BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00026120
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containi...   143   1e-32
ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containi...   137   9e-31
ref|NP_194398.1| pentatricopeptide repeat-containing protein [Ar...   122   3e-26
ref|XP_002869597.1| pentatricopeptide repeat-containing protein ...   120   9e-26
ref|XP_003625044.1| Pentatricopeptide repeat-containing protein ...   120   1e-25

>ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Vitis vinifera]
          Length = 616

 Score =  143 bits (361), Expect = 1e-32
 Identities = 64/103 (62%), Positives = 85/103 (82%), Gaps = 5/103 (4%)
 Frame = +2

Query: 95  NLGFRRFSTSTSSILG-----KNWNPLPLPHRTIPEPKGQDLDYVNVAHSHLVHTDWAKL 259
           ++ FR FST  +         ++WNP+P+PHRTIPEP+GQDLD+VNVAHSHL+++DWAKL
Sbjct: 89  SIPFRGFSTLLNGAAKTPNYMRSWNPIPVPHRTIPEPRGQDLDFVNVAHSHLINSDWAKL 148

Query: 260 NSLSSGLTSFRIKHILLKIQKDHVLSLEFFNWVEKQNPSFHSL 388
           NS+S+GLT +R+KHI+LKI+KDHVLS EFFNWV+ QNP+  +L
Sbjct: 149 NSMSTGLTPYRMKHIMLKIKKDHVLSFEFFNWVKAQNPNCQTL 191


>ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
           gi|449528063|ref|XP_004171026.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
          Length = 536

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/112 (60%), Positives = 83/112 (74%), Gaps = 15/112 (13%)
 Frame = +2

Query: 98  LGFRRFSTSTSSI--------------LGK-NWNPLPLPHRTIPEPKGQDLDYVNVAHSH 232
           L FRRFST   S+              LGK N + +P+PHR+IPEP+G DLD+VNV HSH
Sbjct: 4   LPFRRFSTLLGSVPRTYASISPKFDLSLGKRNRDSIPIPHRSIPEPRGPDLDFVNVVHSH 63

Query: 233 LVHTDWAKLNSLSSGLTSFRIKHILLKIQKDHVLSLEFFNWVEKQNPSFHSL 388
           L+H+DW+KL+ LS GLT+FR+KHILLK QKD+VLSLEFFNWV  QNPS H+L
Sbjct: 64  LIHSDWSKLDCLSMGLTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTL 115


>ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|334186944|ref|NP_001190849.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g26680, mitochondrial; Flags: Precursor
           gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis
           thaliana] gi|7269520|emb|CAB79523.1| putative protein
           [Arabidopsis thaliana] gi|332659836|gb|AEE85236.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana] gi|332659837|gb|AEE85237.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 521

 Score =  122 bits (306), Expect = 3e-26
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
 Frame = +2

Query: 62  NIKVRFQFVVSNLGFRRFSTSTSSILGKNWNPL--PLPHRTIPEPKGQDLDYVNVAHSHL 235
           N ++R+QF      F  +S S +  L K       P+PHR  PEPKGQDLD+VNVAHSHL
Sbjct: 9   NRRLRYQFS----SFAGYSGSENPRLFKTLGAANTPIPHRRNPEPKGQDLDFVNVAHSHL 64

Query: 236 VHTDWAKLNSLSSGLTSFRIKHILLKIQKDHVLSLEFFNWVEKQNPSFHSL 388
           + +DW KLN LS  L SFR+K++LLKIQKD++LSLEFFNW + +NP  HSL
Sbjct: 65  IQSDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSL 115


>ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315433|gb|EFH45856.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 538

 Score =  120 bits (302), Expect = 9e-26
 Identities = 52/77 (67%), Positives = 66/77 (85%)
 Frame = +2

Query: 158 LPLPHRTIPEPKGQDLDYVNVAHSHLVHTDWAKLNSLSSGLTSFRIKHILLKIQKDHVLS 337
           +P+PHR+ PEPKGQDLD+VNVAHSHL+ +DW KLN LS  L SFR+K++LLKIQKD++LS
Sbjct: 39  IPIPHRSNPEPKGQDLDFVNVAHSHLIQSDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLS 98

Query: 338 LEFFNWVEKQNPSFHSL 388
            EFFNW + +NP+ HSL
Sbjct: 99  FEFFNWAKTRNPASHSL 115


>ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500059|gb|AES81262.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 521

 Score =  120 bits (300), Expect = 1e-25
 Identities = 53/96 (55%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
 Frame = +2

Query: 104 FRRFSTSTSSILGKNWNP-LPLPHRTIPEPKGQDLDYVNVAHSHLVHTDWAKLNSLSSGL 280
           F +FST++     K  +P LP+PHRT+P+PKGQDLD++N+ HSH +H+ W KL   S  L
Sbjct: 7   FHQFSTTSIQSHTKTHSPYLPIPHRTLPQPKGQDLDFINIFHSHFIHSQWEKLTPFSKTL 66

Query: 281 TSFRIKHILLKIQKDHVLSLEFFNWVEKQNPSFHSL 388
           T F+I+HILLK+Q D VLSL+FFNWV+  NP+ H+L
Sbjct: 67  TPFKIQHILLKLQNDAVLSLKFFNWVQTHNPNSHTL 102