BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00027211
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringsp...   137   7e-31
ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot viru...   134   1e-29

>gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score =  137 bits (346), Expect = 7e-31
 Identities = 82/146 (56%), Positives = 97/146 (66%), Gaps = 12/146 (8%)
 Frame = -3

Query: 402 LPKRVRVCSKSTGRFFTVGRHDLHLLPSGKRAWVPLRNPTSAGGSSRRERPQRAVTKQPV 223
           LPKRVRV SK +GR FTVGRHDLH+LPSGKRAWVP+R P +AGG+ RRERP     K   
Sbjct: 14  LPKRVRVVSKRSGRIFTVGRHDLHVLPSGKRAWVPVRAPIAAGGNFRRERPLVVSHKTQQ 73

Query: 222 VRPIRAP--VKVENRFSPLCVEESLVAP-----KSKITYADVVR--AKVSPAKAKKGVVT 70
           VRPIR P  VK  NRF+PL V+E + A        K +YAD +R  A V P+  +KGVVT
Sbjct: 74  VRPIRMPAAVKTSNRFAPLSVKEGVTAAVAAPINPKKSYADALRSSAFVKPS-VRKGVVT 132

Query: 69  LIETSRDFKLFED---LPEPVAIPGQ 1
           L+ET +DF LF D     + V  PGQ
Sbjct: 133 LVETEKDFALFGDEFTQNQVVPCPGQ 158


>ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot virus satellite RNA]
           gi|478364|pir||JQ2018 hypothetical 36.5K protein -
           strawberry latent ringspot virus
           gi|312511|emb|CAA49480.1| 36 kDa protein [Strawberry
           latent ringspot virus satellite RNA]
          Length = 331

 Score =  134 bits (336), Expect = 1e-29
 Identities = 84/146 (57%), Positives = 96/146 (65%), Gaps = 12/146 (8%)
 Frame = -3

Query: 402 LPKRVRVCSKSTGRFFTVGRHDLHLLPSGKRAWVPLRNPTSAGGSSRRERPQRAVTKQPV 223
           LPKRVRV SK   R FTVGRHDLH+LPSGKRAWVP+R P +AGGS RRERP     K   
Sbjct: 14  LPKRVRVISKRRARIFTVGRHDLHVLPSGKRAWVPVRAPIAAGGSFRRERPPVVSHKTQQ 73

Query: 222 VRPIRAP--VKVENRFSPLCVEE---SLVAP--KSKITYADVVR--AKVSPAKAKKGVVT 70
           VRPIR P  VK  NRF+ L V+E     VAP    K +YAD +R  A V P+ A+KGVVT
Sbjct: 74  VRPIRTPTAVKTSNRFASLSVKEEAPEAVAPFNPKKKSYADALRSSAFVKPS-ARKGVVT 132

Query: 69  LIETSRDFKLFED---LPEPVAIPGQ 1
           L+ET +DF LF D     + V  PGQ
Sbjct: 133 LVETEKDFALFCDEFTQNQVVPCPGQ 158