BLASTX nr result

ID: Aconitum21_contig00027548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00027548
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   231   6e-59
ref|XP_004168093.1| PREDICTED: DNA polymerase theta-like, partia...   227   9e-58
ref|XP_004138885.1| PREDICTED: DNA polymerase theta-like [Cucumi...   227   9e-58
ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp....   223   1e-56
ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis th...   223   1e-56

>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
            vinifera]
          Length = 2181

 Score =  231 bits (588), Expect = 6e-59
 Identities = 112/135 (82%), Positives = 119/135 (88%)
 Frame = +1

Query: 1    LNDSCPPLQSCLSEDKNGMIHAILEVVAGGIVQTAGDINRYVRCTLLNSTKPFEEVVKSA 180
            LN+SCPPL SCLSEDKNGM HAILEVVA GIVQTA DINRYVRCTLLNSTKPF++VVKSA
Sbjct: 940  LNESCPPLYSCLSEDKNGMTHAILEVVASGIVQTANDINRYVRCTLLNSTKPFQDVVKSA 999

Query: 181  QDSLRWLCHRKFVEWNEETKMYSTTPLGRASFGXXXXXXXXXXXXDDLSRAREGFVLASD 360
            QDSLRWLCHRKF+EWNE+TK+YSTTPLGRA+FG            DDLSRAREGFVLASD
Sbjct: 1000 QDSLRWLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLVVLDDLSRAREGFVLASD 1059

Query: 361  LHLVYLVTPINVDVE 405
            LHLVYLVTPINVDVE
Sbjct: 1060 LHLVYLVTPINVDVE 1074


>ref|XP_004168093.1| PREDICTED: DNA polymerase theta-like, partial [Cucumis sativus]
          Length = 1607

 Score =  227 bits (578), Expect = 9e-58
 Identities = 111/135 (82%), Positives = 119/135 (88%)
 Frame = +1

Query: 1   LNDSCPPLQSCLSEDKNGMIHAILEVVAGGIVQTAGDINRYVRCTLLNSTKPFEEVVKSA 180
           LN+SCPPLQSCLSEDKNGM HAILEVVAGGIVQTA DI+RYVRCTLLNSTKPF++VVKSA
Sbjct: 390 LNESCPPLQSCLSEDKNGMTHAILEVVAGGIVQTATDIHRYVRCTLLNSTKPFQDVVKSA 449

Query: 181 QDSLRWLCHRKFVEWNEETKMYSTTPLGRASFGXXXXXXXXXXXXDDLSRAREGFVLASD 360
           Q+SLRWLCH KF+EWN +TK+YSTTPLGRASFG            DDLSRAREGFVLASD
Sbjct: 450 QESLRWLCHGKFLEWNGDTKLYSTTPLGRASFGSSLSPEESLIVLDDLSRAREGFVLASD 509

Query: 361 LHLVYLVTPINVDVE 405
           LHLVYLVTPINVDVE
Sbjct: 510 LHLVYLVTPINVDVE 524


>ref|XP_004138885.1| PREDICTED: DNA polymerase theta-like [Cucumis sativus]
          Length = 2144

 Score =  227 bits (578), Expect = 9e-58
 Identities = 111/135 (82%), Positives = 119/135 (88%)
 Frame = +1

Query: 1    LNDSCPPLQSCLSEDKNGMIHAILEVVAGGIVQTAGDINRYVRCTLLNSTKPFEEVVKSA 180
            LN+SCPPLQSCLSEDKNGM HAILEVVAGGIVQTA DI+RYVRCTLLNSTKPF++VVKSA
Sbjct: 927  LNESCPPLQSCLSEDKNGMTHAILEVVAGGIVQTATDIHRYVRCTLLNSTKPFQDVVKSA 986

Query: 181  QDSLRWLCHRKFVEWNEETKMYSTTPLGRASFGXXXXXXXXXXXXDDLSRAREGFVLASD 360
            Q+SLRWLCH KF+EWN +TK+YSTTPLGRASFG            DDLSRAREGFVLASD
Sbjct: 987  QESLRWLCHGKFLEWNGDTKLYSTTPLGRASFGSSLSPEESLIVLDDLSRAREGFVLASD 1046

Query: 361  LHLVYLVTPINVDVE 405
            LHLVYLVTPINVDVE
Sbjct: 1047 LHLVYLVTPINVDVE 1061


>ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297315090|gb|EFH45513.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 2147

 Score =  223 bits (568), Expect = 1e-56
 Identities = 108/135 (80%), Positives = 117/135 (86%)
 Frame = +1

Query: 1    LNDSCPPLQSCLSEDKNGMIHAILEVVAGGIVQTAGDINRYVRCTLLNSTKPFEEVVKSA 180
            LN++CPPLQSCLSEDKNGM HAILEVVAGGIVQTA DI+RYVRCTLLNSTKPF++VVKSA
Sbjct: 930  LNETCPPLQSCLSEDKNGMTHAILEVVAGGIVQTAKDIHRYVRCTLLNSTKPFQDVVKSA 989

Query: 181  QDSLRWLCHRKFVEWNEETKMYSTTPLGRASFGXXXXXXXXXXXXDDLSRAREGFVLASD 360
            QDSLRWLCHRKF+EWNEETK+Y+TTPLGR SFG            DDL RAREG V+ASD
Sbjct: 990  QDSLRWLCHRKFLEWNEETKLYTTTPLGRGSFGSSLCPEESLIVLDDLLRAREGLVMASD 1049

Query: 361  LHLVYLVTPINVDVE 405
            LHLVYLVTPINV VE
Sbjct: 1050 LHLVYLVTPINVGVE 1064


>ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis thaliana]
            gi|62241195|dbj|BAD93700.1| helicase and polymerase
            containing protein TEBICHI [Arabidopsis thaliana]
            gi|332660705|gb|AEE86105.1| DNA polymerase theta subunit
            [Arabidopsis thaliana]
          Length = 2154

 Score =  223 bits (568), Expect = 1e-56
 Identities = 108/135 (80%), Positives = 117/135 (86%)
 Frame = +1

Query: 1    LNDSCPPLQSCLSEDKNGMIHAILEVVAGGIVQTAGDINRYVRCTLLNSTKPFEEVVKSA 180
            LN++CPPLQSCLSEDKNGM HAILEVVAGGIVQTA DI+RYVRCTLLNSTKPF++VVKSA
Sbjct: 931  LNETCPPLQSCLSEDKNGMTHAILEVVAGGIVQTAKDIHRYVRCTLLNSTKPFQDVVKSA 990

Query: 181  QDSLRWLCHRKFVEWNEETKMYSTTPLGRASFGXXXXXXXXXXXXDDLSRAREGFVLASD 360
            QDSLRWLCHRKF+EWNEETK+Y+TTPLGR SFG            DDL RAREG V+ASD
Sbjct: 991  QDSLRWLCHRKFLEWNEETKLYTTTPLGRGSFGSSLCPEESLIVLDDLLRAREGLVMASD 1050

Query: 361  LHLVYLVTPINVDVE 405
            LHLVYLVTPINV VE
Sbjct: 1051 LHLVYLVTPINVGVE 1065


Top