BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00027676
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   207   9e-52
ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-50
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi...   200   9e-50
ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
ref|NP_180537.1| pentatricopeptide repeat-containing protein [Ar...   174   7e-42

>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  207 bits (526), Expect = 9e-52
 Identities = 100/137 (72%), Positives = 112/137 (81%)
 Frame = +3

Query: 3   VYVKKQGFKLNCHLTTSLIDMYAKCGDLDKALEVFRSSEKKDVYAWSAMIAGLAMHGRGR 182
           VY+KKQG KLNCHLTTSLIDMY KCGDL KAL VF S E+KDV+ WSAMIAGLAMHG G+
Sbjct: 394 VYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGK 453

Query: 183 DALDIFERMHEAKVKPNAVTFTNVLSACSHARLVEESRFHFNRMLPVYGVTPTVKHYASM 362
           DA+ +F +M E KVKPNAVTFTN+L ACSH  LVEE R  FN+M  VYGV P VKHYA M
Sbjct: 454 DAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACM 513

Query: 363 VDVLGRAGLIEEAKKFI 413
           VD+LGRAGL+EEA + I
Sbjct: 514 VDILGRAGLLEEAVELI 530



 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 44/128 (34%), Positives = 71/128 (55%), Gaps = 6/128 (4%)
 Frame = +3

Query: 42  LTTSLIDMYAKCGDLDKALEVFRSSEKKDVYAWSAMIAGLAMHGRGRDALDIFERMHEAK 221
           +  SLI  YAKCG+L     VF +  ++DV +W++MI      G   +AL++F+ M    
Sbjct: 173 ILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQN 232

Query: 222 VKPNAVTFTNVLSACSHARLVEESRFHFNRMLPVY------GVTPTVKHYASMVDVLGRA 383
           VKPN +T   VLSAC+     ++S F F R +  Y      G + T+ +  +M+D+  + 
Sbjct: 233 VKPNGITMVGVLSACA-----KKSDFEFGRWVHSYIERNRIGESLTLSN--AMLDMYTKC 285

Query: 384 GLIEEAKK 407
           G +E+AK+
Sbjct: 286 GSVEDAKR 293



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = +3

Query: 48  TSLIDMYAKCGDLDKALEVFRSSEKKDVYAWSAMIAGLAMHGRGRDALDIFERMHEAK-V 224
           T+++  YAK G+ D A  +F +   +D+ AW+A+I+     G+ ++AL++F  +  +K  
Sbjct: 307 TTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTA 366

Query: 225 KPNAVTFTNVLSACS 269
           KP+ VT  + LSAC+
Sbjct: 367 KPDEVTLVSTLSACA 381


>ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|222850518|gb|EEE88065.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score =  202 bits (515), Expect = 2e-50
 Identities = 96/137 (70%), Positives = 113/137 (82%)
 Frame = +3

Query: 3   VYVKKQGFKLNCHLTTSLIDMYAKCGDLDKALEVFRSSEKKDVYAWSAMIAGLAMHGRGR 182
           VY+KKQG KLN H+TTSLIDMY+KCG L+KALEVF S E++DV+ WSAMIAGLAMHG GR
Sbjct: 389 VYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGR 448

Query: 183 DALDIFERMHEAKVKPNAVTFTNVLSACSHARLVEESRFHFNRMLPVYGVTPTVKHYASM 362
            A+D+F +M E KVKPNAVTFTN+L ACSH+ LV+E R  FN+M PVYGV P  KHYA M
Sbjct: 449 AAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACM 508

Query: 363 VDVLGRAGLIEEAKKFI 413
           VD+LGRAG +EEA + I
Sbjct: 509 VDILGRAGCLEEAVELI 525



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 43/133 (32%), Positives = 72/133 (54%)
 Frame = +3

Query: 9   VKKQGFKLNCHLTTSLIDMYAKCGDLDKALEVFRSSEKKDVYAWSAMIAGLAMHGRGRDA 188
           V K  F  +  ++ SLI  Y+  GDLD A  VF    +KD+ +W++MI+G    G   +A
Sbjct: 157 VMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEA 216

Query: 189 LDIFERMHEAKVKPNAVTFTNVLSACSHARLVEESRFHFNRMLPVYGVTPTVKHYASMVD 368
           L +F+RM     +PN VT   VLSAC+    +E  R+  +  +   G+   +    +M+D
Sbjct: 217 LQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACD-YIERNGIDINLILSNAMLD 275

Query: 369 VLGRAGLIEEAKK 407
           +  + G +E+A++
Sbjct: 276 MYVKCGSLEDARR 288



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
 Frame = +3

Query: 48  TSLIDMYAKCGDLDKALEVFRSSEKKDVYAWSAMIAGLAMHGRGRDALDIFERMHEAK-V 224
           T++ID YAK GD D A  VF    ++D+ AW+A+I+    +G+ ++AL IF  +   K  
Sbjct: 302 TTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNT 361

Query: 225 KPNAVTFTNVLSACSHARLVEESRFHFNRMLPVYGVTPTVKHYASMVDVLGRAGLIEEA 401
           KPN VT  + L+AC+    ++   +  +  +   G+        S++D+  + G +E+A
Sbjct: 362 KPNEVTLASTLAACAQLGAMDLGGW-IHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKA 419


>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449470513|ref|XP_004152961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449523079|ref|XP_004168552.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  200 bits (509), Expect = 9e-50
 Identities = 94/137 (68%), Positives = 112/137 (81%)
 Frame = +3

Query: 3   VYVKKQGFKLNCHLTTSLIDMYAKCGDLDKALEVFRSSEKKDVYAWSAMIAGLAMHGRGR 182
           VY+K++G  LNCHL +SL+DMYAKCG L+KALEVF S E++DVY WSAMIAGL MHGRG+
Sbjct: 384 VYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGK 443

Query: 183 DALDIFERMHEAKVKPNAVTFTNVLSACSHARLVEESRFHFNRMLPVYGVTPTVKHYASM 362
            A+D+F  M EAKVKPN+VTFTNVL ACSHA LV+E R  F+ M PVYGV P +KHYA M
Sbjct: 444 AAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACM 503

Query: 363 VDVLGRAGLIEEAKKFI 413
           VD+LGRAG +EEA + I
Sbjct: 504 VDILGRAGFLEEAMELI 520



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/131 (31%), Positives = 71/131 (54%)
 Frame = +3

Query: 15  KQGFKLNCHLTTSLIDMYAKCGDLDKALEVFRSSEKKDVYAWSAMIAGLAMHGRGRDALD 194
           K  F ++ ++  SL+  Y  CGDL  A  +F+    KDV +W++MI+  A      DAL+
Sbjct: 154 KLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALE 213

Query: 195 IFERMHEAKVKPNAVTFTNVLSACSHARLVEESRFHFNRMLPVYGVTPTVKHYASMVDVL 374
           +F +M    V PN+VT   VLSAC+    +E  R+  +  +   G+   +    +M+D+ 
Sbjct: 214 LFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCS-YIERKGIKVDLTLCNAMLDMY 272

Query: 375 GRAGLIEEAKK 407
            + G +++A+K
Sbjct: 273 TKCGSVDDAQK 283



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
 Frame = +3

Query: 48  TSLIDMYAKCGDLDKALEVFRSSEKKDVYAWSAMIAGLAMHGRGRDALDIFERMHEAKV- 224
           T ++D YAK GD D A  VF +   K++ AW+ +I+    +G+ ++AL IF  +  +K+ 
Sbjct: 297 TIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIA 356

Query: 225 KPNAVTFTNVLSACSHARLVEESRFHFNRMLPVYGVTPTVKHYASMVDVLGRAGLIEEA 401
           KP+ VT  + LSAC+    ++   +  +  +   G+       +S+VD+  + G +E+A
Sbjct: 357 KPDEVTLVSTLSACAQLGAIDLGGW-IHVYIKREGIVLNCHLISSLVDMYAKCGSLEKA 414


>ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  182 bits (462), Expect = 2e-44
 Identities = 83/137 (60%), Positives = 106/137 (77%)
 Frame = +3

Query: 3   VYVKKQGFKLNCHLTTSLIDMYAKCGDLDKALEVFRSSEKKDVYAWSAMIAGLAMHGRGR 182
           VY+KK    LNCHL TSL+DMYAKCG+L+KA+EVF + E+KDVY WSAMI  LAM+G+G+
Sbjct: 431 VYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGK 490

Query: 183 DALDIFERMHEAKVKPNAVTFTNVLSACSHARLVEESRFHFNRMLPVYGVTPTVKHYASM 362
            ALD+F  M EA +KPNAVTFTN+L AC+HA LV E    F +M P+YG+ P ++HY  +
Sbjct: 491 AALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCV 550

Query: 363 VDVLGRAGLIEEAKKFI 413
           VD+ GRAGL+E+A  FI
Sbjct: 551 VDIFGRAGLLEKAASFI 567



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
 Frame = +3

Query: 9   VKKQGFKLNCHLTTSLIDMYAKCGDLDKALEVFRSSEKKDVYAWSAMIAGLAMHGRGRDA 188
           V K     +  +  SLI+ Y   G  D A  VF +   KDV +W+AMI   A+ G    A
Sbjct: 199 VIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKA 258

Query: 189 LDIFERMHEAKVKPNAVTFTNVLSACSHARLVEESRFHFNRMLPVY----GVTPTVKHYA 356
           L +F+ M    VKPN +T  +VLSAC+     ++    F R +  Y    G T  +    
Sbjct: 259 LLLFQEMEMKDVKPNVITMVSVLSACA-----KKIDLEFGRWICSYIENNGFTEHLILNN 313

Query: 357 SMVDVLGRAGLIEEAK 404
           +M+D+  + G I +AK
Sbjct: 314 AMLDMYVKCGCINDAK 329


>ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75100656|sp|O82380.1|PP175_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
           gi|3582328|gb|AAC35225.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253207|gb|AEC08301.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 738

 Score =  174 bits (441), Expect = 7e-42
 Identities = 81/136 (59%), Positives = 105/136 (77%)
 Frame = +3

Query: 6   YVKKQGFKLNCHLTTSLIDMYAKCGDLDKALEVFRSSEKKDVYAWSAMIAGLAMHGRGRD 185
           Y+KK G ++N H+T++LI MY+KCGDL+K+ EVF S EK+DV+ WSAMI GLAMHG G +
Sbjct: 390 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNE 449

Query: 186 ALDIFERMHEAKVKPNAVTFTNVLSACSHARLVEESRFHFNRMLPVYGVTPTVKHYASMV 365
           A+D+F +M EA VKPN VTFTNV  ACSH  LV+E+   F++M   YG+ P  KHYA +V
Sbjct: 450 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIV 509

Query: 366 DVLGRAGLIEEAKKFI 413
           DVLGR+G +E+A KFI
Sbjct: 510 DVLGRSGYLEKAVKFI 525



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
 Frame = +3

Query: 42  LTTSLIDMYAKCGDLDKALEVFRSSEKKDVYAWSAMIAGLAMHGRGRDALDIFERMHEAK 221
           +  SLI  Y  CGDLD A +VF + ++KDV +W++MI G    G    AL++F++M    
Sbjct: 168 VANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED 227

Query: 222 VKPNAVTFTNVLSACSHARLVEESRFHFNRMLPVY----GVTPTVKHYASMVDVLGRAGL 389
           VK + VT   VLSAC+  R +E     F R +  Y     V   +    +M+D+  + G 
Sbjct: 228 VKASHVTMVGVLSACAKIRNLE-----FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS 282

Query: 390 IEEAKK 407
           IE+AK+
Sbjct: 283 IEDAKR 288