BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00027516
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                147   9e-34
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              144   6e-33
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]                    143   1e-32
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|...   143   1e-32
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]                    143   1e-32

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  147 bits (371), Expect = 9e-34
 Identities = 68/124 (54%), Positives = 97/124 (78%)
 Frame = +2

Query: 2    WSSKKQSTVARSSTESEYRTLASTSAELTWLCALMKDLGIFLHHPPILWCDNISAISLAY 181
            WS+KKQ+TVARSSTE+EYR+LA+T+AE+TW+C ++ D+   L   P+++CDN S I+LA+
Sbjct: 1529 WSAKKQATVARSSTEAEYRSLANTAAEITWVCKILHDISFPLLKTPVIYCDNKSVIALAF 1588

Query: 182  NPVFHARTKHVAVDFHYVRELVSLGLLVIKYIPTQEQTADVFTKGLSPVKFKNIVSKLSV 361
            NPVFHARTKHV +D+HY+RE V LG + ++++ +  Q AD+FTK L+  +F  + SKLSV
Sbjct: 1589 NPVFHARTKHVEIDYHYIREKVLLGHIGVQHVASLLQIADIFTKPLAADRFAALTSKLSV 1648

Query: 362  FSTS 373
             S S
Sbjct: 1649 RSPS 1652


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/119 (60%), Positives = 91/119 (76%)
 Frame = +2

Query: 5    SSKKQSTVARSSTESEYRTLASTSAELTWLCALMKDLGIFLHHPPILWCDNISAISLAYN 184
            SSKK  TV+RSS E+EYR LA T+AEL+WL +L +DL +FL  P I WCDNIS+ISLA N
Sbjct: 1248 SSKKHKTVSRSSAEAEYRQLAYTAAELSWLRSLFRDLNVFLSCPRI-WCDNISSISLASN 1306

Query: 185  PVFHARTKHVAVDFHYVRELVSLGLLVIKYIPTQEQTADVFTKGLSPVKFKNIVSKLSV 361
            PVFH+RTKH+ VD+HYVR+ V    L + Y+ T +QTAD+FTKGLS  +F+ + SKL V
Sbjct: 1307 PVFHSRTKHIEVDYHYVRDKVVRQELAVSYVSTADQTADIFTKGLSTQRFQFLASKLPV 1365


>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/133 (49%), Positives = 94/133 (70%), Gaps = 1/133 (0%)
 Frame = +2

Query: 2    WSSKKQSTVARSSTESEYRTLASTSAELTWLCALMKDLGIFLHHPPILWCDNISAISLAY 181
            WSSKKQ  V RSSTE+EYR++A+TS+EL W+C+L+ +LGI L HPP+++CDN+ A  L  
Sbjct: 1343 WSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCA 1402

Query: 182  NPVFHARTKHVAVDFHYVRELVSLGLLVIKYIPTQEQTADVFTKGLSPVKFKNIVSKLSV 361
            NPVFH+R KH+A+D+H++R  V  G L + ++ T +Q AD  TK LS V F+N   K+ V
Sbjct: 1403 NPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGV 1462

Query: 362  FST-SA*GGVITV 397
                 + GGV+ +
Sbjct: 1463 IKVPPSCGGVLRI 1475


>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
            polyprotein [Arabidopsis thaliana]
          Length = 1330

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/133 (49%), Positives = 94/133 (70%), Gaps = 1/133 (0%)
 Frame = +2

Query: 2    WSSKKQSTVARSSTESEYRTLASTSAELTWLCALMKDLGIFLHHPPILWCDNISAISLAY 181
            WSSKKQ  V RSSTE+EYR++A+TS+EL W+C+L+ +LGI L HPP+++CDN+ A  L  
Sbjct: 1198 WSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCA 1257

Query: 182  NPVFHARTKHVAVDFHYVRELVSLGLLVIKYIPTQEQTADVFTKGLSPVKFKNIVSKLSV 361
            NPVFH+R KH+A+D+H++R  V  G L + ++ T +Q AD  TK LS V F+N   K+ V
Sbjct: 1258 NPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGV 1317

Query: 362  FST-SA*GGVITV 397
                 + GGV+ +
Sbjct: 1318 IKVPPSCGGVLRI 1330


>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/133 (49%), Positives = 94/133 (70%), Gaps = 1/133 (0%)
 Frame = +2

Query: 2    WSSKKQSTVARSSTESEYRTLASTSAELTWLCALMKDLGIFLHHPPILWCDNISAISLAY 181
            WSSKKQ  V RSSTE+EYR++A+TS+EL W+C+L+ +LGI L HPP+++CDN+ A  L  
Sbjct: 1343 WSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCA 1402

Query: 182  NPVFHARTKHVAVDFHYVRELVSLGLLVIKYIPTQEQTADVFTKGLSPVKFKNIVSKLSV 361
            NPVFH+R KH+A+D+H++R  V  G L + ++ T +Q AD  TK LS V F+N   K+ V
Sbjct: 1403 NPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGV 1462

Query: 362  FST-SA*GGVITV 397
                 + GGV+ +
Sbjct: 1463 IKVPPSCGGVLRI 1475