BLASTX nr result

ID: Aconitum21_contig00026429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00026429
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote...   127   1e-27
ref|XP_003598058.1| Sister chromatid cohesion 1 protein [Medicag...   116   2e-24
ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 prote...   110   2e-22
ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus com...   107   1e-21
emb|CBI24843.3| unnamed protein product [Vitis vinifera]               99   4e-19

>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
            vinifera]
          Length = 761

 Score =  127 bits (319), Expect = 1e-27
 Identities = 73/130 (56%), Positives = 89/130 (68%), Gaps = 4/130 (3%)
 Frame = +2

Query: 2    QFGTVGSNLSDIPESMNSADGE--DLWFLDADN-TPAAEQTENEVHALSARTRAVAQYLK 172
            Q G   + LSDIPE +NSA+    +L FL+AD+ TP       +V  LS RTRAVAQYL+
Sbjct: 632  QLGVENTGLSDIPELVNSAEVSLSELNFLEADDMTPTGSPGTQDVSTLSIRTRAVAQYLQ 691

Query: 173  EQSPTTVASKDHTASLNLNKILGDKTRKKCGRMFFETLVLKSYGYIDVQQEEPYGDITLL 352
              SP    S+D +  L+LNKIL  KTRK   RMFFETLVLK+YG +DVQQEEPYGDITL 
Sbjct: 692  NHSPINPISEDPSMELSLNKILEGKTRKIAARMFFETLVLKNYGLVDVQQEEPYGDITLK 751

Query: 353  LDP-LSNSKF 379
            + P LS ++F
Sbjct: 752  MTPKLSKARF 761


>ref|XP_003598058.1| Sister chromatid cohesion 1 protein [Medicago truncatula]
           gi|355487106|gb|AES68309.1| Sister chromatid cohesion 1
           protein [Medicago truncatula]
          Length = 737

 Score =  116 bits (291), Expect = 2e-24
 Identities = 60/116 (51%), Positives = 76/116 (65%), Gaps = 3/116 (2%)
 Frame = +2

Query: 23  NLSDIPESMNSADGEDLWFLDADNTPA---AEQTENEVHALSARTRAVAQYLKEQSPTTV 193
           + SD  + +NSA  +DLWFL+ D+TPA   ++ T   +  LS RTR +AQYLK+ SP T 
Sbjct: 615 DFSDTNQFINSAGKDDLWFLEEDSTPATASSQSTSRSIDTLSGRTRGLAQYLKDYSPCTT 674

Query: 194 ASKDHTASLNLNKILGDKTRKKCGRMFFETLVLKSYGYIDVQQEEPYGDITLLLDP 361
             +      +LNKIL  KTRK   RMFFE LVLK++  IDVQQEEPYGDI+  L P
Sbjct: 675 IPEQPAEDFSLNKILDGKTRKIAARMFFEVLVLKTHDLIDVQQEEPYGDISFKLTP 730


>ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis
            sativus]
          Length = 908

 Score =  110 bits (275), Expect = 2e-22
 Identities = 62/118 (52%), Positives = 77/118 (65%)
 Frame = +2

Query: 8    GTVGSNLSDIPESMNSADGEDLWFLDADNTPAAEQTENEVHALSARTRAVAQYLKEQSPT 187
            G     LSD  + + +AD EDL+FL+ D++PA  Q    V +LS RTRA+ +YL+  SP 
Sbjct: 787  GAEDLTLSD--KQIGTAD-EDLYFLEVDSSPAGSQGTRGVDSLSVRTRALGRYLRSLSPI 843

Query: 188  TVASKDHTASLNLNKILGDKTRKKCGRMFFETLVLKSYGYIDVQQEEPYGDITLLLDP 361
               S +    L+LN IL  K RK C RMF+ETLVLKSYG IDVQQ+ PYGDITL L P
Sbjct: 844  KSISDNSNQDLSLNGILEGKRRKLCARMFYETLVLKSYGLIDVQQDVPYGDITLKLTP 901


>ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus communis]
           gi|223547692|gb|EEF49185.1| cohesin subunit rad21,
           putative [Ricinus communis]
          Length = 774

 Score =  107 bits (268), Expect = 1e-21
 Identities = 55/100 (55%), Positives = 69/100 (69%)
 Frame = +2

Query: 2   QFGTVGSNLSDIPESMNSADGEDLWFLDADNTPAAEQTENEVHALSARTRAVAQYLKEQS 181
           QF    + LSDIPE +N+A+ EDL+FL+ADN+PA       + +LS RTRAVAQYLK  S
Sbjct: 637 QFDAGHTGLSDIPEFVNTAEAEDLYFLEADNSPAGSPGSQGIDSLSVRTRAVAQYLKRNS 696

Query: 182 PTTVASKDHTASLNLNKILGDKTRKKCGRMFFETLVLKSY 301
           P T  S+D +  L+LN+IL  KTRK C RMFFETL +  Y
Sbjct: 697 PITPVSEDLSGDLSLNRILQGKTRKLCARMFFETLCVWFY 736


>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 62/127 (48%), Positives = 75/127 (59%), Gaps = 1/127 (0%)
 Frame = +2

Query: 2   QFGTVGSNLSDIPESMNSADGEDLWFLDADNTPAAEQTENEVHALSARTRAVAQYLKEQS 181
           Q G   + LSDIPE +NSA+                       +LS    AVAQYL+  S
Sbjct: 608 QLGVENTGLSDIPELVNSAEV----------------------SLSV---AVAQYLQNHS 642

Query: 182 PTTVASKDHTASLNLNKILGDKTRKKCGRMFFETLVLKSYGYIDVQQEEPYGDITLLLDP 361
           P    S+D +  L+LNKIL  KTRK   RMFFETLVLK+YG +DVQQEEPYGDITL + P
Sbjct: 643 PINPISEDPSMELSLNKILEGKTRKIAARMFFETLVLKNYGLVDVQQEEPYGDITLKMTP 702

Query: 362 -LSNSKF 379
            LS ++F
Sbjct: 703 KLSKARF 709


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