BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00001731
         (1534 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II tra...   580   e-162
ref|XP_010265228.1| PREDICTED: mediator of RNA polymerase II tra...   568   e-159
ref|XP_012082045.1| PREDICTED: mediator of RNA polymerase II tra...   564   e-158
ref|XP_012082044.1| PREDICTED: mediator of RNA polymerase II tra...   564   e-158
gb|KDP29373.1| hypothetical protein JCGZ_18294 [Jatropha curcas]      564   e-158
emb|CBI27055.3| unnamed protein product [Vitis vinifera]              554   e-155
ref|XP_007046291.1| Phytochrome and flowering time regulatory pr...   548   e-153
ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II tra...   548   e-153
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr...   547   e-153
gb|KHG24986.1| Mediator of RNA polymerase II transcription subun...   542   e-151
ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II tra...   541   e-151
ref|XP_009356323.1| PREDICTED: mediator of RNA polymerase II tra...   536   e-149
ref|XP_009356316.1| PREDICTED: mediator of RNA polymerase II tra...   536   e-149
ref|XP_007046292.1| Phytochrome and flowering time regulatory pr...   536   e-149
ref|XP_012463728.1| PREDICTED: mediator of RNA polymerase II tra...   531   e-148
gb|KJB80077.1| hypothetical protein B456_013G080300 [Gossypium r...   531   e-148
gb|KJB80076.1| hypothetical protein B456_013G080300 [Gossypium r...   531   e-148
gb|KJB80075.1| hypothetical protein B456_013G080300 [Gossypium r...   531   e-148
ref|XP_012463724.1| PREDICTED: mediator of RNA polymerase II tra...   531   e-148
ref|XP_012463725.1| PREDICTED: mediator of RNA polymerase II tra...   531   e-148

>ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            [Vitis vinifera]
          Length = 827

 Score =  580 bits (1494), Expect = e-162
 Identities = 307/528 (58%), Positives = 381/528 (72%), Gaps = 20/528 (3%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQK +++  E SLV+FNAHGSY +CLVQRSGWTR+VDLFLQWLSAL F GGGF+D AIAE
Sbjct: 42   GQKPSSSNFELSLVMFNAHGSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAE 101

Query: 1352 GLAEALTMFPVALSGSGTQ-NVDVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GLAEAL MF VA +GS TQ NVD  +HCILV A+NPYPLPTPVYQPQ+  +EQ E+ E+ 
Sbjct: 102  GLAEALMMFSVAANGSQTQQNVDGQRHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TES L+DAE VAKSF +CS SLSV+ PKQLPKL++IYNAGKRNPR A+P VDN+KNP+FL
Sbjct: 162  TESRLSDAEAVAKSFAQCSVSLSVICPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFL 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMD-TSVPPVCGAPPTSISPANGAHMNRQSV 819
            VL+S+SF EAR ALSR G++N+++NQSP+KMD  SVP V  APP SI   NG  MNR ++
Sbjct: 222  VLISDSFMEARAALSRPGLSNMTANQSPVKMDIASVPQVSAAPPASIPSVNGI-MNRPTI 280

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
            + G +P ATVKVEP+T+ S+  GP FPH+PSV  AA Q +P               +NG+
Sbjct: 281  AVGAVPTATVKVEPSTVTSITSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGD 340

Query: 638  SVHEVKP-----------------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPV 510
            +V ++KP                               + SA+L+G +S+GL +MGG  +
Sbjct: 341  NVQDLKPIVSGISQTLRPVVPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSM 400

Query: 509  AMHMSNVISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASAT 330
            AMHMSN+ISSGM SS +P  Q VFSS QS ++            +Q+AQ++ LG+F SAT
Sbjct: 401  AMHMSNMISSGMASS-VPATQTVFSSGQSAVS-SITGSGTLAGTAQVAQNSALGSFTSAT 458

Query: 329  STMSGNSNPGVSQPLNNIQGAVSMGQPVPGMNQGNIPGSQTGQNGIAINQNIMNGLGPS- 153
            S MS NSN G+SQPL+N+QG VSMGQ VPGM+QGN+PG Q  Q+GI +NQN+M+GLGPS 
Sbjct: 459  SNMSVNSNLGISQPLSNLQGGVSMGQTVPGMSQGNLPGGQMVQSGIGMNQNMMSGLGPSG 518

Query: 152  ITSGSGTMIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            I+SG+GTMIPTPGMSQQVQ GM  +GV N + ANM LP Q  GAMQ+A
Sbjct: 519  ISSGTGTMIPTPGMSQQVQPGMPSLGVNNNAAANMPLPQQTSGAMQTA 566


>ref|XP_010265228.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            [Nelumbo nucifera]
          Length = 809

 Score =  568 bits (1465), Expect = e-159
 Identities = 304/515 (59%), Positives = 362/515 (70%), Gaps = 9/515 (1%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQKL     E SLVVFNAHGS SACLVQRSGWT+N+D FLQWLSA+ FTGGGF + AI E
Sbjct: 42   GQKLPGANFELSLVVFNAHGSCSACLVQRSGWTKNMDTFLQWLSAIPFTGGGFCEAAIGE 101

Query: 1352 GLAEALTMFPVALSGSGTQ-NVDVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GL+EAL MF VA +GS TQ NVD  KHCILV ASNPYPLPTPVY+P    +E+ E+ E  
Sbjct: 102  GLSEALMMFCVAPNGSQTQQNVDGQKHCILVAASNPYPLPTPVYRPPNQNLEKNESMEGQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TESCL+DAETVAKSF +C  SLSV+SPKQLPKL+AIYNAGKRNPRAA+P+VDN+KNP FL
Sbjct: 162  TESCLSDAETVAKSFAQCFVSLSVISPKQLPKLKAIYNAGKRNPRAADPSVDNLKNPQFL 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMD-TSVPPVCGAPPTSISPANGAHMNRQSV 819
            +LLSE+F EAR ALSR G+T+++SNQ P+KMD TSVPPV G P  SI   NG  M RQ +
Sbjct: 222  ILLSENFMEARAALSRPGITSLTSNQGPVKMDTTSVPPVSG-PSASIPSVNGPLMTRQQI 280

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
              GN+P ATVKVEP T+ S+V GP F ++P VS+ A Q +P                N +
Sbjct: 281  PVGNIPTATVKVEPTTVSSMVTGPGFSNIPPVSHGATQAVPSLQTSSPIASSQEMIANAD 340

Query: 638  SVHEVKPXXXXXXXXXXXXXXVRSASLTG------ASSMGLPTMGGAPVAMHMSNVISSG 477
            +V E KP                + ++         SS+GL T+G  P+AMHMSN+ISSG
Sbjct: 341  NVQEFKPIVNPVSQPLRPPGAAANVNILNNLSQVRGSSIGLQTVGATPMAMHMSNMISSG 400

Query: 476  MVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASATSTMSGNSNPGV 297
            M SS LP AQ VFSS QS IT            +Q+ Q+T +G+  SA S +SGNSN G+
Sbjct: 401  MASSVLPAAQTVFSSGQSSIT-SLTGSGSLMGTAQVTQNTAIGSLTSAASNISGNSNLGI 459

Query: 296  SQPLNNIQGAVSMGQPVPGMNQGNIPGSQTGQNGIAINQNIMNGLGPS-ITSGSGTMIPT 120
            SQPL NIQGAVSMGQPVP + QGN+ G+Q GQ+GI +NQNIM GLGPS I+SG+GTMIPT
Sbjct: 460  SQPLANIQGAVSMGQPVPTVGQGNLSGTQIGQSGIGMNQNIMTGLGPSGISSGAGTMIPT 519

Query: 119  PGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQ 15
            PGMSQQVQGG Q +GV N S AN+    Q  G +Q
Sbjct: 520  PGMSQQVQGGTQSLGVNNGSAANV---QQTAGTLQ 551


>ref|XP_012082045.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X2 [Jatropha curcas]
          Length = 720

 Score =  564 bits (1454), Expect = e-158
 Identities = 304/528 (57%), Positives = 368/528 (69%), Gaps = 20/528 (3%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQK A +  E SLV F AHGSYSACLVQRSGWTR++D+FLQWLS + F GGGF+D AIAE
Sbjct: 42   GQKPATSTVELSLVTFYAHGSYSACLVQRSGWTRDIDIFLQWLSCIPFAGGGFNDAAIAE 101

Query: 1352 GLAEALTMFPVALSGS-GTQNVDVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GL+EAL MFP A + S   QN D  +HC+LV ASNP+ LPTPVY+PQI  +EQ EN +  
Sbjct: 102  GLSEALMMFPFAPNASQAQQNTDAQRHCVLVAASNPHSLPTPVYRPQIQNLEQSENIDLQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TES L+DAETVAKSFP+CS SLSV+ PKQL KLRAIYNAGKRN R A+PTVDN+KNP+FL
Sbjct: 162  TESRLSDAETVAKSFPQCSVSLSVICPKQLLKLRAIYNAGKRNTRVADPTVDNVKNPHFL 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMD-TSVPPVCGAPPTSISPANGAHMNRQSV 819
            VL+SE+F EAR AL+R GV+N+S+NQSP+KMD +SVP V G PP SIS  NG+ MNR  +
Sbjct: 222  VLISENFMEARTALTRPGVSNLSANQSPVKMDVSSVPSVAGPPPPSISSVNGSIMNRPPI 281

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
            S GN+P ATVK+EP T+ S+ PGP F H+PS +  A Q +P               TNGE
Sbjct: 282  SVGNVPTATVKIEPTTVTSMAPGPVFSHIPS-ARPATQAVPSLQTSSPPTTSQEMMTNGE 340

Query: 638  SVHEVKP-----------------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPV 510
            +V E+KP                               + SA+LTG SS+ LP+M   PV
Sbjct: 341  NVPELKPTVSGMPQSVRPVPPGAANVSILNNLSQARQVMNSAALTGGSSIALPSMNQTPV 400

Query: 509  AMHMSNVISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASAT 330
            AMHMSN+ISSGM +S +P AQ VFSS Q GIT            SQIA ++ LG+FAS+T
Sbjct: 401  AMHMSNMISSGMATS-VPAAQTVFSSGQPGIT-SMTGSGTLTGTSQIAPNSGLGSFASST 458

Query: 329  STMSGNSNPGVSQPLNNIQGAVSMGQPVPGMNQGNIPGSQTGQNGIAINQNIMNGLGPS- 153
            S +SGNSN G+SQP+ N+QG VSMGQ V GM+QGN+ G Q  Q+ I +NQN+MNGLGPS 
Sbjct: 459  SNISGNSNLGISQPMANLQGGVSMGQSVSGMSQGNLSGGQMVQSVIGMNQNVMNGLGPSG 518

Query: 152  ITSGSGTMIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            ++SG+ TMIPTPGM QQ Q GMQ +GV N S ANM L  Q   A+QSA
Sbjct: 519  VSSGTSTMIPTPGMPQQAQTGMQSLGVNNNSAANMPLSQQTTSALQSA 566


>ref|XP_012082044.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X1 [Jatropha curcas]
          Length = 842

 Score =  564 bits (1454), Expect = e-158
 Identities = 304/528 (57%), Positives = 368/528 (69%), Gaps = 20/528 (3%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQK A +  E SLV F AHGSYSACLVQRSGWTR++D+FLQWLS + F GGGF+D AIAE
Sbjct: 42   GQKPATSTVELSLVTFYAHGSYSACLVQRSGWTRDIDIFLQWLSCIPFAGGGFNDAAIAE 101

Query: 1352 GLAEALTMFPVALSGS-GTQNVDVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GL+EAL MFP A + S   QN D  +HC+LV ASNP+ LPTPVY+PQI  +EQ EN +  
Sbjct: 102  GLSEALMMFPFAPNASQAQQNTDAQRHCVLVAASNPHSLPTPVYRPQIQNLEQSENIDLQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TES L+DAETVAKSFP+CS SLSV+ PKQL KLRAIYNAGKRN R A+PTVDN+KNP+FL
Sbjct: 162  TESRLSDAETVAKSFPQCSVSLSVICPKQLLKLRAIYNAGKRNTRVADPTVDNVKNPHFL 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMD-TSVPPVCGAPPTSISPANGAHMNRQSV 819
            VL+SE+F EAR AL+R GV+N+S+NQSP+KMD +SVP V G PP SIS  NG+ MNR  +
Sbjct: 222  VLISENFMEARTALTRPGVSNLSANQSPVKMDVSSVPSVAGPPPPSISSVNGSIMNRPPI 281

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
            S GN+P ATVK+EP T+ S+ PGP F H+PS +  A Q +P               TNGE
Sbjct: 282  SVGNVPTATVKIEPTTVTSMAPGPVFSHIPS-ARPATQAVPSLQTSSPPTTSQEMMTNGE 340

Query: 638  SVHEVKP-----------------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPV 510
            +V E+KP                               + SA+LTG SS+ LP+M   PV
Sbjct: 341  NVPELKPTVSGMPQSVRPVPPGAANVSILNNLSQARQVMNSAALTGGSSIALPSMNQTPV 400

Query: 509  AMHMSNVISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASAT 330
            AMHMSN+ISSGM +S +P AQ VFSS Q GIT            SQIA ++ LG+FAS+T
Sbjct: 401  AMHMSNMISSGMATS-VPAAQTVFSSGQPGIT-SMTGSGTLTGTSQIAPNSGLGSFASST 458

Query: 329  STMSGNSNPGVSQPLNNIQGAVSMGQPVPGMNQGNIPGSQTGQNGIAINQNIMNGLGPS- 153
            S +SGNSN G+SQP+ N+QG VSMGQ V GM+QGN+ G Q  Q+ I +NQN+MNGLGPS 
Sbjct: 459  SNISGNSNLGISQPMANLQGGVSMGQSVSGMSQGNLSGGQMVQSVIGMNQNVMNGLGPSG 518

Query: 152  ITSGSGTMIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            ++SG+ TMIPTPGM QQ Q GMQ +GV N S ANM L  Q   A+QSA
Sbjct: 519  VSSGTSTMIPTPGMPQQAQTGMQSLGVNNNSAANMPLSQQTTSALQSA 566


>gb|KDP29373.1| hypothetical protein JCGZ_18294 [Jatropha curcas]
          Length = 610

 Score =  564 bits (1454), Expect = e-158
 Identities = 304/528 (57%), Positives = 368/528 (69%), Gaps = 20/528 (3%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQK A +  E SLV F AHGSYSACLVQRSGWTR++D+FLQWLS + F GGGF+D AIAE
Sbjct: 42   GQKPATSTVELSLVTFYAHGSYSACLVQRSGWTRDIDIFLQWLSCIPFAGGGFNDAAIAE 101

Query: 1352 GLAEALTMFPVALSGS-GTQNVDVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GL+EAL MFP A + S   QN D  +HC+LV ASNP+ LPTPVY+PQI  +EQ EN +  
Sbjct: 102  GLSEALMMFPFAPNASQAQQNTDAQRHCVLVAASNPHSLPTPVYRPQIQNLEQSENIDLQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TES L+DAETVAKSFP+CS SLSV+ PKQL KLRAIYNAGKRN R A+PTVDN+KNP+FL
Sbjct: 162  TESRLSDAETVAKSFPQCSVSLSVICPKQLLKLRAIYNAGKRNTRVADPTVDNVKNPHFL 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMD-TSVPPVCGAPPTSISPANGAHMNRQSV 819
            VL+SE+F EAR AL+R GV+N+S+NQSP+KMD +SVP V G PP SIS  NG+ MNR  +
Sbjct: 222  VLISENFMEARTALTRPGVSNLSANQSPVKMDVSSVPSVAGPPPPSISSVNGSIMNRPPI 281

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
            S GN+P ATVK+EP T+ S+ PGP F H+PS +  A Q +P               TNGE
Sbjct: 282  SVGNVPTATVKIEPTTVTSMAPGPVFSHIPS-ARPATQAVPSLQTSSPPTTSQEMMTNGE 340

Query: 638  SVHEVKP-----------------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPV 510
            +V E+KP                               + SA+LTG SS+ LP+M   PV
Sbjct: 341  NVPELKPTVSGMPQSVRPVPPGAANVSILNNLSQARQVMNSAALTGGSSIALPSMNQTPV 400

Query: 509  AMHMSNVISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASAT 330
            AMHMSN+ISSGM +S +P AQ VFSS Q GIT            SQIA ++ LG+FAS+T
Sbjct: 401  AMHMSNMISSGMATS-VPAAQTVFSSGQPGIT-SMTGSGTLTGTSQIAPNSGLGSFASST 458

Query: 329  STMSGNSNPGVSQPLNNIQGAVSMGQPVPGMNQGNIPGSQTGQNGIAINQNIMNGLGPS- 153
            S +SGNSN G+SQP+ N+QG VSMGQ V GM+QGN+ G Q  Q+ I +NQN+MNGLGPS 
Sbjct: 459  SNISGNSNLGISQPMANLQGGVSMGQSVSGMSQGNLSGGQMVQSVIGMNQNVMNGLGPSG 518

Query: 152  ITSGSGTMIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            ++SG+ TMIPTPGM QQ Q GMQ +GV N S ANM L  Q   A+QSA
Sbjct: 519  VSSGTSTMIPTPGMPQQAQTGMQSLGVNNNSAANMPLSQQTTSALQSA 566


>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  554 bits (1427), Expect = e-155
 Identities = 298/528 (56%), Positives = 371/528 (70%), Gaps = 20/528 (3%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQK +++  E SLV+FNAHGSY +CLVQRSGWTR+VDLFLQWLSAL F GGGF+D AIAE
Sbjct: 42   GQKPSSSNFELSLVMFNAHGSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAE 101

Query: 1352 GLAEALTMFPVALSGSGTQ-NVDVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GLAEAL MF VA +GS TQ NVD  +HCILV A+NPYPLPTPVYQPQ+  +EQ E+ E+ 
Sbjct: 102  GLAEALMMFSVAANGSQTQQNVDGQRHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TES L+DAE VAKSF +CS SLSV+ PKQLPKL++IYNAGKRNPR A+P VDN+KNP+FL
Sbjct: 162  TESRLSDAEAVAKSFAQCSVSLSVICPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFL 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMD-TSVPPVCGAPPTSISPANGAHMNRQSV 819
            VL+S+SF EAR ALSR G++N+++NQSP+KMD  SVP V  APP SI   NG  MNR ++
Sbjct: 222  VLISDSFMEARAALSRPGLSNMTANQSPVKMDIASVPQVSAAPPASIPSVNGI-MNRPTI 280

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
            + G +P ATVKVEP+T+ S+  GP FPH+PSV  AA Q +P               +NG+
Sbjct: 281  AVGAVPTATVKVEPSTVTSITSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGD 340

Query: 638  SVHEVKP-----------------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPV 510
            +V ++KP                               + SA+L+G +S+GL +MGG  +
Sbjct: 341  NVQDLKPIVSGISQTLRPVVPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSM 400

Query: 509  AMHMSNVISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASAT 330
            AMHMSN+ISSGM SS +P  Q VFSS QS ++            +Q+AQ++ LG+F SAT
Sbjct: 401  AMHMSNMISSGMASS-VPATQTVFSSGQSAVS-SITGSGTLAGTAQVAQNSALGSFTSAT 458

Query: 329  STMSGNSNPGVSQPLNNIQGAVSMGQPVPGMNQGNIPGSQTGQNGIAINQNIMNGLGPS- 153
            S MS NSN G+SQPL            +PGM+QGN+PG Q  Q+GI +NQN+M+GLGPS 
Sbjct: 459  SNMSVNSNLGISQPL------------IPGMSQGNLPGGQMVQSGIGMNQNMMSGLGPSG 506

Query: 152  ITSGSGTMIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            I+SG+GTMIPTPGMSQQVQ GM  +GV N + ANM LP Q  GAMQ+A
Sbjct: 507  ISSGTGTMIPTPGMSQQVQPGMPSLGVNNNAAANMPLPQQTSGAMQTA 554


>ref|XP_007046291.1| Phytochrome and flowering time regulatory protein isoform 1
            [Theobroma cacao] gi|508710226|gb|EOY02123.1| Phytochrome
            and flowering time regulatory protein isoform 1
            [Theobroma cacao]
          Length = 871

 Score =  548 bits (1413), Expect = e-153
 Identities = 294/526 (55%), Positives = 368/526 (69%), Gaps = 18/526 (3%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQK + +  E +LV FN HGSY ACLVQRSGWT++VD+FLQWLSA+ F+GGGF+D AIAE
Sbjct: 42   GQKTSTSNVELALVTFNTHGSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAE 101

Query: 1352 GLAEALTMFPVALSGSGTQ-NVDVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GL+EAL MFP+A +G+ TQ NVD  +HCILV ASNPYPLPTPVY+PQI  +EQ EN EA 
Sbjct: 102  GLSEALMMFPIAPNGNQTQQNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQTENIEAQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TES L+DAETVAKSF +CS SLSV+ PKQL KL+ IY+AGKRNPRA +P VDN++NP FL
Sbjct: 162  TESRLSDAETVAKSFAQCSVSLSVICPKQLSKLKTIYSAGKRNPRAPDPPVDNVRNPPFL 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMD-TSVPPVCGAPPTSISPANGAHMNRQSV 819
            VL+SE+F E R ALSR GV +++SNQSP+KMD  SV    G PPTS+   NG+ M+RQ V
Sbjct: 222  VLISENFMEGRAALSRPGVPSLASNQSPVKMDMASVTSGTGPPPTSVPSVNGSMMSRQPV 281

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
            S GN+P AT+KVEP TI S+  GPAFPH+P+V  A    IP                +G+
Sbjct: 282  SVGNVPTATIKVEPTTITSMGTGPAFPHIPAVPRAPSPAIPTMQTSSPSTTSQEVMNSGD 341

Query: 638  SVHEVKP---------------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPVAM 504
            +V E+KP                             + SA+LTG +S+GLP+MG  PVAM
Sbjct: 342  NVQELKPSVSGMTQPLRPVPPAANVNILNNLSQARVMNSAALTGGTSIGLPSMGQTPVAM 401

Query: 503  HMSNVISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASATST 324
            HMSN+ISSGM SS +P AQ VFSS QS +T             Q+  ++ L +FASATS 
Sbjct: 402  HMSNMISSGMASS-VPPAQTVFSSGQSCMT-SLTGSGALTGTVQVPPNSGLSSFASATSN 459

Query: 323  MSGNSNPGVSQPLNNIQGAVSMGQPVPGMNQGNIPGSQTGQNGIAINQNIMNGLGPS-IT 147
            ++ NSN G+SQP+ N+Q  VSMGQ VPGM+QGN  G+Q  Q+G+ ++QN M+GLGPS ++
Sbjct: 460  VTANSNIGMSQPMGNVQSGVSMGQSVPGMSQGNHSGAQMVQSGVGMSQN-MSGLGPSTVS 518

Query: 146  SGSGTMIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            SG+GTM P PGMSQQVQ GMQ +GV+N+S A+M L  Q   A+QSA
Sbjct: 519  SGTGTMFPIPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSA 564


>ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X2 [Gossypium raimondii]
            gi|763763083|gb|KJB30337.1| hypothetical protein
            B456_005G138200 [Gossypium raimondii]
          Length = 834

 Score =  548 bits (1412), Expect = e-153
 Identities = 294/528 (55%), Positives = 370/528 (70%), Gaps = 20/528 (3%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQK   +  E SLV FN HGSY ACLVQRSGWT++VD+FLQWLSA+ F+GGGF+D AIAE
Sbjct: 42   GQKNTTSNVELSLVTFNTHGSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAE 101

Query: 1352 GLAEALTMFPVALSGSGTQNV-DVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GL+EAL MFP+A +G+ T  + D  +HCILV ASNPYPLPTPVY+PQ   +EQ EN E+ 
Sbjct: 102  GLSEALMMFPIAANGNQTHQIADGQRHCILVAASNPYPLPTPVYRPQTQNLEQSENMESQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TES L+DAETVAKSFP+CS SLSV+ PKQL KL+AIY+AGKRNPRA++P VDN++NP FL
Sbjct: 162  TESRLSDAETVAKSFPQCSVSLSVICPKQLSKLKAIYSAGKRNPRASDPPVDNVRNPQFL 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMD-TSVPPVCGAPPTSISPANGAHMNRQSV 819
            VL+SE+F E   ALSR+GV +++ NQSP+KMD  SV  V G PPTS+   NG+ M+RQ V
Sbjct: 222  VLISENFMEGCAALSRSGVPSLAPNQSPVKMDMASVNAVAGTPPTSVPSVNGSIMSRQPV 281

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
            S GN+P ATVKVEP TI S+  GPAFPH+PSV  A  Q +P                + +
Sbjct: 282  SAGNVPTATVKVEPTTITSMANGPAFPHIPSVPRAPFQAVPMLQTSSPLTTTEEVMRSSD 341

Query: 638  SVHEVKP----------------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPVA 507
            +V E+KP                              + SA+L+G +S+GL +MG  PVA
Sbjct: 342  NVQEIKPSVGGMTQPLRPVPPAAANVNILNNLSQARVMNSAALSGGTSIGLQSMGQTPVA 401

Query: 506  MHMSNVISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASATS 327
            MHMSN+ISSGM SS +P AQ VFSS QSG+T            +Q+  ++ L +FASATS
Sbjct: 402  MHMSNMISSGMTSS-VPLAQTVFSSGQSGMT-SLPGSGAVTGTTQVPPNSNLNSFASATS 459

Query: 326  TMSGNSNPGVSQPLNNIQGAVSMGQPVPG-MNQGNIPGSQTGQNGIAINQNIMNGLGPS- 153
             ++GNSN G+SQP+ N+QGAVSMGQ VPG M+QGN  G+Q  Q G+A++Q+ M+GLGPS 
Sbjct: 460  NVAGNSNIGISQPMCNVQGAVSMGQSVPGSMSQGNHSGAQLVQTGVAMSQS-MSGLGPST 518

Query: 152  ITSGSGTMIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            ++SG+GT+IP PGMSQQVQ GMQ +GV N S A+M L  Q   A+QSA
Sbjct: 519  VSSGTGTLIPAPGMSQQVQSGMQTLGVNNNSAASMPLSQQTSSALQSA 566


>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
            gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 25-like isoform
            X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
            hypothetical protein CICLE_v10030710mg [Citrus
            clementina]
          Length = 830

 Score =  547 bits (1410), Expect = e-153
 Identities = 298/528 (56%), Positives = 365/528 (69%), Gaps = 20/528 (3%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQK +A+  E SLV FN HGSY ACLVQRSGWT++VD+FL WLS + F GGGF+D AIAE
Sbjct: 42   GQKTSASNVELSLVTFNTHGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAE 101

Query: 1352 GLAEALTMFPVALSGS-GTQNVDVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GL+EAL MF VA +GS   QNVD  +HCILV ASNP+PLPTPVY+PQ+  ++Q EN EA 
Sbjct: 102  GLSEALMMFSVAPNGSQNQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
             ES L+DAETVAKSF +CS SLSV+ PKQLPKL AIYNA KRNPRAA+P VDN KNP+FL
Sbjct: 162  AESRLSDAETVAKSFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFL 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMDTS-VPPVCGAPPTSISPANGAHMNRQSV 819
            VL+SE+F EAR ALSR GV N++ NQ+P+KMD + V  V G  PTSI   NG  +NR  +
Sbjct: 222  VLISENFMEARAALSRPGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPI 279

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
            S GN+P ATVKVEP+T+ S+V GP FPH+PSVS  A Q +P               T+G+
Sbjct: 280  SVGNVPTATVKVEPSTVTSMVNGPTFPHIPSVSRPASQGVPSLQTSSPSSTSQEMITSGD 339

Query: 638  SVHEVKP-----------------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPV 510
            SV EVKP                               + +A+LTG +S+GL +MG  P+
Sbjct: 340  SVPEVKPLVSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPM 399

Query: 509  AMHMSNVISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASAT 330
            AMHMSN+ISSGM SS +PT+Q VFSSAQSGIT            SQ+ Q++ L +F SA 
Sbjct: 400  AMHMSNMISSGMASS-VPTSQPVFSSAQSGIT-SIGGSGTLTGTSQVPQNSGLNSFTSAP 457

Query: 329  STMSGNSNPGVSQPLNNIQGAVSMGQPVPGMNQGNIPGSQTGQNGIAINQNIMNGLGPS- 153
            S +SGNSNP +SQP+  +QG  SMGQ V GM+QGN  G Q  QNGI++NQN+M+GLGPS 
Sbjct: 458  SNLSGNSNPSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSG 516

Query: 152  ITSGSGTMIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            ++SG+GTMIPTPGMSQQ Q GMQP+ V N +  NM L  Q   A+ S+
Sbjct: 517  VSSGTGTMIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSS 564


>gb|KHG24986.1| Mediator of RNA polymerase II transcription subunit 25 [Gossypium
            arboreum]
          Length = 828

 Score =  542 bits (1396), Expect = e-151
 Identities = 292/528 (55%), Positives = 368/528 (69%), Gaps = 20/528 (3%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQK   +  E SLV FN HGSY ACLVQRSGWT++VD+FLQWLSA+ F+GGGF+D AIAE
Sbjct: 42   GQKNTTSNVELSLVAFNTHGSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAE 101

Query: 1352 GLAEALTMFPVALSGSGTQNV-DVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GL+EAL MFP+A +G+ T  + D  +HCILV ASNPYPLPTPVY+PQ   +EQ EN E+ 
Sbjct: 102  GLSEALMMFPIAANGNQTHQIADGQRHCILVAASNPYPLPTPVYRPQTQNLEQSENMESQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TES L+DAETVAKSFP+CS SLSV+ PKQL KL+AIY+AGKRNPRA++P VDN++NP FL
Sbjct: 162  TESRLSDAETVAKSFPQCSVSLSVICPKQLSKLKAIYSAGKRNPRASDPPVDNVRNPQFL 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMD-TSVPPVCGAPPTSISPANGAHMNRQSV 819
            VL+SE+F E   ALSR+GV +++ NQSP+KMD  SV  V G  PTS+   NG+ M+RQ V
Sbjct: 222  VLISENFMEGCAALSRSGVPSLAPNQSPVKMDMASVTSVAGTSPTSVPSVNGSIMSRQPV 281

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
            S GN+P ATVKVEP TI S+  GPAFPH+PSV  A  Q +P                + +
Sbjct: 282  SVGNVPTATVKVEPATITSMANGPAFPHIPSVPRAPFQAVPTLQTSSPLTTTEEVMRSSD 341

Query: 638  SVHEVKP----------------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPVA 507
            +V E+KP                              + SA+L+G +S+GL +MG  PVA
Sbjct: 342  NVQEIKPSVGGMTQPLRPVPPAAANVNILNNLSQARVMNSAALSGGTSIGLQSMGQTPVA 401

Query: 506  MHMSNVISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASATS 327
            MHMSN+ISSGM SS +P AQ VFSS QS +T            +Q+  ++ L +FASATS
Sbjct: 402  MHMSNMISSGMTSS-VPLAQTVFSSGQSAMT-SLPGSGAVTGTTQVPPNSNLNSFASATS 459

Query: 326  TMSGNSNPGVSQPLNNIQGAVSMGQPVPG-MNQGNIPGSQTGQNGIAINQNIMNGLGPS- 153
             ++GNSN G+SQP+ N+QGAVSMGQ VPG M+ GN  G+Q  Q G+A++Q+ M+GLGPS 
Sbjct: 460  NVAGNSNIGISQPMCNVQGAVSMGQSVPGSMSHGNHSGAQLVQTGVAMSQS-MSGLGPST 518

Query: 152  ITSGSGTMIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            ++SG+GT+IPTPG+SQQVQ GMQ IGV N S A+M L  Q   A+QSA
Sbjct: 519  VSSGTGTLIPTPGLSQQVQSGMQTIGVNNNSAASMPLSQQTSSALQSA 566


>ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X1 [Gossypium raimondii]
          Length = 840

 Score =  541 bits (1395), Expect = e-151
 Identities = 294/534 (55%), Positives = 370/534 (69%), Gaps = 26/534 (4%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQK   +  E SLV FN HGSY ACLVQRSGWT++VD+FLQWLSA+ F+GGGF+D AIAE
Sbjct: 42   GQKNTTSNVELSLVTFNTHGSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAE 101

Query: 1352 GLAEALT------MFPVALSGSGTQNV-DVNKHCILVTASNPYPLPTPVYQPQIPKVEQG 1194
            GL+EAL       MFP+A +G+ T  + D  +HCILV ASNPYPLPTPVY+PQ   +EQ 
Sbjct: 102  GLSEALMSFDVAQMFPIAANGNQTHQIADGQRHCILVAASNPYPLPTPVYRPQTQNLEQS 161

Query: 1193 ENAEASTESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNI 1014
            EN E+ TES L+DAETVAKSFP+CS SLSV+ PKQL KL+AIY+AGKRNPRA++P VDN+
Sbjct: 162  ENMESQTESRLSDAETVAKSFPQCSVSLSVICPKQLSKLKAIYSAGKRNPRASDPPVDNV 221

Query: 1013 KNPYFLVLLSESFTEARNALSRTGVTNISSNQSPIKMD-TSVPPVCGAPPTSISPANGAH 837
            +NP FLVL+SE+F E   ALSR+GV +++ NQSP+KMD  SV  V G PPTS+   NG+ 
Sbjct: 222  RNPQFLVLISENFMEGCAALSRSGVPSLAPNQSPVKMDMASVNAVAGTPPTSVPSVNGSI 281

Query: 836  MNRQSVSTGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXX 657
            M+RQ VS GN+P ATVKVEP TI S+  GPAFPH+PSV  A  Q +P             
Sbjct: 282  MSRQPVSAGNVPTATVKVEPTTITSMANGPAFPHIPSVPRAPFQAVPMLQTSSPLTTTEE 341

Query: 656  XXTNGESVHEVKP----------------XXXXXXXXXXXXXXVRSASLTGASSMGLPTM 525
               + ++V E+KP                              + SA+L+G +S+GL +M
Sbjct: 342  VMRSSDNVQEIKPSVGGMTQPLRPVPPAAANVNILNNLSQARVMNSAALSGGTSIGLQSM 401

Query: 524  GGAPVAMHMSNVISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGT 345
            G  PVAMHMSN+ISSGM SS +P AQ VFSS QSG+T            +Q+  ++ L +
Sbjct: 402  GQTPVAMHMSNMISSGMTSS-VPLAQTVFSSGQSGMT-SLPGSGAVTGTTQVPPNSNLNS 459

Query: 344  FASATSTMSGNSNPGVSQPLNNIQGAVSMGQPVPG-MNQGNIPGSQTGQNGIAINQNIMN 168
            FASATS ++GNSN G+SQP+ N+QGAVSMGQ VPG M+QGN  G+Q  Q G+A++Q+ M+
Sbjct: 460  FASATSNVAGNSNIGISQPMCNVQGAVSMGQSVPGSMSQGNHSGAQLVQTGVAMSQS-MS 518

Query: 167  GLGPS-ITSGSGTMIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            GLGPS ++SG+GT+IP PGMSQQVQ GMQ +GV N S A+M L  Q   A+QSA
Sbjct: 519  GLGPSTVSSGTGTLIPAPGMSQQVQSGMQTLGVNNNSAASMPLSQQTSSALQSA 572


>ref|XP_009356323.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X2 [Pyrus x bretschneideri]
            gi|694311125|ref|XP_009356332.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 25-like isoform
            X2 [Pyrus x bretschneideri]
            gi|694311127|ref|XP_009356340.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 25-like isoform
            X2 [Pyrus x bretschneideri]
          Length = 839

 Score =  536 bits (1382), Expect = e-149
 Identities = 288/521 (55%), Positives = 360/521 (69%), Gaps = 13/521 (2%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQKL+ +  E SLV FN HGSY  CLVQRSGWTR+VDLFL WLSA+ F+GGGFSD AIAE
Sbjct: 42   GQKLSTSTVELSLVTFNTHGSYCGCLVQRSGWTRDVDLFLHWLSAIPFSGGGFSDAAIAE 101

Query: 1352 GLAEALTMFPVALSGS-GTQNVDVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GL+EAL MFP   +GS   QNVD  KHC+L+ ASNP+PLPTPVY+PQI  +EQ EN +A 
Sbjct: 102  GLSEALMMFPTVQNGSQNQQNVDFQKHCVLIAASNPHPLPTPVYRPQIQNLEQNENIDAQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TE+ L DAE VAKSFP+ S SLSV+ PKQLPKLRAIYNAGKRNPRAA+P +DN KNP+F+
Sbjct: 162  TENRLYDAEAVAKSFPQSSVSLSVICPKQLPKLRAIYNAGKRNPRAADPPIDNAKNPHFI 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMDTS-VPPVCGAPPTSISPANGAHMNRQSV 819
            VL+SE+F EAR  LSR G+T + SNQSP+KMD + V  V G PPTS+   NG  MNRQ +
Sbjct: 222  VLISENFMEARATLSRPGITTLPSNQSPVKMDIAPVASVTGPPPTSMPSVNGPVMNRQPI 281

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
            S GN+P ATVKVEP+T+ S+  GP+F H+PSV     Q +P               TN +
Sbjct: 282  SVGNVPPATVKVEPSTVSSM--GPSFAHIPSV-RPPSQGVPSLQTSSPSSASQEMATNND 338

Query: 638  SVHEVKP----------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPVAMHMSNV 489
            +V ++KP                        + +A+LTG +SMGLPTMG  P+AMH+SN+
Sbjct: 339  NVPDLKPVVSGVTHPSRPVGSILNNISQARVMNAAALTGGTSMGLPTMGQNPMAMHVSNM 398

Query: 488  ISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASATSTMSGNS 309
            ISSGM SS +  AQNVFSS+ SG              +Q+AQ+  L +F S TS +SGN+
Sbjct: 399  ISSGMASS-VGAAQNVFSSSGSG------------TLTQVAQNPGLNSFTSGTSNVSGNN 445

Query: 308  NPGVSQPLNNIQGAVSMGQPVPGMNQGNIPGSQTGQNGIAINQNIMNGLGPS-ITSGSGT 132
            N G+SQP++N+QG VSMGQ VPGM+QGN+ G Q  Q+GI +N N+M+ LG +  +SG+GT
Sbjct: 446  NLGMSQPMSNLQGGVSMGQAVPGMSQGNLSGQQMVQSGIGMNPNMMSALGSTGASSGTGT 505

Query: 131  MIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            MIPTPGM+QQVQ GMQ +G  N S +N+    Q   A+ SA
Sbjct: 506  MIPTPGMAQQVQSGMQSLGANNNSASNVPFSQQTSSALASA 546


>ref|XP_009356316.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X1 [Pyrus x bretschneideri]
          Length = 846

 Score =  536 bits (1382), Expect = e-149
 Identities = 288/521 (55%), Positives = 360/521 (69%), Gaps = 13/521 (2%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQKL+ +  E SLV FN HGSY  CLVQRSGWTR+VDLFL WLSA+ F+GGGFSD AIAE
Sbjct: 42   GQKLSTSTVELSLVTFNTHGSYCGCLVQRSGWTRDVDLFLHWLSAIPFSGGGFSDAAIAE 101

Query: 1352 GLAEALTMFPVALSGS-GTQNVDVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GL+EAL MFP   +GS   QNVD  KHC+L+ ASNP+PLPTPVY+PQI  +EQ EN +A 
Sbjct: 102  GLSEALMMFPTVQNGSQNQQNVDFQKHCVLIAASNPHPLPTPVYRPQIQNLEQNENIDAQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TE+ L DAE VAKSFP+ S SLSV+ PKQLPKLRAIYNAGKRNPRAA+P +DN KNP+F+
Sbjct: 162  TENRLYDAEAVAKSFPQSSVSLSVICPKQLPKLRAIYNAGKRNPRAADPPIDNAKNPHFI 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMDTS-VPPVCGAPPTSISPANGAHMNRQSV 819
            VL+SE+F EAR  LSR G+T + SNQSP+KMD + V  V G PPTS+   NG  MNRQ +
Sbjct: 222  VLISENFMEARATLSRPGITTLPSNQSPVKMDIAPVASVTGPPPTSMPSVNGPVMNRQPI 281

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
            S GN+P ATVKVEP+T+ S+  GP+F H+PSV     Q +P               TN +
Sbjct: 282  SVGNVPPATVKVEPSTVSSM--GPSFAHIPSV-RPPSQGVPSLQTSSPSSASQEMATNND 338

Query: 638  SVHEVKP----------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPVAMHMSNV 489
            +V ++KP                        + +A+LTG +SMGLPTMG  P+AMH+SN+
Sbjct: 339  NVPDLKPVVSGVTHPSRPVGSILNNISQARVMNAAALTGGTSMGLPTMGQNPMAMHVSNM 398

Query: 488  ISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASATSTMSGNS 309
            ISSGM SS +  AQNVFSS+ SG              +Q+AQ+  L +F S TS +SGN+
Sbjct: 399  ISSGMASS-VGAAQNVFSSSGSG------------TLTQVAQNPGLNSFTSGTSNVSGNN 445

Query: 308  NPGVSQPLNNIQGAVSMGQPVPGMNQGNIPGSQTGQNGIAINQNIMNGLGPS-ITSGSGT 132
            N G+SQP++N+QG VSMGQ VPGM+QGN+ G Q  Q+GI +N N+M+ LG +  +SG+GT
Sbjct: 446  NLGMSQPMSNLQGGVSMGQAVPGMSQGNLSGQQMVQSGIGMNPNMMSALGSTGASSGTGT 505

Query: 131  MIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            MIPTPGM+QQVQ GMQ +G  N S +N+    Q   A+ SA
Sbjct: 506  MIPTPGMAQQVQSGMQSLGANNNSASNVPFSQQTSSALASA 546


>ref|XP_007046292.1| Phytochrome and flowering time regulatory protein isoform 2
            [Theobroma cacao] gi|508710227|gb|EOY02124.1| Phytochrome
            and flowering time regulatory protein isoform 2
            [Theobroma cacao]
          Length = 860

 Score =  536 bits (1380), Expect = e-149
 Identities = 288/525 (54%), Positives = 364/525 (69%), Gaps = 17/525 (3%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQK + +  E +LV FN HGSY ACLVQRSGWT++VD+FLQWLSA+ F+GGGF+D AIAE
Sbjct: 42   GQKTSTSNVELALVTFNTHGSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAE 101

Query: 1352 GLAEALTMFPVALSGSGTQ-NVDVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GL+EAL MFP+A +G+ TQ NVD  +HCILV ASNPYPLPTPVY+PQI  +EQ EN EA 
Sbjct: 102  GLSEALMMFPIAPNGNQTQQNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQTENIEAQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TES L+DAETVAKSF +CS SLSV+ PKQL KL+ IY+AGKRNPRA +P VDN++NP FL
Sbjct: 162  TESRLSDAETVAKSFAQCSVSLSVICPKQLSKLKTIYSAGKRNPRAPDPPVDNVRNPPFL 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMDTSVPPVCGAPPTSISPANGAHMNRQSVS 816
            VL+SE+F E R ALSR GV +++SNQSP+KMD +          S++  NG+ M+RQ VS
Sbjct: 222  VLISENFMEGRAALSRPGVPSLASNQSPVKMDMA----------SVTSVNGSMMSRQPVS 271

Query: 815  TGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGES 636
             GN+P AT+KVEP TI S+  GPAFPH+P+V  A    IP                +G++
Sbjct: 272  VGNVPTATIKVEPTTITSMGTGPAFPHIPAVPRAPSPAIPTMQTSSPSTTSQEVMNSGDN 331

Query: 635  VHEVKP---------------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPVAMH 501
            V E+KP                             + SA+LTG +S+GLP+MG  PVAMH
Sbjct: 332  VQELKPSVSGMTQPLRPVPPAANVNILNNLSQARVMNSAALTGGTSIGLPSMGQTPVAMH 391

Query: 500  MSNVISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASATSTM 321
            MSN+ISSGM SS +P AQ VFSS QS +T             Q+  ++ L +FASATS +
Sbjct: 392  MSNMISSGMASS-VPPAQTVFSSGQSCMT-SLTGSGALTGTVQVPPNSGLSSFASATSNV 449

Query: 320  SGNSNPGVSQPLNNIQGAVSMGQPVPGMNQGNIPGSQTGQNGIAINQNIMNGLGPS-ITS 144
            + NSN G+SQP+ N+Q  VSMGQ VPGM+QGN  G+Q  Q+G+ ++QN M+GLGPS ++S
Sbjct: 450  TANSNIGMSQPMGNVQSGVSMGQSVPGMSQGNHSGAQMVQSGVGMSQN-MSGLGPSTVSS 508

Query: 143  GSGTMIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            G+GTM P PGMSQQVQ GMQ +GV+N+S A+M L  Q   A+QSA
Sbjct: 509  GTGTMFPIPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSA 553


>ref|XP_012463728.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X4 [Gossypium raimondii]
          Length = 707

 Score =  531 bits (1369), Expect = e-148
 Identities = 289/527 (54%), Positives = 369/527 (70%), Gaps = 19/527 (3%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQK + +  EFSLV FN HGSY ACLVQRSGWT++VD+FLQWLSA+ F+GGGF+D AIAE
Sbjct: 42   GQKNSTSNVEFSLVTFNTHGSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAE 101

Query: 1352 GLAEALTMFPVALSGSGT-QNVDVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GL+EAL MFP+A +G+ T QNVD  +HCILV ASNPYPLPTPVY+PQI  +EQ EN+EA 
Sbjct: 102  GLSEALMMFPIASNGNQTPQNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQVENSEAQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TESCL+DAETVA+SF +CS SLSV+ PKQL KL+AIY+AGKRNPRAA+P VDN+KN  FL
Sbjct: 162  TESCLSDAETVARSFAQCSVSLSVICPKQLAKLKAIYSAGKRNPRAADPPVDNVKNSQFL 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMD-TSVPPVCGAPPTSISPANGAHMNRQSV 819
            VL+SE+F E R ALSR+GV ++++NQSP+KMD  SV  V G  P+S+   NG+ + +  V
Sbjct: 222  VLISENFMEGRAALSRSGVPSLATNQSPVKMDMASVTSVMGPSPSSV---NGSMVGKLPV 278

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
            S GN+  ATVKVEP TI S+  GPAF H+PSV     Q IP               T+G+
Sbjct: 279  SVGNVATATVKVEPTTITSMATGPAFSHVPSVPRVPSQAIPTLQTSSPLTNTQEGMTSGD 338

Query: 638  SVHEVKP----------------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPVA 507
            ++ E+KP                              + SA+LTG +S+GL +MG  PVA
Sbjct: 339  NMQELKPSVSGMTQPSRPVPPAAANVNILNNLSQARVMSSAALTGGTSIGLQSMGQTPVA 398

Query: 506  MHMSNVISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASATS 327
            MHMSN+ISSGM SS +P A  V SS Q  +T            +Q+  ++ L TF+SA+S
Sbjct: 399  MHMSNMISSGMASS-VPPAHTVLSSGQPTMT-SLTGSGALTGTAQVPPNSGLSTFSSASS 456

Query: 326  TMSGNSNPGVSQPLNNIQGAVSMGQPVPGMNQGNIPGSQTGQNGIAINQNIMNGLGPS-I 150
             ++GNSN G+SQP  N+QGAV++GQ VPGM+QGN  G+Q  Q+G+ ++QN M+ LG S +
Sbjct: 457  NVAGNSNIGISQPTGNVQGAVNIGQSVPGMSQGNHSGTQMMQSGVGMSQN-MSALGQSTV 515

Query: 149  TSGSGTMIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            +SG+GTMIPTPGMSQQVQ GMQ +GV+N+S A+M L  Q   A+QSA
Sbjct: 516  SSGNGTMIPTPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSA 562


>gb|KJB80077.1| hypothetical protein B456_013G080300 [Gossypium raimondii]
          Length = 795

 Score =  531 bits (1369), Expect = e-148
 Identities = 289/527 (54%), Positives = 369/527 (70%), Gaps = 19/527 (3%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQK + +  EFSLV FN HGSY ACLVQRSGWT++VD+FLQWLSA+ F+GGGF+D AIAE
Sbjct: 42   GQKNSTSNVEFSLVTFNTHGSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAE 101

Query: 1352 GLAEALTMFPVALSGSGT-QNVDVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GL+EAL MFP+A +G+ T QNVD  +HCILV ASNPYPLPTPVY+PQI  +EQ EN+EA 
Sbjct: 102  GLSEALMMFPIASNGNQTPQNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQVENSEAQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TESCL+DAETVA+SF +CS SLSV+ PKQL KL+AIY+AGKRNPRAA+P VDN+KN  FL
Sbjct: 162  TESCLSDAETVARSFAQCSVSLSVICPKQLAKLKAIYSAGKRNPRAADPPVDNVKNSQFL 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMD-TSVPPVCGAPPTSISPANGAHMNRQSV 819
            VL+SE+F E R ALSR+GV ++++NQSP+KMD  SV  V G  P+S+   NG+ + +  V
Sbjct: 222  VLISENFMEGRAALSRSGVPSLATNQSPVKMDMASVTSVMGPSPSSV---NGSMVGKLPV 278

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
            S GN+  ATVKVEP TI S+  GPAF H+PSV     Q IP               T+G+
Sbjct: 279  SVGNVATATVKVEPTTITSMATGPAFSHVPSVPRVPSQAIPTLQTSSPLTNTQEGMTSGD 338

Query: 638  SVHEVKP----------------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPVA 507
            ++ E+KP                              + SA+LTG +S+GL +MG  PVA
Sbjct: 339  NMQELKPSVSGMTQPSRPVPPAAANVNILNNLSQARVMSSAALTGGTSIGLQSMGQTPVA 398

Query: 506  MHMSNVISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASATS 327
            MHMSN+ISSGM SS +P A  V SS Q  +T            +Q+  ++ L TF+SA+S
Sbjct: 399  MHMSNMISSGMASS-VPPAHTVLSSGQPTMT-SLTGSGALTGTAQVPPNSGLSTFSSASS 456

Query: 326  TMSGNSNPGVSQPLNNIQGAVSMGQPVPGMNQGNIPGSQTGQNGIAINQNIMNGLGPS-I 150
             ++GNSN G+SQP  N+QGAV++GQ VPGM+QGN  G+Q  Q+G+ ++QN M+ LG S +
Sbjct: 457  NVAGNSNIGISQPTGNVQGAVNIGQSVPGMSQGNHSGTQMMQSGVGMSQN-MSALGQSTV 515

Query: 149  TSGSGTMIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            +SG+GTMIPTPGMSQQVQ GMQ +GV+N+S A+M L  Q   A+QSA
Sbjct: 516  SSGNGTMIPTPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSA 562


>gb|KJB80076.1| hypothetical protein B456_013G080300 [Gossypium raimondii]
          Length = 810

 Score =  531 bits (1369), Expect = e-148
 Identities = 289/527 (54%), Positives = 369/527 (70%), Gaps = 19/527 (3%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQK + +  EFSLV FN HGSY ACLVQRSGWT++VD+FLQWLSA+ F+GGGF+D AIAE
Sbjct: 42   GQKNSTSNVEFSLVTFNTHGSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAE 101

Query: 1352 GLAEALTMFPVALSGSGT-QNVDVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GL+EAL MFP+A +G+ T QNVD  +HCILV ASNPYPLPTPVY+PQI  +EQ EN+EA 
Sbjct: 102  GLSEALMMFPIASNGNQTPQNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQVENSEAQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TESCL+DAETVA+SF +CS SLSV+ PKQL KL+AIY+AGKRNPRAA+P VDN+KN  FL
Sbjct: 162  TESCLSDAETVARSFAQCSVSLSVICPKQLAKLKAIYSAGKRNPRAADPPVDNVKNSQFL 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMD-TSVPPVCGAPPTSISPANGAHMNRQSV 819
            VL+SE+F E R ALSR+GV ++++NQSP+KMD  SV  V G  P+S+   NG+ + +  V
Sbjct: 222  VLISENFMEGRAALSRSGVPSLATNQSPVKMDMASVTSVMGPSPSSV---NGSMVGKLPV 278

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
            S GN+  ATVKVEP TI S+  GPAF H+PSV     Q IP               T+G+
Sbjct: 279  SVGNVATATVKVEPTTITSMATGPAFSHVPSVPRVPSQAIPTLQTSSPLTNTQEGMTSGD 338

Query: 638  SVHEVKP----------------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPVA 507
            ++ E+KP                              + SA+LTG +S+GL +MG  PVA
Sbjct: 339  NMQELKPSVSGMTQPSRPVPPAAANVNILNNLSQARVMSSAALTGGTSIGLQSMGQTPVA 398

Query: 506  MHMSNVISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASATS 327
            MHMSN+ISSGM SS +P A  V SS Q  +T            +Q+  ++ L TF+SA+S
Sbjct: 399  MHMSNMISSGMASS-VPPAHTVLSSGQPTMT-SLTGSGALTGTAQVPPNSGLSTFSSASS 456

Query: 326  TMSGNSNPGVSQPLNNIQGAVSMGQPVPGMNQGNIPGSQTGQNGIAINQNIMNGLGPS-I 150
             ++GNSN G+SQP  N+QGAV++GQ VPGM+QGN  G+Q  Q+G+ ++QN M+ LG S +
Sbjct: 457  NVAGNSNIGISQPTGNVQGAVNIGQSVPGMSQGNHSGTQMMQSGVGMSQN-MSALGQSTV 515

Query: 149  TSGSGTMIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            +SG+GTMIPTPGMSQQVQ GMQ +GV+N+S A+M L  Q   A+QSA
Sbjct: 516  SSGNGTMIPTPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSA 562


>gb|KJB80075.1| hypothetical protein B456_013G080300 [Gossypium raimondii]
          Length = 683

 Score =  531 bits (1369), Expect = e-148
 Identities = 289/527 (54%), Positives = 369/527 (70%), Gaps = 19/527 (3%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQK + +  EFSLV FN HGSY ACLVQRSGWT++VD+FLQWLSA+ F+GGGF+D AIAE
Sbjct: 42   GQKNSTSNVEFSLVTFNTHGSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAE 101

Query: 1352 GLAEALTMFPVALSGSGT-QNVDVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GL+EAL MFP+A +G+ T QNVD  +HCILV ASNPYPLPTPVY+PQI  +EQ EN+EA 
Sbjct: 102  GLSEALMMFPIASNGNQTPQNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQVENSEAQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TESCL+DAETVA+SF +CS SLSV+ PKQL KL+AIY+AGKRNPRAA+P VDN+KN  FL
Sbjct: 162  TESCLSDAETVARSFAQCSVSLSVICPKQLAKLKAIYSAGKRNPRAADPPVDNVKNSQFL 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMD-TSVPPVCGAPPTSISPANGAHMNRQSV 819
            VL+SE+F E R ALSR+GV ++++NQSP+KMD  SV  V G  P+S+   NG+ + +  V
Sbjct: 222  VLISENFMEGRAALSRSGVPSLATNQSPVKMDMASVTSVMGPSPSSV---NGSMVGKLPV 278

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
            S GN+  ATVKVEP TI S+  GPAF H+PSV     Q IP               T+G+
Sbjct: 279  SVGNVATATVKVEPTTITSMATGPAFSHVPSVPRVPSQAIPTLQTSSPLTNTQEGMTSGD 338

Query: 638  SVHEVKP----------------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPVA 507
            ++ E+KP                              + SA+LTG +S+GL +MG  PVA
Sbjct: 339  NMQELKPSVSGMTQPSRPVPPAAANVNILNNLSQARVMSSAALTGGTSIGLQSMGQTPVA 398

Query: 506  MHMSNVISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASATS 327
            MHMSN+ISSGM SS +P A  V SS Q  +T            +Q+  ++ L TF+SA+S
Sbjct: 399  MHMSNMISSGMASS-VPPAHTVLSSGQPTMT-SLTGSGALTGTAQVPPNSGLSTFSSASS 456

Query: 326  TMSGNSNPGVSQPLNNIQGAVSMGQPVPGMNQGNIPGSQTGQNGIAINQNIMNGLGPS-I 150
             ++GNSN G+SQP  N+QGAV++GQ VPGM+QGN  G+Q  Q+G+ ++QN M+ LG S +
Sbjct: 457  NVAGNSNIGISQPTGNVQGAVNIGQSVPGMSQGNHSGTQMMQSGVGMSQN-MSALGQSTV 515

Query: 149  TSGSGTMIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            +SG+GTMIPTPGMSQQVQ GMQ +GV+N+S A+M L  Q   A+QSA
Sbjct: 516  SSGNGTMIPTPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSA 562


>ref|XP_012463724.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X1 [Gossypium raimondii]
            gi|763813222|gb|KJB80074.1| hypothetical protein
            B456_013G080300 [Gossypium raimondii]
          Length = 845

 Score =  531 bits (1369), Expect = e-148
 Identities = 289/527 (54%), Positives = 369/527 (70%), Gaps = 19/527 (3%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQK + +  EFSLV FN HGSY ACLVQRSGWT++VD+FLQWLSA+ F+GGGF+D AIAE
Sbjct: 42   GQKNSTSNVEFSLVTFNTHGSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAE 101

Query: 1352 GLAEALTMFPVALSGSGT-QNVDVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GL+EAL MFP+A +G+ T QNVD  +HCILV ASNPYPLPTPVY+PQI  +EQ EN+EA 
Sbjct: 102  GLSEALMMFPIASNGNQTPQNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQVENSEAQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TESCL+DAETVA+SF +CS SLSV+ PKQL KL+AIY+AGKRNPRAA+P VDN+KN  FL
Sbjct: 162  TESCLSDAETVARSFAQCSVSLSVICPKQLAKLKAIYSAGKRNPRAADPPVDNVKNSQFL 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMD-TSVPPVCGAPPTSISPANGAHMNRQSV 819
            VL+SE+F E R ALSR+GV ++++NQSP+KMD  SV  V G  P+S+   NG+ + +  V
Sbjct: 222  VLISENFMEGRAALSRSGVPSLATNQSPVKMDMASVTSVMGPSPSSV---NGSMVGKLPV 278

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
            S GN+  ATVKVEP TI S+  GPAF H+PSV     Q IP               T+G+
Sbjct: 279  SVGNVATATVKVEPTTITSMATGPAFSHVPSVPRVPSQAIPTLQTSSPLTNTQEGMTSGD 338

Query: 638  SVHEVKP----------------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPVA 507
            ++ E+KP                              + SA+LTG +S+GL +MG  PVA
Sbjct: 339  NMQELKPSVSGMTQPSRPVPPAAANVNILNNLSQARVMSSAALTGGTSIGLQSMGQTPVA 398

Query: 506  MHMSNVISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASATS 327
            MHMSN+ISSGM SS +P A  V SS Q  +T            +Q+  ++ L TF+SA+S
Sbjct: 399  MHMSNMISSGMASS-VPPAHTVLSSGQPTMT-SLTGSGALTGTAQVPPNSGLSTFSSASS 456

Query: 326  TMSGNSNPGVSQPLNNIQGAVSMGQPVPGMNQGNIPGSQTGQNGIAINQNIMNGLGPS-I 150
             ++GNSN G+SQP  N+QGAV++GQ VPGM+QGN  G+Q  Q+G+ ++QN M+ LG S +
Sbjct: 457  NVAGNSNIGISQPTGNVQGAVNIGQSVPGMSQGNHSGTQMMQSGVGMSQN-MSALGQSTV 515

Query: 149  TSGSGTMIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            +SG+GTMIPTPGMSQQVQ GMQ +GV+N+S A+M L  Q   A+QSA
Sbjct: 516  SSGNGTMIPTPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSA 562


>ref|XP_012463725.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X2 [Gossypium raimondii]
            gi|763813221|gb|KJB80073.1| hypothetical protein
            B456_013G080300 [Gossypium raimondii]
          Length = 822

 Score =  531 bits (1369), Expect = e-148
 Identities = 289/527 (54%), Positives = 369/527 (70%), Gaps = 19/527 (3%)
 Frame = -3

Query: 1532 GQKLAATKAEFSLVVFNAHGSYSACLVQRSGWTRNVDLFLQWLSALSFTGGGFSDVAIAE 1353
            GQK + +  EFSLV FN HGSY ACLVQRSGWT++VD+FLQWLSA+ F+GGGF+D AIAE
Sbjct: 42   GQKNSTSNVEFSLVTFNTHGSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAE 101

Query: 1352 GLAEALTMFPVALSGSGT-QNVDVNKHCILVTASNPYPLPTPVYQPQIPKVEQGENAEAS 1176
            GL+EAL MFP+A +G+ T QNVD  +HCILV ASNPYPLPTPVY+PQI  +EQ EN+EA 
Sbjct: 102  GLSEALMMFPIASNGNQTPQNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQVENSEAQ 161

Query: 1175 TESCLADAETVAKSFPKCSFSLSVVSPKQLPKLRAIYNAGKRNPRAAEPTVDNIKNPYFL 996
            TESCL+DAETVA+SF +CS SLSV+ PKQL KL+AIY+AGKRNPRAA+P VDN+KN  FL
Sbjct: 162  TESCLSDAETVARSFAQCSVSLSVICPKQLAKLKAIYSAGKRNPRAADPPVDNVKNSQFL 221

Query: 995  VLLSESFTEARNALSRTGVTNISSNQSPIKMD-TSVPPVCGAPPTSISPANGAHMNRQSV 819
            VL+SE+F E R ALSR+GV ++++NQSP+KMD  SV  V G  P+S+   NG+ + +  V
Sbjct: 222  VLISENFMEGRAALSRSGVPSLATNQSPVKMDMASVTSVMGPSPSSV---NGSMVGKLPV 278

Query: 818  STGNLPAATVKVEPNTIPSLVPGPAFPHLPSVSNAAPQTIPXXXXXXXXXXXXXXXTNGE 639
            S GN+  ATVKVEP TI S+  GPAF H+PSV     Q IP               T+G+
Sbjct: 279  SVGNVATATVKVEPTTITSMATGPAFSHVPSVPRVPSQAIPTLQTSSPLTNTQEGMTSGD 338

Query: 638  SVHEVKP----------------XXXXXXXXXXXXXXVRSASLTGASSMGLPTMGGAPVA 507
            ++ E+KP                              + SA+LTG +S+GL +MG  PVA
Sbjct: 339  NMQELKPSVSGMTQPSRPVPPAAANVNILNNLSQARVMSSAALTGGTSIGLQSMGQTPVA 398

Query: 506  MHMSNVISSGMVSSALPTAQNVFSSAQSGITXXXXXXXXXXXXSQIAQSTTLGTFASATS 327
            MHMSN+ISSGM SS +P A  V SS Q  +T            +Q+  ++ L TF+SA+S
Sbjct: 399  MHMSNMISSGMASS-VPPAHTVLSSGQPTMT-SLTGSGALTGTAQVPPNSGLSTFSSASS 456

Query: 326  TMSGNSNPGVSQPLNNIQGAVSMGQPVPGMNQGNIPGSQTGQNGIAINQNIMNGLGPS-I 150
             ++GNSN G+SQP  N+QGAV++GQ VPGM+QGN  G+Q  Q+G+ ++QN M+ LG S +
Sbjct: 457  NVAGNSNIGISQPTGNVQGAVNIGQSVPGMSQGNHSGTQMMQSGVGMSQN-MSALGQSTV 515

Query: 149  TSGSGTMIPTPGMSQQVQGGMQPIGVTNTSTANMSLPHQAQGAMQSA 9
            +SG+GTMIPTPGMSQQVQ GMQ +GV+N+S A+M L  Q   A+QSA
Sbjct: 516  SSGNGTMIPTPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSA 562