BLASTX nr result

ID: Aconitum21_contig00027758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00027758
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]    84   9e-15
ref|XP_002299231.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]    79   5e-13

>ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 584

 Score =  124 bits (310), Expect = 1e-26
 Identities = 66/122 (54%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
 Frame = -3

Query: 361 MPYISTLSPLRRQLTTFTHNLEYPSR--QSLSLLQSCKSINELKQIHAQFIRSDQVSNTL 188
           MP+I   S   RQ+TT T   +  +   ++LS LQSCKS  +LK+IHAQ I + Q+ +T 
Sbjct: 1   MPHIPLFSSFWRQITTVTTKFKSKNSNYKTLSALQSCKSTEDLKKIHAQLIITGQIKDTF 60

Query: 187 LATKIVEFCAVFTRNIDYALRVFSQIKQPNAYTWTTMIRGFVQIKIPSKALEFYNLMRSQ 8
           +ATK VE  AV  RNIDYA  VF  I  P++Y+WTTMIRGFV+ K P KALEFY LMR +
Sbjct: 61  IATKTVESYAVSARNIDYAFWVFVGINYPDSYSWTTMIRGFVEAKNPEKALEFYGLMRQR 120

Query: 7   GV 2
           GV
Sbjct: 121 GV 122


>emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
          Length = 516

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
 Frame = -3

Query: 319 TTFTHNLEYPSRQS--LSLLQSCKSINELKQIHAQFIRSDQVSNTLLATKIVEFCAVFT- 149
           TT + N  + SR+   +S+ + C+S+  L+Q+HA  I++    N  +  KI+ FCAV   
Sbjct: 39  TTLSENEGFDSREERVMSVFKQCESMKHLEQLHAHVIQTGLEQNLFVMGKIIVFCAVSEC 98

Query: 148 RNIDYALRVFSQIKQPNAYTWTTMIRGFVQIKIPSKALEFYNLMRSQG 5
            ++DYALRVF +I+ P+ + W TMIRG  + + P KA EFY  M+ +G
Sbjct: 99  GSMDYALRVFGKIENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKG 146


>ref|XP_002299231.1| predicted protein [Populus trichocarpa] gi|222846489|gb|EEE84036.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/102 (37%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
 Frame = -3

Query: 319 TTFTHNLEYPSRQSLSLLQSCKSINELKQIHAQFIRSDQVSNTLLATKIVEFCAVF-TRN 143
           TT T+ L  P    LSLL++CKS ++LKQI AQ I +  + +   +++++ FCA+  +RN
Sbjct: 46  TTHTYVLSNPL---LSLLENCKSFSQLKQIQAQMILTGLILDGFASSRLISFCAISESRN 102

Query: 142 IDYALRVFSQIKQPNAYTWTTMIRGFVQIKIPSKALEFYNLM 17
           +DY +++ + ++ PN ++W  +IRG V+ + P K L  Y  M
Sbjct: 103 LDYCIKILNNLQNPNVFSWNAVIRGCVESENPQKGLVLYKRM 144


>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
 Frame = -3

Query: 280 SLSLLQSCKSINELKQIHAQFIRSDQVSNTLLATKIVEFCAVFT-RNIDYALRVFSQIKQ 104
           SL+LL +CKS   LKQIH+Q I++   +     +K++EFCA+    N+ YAL +F  I+Q
Sbjct: 35  SLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ 94

Query: 103 PNAYTWTTMIRGFVQIKIPSKALEFYNLMRSQGV 2
           PN + W TMIRG      P  A++FY  M   GV
Sbjct: 95  PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGV 128


>emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
 Frame = -3

Query: 280 SLSLLQSCKSINELKQIHAQFIRSDQVSNTLLATKIVEFCAVFT-RNIDYALRVFSQIKQ 104
           SL+LL +CKS   LKQIH+Q I++   +     +K++EFCA+    N+ YAL +F  I+Q
Sbjct: 35  SLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ 94

Query: 103 PNAYTWTTMIRGFVQIKIPSKALEFYNLMRSQGV 2
           PN + W TMIRG      P  A++FY  M   GV
Sbjct: 95  PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGV 128


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