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERL+VVPGDDFLS+EAQKN
Sbjct: 974 WPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDFLSMEAQKN 1033
Query: 1733 ATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIG 1554
ATLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIE+RFLQSLVAPGEMIGC+AAQSIG
Sbjct: 1034 ATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCIAAQSIG 1093
Query: 1553 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKT 1374
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK EVNK KE AK
Sbjct: 1094 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKSEVNKKKELAKN 1153
Query: 1373 VQCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRI 1194
VQCALEYTTLRSVT ATE+WYDPDP +TIIEEDV+FV+SYYEMPD+++APEKISPWLLRI
Sbjct: 1154 VQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRI 1213
Query: 1193 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDE 1014
ELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNA+KLILRIRIMNDE PKG++QDE
Sbjct: 1214 ELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRIMNDEGPKGELQDE 1273
Query: 1013 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVN 834
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVN+FD ++GFK + EWMLDTEGVN
Sbjct: 1274 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDENDGFKADVEWMLDTEGVN 1333
Query: 833 LLAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 654
LLAV+CHEDVDA+RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1334 LLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1393
Query: 653 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQ 474
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVD LLDAAV+AETDHLRGVTENIMLGQ
Sbjct: 1394 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDXLLDAAVFAETDHLRGVTENIMLGQ 1453
Query: 473 LAPIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSPNY 294
LAPIGTGDCALYLND MLQ AIELQLPSYME GLDFG+TPSRSPI+GTPYH+GMMSP+Y
Sbjct: 1454 LAPIGTGDCALYLNDQMLQXAIELQLPSYME--GLDFGMTPSRSPISGTPYHEGMMSPSY 1511
Query: 293 LLSPNVRASPSTDAQFSPYVGGMAF 219
LLSPNVR+SP TDAQFSPYVGGM F
Sbjct: 1512 LLSPNVRSSPITDAQFSPYVGGMTF 1536
>ref|XP_011099129.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Sesamum indicum]
Length = 1848
Score = 2794 bits (7244), Expect = 0.0
Identities = 1377/1524 (90%), Positives = 1450/1524 (95%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
K+R+VQFGILSPDEIRQMSVV IEHSETTERGKPKPGGLSD RLGTIDRK KCETC ANM
Sbjct: 14 KIRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDPRLGTIDRKMKCETCMANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
A+CPGHFGHLELAKPMFHIGFMKTVLSI+RCVCFNCSKILADE+D KFKQA RIRNPK+R
Sbjct: 74 ADCPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEEDPKFKQALRIRNPKNR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQDLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQR 4251
LKK+LDACKNK+KC+GGDEI+ QGQD +EPVKK+RGGCGAQQPKI+IDGMKMVAEYK Q+
Sbjct: 134 LKKILDACKNKSKCEGGDEIDVQGQDTDEPVKKTRGGCGAQQPKISIDGMKMVAEYKIQK 193
Query: 4250 KKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXXX 4071
KKNDD EQ+PEP ERKQQL+AE+VLS+LKR+TDEDC LLGL+PKYARPDWMILQVL
Sbjct: 194 KKNDDPEQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLPIPP 253
Query: 4070 XXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 3891
PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQLLQFHIATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIATY 313
Query: 3890 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 3711
FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+
Sbjct: 314 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDE 373
Query: 3710 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK 3531
LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 3530 TSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 3351
+SD HLELGYKVERHL DGDFVLFNRQPSLHKMSIMGH+IKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHKIKIMPYSTFRLNLSVTSPYNA 493
Query: 3350 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 3171
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 3170 IEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESET 2991
IEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQINLLR SAWH ESE
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQESEK 613
Query: 2990 GFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVNY 2811
GFITPGDTQVRIE+ GSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 2810 WLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESFE 2631
WLLQN FSIGIGDTIADAATME INETIS AKNEVKELIRAAQEK LE EPGRTMMESFE
Sbjct: 674 WLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESFE 733
Query: 2630 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2451
NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2450 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2271
P+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2270 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFNK 2091
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+KK +FN
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKKADFND 913
Query: 2090 LFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNSW 1911
++ YEI + NWNP+YMLPE VEDLKTI E R+VFDAEVQKLEADRYQLG+EIATTGDNSW
Sbjct: 914 MYRYEIDNANWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQLGTEIATTGDNSW 973
Query: 1910 PMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKNA 1731
P+PVN++RL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERL+VV GDD+LS+EAQKNA
Sbjct: 974 PLPVNIRRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKNA 1033
Query: 1730 TLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIGE 1551
TLFFNILLRS ASKRVLKEYRLTREAF+WVIGEIE+RFLQSLVAPGEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 1550 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKTV 1371
PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V+KTKE+AK V
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKNV 1153
Query: 1370 QCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRIE 1191
QCALEYTTLRSVTQATEVWYDPDP +TIIEEDV+FV+SYYEMPD+E+ P+KISPWLLRIE
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIE 1213
Query: 1190 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDES 1011
LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKG++ DES
Sbjct: 1214 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 1273
Query: 1010 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVNL 831
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFD +EGFK ENEWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKAENEWMLDTEGVNL 1333
Query: 830 LAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 651
LAV+CHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 650 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 471
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 1453
Query: 470 APIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSPNYL 291
APIGTGDCALYLN+ ML+QAIE+ LPSYMEGGGL+FG+TP+RSP+TGTPYHDGMMSP+YL
Sbjct: 1454 APIGTGDCALYLNEEMLKQAIEIPLPSYMEGGGLEFGMTPARSPLTGTPYHDGMMSPSYL 1513
Query: 290 LSPNVRASPSTDAQFSPYVGGMAF 219
LSPN+R SP TDAQFSPYVGGMAF
Sbjct: 1514 LSPNLRLSPVTDAQFSPYVGGMAF 1537
>ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
guineensis]
Length = 1842
Score = 2789 bits (7230), Expect = 0.0
Identities = 1380/1525 (90%), Positives = 1446/1525 (94%), Gaps = 1/1525 (0%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KVR VQFGILSPDEIRQMSV QIEH ET ERGKPKPGGLSD RLGTIDRK KCETC ANM
Sbjct: 14 KVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTIDRKMKCETCMANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADEDD++FKQA +IRNPKHR
Sbjct: 74 AECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDARFKQALKIRNPKHR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQ-DLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQ 4254
LK++ DACK+K KC GGD+++ Q Q D EEP+KKSRGGCG+QQP ITIDGMKMVAEYKA
Sbjct: 134 LKRISDACKSKKKCAGGDDVDIQAQQDSEEPIKKSRGGCGSQQPTITIDGMKMVAEYKAP 193
Query: 4253 RKKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXX 4074
+KK+DD +QLPEP ERKQ L+A+RVLSVLKR++DEDC+LLGL+P+YARPDWMILQVL
Sbjct: 194 KKKSDDQDQLPEPVERKQILSADRVLSVLKRISDEDCILLGLNPQYARPDWMILQVLPIP 253
Query: 4073 XXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIAT 3894
PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII+EFAQLLQFHIAT
Sbjct: 254 PPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIAT 313
Query: 3893 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 3714
YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 314 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 373
Query: 3713 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK 3534
+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK
Sbjct: 374 ELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK 433
Query: 3533 KTSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 3354
K+SDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 434 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 493
Query: 3353 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3174
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 494 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 553
Query: 3173 FIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESE 2994
FIE DVFMNILMWWEDFDGKIPAP ILKPRPLWTGKQVFNLIIPKQINL+RTSAWH+E+E
Sbjct: 554 FIEMDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLIRTSAWHSEAE 613
Query: 2993 TGFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVN 2814
TGFITPGDT VRIE+ GSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 614 TGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 673
Query: 2813 YWLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESF 2634
YWLLQNGFS+GIGDTIADA TME INETISKAKN+VKELI+ AQEK LE EPGRTMMESF
Sbjct: 674 YWLLQNGFSMGIGDTIADAVTMEKINETISKAKNDVKELIKLAQEKQLEAEPGRTMMESF 733
Query: 2633 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2454
ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 734 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 793
Query: 2453 IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2274
IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 794 IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 853
Query: 2273 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFN 2094
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+
Sbjct: 854 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFD 913
Query: 2093 KLFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNS 1914
K+F YEI NWNPSYMLPEHVEDLKTI EF+NVFDAEVQKLEADRYQLG+EI TTGDN+
Sbjct: 914 KIFRYEIDDNNWNPSYMLPEHVEDLKTIREFKNVFDAEVQKLEADRYQLGTEIVTTGDNT 973
Query: 1913 WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKN 1734
WPMPVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERL+VVPGDDFLS+EAQKN
Sbjct: 974 WPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDFLSMEAQKN 1033
Query: 1733 ATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIG 1554
ATLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIE+RFLQSLVAPGEMIGCVAAQSIG
Sbjct: 1034 ATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1093
Query: 1553 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKT 1374
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNK KE AK
Sbjct: 1094 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKKKELAKN 1153
Query: 1373 VQCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRI 1194
VQ ALEYTTLRSVT ATEVWYDPDP +TIIEEDV+FV+SYYEMPD+++APEKISPWLLR+
Sbjct: 1154 VQTALEYTTLRSVTHATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRV 1213
Query: 1193 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDE 1014
ELNREMMVDKKLSMADIAEKIN EF D+TCIFNDDNA+KLILRIRIMNDEAPKGD+QDE
Sbjct: 1214 ELNREMMVDKKLSMADIAEKINHEFGSDITCIFNDDNADKLILRIRIMNDEAPKGDLQDE 1273
Query: 1013 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVN 834
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVN+FD EGFK + EWMLDTEGVN
Sbjct: 1274 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDETEGFKADVEWMLDTEGVN 1333
Query: 833 LLAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 654
LLAV+CHEDVDA+RTTSNHLIEVIEVLGIEAVRR+LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1334 LLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILC 1393
Query: 653 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQ 474
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVY+E DHLRGVTENIMLGQ
Sbjct: 1394 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYSEADHLRGVTENIMLGQ 1453
Query: 473 LAPIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSPNY 294
LAPIGTGDCALYLND MLQQAIELQLPSYME GLDFG+TPSRSPI+GTPYH+GMMSP+Y
Sbjct: 1454 LAPIGTGDCALYLNDQMLQQAIELQLPSYME--GLDFGMTPSRSPISGTPYHEGMMSPSY 1511
Query: 293 LLSPNVRASPSTDAQFSPYVGGMAF 219
LLSPNVR+SP TDAQFSPYVGGMAF
Sbjct: 1512 LLSPNVRSSPITDAQFSPYVGGMAF 1536
>ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit 1 [Cucumis melo]
Length = 1837
Score = 2786 bits (7223), Expect = 0.0
Identities = 1381/1524 (90%), Positives = 1442/1524 (94%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPK GLSD RLGTIDRK KCETCTANM
Sbjct: 14 KVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTIDRKMKCETCTANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGFMKTVL+IMR VCFNCSKIL DE+D KFKQA RI+NPK+R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPKFKQALRIKNPKNR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQDLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQR 4251
L+K+LDACKNKTKC+GGDEI+ QGQD ++PVKKSRGGCGAQQPKITI+GMKM AEYKAQR
Sbjct: 134 LRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKITIEGMKMTAEYKAQR 193
Query: 4250 KKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXXX 4071
KKNDD EQLPEP ERKQ LTAERVL +LKR+TD+DC LLGL+PKYARPDWMILQVL
Sbjct: 194 KKNDDQEQLPEPVERKQTLTAERVLGILKRITDDDCKLLGLNPKYARPDWMILQVLPIPP 253
Query: 4070 XXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 3891
PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIISEFAQLLQFHIATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATY 313
Query: 3890 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 3711
FDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+
Sbjct: 314 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDE 373
Query: 3710 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK 3531
LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 3530 TSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 3351
+SDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 3350 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 3171
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 3170 IEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESET 2991
I KDVFMNILMWWEDFDGKIPAP ILKP+PLWTGKQVFNLIIPKQINL RTSAWH+ESET
Sbjct: 554 ITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHSESET 613
Query: 2990 GFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVNY 2811
G +TPGDT VRIE+ GSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GHVTPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 2810 WLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESFE 2631
WLLQN FSIGIGDTIADAATME INETIS AKNEVK LI+ AQE+ LEPEPGRTMM+SFE
Sbjct: 674 WLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFE 733
Query: 2630 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2451
N+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2450 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2271
P+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2270 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFNK 2091
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF +
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFER 913
Query: 2090 LFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNSW 1911
+F YE ENW P+YMLPEHVEDLKTI EFRNVF+AEVQKLEADRYQLG+EIATTG+NSW
Sbjct: 914 IFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSW 973
Query: 1910 PMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKNA 1731
PMPVNLKRLI NAQKTFK+D RR SDMHPMEIVEA+DKLQERL+VVPG+D LSVEAQKNA
Sbjct: 974 PMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNA 1033
Query: 1730 TLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIGE 1551
TLFFNILLRSTFASKRVL EYRLTREAF+WVIGEIE+RFLQSLVAPGEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 1550 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKTV 1371
PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLKPE NKTKE+AKTV
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTV 1153
Query: 1370 QCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRIE 1191
QCALEYTTLRSVTQATEVWYDPDP +TIIEED+DFV+SYYEMPD+E+APEKISPWLLRIE
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIE 1213
Query: 1190 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDES 1011
LNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKG++ DES
Sbjct: 1214 LNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDES 1273
Query: 1010 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVNL 831
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFD +EGFKPE EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNL 1333
Query: 830 LAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 651
LAV+CHEDVDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 650 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 471
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 1453
Query: 470 APIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSPNYL 291
APIGTG CALYLND ML+ AIELQLPSY++ GLDFG+TPSRSPI+GTPYH+GMMSPNYL
Sbjct: 1454 APIGTGGCALYLNDEMLKNAIELQLPSYID--GLDFGMTPSRSPISGTPYHEGMMSPNYL 1511
Query: 290 LSPNVRASPSTDAQFSPYVGGMAF 219
LSPN+R SP +DAQFSPYVGGMAF
Sbjct: 1512 LSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Cucumis sativus]
gi|778674691|ref|XP_011650276.1| PREDICTED: DNA-directed
RNA polymerase II subunit 1 [Cucumis sativus]
gi|700200498|gb|KGN55631.1| hypothetical protein
Csa_3G002510 [Cucumis sativus]
Length = 1867
Score = 2781 bits (7208), Expect = 0.0
Identities = 1380/1524 (90%), Positives = 1440/1524 (94%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPK GLSD RLGTIDRK KCETCTANM
Sbjct: 14 KVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTIDRKMKCETCTANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGFMKTVL+IMR VCFNCSKIL DE+D KFKQA RI+NPK+R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPKFKQALRIKNPKNR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQDLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQR 4251
L+K+LDACKNKTKC+GGDEI+ QGQD ++PVKKSRGGCGAQQPKI+I+GMKM AEYKAQR
Sbjct: 134 LRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISIEGMKMTAEYKAQR 193
Query: 4250 KKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXXX 4071
KKNDD EQLPEP ERKQ LTAERVL +LKR+TDEDC LLGL+PKYARPDWMILQVL
Sbjct: 194 KKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPP 253
Query: 4070 XXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 3891
PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIISEFAQLLQFHIATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATY 313
Query: 3890 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 3711
FDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+
Sbjct: 314 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDE 373
Query: 3710 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK 3531
LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 3530 TSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 3351
+SDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 3350 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 3171
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 3170 IEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESET 2991
I KDVFMN LMWWEDFDGKIPAP ILKP+PLWTGKQVFNLIIPKQINL RTSAWH+ESET
Sbjct: 554 ITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHSESET 613
Query: 2990 GFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVNY 2811
G ITPGDT VRIE+ GSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 2810 WLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESFE 2631
WLLQN FSIGIGDTIADAATME INETIS AKNEVK LI+ AQE+ LEPEPGRTMM+SFE
Sbjct: 674 WLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFE 733
Query: 2630 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2451
N+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2450 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2271
P+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2270 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFNK 2091
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF +
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFER 913
Query: 2090 LFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNSW 1911
+F YE ENW P+YMLPEHVEDLKTI EFRNVF+AEVQKLEADRYQLG+EIATTG+NSW
Sbjct: 914 IFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSW 973
Query: 1910 PMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKNA 1731
PMPVNLKRLI NAQKTFK+D RR SDMHPMEIVEA+DKLQERL+VVPG+D LSVEAQKNA
Sbjct: 974 PMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNA 1033
Query: 1730 TLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIGE 1551
TLFFNILLRSTFASKRVL EYRLTREAF+WVIGEIE+RFLQSLVAPGEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 1550 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKTV 1371
PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLKPE NKTKE+AKTV
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTV 1153
Query: 1370 QCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRIE 1191
QCALEYTTLRSVTQATEVWYDPDP +TIIEED+DFV+SYYEMPD+E+APEKISPWLLRIE
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIE 1213
Query: 1190 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDES 1011
LNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKG++ DES
Sbjct: 1214 LNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDES 1273
Query: 1010 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVNL 831
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFD +EGFKPE EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNL 1333
Query: 830 LAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 651
LAV+ HEDVDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 650 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 471
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 1453
Query: 470 APIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSPNYL 291
APIGTG CALYLND ML+ AIELQLPSY++ GLDFG+TPSRSPI+GTPYH+GMMSPNYL
Sbjct: 1454 APIGTGGCALYLNDEMLKNAIELQLPSYID--GLDFGMTPSRSPISGTPYHEGMMSPNYL 1511
Query: 290 LSPNVRASPSTDAQFSPYVGGMAF 219
LSPN+R SP +DAQFSPYVGGMAF
Sbjct: 1512 LSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Musa acuminata
subsp. malaccensis]
Length = 1832
Score = 2780 bits (7206), Expect = 0.0
Identities = 1376/1530 (89%), Positives = 1448/1530 (94%), Gaps = 6/1530 (0%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KVR VQFGILSPDEIRQMSVVQIEH ET ERGKPKP GLSD RLGTIDRK KCETC ANM
Sbjct: 14 KVRTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPAGLSDPRLGTIDRKMKCETCMANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D++FKQA +IRNPK+R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDTRFKQALKIRNPKNR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQ-DLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQ 4254
LK++ DACK+K KC GGD+I+ QGQ D EEP+KKSRGGCGAQQP ITIDGMKMVAEYKA
Sbjct: 134 LKRIYDACKSKKKCSGGDDIDVQGQQDSEEPMKKSRGGCGAQQPNITIDGMKMVAEYKAP 193
Query: 4253 RKKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXX 4074
+KK+D+ EQLPEPAERKQ L+AERVLSVLKR++DEDC+LLGL+PKYARPDWMILQVL
Sbjct: 194 KKKSDEQEQLPEPAERKQILSAERVLSVLKRISDEDCLLLGLNPKYARPDWMILQVLPIP 253
Query: 4073 XXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIAT 3894
PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIAT
Sbjct: 254 PPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIAT 313
Query: 3893 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 3714
YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 314 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 373
Query: 3713 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK 3534
+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK
Sbjct: 374 ELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK 433
Query: 3533 KTSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 3354
K+SDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGH+IKIMPYSTFRLNLSVTSPYN
Sbjct: 434 KSSDHHLELGYKVERHLCDGDFVLFNRQPSLHKMSIMGHKIKIMPYSTFRLNLSVTSPYN 493
Query: 3353 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3174
ADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 494 ADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 553
Query: 3173 FIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESE 2994
FIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQINL+R SAWH+ESE
Sbjct: 554 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLIRFSAWHSESE 613
Query: 2993 TGFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVN 2814
TGFITPGDT VRIE+ GSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 614 TGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 673
Query: 2813 YWLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESF 2634
YWLLQN FSIGIGDTIADAATME INETISKAKN+VK+LI+ AQEK LE EPGRTMM+SF
Sbjct: 674 YWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQEKQLEAEPGRTMMDSF 733
Query: 2633 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2454
ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 734 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 793
Query: 2453 IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2274
IP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 794 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 853
Query: 2273 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFN 2094
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE QK DSLKMKK EF+
Sbjct: 854 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIEYQKFDSLKMKKGEFD 913
Query: 2093 KLFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNS 1914
+F YEI +NWNPSY+ PEHVEDLKTI EFRNVFDAEVQKLEADRYQLG+EIATTGD S
Sbjct: 914 SVFRYEIDDDNWNPSYLQPEHVEDLKTIREFRNVFDAEVQKLEADRYQLGTEIATTGDIS 973
Query: 1913 WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKN 1734
PMPVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERL+VVPGDDFLS+EAQKN
Sbjct: 974 IPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDFLSMEAQKN 1033
Query: 1733 ATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIG 1554
ATL FNILLRS+FASKRV+KEYRLTREAF+WVIGEIE+RFLQSLVAPGEMIGCVAAQSIG
Sbjct: 1034 ATLLFNILLRSSFASKRVMKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1093
Query: 1553 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKT 1374
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP VNK KE AK
Sbjct: 1094 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPGVNKKKELAKN 1153
Query: 1373 VQCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRI 1194
VQCALEYTTLRSVT ATE+WYDPDP +TIIEEDV+FV+SYYEMPD+++APEKISPWLLRI
Sbjct: 1154 VQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRI 1213
Query: 1193 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDE 1014
ELNREMMVDKKLSMADIAEKIN EFDDDLTCIFNDDNA+KLILRIRIMND+APKG++QDE
Sbjct: 1214 ELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRIMNDDAPKGELQDE 1273
Query: 1013 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVN 834
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGK+N+FD +EGFKP+ EWMLDTEGVN
Sbjct: 1274 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDENEGFKPDVEWMLDTEGVN 1333
Query: 833 LLAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 654
LLAV+CHED+DA+RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1334 LLAVMCHEDIDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1393
Query: 653 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQ 474
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE DHLRGVTENIMLGQ
Sbjct: 1394 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEGDHLRGVTENIMLGQ 1453
Query: 473 LAPIGTGDCALYLNDAMLQQAIELQLPSYMEG-----GGLDFGVTPSRSPITGTPYHDGM 309
LAPIGTGDCALYLND MLQQAIELQLPSYM+G GG DFG+TPSRSPI+GTPYH+GM
Sbjct: 1454 LAPIGTGDCALYLNDQMLQQAIELQLPSYMDGGFGGPGGFDFGMTPSRSPISGTPYHEGM 1513
Query: 308 MSPNYLLSPNVRASPSTDAQFSPYVGGMAF 219
MSP+YLLSPN+RASP TDAQFSPYVGGMAF
Sbjct: 1514 MSPSYLLSPNIRASPITDAQFSPYVGGMAF 1543
>ref|XP_010029631.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Eucalyptus
grandis] gi|629090320|gb|KCW56573.1| hypothetical protein
EUGRSUZ_I02304 [Eucalyptus grandis]
Length = 1852
Score = 2779 bits (7204), Expect = 0.0
Identities = 1367/1524 (89%), Positives = 1449/1524 (95%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KVR+VQFGILSPDEIRQMSVVQIEH ETTERGKPK GLSD RLGTIDRK KCETCTANM
Sbjct: 14 KVRLVQFGILSPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTIDRKLKCETCTANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKIL DEDD KFKQA RIRNPK+R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILTDEDDHKFKQALRIRNPKNR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQDLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQR 4251
LKK+LDACKNK+KCDGGD+++++GQ EEP KK+ GGCGAQQPK+TI+GMKM+AEYKAQR
Sbjct: 134 LKKILDACKNKSKCDGGDDVDTKGQGSEEPKKKNHGGCGAQQPKLTIEGMKMIAEYKAQR 193
Query: 4250 KKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXXX 4071
KKNDD +Q+PEP ERKQ L+AERVLSVLKR++DE C LLGL+PKYARPDWMILQVL
Sbjct: 194 KKNDDQDQIPEPVERKQTLSAERVLSVLKRISDEHCQLLGLNPKYARPDWMILQVLPIPP 253
Query: 4070 XXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 3891
PSVMMDTSSRSEDDLTHQLAMIIRHNENLR+QERNGAPAHIISEFAQLLQFHIATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRQQERNGAPAHIISEFAQLLQFHIATY 313
Query: 3890 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 3711
FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+
Sbjct: 314 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDE 373
Query: 3710 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK 3531
LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 3530 TSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 3351
+SDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 3350 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 3171
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 3170 IEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESET 2991
IEKDVFMN+LMWWEDFDGK+P P ILKPRPLWTGKQVFNLIIPKQINLLR SAWH+E+ET
Sbjct: 554 IEKDVFMNVLMWWEDFDGKVPTPAILKPRPLWTGKQVFNLIIPKQINLLRNSAWHSETET 613
Query: 2990 GFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVNY 2811
GFITPGDTQVRIE+ GSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 2810 WLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESFE 2631
WLLQNGFSIGIGDTIADAATME INETIS AK+EVK LI+ AQEK LEPEPGRTMMESFE
Sbjct: 674 WLLQNGFSIGIGDTIADAATMEKINETISSAKDEVKRLIKDAQEKKLEPEPGRTMMESFE 733
Query: 2630 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2451
N+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2450 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2271
P+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PFGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2270 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFNK 2091
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQKLDSLKMKK EF++
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKKTEFDR 913
Query: 2090 LFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNSW 1911
+F YEI ENWNP YMLPE+ EDL++I E R+VFDAEVQKLEADRYQLG+EIATTGDN+W
Sbjct: 914 VFRYEIDDENWNPDYMLPENAEDLRSIGELRDVFDAEVQKLEADRYQLGTEIATTGDNTW 973
Query: 1910 PMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKNA 1731
P+PVNLKRLIWNAQKTFK+DLRRPSD+HP+E+VEA+DKLQERL+VVPG+D LSVEAQKNA
Sbjct: 974 PLPVNLKRLIWNAQKTFKIDLRRPSDIHPVEVVEAIDKLQERLKVVPGEDPLSVEAQKNA 1033
Query: 1730 TLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIGE 1551
TLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIE+RFLQSLVAPGEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 1550 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKTV 1371
PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEV+KTKE AKTV
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVSKTKENAKTV 1153
Query: 1370 QCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRIE 1191
QCALEYTTLRSVTQATEVWYDPDPT+T IEED+DFV+SY EMPD+E++PEKISPWLLRIE
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPTSTRIEEDIDFVKSYIEMPDEEISPEKISPWLLRIE 1213
Query: 1190 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDES 1011
LNREMMVDKKLSMADIAEKINLEFDDDL CIFNDDNA+KLILRIRIMNDE PKG++ DES
Sbjct: 1214 LNREMMVDKKLSMADIAEKINLEFDDDLNCIFNDDNADKLILRIRIMNDEVPKGELNDES 1273
Query: 1010 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVNL 831
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK+GKVNKF+ ++GFKPE EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNGKVNKFNENDGFKPETEWMLDTEGVNL 1333
Query: 830 LAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 651
LAV+CHE VDA+RTTSNHLIE+IEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMCHEGVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 650 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 471
TMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+D+LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQL 1453
Query: 470 APIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSPNYL 291
APIGTGDCALYLND ML+ AIELQLPSYM+ GLDFG+TP+RSPI+GTPYH+GMMSP+YL
Sbjct: 1454 APIGTGDCALYLNDEMLKHAIELQLPSYMD--GLDFGMTPARSPISGTPYHEGMMSPSYL 1511
Query: 290 LSPNVRASPSTDAQFSPYVGGMAF 219
LSPN+R SP+TDAQFSPYVGGMAF
Sbjct: 1512 LSPNLRLSPTTDAQFSPYVGGMAF 1535
>ref|XP_006828844.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Amborella
trichopoda] gi|548833823|gb|ERM96260.1| hypothetical
protein AMTR_s00001p00152770 [Amborella trichopoda]
Length = 1844
Score = 2778 bits (7202), Expect = 0.0
Identities = 1384/1527 (90%), Positives = 1447/1527 (94%), Gaps = 3/1527 (0%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KVR+VQFGILSP+EIR MSVV+I+HSET ERGKPKP GLSD RLGTIDRK KC+TCTANM
Sbjct: 14 KVRVVQFGILSPEEIRNMSVVEIQHSETMERGKPKPSGLSDPRLGTIDRKMKCDTCTANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCS+ILADE+D +FKQA +IRNPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSRILADEEDHRFKQALKIRNPKTR 133
Query: 4430 LKKVLDACKNKTKCDGGDEI-ESQGQDLEEPVKKSR-GGCGAQQPKITIDGMKMVAEYKA 4257
LKKVLD CKNKTKC+GGD+I E Q QD EE VKK R GGCGAQQPKITI+GMKMVAEYK
Sbjct: 134 LKKVLDCCKNKTKCEGGDDIDEDQAQDSEEVVKKKRHGGCGAQQPKITIEGMKMVAEYKL 193
Query: 4256 QRKKNDDTEQ-LPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLX 4080
RKKND+ EQ LPEP ERKQQL AE+VL+VLKR+TDEDC LLGL+PKYARPDWMILQV+
Sbjct: 194 PRKKNDEQEQMLPEPVERKQQLAAEKVLNVLKRITDEDCQLLGLNPKYARPDWMILQVMP 253
Query: 4079 XXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHI 3900
PSVMMDTSSRSEDDLTHQLAM+IRHNENL+RQE+NGAPAHIISEFAQLLQFH+
Sbjct: 254 IPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQEKNGAPAHIISEFAQLLQFHV 313
Query: 3899 ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTIN 3720
ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTIN
Sbjct: 314 ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTIN 373
Query: 3719 IDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRY 3540
ID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRY
Sbjct: 374 IDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRY 433
Query: 3539 LKKTSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSP 3360
LKK+ DHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSP
Sbjct: 434 LKKSGDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSP 493
Query: 3359 YNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKR 3180
YNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKR
Sbjct: 494 YNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKR 553
Query: 3179 DTFIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAE 3000
DTFIEKDVFMNILMWWEDFDGKIPAP ILKPRPLWTGKQVFNLIIPKQINL+R SAWH+E
Sbjct: 554 DTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLIRYSAWHSE 613
Query: 2999 SETGFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWL 2820
SE+GFITPGDT VRIER GSLIHVIWEEVGPDAARKFLGHTQWL
Sbjct: 614 SESGFITPGDTCVRIERGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAARKFLGHTQWL 673
Query: 2819 VNYWLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMME 2640
VNYWLLQ FSIGIGDTIADAATME INETISKAKNEVKELI+AAQEK LE EPGRTMME
Sbjct: 674 VNYWLLQQAFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQEKQLEAEPGRTMME 733
Query: 2639 SFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEG 2460
SFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEG
Sbjct: 734 SFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEG 793
Query: 2459 KRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTS 2280
KRIP+GF DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTS
Sbjct: 794 KRIPFGFNDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTS 853
Query: 2279 ETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLE 2100
ETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMK+ E
Sbjct: 854 ETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRAE 913
Query: 2099 FNKLFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGD 1920
F ++ YEI ENW+PSYMLPEHVEDLKTI EF+NVFDAEVQKLEADR+QLG+EI TTGD
Sbjct: 914 FENVYKYEIDQENWSPSYMLPEHVEDLKTIREFQNVFDAEVQKLEADRHQLGTEITTTGD 973
Query: 1919 NSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQ 1740
NSWPMPVNLKRLIWNAQK FKVDLRRPSDMHPMEIVEAVDKLQERL+VVPGDD +S+EAQ
Sbjct: 974 NSWPMPVNLKRLIWNAQKMFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLMSIEAQ 1033
Query: 1739 KNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQS 1560
KNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIE+RFLQSLVAPGEMIGCVAAQS
Sbjct: 1034 KNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQS 1093
Query: 1559 IGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKA 1380
IGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK EVNKTKEKA
Sbjct: 1094 IGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKHEVNKTKEKA 1153
Query: 1379 KTVQCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLL 1200
K VQCALEYTTLRSVT+ATEVWYDPDP +TIIEEDVDFV+SYYEMPD+EVAPEKISPWLL
Sbjct: 1154 KNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVRSYYEMPDEEVAPEKISPWLL 1213
Query: 1199 RIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQ 1020
RIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKG++Q
Sbjct: 1214 RIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELQ 1273
Query: 1019 DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEG 840
DES+EDDVFLKKIESNMLTEMALRGIPDINKVFIKSGK+NKFD +EGFKPE EWMLDTEG
Sbjct: 1274 DESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDENEGFKPEIEWMLDTEG 1333
Query: 839 VNLLAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAI 660
VNLLAV+C+E+VDA+RTTSNHLIEVI+VLGIEAVRR+LLDELRVVISFDGSYVNYRHLAI
Sbjct: 1334 VNLLAVMCNEEVDATRTTSNHLIEVIQVLGIEAVRRALLDELRVVISFDGSYVNYRHLAI 1393
Query: 659 LCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIML 480
LCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE DHLRGVTENIML
Sbjct: 1394 LCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIML 1453
Query: 479 GQLAPIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSP 300
GQLAPIGTGDCALYLND MLQQAIELQLPSYME G+DFG+TPSRSP+TGTPYH+GMMSP
Sbjct: 1454 GQLAPIGTGDCALYLNDQMLQQAIELQLPSYME--GMDFGMTPSRSPMTGTPYHEGMMSP 1511
Query: 299 NYLLSPNVRASPSTDAQFSPYVGGMAF 219
YLLSPN+R+SP TDAQFSPYVGGMAF
Sbjct: 1512 -YLLSPNMRSSPITDAQFSPYVGGMAF 1537
>ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Fragaria vesca
subsp. vesca] gi|764511805|ref|XP_011461993.1| PREDICTED:
DNA-directed RNA polymerase II subunit 1 [Fragaria vesca
subsp. vesca]
Length = 1842
Score = 2772 bits (7186), Expect = 0.0
Identities = 1377/1524 (90%), Positives = 1432/1524 (93%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KVR VQFGILSPDEIRQMSVVQIEHSET GKPK GLSD RLGTIDRK KCETCTANM
Sbjct: 14 KVRRVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTIDRKMKCETCTANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL DEDD KFK A RI+NPK+R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHKFKTALRIKNPKNR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQDLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQR 4251
LKK+LDACKNKTKC+GGDEI+ Q D +EP+KKSRGGCGAQQPK+TIDGMKMVAEYKAQR
Sbjct: 134 LKKILDACKNKTKCEGGDEIDVQ--DTDEPLKKSRGGCGAQQPKLTIDGMKMVAEYKAQR 191
Query: 4250 KKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXXX 4071
KK+DD EQLPEP ERKQ LTAERVLSVLKR++DEDC LLGL+PKYARPDWMILQVL
Sbjct: 192 KKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPP 251
Query: 4070 XXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 3891
PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIISEFAQLLQFHIATY
Sbjct: 252 QPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATY 311
Query: 3890 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 3711
FDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INIDQ
Sbjct: 312 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQ 371
Query: 3710 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK 3531
LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 372 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 431
Query: 3530 TSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 3351
+SDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 432 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 491
Query: 3350 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 3171
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 492 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 551
Query: 3170 IEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESET 2991
IEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQINL RTSAWH+ESET
Sbjct: 552 IEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLQRTSAWHSESET 611
Query: 2990 GFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVNY 2811
G ITPGDT VRIE+ GSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 612 GNITPGDTHVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 671
Query: 2810 WLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESFE 2631
WLLQN FSIGIGDTIADAATME INETISKAKNEVKELI AQ K LEPEPGRTMM+SFE
Sbjct: 672 WLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKELISKAQSKSLEPEPGRTMMDSFE 731
Query: 2630 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2451
N+VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 732 NKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 791
Query: 2450 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2271
PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 792 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 851
Query: 2270 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFNK 2091
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+K
Sbjct: 852 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFDK 911
Query: 2090 LFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNSW 1911
F Y ENWNP YMLPEHVEDLKTI EFRNVFDAEV KLE DR QLG+EIA TGDNSW
Sbjct: 912 TFAYVFDDENWNPDYMLPEHVEDLKTIREFRNVFDAEVSKLETDRLQLGTEIAVTGDNSW 971
Query: 1910 PMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKNA 1731
P+PVNLKRLIWNAQKTFK+D RR SDMHPMEIVEA+DKLQERLRVVPGDD LSVEAQKNA
Sbjct: 972 PLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLRVVPGDDLLSVEAQKNA 1031
Query: 1730 TLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIGE 1551
TLFFNILLRSTFASKRVL+EYRLTREAF+WVIGEIE+RFLQSLVAPGEMIGCVAAQSIGE
Sbjct: 1032 TLFFNILLRSTFASKRVLEEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1091
Query: 1550 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKTV 1371
PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLKPE NKTKE+AK V
Sbjct: 1092 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKNV 1151
Query: 1370 QCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRIE 1191
QCALEYTTLRSVTQATEVWYDPDP +T+IEED+DFV+SYYEMPD+EV P+KISPWLLRIE
Sbjct: 1152 QCALEYTTLRSVTQATEVWYDPDPMSTLIEEDLDFVRSYYEMPDEEVNPDKISPWLLRIE 1211
Query: 1190 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDES 1011
LNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNAEKLILRIRIMN+E PKGD QDES
Sbjct: 1212 LNREMMVDKKLSMADIAEKINLEFDGDLTCIFNDDNAEKLILRIRIMNEETPKGDSQDES 1271
Query: 1010 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVNL 831
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFD++EGFK E EWMLDTEGVNL
Sbjct: 1272 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDQNEGFKAEQEWMLDTEGVNL 1331
Query: 830 LAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 651
LAV+CH+DVDA RTTSNHLIE+IEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1332 LAVLCHDDVDAKRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1391
Query: 650 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 471
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDA+V+AETDHLRGVTENIMLGQL
Sbjct: 1392 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDASVFAETDHLRGVTENIMLGQL 1451
Query: 470 APIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSPNYL 291
APIGTGDCALYLND ML+ AIELQLPSY++ GLDFG+TPSRSP++GTP+ DGMMSPNYL
Sbjct: 1452 APIGTGDCALYLNDEMLKNAIELQLPSYVD--GLDFGMTPSRSPVSGTPFRDGMMSPNYL 1509
Query: 290 LSPNVRASPSTDAQFSPYVGGMAF 219
LSPN+R SP +DAQFSPYVGGMAF
Sbjct: 1510 LSPNMRMSPISDAQFSPYVGGMAF 1533
>ref|XP_009344822.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Pyrus x
bretschneideri]
Length = 1820
Score = 2768 bits (7176), Expect = 0.0
Identities = 1371/1524 (89%), Positives = 1434/1524 (94%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KV+ VQFGILSPDEIRQMSVV+IEHSET GKPK GLSD RLGTIDRK KCETCTANM
Sbjct: 14 KVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTIDRKLKCETCTANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGFMK VLS+MRCVCFNCSKIL DEDD KFKQA RI+NPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKIVLSVMRCVCFNCSKILVDEDDHKFKQAMRIKNPKSR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQDLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQR 4251
LKK+LDACKNKTKC+GGDEI+ QGQD EEPVKKSRGGCGAQQPK++I+GMKM AEYKAQR
Sbjct: 134 LKKILDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSIEGMKMNAEYKAQR 193
Query: 4250 KKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXXX 4071
KKNDD EQLPEP ERKQ LTAERVLSVLKR++DED +LGL+PKYARPDWMILQVL
Sbjct: 194 KKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYARPDWMILQVLPIPP 253
Query: 4070 XXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 3891
PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNG+PAHIISEFAQLLQFHIATY
Sbjct: 254 QPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIISEFAQLLQFHIATY 313
Query: 3890 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 3711
FDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INIDQ
Sbjct: 314 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQ 373
Query: 3710 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK 3531
LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 3530 TSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 3351
+SDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 3350 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 3171
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 553
Query: 3170 IEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESET 2991
IEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQINL RTSAWH+ESE+
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLQRTSAWHSESES 613
Query: 2990 GFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVNY 2811
G ITPGDT VRIE+ GSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 2810 WLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESFE 2631
WLLQN FSIGIGDTIADAATME INETISKAKNEVK+LI AQ K LE EPGRTMM+SFE
Sbjct: 674 WLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQLEAEPGRTMMDSFE 733
Query: 2630 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2451
N+VNQVLN+ARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2450 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2271
PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2270 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFNK 2091
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF++
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKTEFDR 913
Query: 2090 LFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNSW 1911
FTYE+ ENWNP YML EHVEDLKTI EFRNVFDAEVQKLE DR QLG+EIA TGDNSW
Sbjct: 914 TFTYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQLGTEIAVTGDNSW 973
Query: 1910 PMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKNA 1731
P+PVNLKRLIWNAQKTFK+D RR SDMHPMEIVEA+DKLQERL+VVPGDD LSVEAQKNA
Sbjct: 974 PLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVPGDDQLSVEAQKNA 1033
Query: 1730 TLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIGE 1551
TLFFNILLRSTFASKRVL EYRLTREAF+WVIGEIE+RFLQSLVAPGEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 1550 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKTV 1371
PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLKPE NKTKE+AK V
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKNV 1153
Query: 1370 QCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRIE 1191
QCALEYTTLRSVTQATEVWYDPDPT+T+IEED+DFV++YYEMPD+EV P+KISPWLLRIE
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPTSTVIEEDIDFVKAYYEMPDEEVNPDKISPWLLRIE 1213
Query: 1190 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDES 1011
LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMN EAPKG+M DES
Sbjct: 1214 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNAEAPKGEMVDES 1273
Query: 1010 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVNL 831
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFD++EGFK E EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDQNEGFKAEQEWMLDTEGVNL 1333
Query: 830 LAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 651
LAV+CH+DVDA RTTSNHLIE++E+LGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 650 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 471
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD+LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDYLRGVTENIMLGQL 1453
Query: 470 APIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSPNYL 291
APIGTGDCALYLND ML+ AIELQLPSYM+ GLDFG+TPSRSP++GTPYH+GMMSPNYL
Sbjct: 1454 APIGTGDCALYLNDEMLKNAIELQLPSYMD--GLDFGMTPSRSPVSGTPYHEGMMSPNYL 1511
Query: 290 LSPNVRASPSTDAQFSPYVGGMAF 219
LSPN+R SP +DAQFSPYVGGMAF
Sbjct: 1512 LSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_009337078.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Pyrus x
bretschneideri]
Length = 1820
Score = 2763 bits (7161), Expect = 0.0
Identities = 1367/1524 (89%), Positives = 1434/1524 (94%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KV+ VQFGILSPDEIRQMSVV+IEHSET GKPK GLSD RLGTIDRK KCETCTANM
Sbjct: 14 KVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTIDRKLKCETCTANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGF+KTVLS+MRCVCFNCSKIL DEDD KFKQA RI+NPK+R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFIKTVLSVMRCVCFNCSKILVDEDDHKFKQAMRIKNPKNR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQDLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQR 4251
LKK+LDACKNK+KC+GGDEI+ QGQD EEPVKKSRGGCGAQQPK++I+GMKM AEYKAQR
Sbjct: 134 LKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSIEGMKMNAEYKAQR 193
Query: 4250 KKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXXX 4071
KKNDD EQLPEP ERKQ LTAERVLSVLKR++DED +LGL+PKYARPDWMILQVL
Sbjct: 194 KKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYARPDWMILQVLPIPP 253
Query: 4070 XXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 3891
PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNG+PAHIISEFAQLLQFHIATY
Sbjct: 254 QPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIISEFAQLLQFHIATY 313
Query: 3890 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 3711
FDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INIDQ
Sbjct: 314 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQ 373
Query: 3710 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK 3531
LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 3530 TSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 3351
+SDHHLELGYKVERHL DGDF+LFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFILFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 3350 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 3171
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 3170 IEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESET 2991
IEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQINL RTSAWH+ESE+
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLQRTSAWHSESES 613
Query: 2990 GFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVNY 2811
G ITPGDT VRIE+ GSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 2810 WLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESFE 2631
WLLQN FSIGIGDTIADAATME INETISKAKNEVK+LI AQ K LE EPGRTMM+SFE
Sbjct: 674 WLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQLEAEPGRTMMDSFE 733
Query: 2630 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2451
N+VNQVLN+ARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2450 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2271
PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2270 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFNK 2091
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+K
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKTEFDK 913
Query: 2090 LFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNSW 1911
FTYE+ E WNP YML EHVEDLKTI EFRNVFDAEVQKLE DR QLG+EIA TGDNSW
Sbjct: 914 TFTYELDDEYWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQLGTEIAVTGDNSW 973
Query: 1910 PMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKNA 1731
P+PVNLKRLIWNAQKTFK+D RR SDMHPMEIVEA+DKLQERL+VVPGDD LSVEAQKNA
Sbjct: 974 PLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVPGDDLLSVEAQKNA 1033
Query: 1730 TLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIGE 1551
TLFFNILLRSTFASKRVL EYRLTREAF+WVIGEIE+RFLQSLVAPGEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 1550 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKTV 1371
PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLKPE NKTKE+AK V
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKNV 1153
Query: 1370 QCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRIE 1191
QCALEYTTLRSVTQATEVWYDP+PT+TII+ED+DFV++YYEMPD+EV P+KISPWLLRIE
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPEPTSTIIDEDIDFVRAYYEMPDEEVNPDKISPWLLRIE 1213
Query: 1190 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDES 1011
LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMN EAPKG+M DES
Sbjct: 1214 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNAEAPKGEMVDES 1273
Query: 1010 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVNL 831
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFD +EGFK E EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKAEQEWMLDTEGVNL 1333
Query: 830 LAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 651
LAV+CH+DVDA RTTSNHLIE++E+LGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 650 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 471
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD+LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDYLRGVTENIMLGQL 1453
Query: 470 APIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSPNYL 291
APIGTGDCALYLND ML+ AIELQLPSYM+ GLDFG+TPSRSP++GTPYH+GMMSPNYL
Sbjct: 1454 APIGTGDCALYLNDEMLKNAIELQLPSYMD--GLDFGMTPSRSPVSGTPYHEGMMSPNYL 1511
Query: 290 LSPNVRASPSTDAQFSPYVGGMAF 219
LSPN+R SP +DAQFSPYVGGMAF
Sbjct: 1512 LSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_009363439.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Pyrus x
bretschneideri]
Length = 1820
Score = 2763 bits (7161), Expect = 0.0
Identities = 1367/1524 (89%), Positives = 1434/1524 (94%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KV+ VQFGILSPDEIRQMSVV+IEHSET GKPK GLSD RLGTIDRK KCETCTANM
Sbjct: 14 KVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTIDRKLKCETCTANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGF+KTVLS+MRCVCFNCSKIL DEDD KFKQA RI+NPK+R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFIKTVLSVMRCVCFNCSKILVDEDDHKFKQAMRIKNPKNR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQDLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQR 4251
LKK+LDACKNK+KC+GGDEI+ QGQD EEPVKKSRGGCGAQQPK++I+GMKM AEYKAQR
Sbjct: 134 LKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSIEGMKMNAEYKAQR 193
Query: 4250 KKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXXX 4071
KKNDD EQLPEP ERKQ LTAERVLSVLKR++DED +LGL+PKYARPDWMILQVL
Sbjct: 194 KKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYARPDWMILQVLPIPP 253
Query: 4070 XXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 3891
PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNG+PAHIISEFAQLLQFHIATY
Sbjct: 254 QPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIISEFAQLLQFHIATY 313
Query: 3890 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 3711
FDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INIDQ
Sbjct: 314 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQ 373
Query: 3710 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK 3531
LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 3530 TSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 3351
+SDHHLELGYKVERHL DGDF+LFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFILFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 3350 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 3171
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 3170 IEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESET 2991
IEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQINL RTSAWH+ESE+
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLQRTSAWHSESES 613
Query: 2990 GFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVNY 2811
G ITPGDT VRIE+ GSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 2810 WLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESFE 2631
WLLQN FSIGIGDTIADAATME INETISKAKNEVK+LI AQ K LE EPGRTMM+SFE
Sbjct: 674 WLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQLEAEPGRTMMDSFE 733
Query: 2630 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2451
N+VNQVLN+ARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2450 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2271
PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2270 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFNK 2091
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+K
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKTEFDK 913
Query: 2090 LFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNSW 1911
FTYE+ E WNP YML EHVEDLKTI EFRNVFDAEVQKLE DR QLG+EIA TGDNSW
Sbjct: 914 TFTYELDDEYWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQLGTEIAVTGDNSW 973
Query: 1910 PMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKNA 1731
P+PVNLKRLIWNAQKTFK+D RR SDMHPMEIVEA+DKLQERL+VVPGDD LSVEAQKNA
Sbjct: 974 PLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVPGDDLLSVEAQKNA 1033
Query: 1730 TLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIGE 1551
TLFFNILLRSTFASKRVL EYRLTREAF+WVIGEIE+RFLQSLVAPGEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 1550 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKTV 1371
PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLKPE NKTKE+AK V
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKNV 1153
Query: 1370 QCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRIE 1191
QCALEYTTLRSVTQATEVWYDP+PT+TII+ED+DFV++YYEMPD+EV P+KISPWLLRIE
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPEPTSTIIDEDIDFVRAYYEMPDEEVNPDKISPWLLRIE 1213
Query: 1190 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDES 1011
LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMN EAPKG+M DES
Sbjct: 1214 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNAEAPKGEMVDES 1273
Query: 1010 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVNL 831
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFD +EGFK E EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKAEQEWMLDTEGVNL 1333
Query: 830 LAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 651
LAV+CH+DVDA RTTSNHLIE++E+LGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 650 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 471
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD+LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDYLRGVTENIMLGQL 1453
Query: 470 APIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSPNYL 291
APIGTGDCALYLND ML+ AIELQLPSYM+ GLDFG+TPSRSP++GTPYH+GMMSPNYL
Sbjct: 1454 APIGTGDCALYLNDEMLKNAIELQLPSYMD--GLDFGMTPSRSPVSGTPYHEGMMSPNYL 1511
Query: 290 LSPNVRASPSTDAQFSPYVGGMAF 219
LSPN+R SP +DAQFSPYVGGMAF
Sbjct: 1512 LSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica]
gi|462398589|gb|EMJ04257.1| hypothetical protein
PRUPE_ppa000093mg [Prunus persica]
Length = 1844
Score = 2763 bits (7161), Expect = 0.0
Identities = 1373/1524 (90%), Positives = 1433/1524 (94%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KVR VQFGILSPDEIRQMSVVQIEHSET GKPK GLSD RLGTIDRK KCETCTANM
Sbjct: 14 KVRCVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTIDRKMKCETCTANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL DEDD KFKQA RI++PK+R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHKFKQALRIKSPKNR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQDLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQR 4251
LKK+LDACKNKTKCDGGDEI+ QGQ+ EEPVKKSRGGCGAQQPK++I+GMKM AEYKAQR
Sbjct: 134 LKKILDACKNKTKCDGGDEIDVQGQESEEPVKKSRGGCGAQQPKLSIEGMKMNAEYKAQR 193
Query: 4250 KKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXXX 4071
KK+DD EQLPEP ERKQ LTAERVLSVLKR++DED LLGL+PKYARPDWMILQVL
Sbjct: 194 KKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQLLGLNPKYARPDWMILQVLPIPP 253
Query: 4070 XXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 3891
PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIISEFAQLLQFHIATY
Sbjct: 254 QPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATY 313
Query: 3890 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 3711
FDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INIDQ
Sbjct: 314 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQ 373
Query: 3710 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK 3531
LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 3530 TSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 3351
+SDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 3350 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 3171
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 3170 IEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESET 2991
IEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQINL RTSAWH+E+E+
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLQRTSAWHSEAES 613
Query: 2990 GFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVNY 2811
G ITPGDT VRIE+ GSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GNITPGDTFVRIEKGELLAGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 2810 WLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESFE 2631
WLLQN FSIGIGDTIADAATME INETISKAKNEVK+LI AQ K LE EPGRTMM+SFE
Sbjct: 674 WLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQLEAEPGRTMMDSFE 733
Query: 2630 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2451
N+VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2450 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2271
PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2270 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFNK 2091
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+K
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDK 913
Query: 2090 LFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNSW 1911
F+YE+ ENWNP YML EHVEDLKTI EFRNVFDAEVQKLE DR QLG+EIA TGDNSW
Sbjct: 914 TFSYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQLGTEIAVTGDNSW 973
Query: 1910 PMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKNA 1731
P+PVNLKRLIWNAQKTFK+D RR SDMHPMEIVEA+DKLQERL+VVPGDD LSVEAQKNA
Sbjct: 974 PLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVPGDDLLSVEAQKNA 1033
Query: 1730 TLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIGE 1551
TLFF+ILLRSTFASKRVL EYRLTREAF+WVIGEIE+RFLQSLVAPGEMIGCVAAQSIGE
Sbjct: 1034 TLFFSILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 1550 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKTV 1371
PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLKPE NKTKE+AK V
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKNV 1153
Query: 1370 QCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRIE 1191
QCALEYTTLRSVTQATEVWYDPDP +TIIEEDVDFV SYYEMPD+EV P+KISPWLLRIE
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVNSYYEMPDEEVNPDKISPWLLRIE 1213
Query: 1190 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDES 1011
LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMN EAPKG++ DES
Sbjct: 1214 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNAEAPKGELVDES 1273
Query: 1010 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVNL 831
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFD +EGFK E EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKAEQEWMLDTEGVNL 1333
Query: 830 LAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 651
LAV+CH+DVDA RTTSNHLIE++E+LGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 650 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 471
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD+LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDYLRGVTENIMLGQL 1453
Query: 470 APIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSPNYL 291
APIGTGDCALYLND ML+ AIELQLPSYM+ GLDFG+TPSRSP++GTPYH+GMMSPNYL
Sbjct: 1454 APIGTGDCALYLNDEMLKNAIELQLPSYMD--GLDFGMTPSRSPVSGTPYHEGMMSPNYL 1511
Query: 290 LSPNVRASPSTDAQFSPYVGGMAF 219
LSPN+R SP +DAQFSPYVGGMAF
Sbjct: 1512 LSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_008337428.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit 1-like [Malus domestica]
Length = 1763
Score = 2762 bits (7160), Expect = 0.0
Identities = 1369/1524 (89%), Positives = 1431/1524 (93%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KV+ VQFGILSPDEIRQMSVV+IEHSET GKPK GLSD RLGTIDRK KCETCTANM
Sbjct: 14 KVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTIDRKLKCETCTANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGFMK VLS+MRCVCFNCSKIL DEDD KFKQA RI+NPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKIVLSVMRCVCFNCSKILVDEDDHKFKQAMRIKNPKSR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQDLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQR 4251
LKK+LDACKNKTKC+GGDEI+ QGQD EEPVKKSRGGCGAQQPK++I+GMKM AEYKAQR
Sbjct: 134 LKKILDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSIEGMKMNAEYKAQR 193
Query: 4250 KKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXXX 4071
KKNDD EQLPEP ERKQ LTAERVLSVLKR++DED +LGL+PKYARPDWMILQVL
Sbjct: 194 KKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYARPDWMILQVLPIPP 253
Query: 4070 XXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 3891
PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNG+PAHIISEFAQLLQFHIATY
Sbjct: 254 QPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIISEFAQLLQFHIATY 313
Query: 3890 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 3711
FDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INIDQ
Sbjct: 314 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQ 373
Query: 3710 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK 3531
LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 3530 TSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 3351
+SDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 3350 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 3171
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 553
Query: 3170 IEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESET 2991
IEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQINL RTSAWH+ESE+
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLQRTSAWHSESES 613
Query: 2990 GFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVNY 2811
G ITPGDT VRIE+ GSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 2810 WLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESFE 2631
WLLQN FSIGIGDTIADAATME INETISKAKNEVK+LI AQ K LE EPGRTMM+SFE
Sbjct: 674 WLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQLEAEPGRTMMDSFE 733
Query: 2630 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2451
N+VNQVLN+ARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2450 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2271
PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2270 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFNK 2091
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKTEFDX 913
Query: 2090 LFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNSW 1911
FTYE+ E WNP YML EHVEDLKTI EFRNVFDAEVQKLE DR QLG+EIA TGDNSW
Sbjct: 914 TFTYELDDEXWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQLGTEIAVTGDNSW 973
Query: 1910 PMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKNA 1731
P+PVNLKRLIWNAQKTFK+D RR SDMHPMEIVEA+DKLQERL+VVPGDD LSVEAQKNA
Sbjct: 974 PLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVPGDDXLSVEAQKNA 1033
Query: 1730 TLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIGE 1551
TLFFNILLRSTFASKRVL EYRLTREAF+WVIGEIE+RFLQSLVAPGEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 1550 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKTV 1371
PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK E NKTKE+AK V
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKXEANKTKERAKNV 1153
Query: 1370 QCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRIE 1191
QCALEYTTLRSVTQATEVWYDPDPT+T+IEED+DFV++YYEMPD+EV P+KISPWLLRIE
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPTSTVIEEDIDFVKAYYEMPDEEVNPDKISPWLLRIE 1213
Query: 1190 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDES 1011
LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMN EAPKG+M DES
Sbjct: 1214 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNAEAPKGEMVDES 1273
Query: 1010 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVNL 831
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFD++EGFK E EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDQNEGFKAEQEWMLDTEGVNL 1333
Query: 830 LAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 651
LAV+CH+DVDA RTTSNHLIE++E+LGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 650 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 471
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD+LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDYLRGVTENIMLGQL 1453
Query: 470 APIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSPNYL 291
APIGTGDCALYLND ML+ AIELQLPSYM+ GLDFG+TPSRSP++GTPYH+GMMSPNYL
Sbjct: 1454 APIGTGDCALYLNDEMLKNAIELQLPSYMD--GLDFGMTPSRSPVSGTPYHEGMMSPNYL 1511
Query: 290 LSPNVRASPSTDAQFSPYVGGMAF 219
LSPN+R SP +DAQFSPYVGGMAF
Sbjct: 1512 LSPNLRLSPISDAQFSPYVGGMAF 1535
>gb|KMZ69245.1| DNA-directed RNA polymerase [Zostera marina]
Length = 1841
Score = 2760 bits (7154), Expect = 0.0
Identities = 1374/1526 (90%), Positives = 1435/1526 (94%), Gaps = 2/1526 (0%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KV+MVQFGI+ PDEIRQMSVV IEH ET ERGKPKP GLSD LGTIDRK KCETC ANM
Sbjct: 14 KVQMVQFGIIGPDEIRQMSVVLIEHGETMERGKPKPAGLSDPLLGTIDRKLKCETCMANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADEDD++FKQA +IRNPKHR
Sbjct: 74 AECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTRFKQALKIRNPKHR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQ-DLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQ 4254
LK++ DACK+K C GD+I+ Q Q D EEPVKKSR GCGAQQP ITIDGMKMVAEYKAQ
Sbjct: 134 LKRIYDACKSKKTCAVGDDIDVQDQGDSEEPVKKSRTGCGAQQPNITIDGMKMVAEYKAQ 193
Query: 4253 RKKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXX 4074
+KKNDD +QLPEP ERKQ L+AE+VLSVLKR++D+DC+LLGLDPKYARPDWMILQVL
Sbjct: 194 KKKNDDQDQLPEPVERKQVLSAEKVLSVLKRISDDDCLLLGLDPKYARPDWMILQVLPIP 253
Query: 4073 XXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIAT 3894
PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIAT
Sbjct: 254 PPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIAT 313
Query: 3893 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 3714
YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 314 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 373
Query: 3713 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK 3534
+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK
Sbjct: 374 ELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK 433
Query: 3533 KTSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 3354
K+SDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVT+PYN
Sbjct: 434 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTAPYN 493
Query: 3353 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3174
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT
Sbjct: 494 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 553
Query: 3173 FIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESE 2994
FIEKDVFMNILMWWEDFDGKIPAP ILKPRPLWTGKQVFNLIIPKQINL+R SAWH+ESE
Sbjct: 554 FIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLIRYSAWHSESE 613
Query: 2993 TGFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVN 2814
+GFITPGDTQVRIER GSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 614 SGFITPGDTQVRIERGEILSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 673
Query: 2813 YWLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESF 2634
YWLLQ GFSIGIGDTIADA TME INETIS AKN VK+LI+ AQEK LE EPGRTM ESF
Sbjct: 674 YWLLQQGFSIGIGDTIADAGTMEKINETISNAKNAVKDLIKQAQEKQLEAEPGRTMTESF 733
Query: 2633 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2454
ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 734 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 793
Query: 2453 IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2274
IPYGF DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 794 IPYGFTDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 853
Query: 2273 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFN 2094
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EFN
Sbjct: 854 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKAEFN 913
Query: 2093 KLFTYEIGHENWNPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNS 1914
++ YEI +NWNP YM EHVEDLK IPEFRNVFDAEVQKLEADRYQLG+EI TTGDNS
Sbjct: 914 NVYRYEIYDDNWNPGYMQSEHVEDLKNIPEFRNVFDAEVQKLEADRYQLGTEITTTGDNS 973
Query: 1913 WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKN 1734
WPMPVNL+RL+WNAQKTF VD RRPSDMHPMEIVEAVDKLQERL+VVPGDD +S+EAQKN
Sbjct: 974 WPMPVNLRRLVWNAQKTFNVDFRRPSDMHPMEIVEAVDKLQERLKVVPGDDLMSMEAQKN 1033
Query: 1733 ATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIG 1554
ATLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIE+RFLQSLVAPGEMIGCVAAQSIG
Sbjct: 1034 ATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1093
Query: 1553 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKT 1374
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP VNKTKEKAK
Sbjct: 1094 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPGVNKTKEKAKN 1153
Query: 1373 VQCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRI 1194
VQCALEYTTLRSVT+ATEVWYDPDPT+T+IEEDV+FV+SYYEMPD+EVAPEKISPWLLRI
Sbjct: 1154 VQCALEYTTLRSVTEATEVWYDPDPTSTLIEEDVEFVKSYYEMPDEEVAPEKISPWLLRI 1213
Query: 1193 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDE 1014
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMND+APKG++QDE
Sbjct: 1214 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDDAPKGELQDE 1273
Query: 1013 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVN 834
+AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGK+NKFD EGFKP+ EWMLDTEGVN
Sbjct: 1274 AAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDELEGFKPDVEWMLDTEGVN 1333
Query: 833 LLAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 654
LLAV+CH+DVDA+RTTSNHLIEVIEV+GIEAVR+SLLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1334 LLAVMCHDDVDATRTTSNHLIEVIEVIGIEAVRKSLLDELRVVISFDGSYVNYRHLAILC 1393
Query: 653 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQ 474
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D+LRGVTENIMLGQ
Sbjct: 1394 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKDYLRGVTENIMLGQ 1453
Query: 473 LAPIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYH-DGMMSPN 297
LAPIGTG CALYLND MLQQAIELQLPSYME GLDFG+TPS SPI +P H DGMMSPN
Sbjct: 1454 LAPIGTGSCALYLNDQMLQQAIELQLPSYME--GLDFGMTPSHSPI--SPGHLDGMMSPN 1509
Query: 296 YLLSPNVRASPSTDAQFSPYVGGMAF 219
YLLSPN+R+SP TDAQFSPYVGGMAF
Sbjct: 1510 YLLSPNIRSSPITDAQFSPYVGGMAF 1535
>ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X2
[Gossypium raimondii]
Length = 1832
Score = 2759 bits (7151), Expect = 0.0
Identities = 1367/1525 (89%), Positives = 1441/1525 (94%), Gaps = 1/1525 (0%)
Frame = -1
Query: 4790 KVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTIDRKQKCETCTANM 4611
KVR+VQFGILSPDEIRQMSVVQIEHSETTERGKPK GGLSD RLGTIDRK KCETCTANM
Sbjct: 14 KVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTIDRKLKCETCTANM 73
Query: 4610 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDSKFKQAQRIRNPKHR 4431
AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADE+D KFKQA +I+NPK+R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHKFKQALKIKNPKNR 133
Query: 4430 LKKVLDACKNKTKCDGGDEIESQGQDLEEPVKKSRGGCGAQQPKITIDGMKMVAEYKAQR 4251
LKK+LDACKNKTKC+GGDEI+ QGQD EEPVKKSRGGCGAQQPK+TIDGMKM+AEYKAQR
Sbjct: 134 LKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTIDGMKMIAEYKAQR 193
Query: 4250 KKNDDTEQLPEPAERKQQLTAERVLSVLKRVTDEDCVLLGLDPKYARPDWMILQVLXXXX 4071
KKNDD EQLPEP ERKQ LTAERVLSVLKR++DEDC LLGL+PKYARPDWMILQVL
Sbjct: 194 KKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPP 253
Query: 4070 XXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 3891
PSVMMDTSSRSEDDLTH LAMIIRHNENLRRQERNG+PAHIISEFAQLLQFH+ATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHVATY 313
Query: 3890 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 3711
FDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INID+
Sbjct: 314 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDE 373
Query: 3710 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK 3531
LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 3530 TSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 3351
+SDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRI+IMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYNA 493
Query: 3350 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 3171
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 3170 IEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHAESET 2991
IEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQINLLRTSAWH+ESET
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESET 613
Query: 2990 GFITPGDTQVRIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDAARKFLGHTQWLVNY 2811
G ITPGDTQVRIE+ GSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 2810 WLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQEKILEPEPGRTMMESFE 2631
WLLQN FSIGIGDTIADA+TME INETISKAK++VK+LI AQ K LEPEPGRTMMESFE
Sbjct: 674 WLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDLEPEPGRTMMESFE 733
Query: 2630 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2451
N+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2450 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2271
P+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2270 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKLEFNK 2091
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF++
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDR 913
Query: 2090 LFTYEIGHENWNP-SYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRYQLGSEIATTGDNS 1914
+F Y+I ENWNP SYMLPEH+EDL+TI E R+VFDAEV KLEADRYQLG+EIA TGD++
Sbjct: 914 VFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRYQLGTEIAVTGDSN 973
Query: 1913 WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDFLSVEAQKN 1734
WP+PVNLKRLIWNAQKTFKVD RR SD+HP+EIV++VDKLQERL+VVPG D LSVEAQKN
Sbjct: 974 WPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVVPGADPLSVEAQKN 1033
Query: 1733 ATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIETRFLQSLVAPGEMIGCVAAQSIG 1554
ATLFF ILLRST ASKRVL+EYRLT+EAF+WVIGEIE+RFLQSLVAPGEMIGCVAAQSIG
Sbjct: 1034 ATLFFCILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1093
Query: 1553 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKEKAKT 1374
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL PE +KTKEKAK
Sbjct: 1094 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLSPEASKTKEKAKN 1153
Query: 1373 VQCALEYTTLRSVTQATEVWYDPDPTTTIIEEDVDFVQSYYEMPDDEVAPEKISPWLLRI 1194
VQCALEYTTLRSVT ATEVWYDPDP +TIIEED+DFV+SYYEMPD+EVAPEKISPWLLRI
Sbjct: 1154 VQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEVAPEKISPWLLRI 1213
Query: 1193 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDMQDE 1014
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKG++ DE
Sbjct: 1214 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1273
Query: 1013 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDRDEGFKPENEWMLDTEGVN 834
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K +KFD +G+K EW+LDTEGVN
Sbjct: 1274 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYKTGEEWVLDTEGVN 1333
Query: 833 LLAVICHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 654
LLAV+CHEDVDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1334 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1393
Query: 653 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQ 474
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D+LRGVTENIMLGQ
Sbjct: 1394 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQ 1453
Query: 473 LAPIGTGDCALYLNDAMLQQAIELQLPSYMEGGGLDFGVTPSRSPITGTPYHDGMMSPNY 294
LAPIGTGDCALYLND ML+ AIELQLPSYME GL+FG+TP+RSP++GTPYH+GMMSP+Y
Sbjct: 1454 LAPIGTGDCALYLNDEMLKNAIELQLPSYME--GLEFGMTPARSPVSGTPYHEGMMSPSY 1511
Query: 293 LLSPNVRASPSTDAQFSPYVGGMAF 219
LLSPN+R SP +DAQFSPYVGGMAF
Sbjct: 1512 LLSPNLRLSPISDAQFSPYVGGMAF 1536