BLASTX nr result
ID: Aconitum21_contig00026494
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00026494
(878 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containi... 318 1e-84
emb|CBI39176.3| unnamed protein product [Vitis vinifera] 317 2e-84
emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera] 288 1e-75
ref|XP_002519389.1| pentatricopeptide repeat-containing protein,... 284 2e-74
ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containi... 277 2e-72
>ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 318 bits (815), Expect = 1e-84
Identities = 151/211 (71%), Positives = 179/211 (84%)
Frame = +1
Query: 46 CHPNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDAC 225
CHPNVVTYTAMIDGFGKAGKVD L L +QMGAKGC PNFVTYRVLINHCCA GLL DA
Sbjct: 772 CHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAH 831
Query: 226 ALLEEMNHTYWPRHVTGYRKVIEGFNKEFINSLGLLDDIAEDVALPIMPAYQILIDSFCK 405
LL+EM TYWP+H+ GYRKVIEGFN+EFI SLGLLD+IAE+VA+PI+PAY+ILIDSFCK
Sbjct: 832 QLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCK 891
Query: 406 AGSLEVAFDLHKEIITSLGVSAINKNMYHSMIKSLSSTCKVEKAFELYGDMVKQGEIPEI 585
AG LE+A +LHKE+ + SA +K++Y S+I+SLS KV+KAFELY DM+K+G IPE+
Sbjct: 892 AGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPEL 951
Query: 586 SAFVDLIRGLIKINKWEEALQLSDSICQMQI 678
S F L++GLI+IN+WEEALQLSD ICQM +
Sbjct: 952 SIFFYLVKGLIRINRWEEALQLSDCICQMMV 982
Score = 94.7 bits (234), Expect = 2e-17
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 20/222 (9%)
Frame = +1
Query: 46 CHPNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDAC 225
C PNVVTYTA+I + KA K+ + LF+ M ++GC PN VTY LI+ C +G + AC
Sbjct: 546 CAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKAC 605
Query: 226 ALLEEMNHTYWPRHVTGYRKVIEGFNKE--------FINSL----------GLLDDIAED 351
+ M V Y K+ +G ++ ++ L LLD ++ +
Sbjct: 606 QIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE 665
Query: 352 VALPIMPAYQILIDSFCKAGSLEVAFDLHKEIITSLGVSAINKNM--YHSMIKSLSSTCK 525
P Y LID FCK G L+ A + + T + N+ Y S+I L +
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEA----QMVFTKMSERGYGPNVYTYSSLIDRLFKDKR 721
Query: 526 VEKAFELYGDMVKQGEIPEISAFVDLIRGLIKINKWEEALQL 651
++ A ++ M++ P + + ++I GL K+ K +EA +L
Sbjct: 722 LDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763
Score = 75.1 bits (183), Expect = 2e-11
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 16/213 (7%)
Frame = +1
Query: 52 PNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDACAL 231
P+ TY+ +I A KVD + +LF++M + P+ TY +LI+ C GLL A
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537
Query: 232 LEEMNHTYWPRHVTGYRKVIEGFNK--EFINSLGLLDDIAEDVALPIMPAYQILIDSFCK 405
+EM +V Y +I + K + ++ L + + + +P + Y LID CK
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597
Query: 406 AGSLEVAFDLHKEIITSLGVSAI--------------NKNMYHSMIKSLSSTCKVEKAFE 543
+G +E A ++ + + + + N Y +++ L KV++A +
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657
Query: 544 LYGDMVKQGEIPEISAFVDLIRGLIKINKWEEA 642
L M +G P + LI G K+ K +EA
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690
Score = 74.7 bits (182), Expect = 3e-11
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 43/245 (17%)
Frame = +1
Query: 46 CHPNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCC--------- 198
C+P+ + ++I + ++G + L ++MG GC P +V Y +LI C
Sbjct: 365 CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLD 424
Query: 199 -------ATGLLSDACALLEEMNHTYWPRHVTG-------YRKVIEGFNKEFI------- 315
A G + DA +L ++N + R + G Y + E +K FI
Sbjct: 425 VLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484
Query: 316 -------------NSLGLLDDIAEDVALPIMPAYQILIDSFCKAGSLEVAFDLHKEIITS 456
N+ L +++ + +P + Y ILIDSFCK G L+ A E++
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544
Query: 457 LGVSAINKNMYHSMIKSLSSTCKVEKAFELYGDMVKQGEIPEISAFVDLIRGLIKINKWE 636
A N Y ++I + K+ A EL+ M+ +G IP + + LI G K + E
Sbjct: 545 --GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602
Query: 637 EALQL 651
+A Q+
Sbjct: 603 KACQI 607
Score = 67.0 bits (162), Expect = 5e-09
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 18/218 (8%)
Frame = +1
Query: 52 PNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDACAL 231
P+V TYT +ID F K G + + F +M GC PN VTY LI+ +S A L
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572
Query: 232 LEEMNHTYWPRHVTGYRKVIEGFNKE---------FINSLGLLDDIAEDVAL-------- 360
E M +V Y +I+G K + G D D+
Sbjct: 573 FEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR 632
Query: 361 -PIMPAYQILIDSFCKAGSLEVAFDLHKEIITSLGVSAINKNMYHSMIKSLSSTCKVEKA 537
P + Y L+D CKA ++ A DL + S+ N +Y ++I K+++A
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLD--VMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690
Query: 538 FELYGDMVKQGEIPEISAFVDLIRGLIKINKWEEALQL 651
++ M ++G P + + LI L K + + AL++
Sbjct: 691 QMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKV 728
Score = 60.5 bits (145), Expect = 5e-07
Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 10/245 (4%)
Frame = +1
Query: 55 NVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDACALL 234
+ V YT MI G +A + ++ +M + C PN VTYR+L+ C L +L
Sbjct: 298 DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRIL 357
Query: 235 EEM--NHTYWPRHVTGYRKVIEGF--NKEFINSLGLLDDIAEDVALPIMPAYQILIDSFC 402
M Y R + + +I + + ++ + LL + + P Y ILI C
Sbjct: 358 SMMITEGCYPSRRI--FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415
Query: 403 ------KAGSLEVAFDLHKEIITSLGVSAINKNMYHSMIKSLSSTCKVEKAFELYGDMVK 564
LE+A + E++ + V +NK ++ + L K EKA+ + +M+
Sbjct: 416 GNEKLPSLDVLELAEKAYGEMLDAHVV--LNKVNVSNLARCLCGAGKFEKAYSIIREMMS 473
Query: 565 QGEIPEISAFVDLIRGLIKINKWEEALQLSDSICQMQIYWQPGET*TIVSYSLCSCYKSR 744
+G IP+ S + +I L +K + A L + + + T TI+ S C +
Sbjct: 474 KGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV-PDVFTYTILIDSFCKVGLLQ 532
Query: 745 QICSW 759
Q W
Sbjct: 533 QARKW 537
>emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 317 bits (812), Expect = 2e-84
Identities = 151/209 (72%), Positives = 178/209 (85%)
Frame = +1
Query: 46 CHPNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDAC 225
CHPNVVTYTAMIDGFGKAGKVD L L +QMGAKGC PNFVTYRVLINHCCA GLL DA
Sbjct: 772 CHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAH 831
Query: 226 ALLEEMNHTYWPRHVTGYRKVIEGFNKEFINSLGLLDDIAEDVALPIMPAYQILIDSFCK 405
LL+EM TYWP+H+ GYRKVIEGFN+EFI SLGLLD+IAE+VA+PI+PAY+ILIDSFCK
Sbjct: 832 QLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCK 891
Query: 406 AGSLEVAFDLHKEIITSLGVSAINKNMYHSMIKSLSSTCKVEKAFELYGDMVKQGEIPEI 585
AG LE+A +LHKE+ + SA +K++Y S+I+SLS KV+KAFELY DM+K+G IPE+
Sbjct: 892 AGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPEL 951
Query: 586 SAFVDLIRGLIKINKWEEALQLSDSICQM 672
S F L++GLI+IN+WEEALQLSD ICQM
Sbjct: 952 SIFFYLVKGLIRINRWEEALQLSDCICQM 980
Score = 94.7 bits (234), Expect = 2e-17
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 20/222 (9%)
Frame = +1
Query: 46 CHPNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDAC 225
C PNVVTYTA+I + KA K+ + LF+ M ++GC PN VTY LI+ C +G + AC
Sbjct: 546 CAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKAC 605
Query: 226 ALLEEMNHTYWPRHVTGYRKVIEGFNKE--------FINSL----------GLLDDIAED 351
+ M V Y K+ +G ++ ++ L LLD ++ +
Sbjct: 606 QIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE 665
Query: 352 VALPIMPAYQILIDSFCKAGSLEVAFDLHKEIITSLGVSAINKNM--YHSMIKSLSSTCK 525
P Y LID FCK G L+ A + + T + N+ Y S+I L +
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEA----QMVFTKMSERGYGPNVYTYSSLIDRLFKDKR 721
Query: 526 VEKAFELYGDMVKQGEIPEISAFVDLIRGLIKINKWEEALQL 651
++ A ++ M++ P + + ++I GL K+ K +EA +L
Sbjct: 722 LDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763
Score = 75.1 bits (183), Expect = 2e-11
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 16/213 (7%)
Frame = +1
Query: 52 PNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDACAL 231
P+ TY+ +I A KVD + +LF++M + P+ TY +LI+ C GLL A
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537
Query: 232 LEEMNHTYWPRHVTGYRKVIEGFNK--EFINSLGLLDDIAEDVALPIMPAYQILIDSFCK 405
+EM +V Y +I + K + ++ L + + + +P + Y LID CK
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597
Query: 406 AGSLEVAFDLHKEIITSLGVSAI--------------NKNMYHSMIKSLSSTCKVEKAFE 543
+G +E A ++ + + + + N Y +++ L KV++A +
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657
Query: 544 LYGDMVKQGEIPEISAFVDLIRGLIKINKWEEA 642
L M +G P + LI G K+ K +EA
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690
Score = 74.7 bits (182), Expect = 3e-11
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 43/245 (17%)
Frame = +1
Query: 46 CHPNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCC--------- 198
C+P+ + ++I + ++G + L ++MG GC P +V Y +LI C
Sbjct: 365 CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLD 424
Query: 199 -------ATGLLSDACALLEEMNHTYWPRHVTG-------YRKVIEGFNKEFI------- 315
A G + DA +L ++N + R + G Y + E +K FI
Sbjct: 425 VLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484
Query: 316 -------------NSLGLLDDIAEDVALPIMPAYQILIDSFCKAGSLEVAFDLHKEIITS 456
N+ L +++ + +P + Y ILIDSFCK G L+ A E++
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544
Query: 457 LGVSAINKNMYHSMIKSLSSTCKVEKAFELYGDMVKQGEIPEISAFVDLIRGLIKINKWE 636
A N Y ++I + K+ A EL+ M+ +G IP + + LI G K + E
Sbjct: 545 --GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602
Query: 637 EALQL 651
+A Q+
Sbjct: 603 KACQI 607
Score = 67.0 bits (162), Expect = 5e-09
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 18/218 (8%)
Frame = +1
Query: 52 PNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDACAL 231
P+V TYT +ID F K G + + F +M GC PN VTY LI+ +S A L
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572
Query: 232 LEEMNHTYWPRHVTGYRKVIEGFNKE---------FINSLGLLDDIAEDVAL-------- 360
E M +V Y +I+G K + G D D+
Sbjct: 573 FEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR 632
Query: 361 -PIMPAYQILIDSFCKAGSLEVAFDLHKEIITSLGVSAINKNMYHSMIKSLSSTCKVEKA 537
P + Y L+D CKA ++ A DL + S+ N +Y ++I K+++A
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLD--VMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690
Query: 538 FELYGDMVKQGEIPEISAFVDLIRGLIKINKWEEALQL 651
++ M ++G P + + LI L K + + AL++
Sbjct: 691 QMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKV 728
Score = 60.5 bits (145), Expect = 5e-07
Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 10/245 (4%)
Frame = +1
Query: 55 NVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDACALL 234
+ V YT MI G +A + ++ +M + C PN VTYR+L+ C L +L
Sbjct: 298 DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRIL 357
Query: 235 EEM--NHTYWPRHVTGYRKVIEGF--NKEFINSLGLLDDIAEDVALPIMPAYQILIDSFC 402
M Y R + + +I + + ++ + LL + + P Y ILI C
Sbjct: 358 SMMITEGCYPSRRI--FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415
Query: 403 ------KAGSLEVAFDLHKEIITSLGVSAINKNMYHSMIKSLSSTCKVEKAFELYGDMVK 564
LE+A + E++ + V +NK ++ + L K EKA+ + +M+
Sbjct: 416 GNEKLPSLDVLELAEKAYGEMLDAHVV--LNKVNVSNLARCLCGAGKFEKAYSIIREMMS 473
Query: 565 QGEIPEISAFVDLIRGLIKINKWEEALQLSDSICQMQIYWQPGET*TIVSYSLCSCYKSR 744
+G IP+ S + +I L +K + A L + + + T TI+ S C +
Sbjct: 474 KGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV-PDVFTYTILIDSFCKVGLLQ 532
Query: 745 QICSW 759
Q W
Sbjct: 533 QARKW 537
>emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 288 bits (736), Expect = 1e-75
Identities = 137/195 (70%), Positives = 164/195 (84%)
Frame = +1
Query: 46 CHPNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDAC 225
CHPNVVTYTAMIDGFGKAGKVD L L +QMGAKGC PNFVTYRVLINHCCA GLL DA
Sbjct: 772 CHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAH 831
Query: 226 ALLEEMNHTYWPRHVTGYRKVIEGFNKEFINSLGLLDDIAEDVALPIMPAYQILIDSFCK 405
LL+EM TYWP+H+ GYRKVIEGFN+EFI SLGLLD+IAE+VA+PI+PAY+ILIDSFCK
Sbjct: 832 QLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCK 891
Query: 406 AGSLEVAFDLHKEIITSLGVSAINKNMYHSMIKSLSSTCKVEKAFELYGDMVKQGEIPEI 585
AG LE+A +LHK + + SA +K++Y S+I+SLS KV+KAFELY DM+K+G IPE+
Sbjct: 892 AGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPEL 951
Query: 586 SAFVDLIRGLIKINK 630
S F L++GLI+IN+
Sbjct: 952 SIFFYLVKGLIRINR 966
Score = 94.7 bits (234), Expect = 2e-17
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 20/222 (9%)
Frame = +1
Query: 46 CHPNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDAC 225
C PNVVTYTA+I + KA K+ + LF+ M ++GC PN VTY LI+ C +G + AC
Sbjct: 546 CAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKAC 605
Query: 226 ALLEEMNHTYWPRHVTGYRKVIEGFNKE--------FINSL----------GLLDDIAED 351
+ M V Y K+ +G ++ ++ L LLD ++ +
Sbjct: 606 QIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE 665
Query: 352 VALPIMPAYQILIDSFCKAGSLEVAFDLHKEIITSLGVSAINKNM--YHSMIKSLSSTCK 525
P Y LID FCK G L+ A + + T + N+ Y S+I L +
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEA----QMVFTKMSERGYGPNVYTYSSLIDRLFKDKR 721
Query: 526 VEKAFELYGDMVKQGEIPEISAFVDLIRGLIKINKWEEALQL 651
++ A ++ M++ P + + ++I GL K+ K +EA +L
Sbjct: 722 LDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763
Score = 75.1 bits (183), Expect = 2e-11
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 16/213 (7%)
Frame = +1
Query: 52 PNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDACAL 231
P+ TY+ +I A KVD + +LF++M + P+ TY +LI+ C GLL A
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537
Query: 232 LEEMNHTYWPRHVTGYRKVIEGFNK--EFINSLGLLDDIAEDVALPIMPAYQILIDSFCK 405
+EM +V Y +I + K + ++ L + + + +P + Y LID CK
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597
Query: 406 AGSLEVAFDLHKEIITSLGVSAI--------------NKNMYHSMIKSLSSTCKVEKAFE 543
+G +E A ++ + + + + N Y +++ L KV++A +
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657
Query: 544 LYGDMVKQGEIPEISAFVDLIRGLIKINKWEEA 642
L M +G P + LI G K+ K +EA
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690
Score = 74.7 bits (182), Expect = 3e-11
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 43/245 (17%)
Frame = +1
Query: 46 CHPNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCC--------- 198
C+P+ + ++I + ++G + L ++MG GC P +V Y +LI C
Sbjct: 365 CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLD 424
Query: 199 -------ATGLLSDACALLEEMNHTYWPRHVTG-------YRKVIEGFNKEFI------- 315
A G + DA +L ++N + R + G Y + E +K FI
Sbjct: 425 VLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484
Query: 316 -------------NSLGLLDDIAEDVALPIMPAYQILIDSFCKAGSLEVAFDLHKEIITS 456
N+ L +++ + +P + Y ILIDSFCK G L+ A E++
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544
Query: 457 LGVSAINKNMYHSMIKSLSSTCKVEKAFELYGDMVKQGEIPEISAFVDLIRGLIKINKWE 636
A N Y ++I + K+ A EL+ M+ +G IP + + LI G K + E
Sbjct: 545 --GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602
Query: 637 EALQL 651
+A Q+
Sbjct: 603 KACQI 607
Score = 67.0 bits (162), Expect = 5e-09
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 18/218 (8%)
Frame = +1
Query: 52 PNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDACAL 231
P+V TYT +ID F K G + + F +M GC PN VTY LI+ +S A L
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572
Query: 232 LEEMNHTYWPRHVTGYRKVIEGFNKE---------FINSLGLLDDIAEDVAL-------- 360
E M +V Y +I+G K + G D D+
Sbjct: 573 FEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR 632
Query: 361 -PIMPAYQILIDSFCKAGSLEVAFDLHKEIITSLGVSAINKNMYHSMIKSLSSTCKVEKA 537
P + Y L+D CKA ++ A DL + S+ N +Y ++I K+++A
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLD--VMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690
Query: 538 FELYGDMVKQGEIPEISAFVDLIRGLIKINKWEEALQL 651
++ M ++G P + + LI L K + + AL++
Sbjct: 691 QMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKV 728
Score = 60.5 bits (145), Expect = 5e-07
Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 10/245 (4%)
Frame = +1
Query: 55 NVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDACALL 234
+ V YT MI G +A + ++ +M + C PN VTYR+L+ C L +L
Sbjct: 298 DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRIL 357
Query: 235 EEM--NHTYWPRHVTGYRKVIEGF--NKEFINSLGLLDDIAEDVALPIMPAYQILIDSFC 402
M Y R + + +I + + ++ + LL + + P Y ILI C
Sbjct: 358 SMMITEGCYPSRRI--FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415
Query: 403 ------KAGSLEVAFDLHKEIITSLGVSAINKNMYHSMIKSLSSTCKVEKAFELYGDMVK 564
LE+A + E++ + V +NK ++ + L K EKA+ + +M+
Sbjct: 416 GNEKLPSLDVLELAEKAYGEMLDAHVV--LNKVNVSNLARCLCGAGKFEKAYSIIREMMS 473
Query: 565 QGEIPEISAFVDLIRGLIKINKWEEALQLSDSICQMQIYWQPGET*TIVSYSLCSCYKSR 744
+G IP+ S + +I L +K + A L + + + T TI+ S C +
Sbjct: 474 KGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV-PDVFTYTILIDSFCKVGLLQ 532
Query: 745 QICSW 759
Q W
Sbjct: 533 QARKW 537
>ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541456|gb|EEF43006.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 634
Score = 284 bits (727), Expect = 2e-74
Identities = 134/213 (62%), Positives = 171/213 (80%)
Frame = +1
Query: 46 CHPNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDAC 225
C+PNVVTYTAMIDGFGKAG+VD L L Q M +KGC PNF+TYRVLINHCCA GLL DA
Sbjct: 415 CYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAH 474
Query: 226 ALLEEMNHTYWPRHVTGYRKVIEGFNKEFINSLGLLDDIAEDVALPIMPAYQILIDSFCK 405
LLEEM TYWP+H+ YRKVIEGF+ EF+ SLGLL +++ED ++PI+P Y++LID+F K
Sbjct: 475 KLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIK 534
Query: 406 AGSLEVAFDLHKEIITSLGVSAINKNMYHSMIKSLSSTCKVEKAFELYGDMVKQGEIPEI 585
AG LE+A +LH+E+ + SA +N Y S+I+SL+ CKV+KAF+LY DM ++G +PE+
Sbjct: 535 AGRLEMALELHEELSS---FSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPEL 591
Query: 586 SAFVDLIRGLIKINKWEEALQLSDSICQMQIYW 684
S V LI+GL+++ KWEEALQLSDSICQM I+W
Sbjct: 592 SMLVCLIKGLLRVGKWEEALQLSDSICQMDIHW 624
Score = 91.3 bits (225), Expect = 3e-16
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Frame = +1
Query: 46 CHPNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDAC 225
C PNVVTYTA+I + K K+ + +F+ M + GC PN VTY LI+ C G AC
Sbjct: 188 CAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKAC 247
Query: 226 ALLEEMNH---------TYW--------PRHVTGYRKVIEGFNK--EFINSLGLLDDIAE 348
+ M + Y+ +V Y +++G K + + LL+ ++
Sbjct: 248 QIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSL 307
Query: 349 DVALPIMPAYQILIDSFCKAGSLEVAFDLHKEIITSLGVSAINKNM--YHSMIKSLSSTC 522
+ P Y LID FCK G L+ A +E+ T + + N+ Y S+I L
Sbjct: 308 EGCEPNQIIYDALIDGFCKVGKLDEA----QEVFTKMLGHGCSPNVYTYSSLIDKLFKDK 363
Query: 523 KVEKAFELYGDMVKQGEIPEISAFVDLIRGLIKINKWEEALQL 651
+++ A ++ M++ P + + +++ GL K+ K +EA +L
Sbjct: 364 RLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRL 406
Score = 75.1 bits (183), Expect = 2e-11
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Frame = +1
Query: 52 PNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDACAL 231
P+ TY+ +I A KV+ + LFQ+M G TP+ TY L++ C GL+ A
Sbjct: 120 PDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNW 179
Query: 232 LEEMNHTYWPRHVTGYRKVIEGF--NKEFINSLGLLDDIAEDVALPIMPAYQILIDSFCK 405
+EM +V Y +I + ++ + + + + + +P + Y LID CK
Sbjct: 180 FDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCK 239
Query: 406 AGSLEVAFDLHKEI---------------ITSLGVSAINKNMYHSMIKSLSSTCKVEKAF 540
AG E A ++ + I + N Y +++ L KV++A
Sbjct: 240 AGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEAR 299
Query: 541 ELYGDMVKQGEIPEISAFVDLIRGLIKINKWEEALQL 651
+L M +G P + LI G K+ K +EA ++
Sbjct: 300 DLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEV 336
Score = 73.6 bits (179), Expect = 6e-11
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 19/219 (8%)
Frame = +1
Query: 52 PNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDACAL 231
P+V TYT ++D F K G ++ + F +M GC PN VTY LI+ T LS A +
Sbjct: 155 PDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEI 214
Query: 232 LEEMNHTYWPRHVTGYRKVIEGF------------------NKEFINSLGLLDDIAE-DV 354
E M ++ Y +I+G +K I + + I + ++
Sbjct: 215 FEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSEL 274
Query: 355 ALPIMPAYQILIDSFCKAGSLEVAFDLHKEIITSLGVSAINKNMYHSMIKSLSSTCKVEK 534
P + Y L+D CKA ++ A DL + + SL N+ +Y ++I K+++
Sbjct: 275 KEPNVVTYGALVDGLCKAHKVKEARDLLETM--SLEGCEPNQIIYDALIDGFCKVGKLDE 332
Query: 535 AFELYGDMVKQGEIPEISAFVDLIRGLIKINKWEEALQL 651
A E++ M+ G P + + LI L K + + AL++
Sbjct: 333 AQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKV 371
>ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 277 bits (709), Expect = 2e-72
Identities = 131/213 (61%), Positives = 166/213 (77%)
Frame = +1
Query: 46 CHPNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDAC 225
C PNVVTYTAMIDGFGKAGKVD L LF++MG+KGC PNFVTY VLINHCCATG L +A
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAY 840
Query: 226 ALLEEMNHTYWPRHVTGYRKVIEGFNKEFINSLGLLDDIAEDVALPIMPAYQILIDSFCK 405
ALLEEM TYWP+HV+ Y KVIEG+ +EFI SLGLL+++ ++ + PI+ Y++LID+F K
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVK 900
Query: 406 AGSLEVAFDLHKEIITSLGVSAINKNMYHSMIKSLSSTCKVEKAFELYGDMVKQGEIPEI 585
AG LEVA +LHKE+I++ A KN+Y S+I S S K+ AFEL+ DM++ G IP++
Sbjct: 901 AGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDL 960
Query: 586 SAFVDLIRGLIKINKWEEALQLSDSICQMQIYW 684
FV L+ GLI++ +WEEALQLSDS+CQM I W
Sbjct: 961 GTFVHLLMGLIRVRRWEEALQLSDSLCQMDINW 993
Score = 96.3 bits (238), Expect = 8e-18
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 20/222 (9%)
Frame = +1
Query: 46 CHPNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDAC 225
C P VVTYT +I + KA KV ++ LF+ M AKGC PN +TY LI+ C +G + AC
Sbjct: 555 CEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKAC 614
Query: 226 ALLEEM----------------NHTYWPRHVTGYRKVIEGFNK--EFINSLGLLDDIAED 351
+ M N+ +V Y +++G K + ++ LL+ + D
Sbjct: 615 QIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVD 674
Query: 352 VALPIMPAYQILIDSFCKAGSLEVAFDLHKEIITSLGVSAINKNM--YHSMIKSLSSTCK 525
P Y LID FCKA L+ A +E+ + N N+ Y S+I L +
Sbjct: 675 GCEPNTIVYDALIDGFCKAAKLDEA----QEVFHKMVEHGYNPNVYTYSSLIDRLFKDKR 730
Query: 526 VEKAFELYGDMVKQGEIPEISAFVDLIRGLIKINKWEEALQL 651
++ ++ M++ P I + ++I GL K+ K +EA +L
Sbjct: 731 LDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKL 772
Score = 67.0 bits (162), Expect = 5e-09
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 6/206 (2%)
Frame = +1
Query: 52 PNVVTYTAMIDGFGKAGKVDMSLMLFQQMGAKGCTPNFVTYRVLINHCCATGLLSDACAL 231
PN + Y MI G +A + ++ +M + C PN TYR+L+ C L +
Sbjct: 306 PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRI 365
Query: 232 LEEMNHTYWPRHVTGYRKVIEGFNK--EFINSLGLLDDIAEDVALPIMPAYQILIDSFCK 405
L M T + ++ + K +F + LL + + P Y ILI S C
Sbjct: 366 LSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICS 425
Query: 406 AGSL--EVAFDLHKEIITSL--GVSAINKNMYHSMIKSLSSTCKVEKAFELYGDMVKQGE 573
G L V F+L ++ + + +NK S + L K EKA+++ +M+ G
Sbjct: 426 GGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGF 485
Query: 574 IPEISAFVDLIRGLIKINKWEEALQL 651
+P+ S + ++I L ++ E A L
Sbjct: 486 VPDTSTYSEVIGFLCNASRVENAFFL 511