BLASTX nr result

ID: Aconitum21_contig00027517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00027517
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517119.1| conserved hypothetical protein [Ricinus comm...    55   1e-06
emb|CBI26272.3| unnamed protein product [Vitis vinifera]               54   4e-06
ref|XP_002278782.1| PREDICTED: uncharacterized protein LOC100259...    54   4e-06

>ref|XP_002517119.1| conserved hypothetical protein [Ricinus communis]
           gi|223543754|gb|EEF45282.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 362

 Score = 55.5 bits (132), Expect(2) = 1e-06
 Identities = 27/67 (40%), Positives = 40/67 (59%)
 Frame = -3

Query: 362 VHGRLSSSVVQMDPNTWFLEHAHNPVLGNSRLSFAVVEYMKFWISKLAAELKLRFSVIFE 183
           +H +  SSVVQ+DP+TW LE+  + +L  S  S AV E   FWIS++   +K  F   F 
Sbjct: 285 IHKKWGSSVVQLDPSTWVLEYGRSSILDYSSFSSAVAELFNFWISRVMTRMKQEF-WFFS 343

Query: 182 LVEGENS 162
           ++E + S
Sbjct: 344 VLEDQYS 350



 Score = 21.9 bits (45), Expect(2) = 1e-06
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 405 NGRAGFVVRNANSS 364
           +GR G+ +R ANSS
Sbjct: 270 DGRTGYSIRKANSS 283


>emb|CBI26272.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score = 53.9 bits (128), Expect(2) = 4e-06
 Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
 Frame = -3

Query: 359 HGRLSSSVVQMDPNTWFLEHAHNPVLGNSRLSFAVVEYMKFWISKLAAELKLRFSV--IF 186
           H + S+SVVQ+DPNT  LE+  + +L +SRL  A +E+++FW+ ++   +K  F V  +F
Sbjct: 298 HKKWSASVVQLDPNTLVLEYRRSSILESSRLFSAALEFLRFWMCRMVERMKQEFWVLSVF 357

Query: 185 EL 180
           E+
Sbjct: 358 EI 359



 Score = 21.6 bits (44), Expect(2) = 4e-06
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 408 PNGRAGFVVRNANSSCTWK 352
           P+GR   ++R ANSS T K
Sbjct: 281 PDGRIRNLLRKANSSWTHK 299


>ref|XP_002278782.1| PREDICTED: uncharacterized protein LOC100259691 [Vitis vinifera]
          Length = 363

 Score = 53.9 bits (128), Expect(2) = 4e-06
 Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
 Frame = -3

Query: 359 HGRLSSSVVQMDPNTWFLEHAHNPVLGNSRLSFAVVEYMKFWISKLAAELKLRFSV--IF 186
           H + S+SVVQ+DPNT  LE+  + +L +SRL  A +E+++FW+ ++   +K  F V  +F
Sbjct: 287 HKKWSASVVQLDPNTLVLEYRRSSILESSRLFSAALEFLRFWMCRMVERMKQEFWVLSVF 346

Query: 185 EL 180
           E+
Sbjct: 347 EI 348



 Score = 21.6 bits (44), Expect(2) = 4e-06
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 408 PNGRAGFVVRNANSSCTWK 352
           P+GR   ++R ANSS T K
Sbjct: 270 PDGRIRNLLRKANSSWTHK 288


Top