BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00027658
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523650.1| PREDICTED: pentatricopeptide repeat-containi...   212   3e-53
ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containi...   209   2e-52
emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]   209   2e-52
ref|XP_002516112.1| pentatricopeptide repeat-containing protein,...   194   5e-48
ref|XP_003528209.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   194   6e-48

>ref|XP_003523650.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 472

 Score =  212 bits (539), Expect = 3e-53
 Identities = 99/161 (61%), Positives = 128/161 (79%)
 Frame = -3

Query: 487 NGLKDDVATHTNLLKGLCILGRSEDAAKHFKDMVSLGLKPDVKAYGVVVNEHCKLRQPNE 308
           NGLKDDVAT+T+LLKG CI+G+S++A KH ++MVS G+KPDVKAYGVVVNE+CK+R+P+E
Sbjct: 249 NGLKDDVATNTSLLKGFCIVGKSDEAVKHLREMVSRGMKPDVKAYGVVVNEYCKIRKPSE 308

Query: 307 AIALLDEMKSKGLSPSISSFNALFRMLCDLGEHDRAILYLKRMSYRGCIPNFLSYSTIIC 128
           A+ LL EM  +G+ P++SSFNA+FR+L D G+ D  +  LK+M   GC PNFLSY T+IC
Sbjct: 309 AVLLLREMVVRGVKPNVSSFNAVFRVLVDEGKIDEGLHLLKQMPKMGCSPNFLSYCTVIC 368

Query: 127 SLCSVGGRMRDVEELVVHMLREGHQPDIGMYNGMVRGYCED 5
            LC V GRM+ VEELV +ML+ GH  D  MYN ++ GYCED
Sbjct: 369 GLCEVKGRMQQVEELVSNMLQNGHNLDATMYNCLLLGYCED 409


>ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Vitis vinifera]
          Length = 563

 Score =  209 bits (531), Expect = 2e-52
 Identities = 96/162 (59%), Positives = 129/162 (79%)
 Frame = -3

Query: 487 NGLKDDVATHTNLLKGLCILGRSEDAAKHFKDMVSLGLKPDVKAYGVVVNEHCKLRQPNE 308
           NGLKD+VATHT++LKGLC++G+ +DAA+H K+MV LG++ D KAYGVVVNE+CK+ + ++
Sbjct: 301 NGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADD 360

Query: 307 AIALLDEMKSKGLSPSISSFNALFRMLCDLGEHDRAILYLKRMSYRGCIPNFLSYSTIIC 128
           AI+LL EMKS+G++PS+SSFNA+FR+L + G+ D+A L L++M   GC PNFLSYST+I 
Sbjct: 361 AISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVID 420

Query: 127 SLCSVGGRMRDVEELVVHMLREGHQPDIGMYNGMVRGYCEDG 2
            LC   GRM +VEE V  M R GH  D  MY+ +V+GYCEDG
Sbjct: 421 GLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDG 462


>emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score =  209 bits (531), Expect = 2e-52
 Identities = 96/162 (59%), Positives = 129/162 (79%)
 Frame = -3

Query: 487 NGLKDDVATHTNLLKGLCILGRSEDAAKHFKDMVSLGLKPDVKAYGVVVNEHCKLRQPNE 308
           NGLKD+VATHT++LKGLC++G+ +DAA+H K+MV LG++ D KAYGVVVNE+CK+ + ++
Sbjct: 385 NGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADD 444

Query: 307 AIALLDEMKSKGLSPSISSFNALFRMLCDLGEHDRAILYLKRMSYRGCIPNFLSYSTIIC 128
           AI+LL EMKS+G++PS+SSFNA+FR+L + G+ D+A L L++M   GC PNFLSYST+I 
Sbjct: 445 AISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVID 504

Query: 127 SLCSVGGRMRDVEELVVHMLREGHQPDIGMYNGMVRGYCEDG 2
            LC   GRM +VEE V  M R GH  D  MY+ +V+GYCEDG
Sbjct: 505 GLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDG 546



 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/161 (28%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
 Frame = -3

Query: 481 LKDDVATHTNLLKGLCILGRSEDAAKHFKDMVSLGLKPDVKAYGVVVNEHCKLRQPNEAI 302
           +K DV+T+T +++G C +G  E+A   F +M   G KP++  Y  ++N  CK      A+
Sbjct: 249 VKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESAM 305

Query: 301 ALLDEM-KSKGLSPSISSFNALFRMLCDLGEHDRAILYLKRMSYRGCIPNFLSYSTIICS 125
            ++D+M +++   P   ++  L    C  GE + A+ Y++ M  R C PN L+Y+ II  
Sbjct: 306 KIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYG 365

Query: 124 LCSVGGRMRDVEELVVHMLREGHQPDIGMYNGMVRGYCEDG 2
           LC + G + + + ++  M   G + ++  +  +++G C  G
Sbjct: 366 LC-LNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVG 405



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/157 (27%), Positives = 77/157 (49%)
 Frame = -3

Query: 472 DVATHTNLLKGLCILGRSEDAAKHFKDMVSLGLKPDVKAYGVVVNEHCKLRQPNEAIALL 293
           D  T+T L+ G C  G  E+A K+ ++MVS   +P+V  Y  ++   C     +EA  ++
Sbjct: 320 DTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMM 379

Query: 292 DEMKSKGLSPSISSFNALFRMLCDLGEHDRAILYLKRMSYRGCIPNFLSYSTIICSLCSV 113
             M+  GL  ++++  ++ + LC +G+ D A  +LK M   G   +  +Y  ++   C +
Sbjct: 380 TRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKI 439

Query: 112 GGRMRDVEELVVHMLREGHQPDIGMYNGMVRGYCEDG 2
            G+  D   L+  M   G  P +  +N + R   E G
Sbjct: 440 -GKADDAISLLKEMKSRGINPSVSSFNAVFRILVESG 475



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 1/162 (0%)
 Frame = -3

Query: 484 GLKDDVATHTNLLKGLCILGRSEDAAKHFKDMVSL-GLKPDVKAYGVVVNEHCKLRQPNE 308
           G K ++ T+  ++ G C  G  E A K    M       PD   Y  +++ +CK  +  E
Sbjct: 280 GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEE 339

Query: 307 AIALLDEMKSKGLSPSISSFNALFRMLCDLGEHDRAILYLKRMSYRGCIPNFLSYSTIIC 128
           A+  ++EM S+   P++ ++NA+   LC  G  D A   + RM   G   N  ++++I+ 
Sbjct: 340 AMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILK 399

Query: 127 SLCSVGGRMRDVEELVVHMLREGHQPDIGMYNGMVRGYCEDG 2
            LC V G++ D    +  M+  G + D   Y  +V  YC+ G
Sbjct: 400 GLCVV-GKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIG 440


>ref|XP_002516112.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544598|gb|EEF46114.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 461

 Score =  194 bits (494), Expect = 5e-48
 Identities = 90/162 (55%), Positives = 126/162 (77%)
 Frame = -3

Query: 487 NGLKDDVATHTNLLKGLCILGRSEDAAKHFKDMVSLGLKPDVKAYGVVVNEHCKLRQPNE 308
           NGLK+++ATH ++LKGLC  G+S++A  +FK+M+  G+K DVKAY VV+NE+CK+++PNE
Sbjct: 225 NGLKENLATHMSILKGLCYAGKSDEAVNYFKEMIRKGMKCDVKAYAVVINEYCKMKKPNE 284

Query: 307 AIALLDEMKSKGLSPSISSFNALFRMLCDLGEHDRAILYLKRMSYRGCIPNFLSYSTIIC 128
           AIALL EMK+KG++PS+SSFNA+ ++L  LGE D AI  LK+M   GC PNF+SY+ +I 
Sbjct: 285 AIALLKEMKAKGINPSVSSFNAVIQILMKLGEPDAAIFLLKQMQGMGCRPNFISYNIVIG 344

Query: 127 SLCSVGGRMRDVEELVVHMLREGHQPDIGMYNGMVRGYCEDG 2
            LC   GRM++V+EL+ +ML  G   D  MY+ +V+GYCEDG
Sbjct: 345 GLCGAKGRMQNVKELLHNMLCSGLAVDATMYSSLVKGYCEDG 386



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 19/146 (13%)
 Frame = -3

Query: 400 FKDMVSLGLKPDVKAYGVVVNEHCKLR--------------QPN-----EAIALLDEMKS 278
           F +MV++  KPDV  Y +++  + K+R              +PN     EA  L+ EM+ 
Sbjct: 167 FDEMVAV--KPDVSTYAIMIKGYWKMRSVENASKLFDEMSCEPNLGNVDEARKLMTEMRL 224

Query: 277 KGLSPSISSFNALFRMLCDLGEHDRAILYLKRMSYRGCIPNFLSYSTIICSLCSVGGRMR 98
            GL  ++++  ++ + LC  G+ D A+ Y K M  +G   +  +Y+ +I   C +  +  
Sbjct: 225 NGLKENLATHMSILKGLCYAGKSDEAVNYFKEMIRKGMKCDVKAYAVVINEYCKM-KKPN 283

Query: 97  DVEELVVHMLREGHQPDIGMYNGMVR 20
           +   L+  M  +G  P +  +N +++
Sbjct: 284 EAIALLKEMKAKGINPSVSSFNAVIQ 309


>ref|XP_003528209.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g09900-like [Glycine max]
          Length = 345

 Score =  194 bits (493), Expect = 6e-48
 Identities = 92/163 (56%), Positives = 122/163 (74%), Gaps = 1/163 (0%)
 Frame = -3

Query: 487 NGLKDDVATHTNLLKGLCILGRSEDAAKHFKDMVSLGLKPDVKAYGVVV-NEHCKLRQPN 311
           NGLK+DVA +T+L KG CI+G S++  +H ++MVS G++PDVKAY VVV NE+CK+R+P+
Sbjct: 172 NGLKEDVANNTSLSKGFCIMGNSDETVEHLREMVSRGMRPDVKAYRVVVVNEYCKIRKPS 231

Query: 310 EAIALLDEMKSKGLSPSISSFNALFRMLCDLGEHDRAILYLKRMSYRGCIPNFLSYSTII 131
           EA+ LL EM  +G  PS+SSFNA+FR+L D G+ D+ +L LK+M   GC PNFL Y T+I
Sbjct: 232 EAVLLLREMVVRGFKPSMSSFNAVFRVLVDEGKLDKRVLLLKQMPKMGCSPNFLFYCTVI 291

Query: 130 CSLCSVGGRMRDVEELVVHMLREGHQPDIGMYNGMVRGYCEDG 2
           C LC V GRM+ VEEL+  ML+  H  D  MYN ++ GYCEDG
Sbjct: 292 CGLCKVNGRMQQVEELIPDMLQNRHNLDATMYNCLLAGYCEDG 334