BLASTX nr result

ID: Aconitum21_contig00027237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00027237
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28171.3| unnamed protein product [Vitis vinifera]              192   2e-47
ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containin...   183   2e-44
ref|XP_002524463.1| nucleic acid binding protein, putative [Rici...   180   2e-43
ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containin...   179   3e-43
emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]   179   3e-43

>emb|CBI28171.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score =  192 bits (489), Expect = 2e-47
 Identities = 87/147 (59%), Positives = 105/147 (71%), Gaps = 3/147 (2%)
 Frame = -1

Query: 442 MEDELHKRYTDCVDFLASPLTCKKGIECEFRHNEIARLNPRECWYWLGGNCFNPTCGFRH 263
           MEDEL KR TDCV FLASPLTCKKG++CE+RH+E ARLNPR+CWYWL G+C NP C FRH
Sbjct: 1   MEDELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRH 60

Query: 262 PPLEGFPGNSSEPASLPHQASVPVSKSNVPCYFYFNGFCNKGDSCSFLHGRNS---NEGQ 92
           PPL+G    SSEP +L H +SVPV+K+N PCYFY+NGFCNKG+ CSFLHG +S     G 
Sbjct: 61  PPLDGHIEASSEPVTLSHHSSVPVNKTNTPCYFYYNGFCNKGERCSFLHGPDSTGTETGP 120

Query: 91  ASVEPPCDQLENTTKARESMQLQSKAE 11
             +    + +E  T      Q Q K +
Sbjct: 121 TLIGRRPNSVETATVTAIETQFQPKED 147


>ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
           [Glycine max]
          Length = 526

 Score =  183 bits (464), Expect = 2e-44
 Identities = 83/143 (58%), Positives = 107/143 (74%)
 Frame = -1

Query: 442 MEDELHKRYTDCVDFLASPLTCKKGIECEFRHNEIARLNPRECWYWLGGNCFNPTCGFRH 263
           M+++  KRYTDCV FLASPLTCKKG ECE+RHNEIARLNPR+CWYWL G C NPTC FRH
Sbjct: 1   MDEDSLKRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRH 60

Query: 262 PPLEGFPGNSSEPASLPHQASVPVSKSNVPCYFYFNGFCNKGDSCSFLHGRNSNEGQASV 83
           PPL+G  G  +   S P Q S+P +K+ VPCYF+FNGFCNKGD CSFLHG   ++   ++
Sbjct: 61  PPLDGHTG--APVPSEPTQTSLPANKTLVPCYFFFNGFCNKGDRCSFLHG--PDDSIFNI 116

Query: 82  EPPCDQLENTTKARESMQLQSKA 14
           +P    ++N   + +++ L++KA
Sbjct: 117 KP----VKNENGSTDALNLENKA 135


>ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536251|gb|EEF37903.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 530

 Score =  180 bits (456), Expect = 2e-43
 Identities = 77/114 (67%), Positives = 92/114 (80%)
 Frame = -1

Query: 442 MEDELHKRYTDCVDFLASPLTCKKGIECEFRHNEIARLNPRECWYWLGGNCFNPTCGFRH 263
           ME+++ KR TDCV FLASPLTCKKG+ECE+RHNEIARLNPR+CWYWL G+C+NPTC FRH
Sbjct: 3   MEEDIQKRNTDCVYFLASPLTCKKGLECEYRHNEIARLNPRDCWYWLAGDCYNPTCAFRH 62

Query: 262 PPLEGFPGNSSEPASLPHQASVPVSKSNVPCYFYFNGFCNKGDSCSFLHGRNSN 101
           PPLE       E +S    +SVP +K+NVPCYF+FNGFCNKGD C F+HG  +N
Sbjct: 63  PPLEMHAEGPPELSS----SSVPANKTNVPCYFFFNGFCNKGDRCFFMHGPEAN 112


>ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
           [Glycine max]
          Length = 524

 Score =  179 bits (454), Expect = 3e-43
 Identities = 83/142 (58%), Positives = 104/142 (73%)
 Frame = -1

Query: 442 MEDELHKRYTDCVDFLASPLTCKKGIECEFRHNEIARLNPRECWYWLGGNCFNPTCGFRH 263
           M+ +  KRYTDCV FLASPLTCKKG ECE+RHNEIARLNPR+CWYWL G C NPTC FRH
Sbjct: 1   MDQDSLKRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRH 60

Query: 262 PPLEGFPGNSSEPASLPHQASVPVSKSNVPCYFYFNGFCNKGDSCSFLHGRNSNEGQASV 83
           PPL+G  G S    S P Q S+P +K+ VPCYF+FNG CNKGD CSFLHG   ++   +V
Sbjct: 61  PPLDGHTGAS--VPSEPTQTSLPANKTMVPCYFFFNGSCNKGDRCSFLHG--PDDSIFTV 116

Query: 82  EPPCDQLENTTKARESMQLQSK 17
           +P    ++N   + +++ L++K
Sbjct: 117 KP----VKNDNGSTDALNLENK 134


>emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]
          Length = 554

 Score =  179 bits (454), Expect = 3e-43
 Identities = 81/137 (59%), Positives = 96/137 (70%), Gaps = 23/137 (16%)
 Frame = -1

Query: 442 MEDELHKRYTDCVDFLASPLTCKKGIECEFRHNEIARLNPRECWYWLGGNCFNPTCGFRH 263
           MEDEL KR TDCV FLASPLTCKKG++CE+RH+E ARLNPR+CWYWL G+C NP C FRH
Sbjct: 1   MEDELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRH 60

Query: 262 P-----------------------PLEGFPGNSSEPASLPHQASVPVSKSNVPCYFYFNG 152
           P                       PL+G    SSEP +L H +SVPV+K+N PCYFY+NG
Sbjct: 61  PVRVMLKRIQRDSRSGLLEEKVHLPLDGHIEASSEPVTLSHHSSVPVNKTNTPCYFYYNG 120

Query: 151 FCNKGDSCSFLHGRNSN 101
           FCNKG+ CSFLHG +S+
Sbjct: 121 FCNKGERCSFLHGPDSS 137


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