BLASTX nr result

ID: Aconitum21_contig00027356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00027356
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64769.1| hypothetical protein VITISV_010312 [Vitis vinifera]    85   5e-15
ref|XP_002514759.1| conserved hypothetical protein [Ricinus comm...    67   1e-09
ref|XP_002312244.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09

>emb|CAN64769.1| hypothetical protein VITISV_010312 [Vitis vinifera]
          Length = 94

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 10/87 (11%)
 Frame = +2

Query: 44  RVFVLLVCISVLVGLPNRVSGLRSIDIVLRWEEEEG-LETKNSRVL---------RENEL 193
           RV V L+CI VL   P++VSGLRSID+VLR  +E+  L  KN R+L         RE   
Sbjct: 7   RVLVFLICIGVLAVEPDKVSGLRSIDLVLRQSQEDHMLAPKNQRILKAVVVEDLNREENA 66

Query: 194 APTPSTFDAYQSSKRRVRRGSDPIHNR 274
           AP    FD  QSSKRRVRRGSDPIHNR
Sbjct: 67  APVNKKFDLNQSSKRRVRRGSDPIHNR 93


>ref|XP_002514759.1| conserved hypothetical protein [Ricinus communis]
           gi|223546363|gb|EEF47865.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 47/102 (46%), Positives = 58/102 (56%), Gaps = 14/102 (13%)
 Frame = +2

Query: 11  LVSAETMT----LCSRVFVLLVCISVLVGLPNRVSGLRSIDIVLRWEEEEGLETKNSRVL 178
           LV   T+T    L  R F+LL+CI  L   P +VS L SID+ LR ++E     +NSR+L
Sbjct: 24  LVMVWTLTNMGFLVHRGFLLLLCIGYLSFQPEKVSSLTSIDLALRLKQELLPVAQNSRML 83

Query: 179 RENEL---------APTPS-TFDAYQSSKRRVRRGSDPIHNR 274
               L         AP PS  FD  QS+KR VR+GSDPIHNR
Sbjct: 84  TTVALDDLQTFTSSAPAPSMVFDPNQSNKRTVRKGSDPIHNR 125


>ref|XP_002312244.1| predicted protein [Populus trichocarpa] gi|222852064|gb|EEE89611.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 10/92 (10%)
 Frame = +2

Query: 29  MTLCS-RVFVLLVCISVLVGLPNRVSGLRSIDIVLRWEEE-EGLETKNSRVLRENEL--- 193
           M  C+ RV +LL+CI  +   P+ V GL S+++VLR  ++ +G   ++ RVL++ ++   
Sbjct: 1   MVFCAHRVLILLICIGFIAVQPDEVYGLTSVELVLRHNQKAQGTAPQSQRVLKDVDMQGM 60

Query: 194 -----APTPSTFDAYQSSKRRVRRGSDPIHNR 274
                A    TFD  QS+KRR  RGSDPIHNR
Sbjct: 61  DTKKSAHASKTFDRSQSNKRRAPRGSDPIHNR 92


Top