BLASTX nr result
ID: Aconitum21_contig00026106
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00026106
(506 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containi... 243 1e-62
ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|2... 237 9e-61
ref|XP_002525211.1| pentatricopeptide repeat-containing protein,... 225 3e-57
ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 224 4e-57
ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containi... 224 6e-57
>ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 243 bits (620), Expect = 1e-62
Identities = 119/168 (70%), Positives = 139/168 (82%)
Frame = -1
Query: 506 IGLYAKCGVLDYAREEFDGMIGKDDISYGSMISGYMIHGFVDKAMELFREMKNPSLSTWN 327
IGLYAKCG LDYARE F+ M KD+++YGS++SGYM HGFVDKAM+LFREMKNP LSTWN
Sbjct: 283 IGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLFREMKNPRLSTWN 342
Query: 326 AVLSGLVQNKCHELMPRLLREMQSTGFRPNSVTLSSVLPTFSFYSNLKCGKQIHCYAIRN 147
AV+SGLVQN C+E + L++EMQ GFRPN+VTLSS+LPTFS +SNLK GK IH YAIRN
Sbjct: 343 AVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSNLKGGKAIHAYAIRN 402
Query: 146 NYDTNIYVATAVIDLYAKGGYLLGAHQVFTQCSGKSLIVWTAIISAYA 3
Y NIYVAT++ID YAK G+L GA VF Q +SLIVWTAIISAY+
Sbjct: 403 GYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISAYS 450
Score = 71.6 bits (174), Expect = 6e-11
Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Frame = -1
Query: 368 LFREMKNPSLSTWNAVLSGLVQNKCHELMPRLLREM-QSTGFRPNSVTLSSVLPTFSFYS 192
LF M + + +WN++++G Q +E L R+M STG RPN VT+ SVL + +
Sbjct: 196 LFDRMHDRDIVSWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTN 255
Query: 191 NLKCGKQIHCYAIRNNYDTNIYVATAVIDLYAKGGYLLGAHQVFTQCSGKSLIVWTAIIS 12
+L G ++H + I + ++ ++I LYAK G L A ++F + S K + + +I+S
Sbjct: 256 DLVFGMKVHQFIIERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVS 315
Query: 11 AY 6
Y
Sbjct: 316 GY 317
Score = 55.5 bits (132), Expect = 5e-06
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Frame = -1
Query: 506 IGLYAKCGVLDYAREEFDGMIGKDDISYGSMISGYMIHGFVDKAMELFREMKNPSLSTWN 327
I Y+K L A + FD ++ K+ S+ +M+ GY IH N + T N
Sbjct: 76 ITFYSKSNHLYEAHKVFDKILDKNIFSWNAMLIGYSIH--------------NMHVHTLN 121
Query: 326 AVLSGLVQNKCHELMPRLLREMQSTGFRPNSVTLSSVLPTFS-FYSNLKCGKQIHCYAIR 150
+ S L+P S +P++ T++ VL S + + K++ C+ +R
Sbjct: 122 LLSS---------LLP-----SYSLTLKPDNFTITCVLKALSVLFPDSILAKEVQCFVLR 167
Query: 149 NNYDTNIYVATAVIDLYAKGGYLLGAHQVFTQCSGKSLIVWTAIISAYA 3
+ +D++I+V A+I Y++ A +F + + ++ W ++I+ Y+
Sbjct: 168 HGFDSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIVSWNSMIAGYS 216
>ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|222854472|gb|EEE92019.1|
predicted protein [Populus trichocarpa]
Length = 621
Score = 237 bits (604), Expect = 9e-61
Identities = 117/168 (69%), Positives = 137/168 (81%)
Frame = -1
Query: 506 IGLYAKCGVLDYAREEFDGMIGKDDISYGSMISGYMIHGFVDKAMELFREMKNPSLSTWN 327
IGLYAKCG LDYARE FD M KD+++YG++ISGYM HG VDK MELFREMK+ LSTWN
Sbjct: 268 IGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGYMAHGVVDKGMELFREMKSRVLSTWN 327
Query: 326 AVLSGLVQNKCHELMPRLLREMQSTGFRPNSVTLSSVLPTFSFYSNLKCGKQIHCYAIRN 147
AV+SGLVQN HE + L+REMQ GFRPN+VTLSSVLPT S++SNLK GK+IH YA++N
Sbjct: 328 AVISGLVQNNRHEGVVDLVREMQGLGFRPNAVTLSSVLPTLSYFSNLKGGKEIHGYAVKN 387
Query: 146 NYDTNIYVATAVIDLYAKGGYLLGAHQVFTQCSGKSLIVWTAIISAYA 3
YD NIYVATA+ID YAK G+L GA VF Q +SLI+WTAIISA+A
Sbjct: 388 GYDRNIYVATAIIDTYAKLGFLFGAQYVFDQSKERSLIIWTAIISAHA 435
Score = 78.6 bits (192), Expect = 5e-13
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 1/139 (0%)
Frame = -1
Query: 419 SMISGYMIHGFVDKAMELFREMKNPSLSTWNAVLSGLVQNKCHELMPRLLREMQST-GFR 243
++IS Y V A +LF +M+ + TWN++++G Q + L REM + GF+
Sbjct: 164 ALISFYSKCLGVGFARKLFDKMRERDVVTWNSMIAGYAQAGFFKECKELYREMGALPGFK 223
Query: 242 PNSVTLSSVLPTFSFYSNLKCGKQIHCYAIRNNYDTNIYVATAVIDLYAKGGYLLGAHQV 63
PN+VT+ SVL +L G ++H Y + N + ++ V A+I LYAK G L A ++
Sbjct: 224 PNAVTVLSVLQACMQSQDLVFGMEVHRYIVDNKVELDVLVCNALIGLYAKCGSLDYAREL 283
Query: 62 FTQCSGKSLIVWTAIISAY 6
F + S K + + AIIS Y
Sbjct: 284 FDEMSEKDEVTYGAIISGY 302
Score = 56.2 bits (134), Expect = 3e-06
Identities = 37/171 (21%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Frame = -1
Query: 506 IGLYAKCGVLDYAREEFDGMIGKDDISYGSMISGYMIHGFVDKAMELFREMKNPSLSTWN 327
I LY+K + +AR FD + K+ SY +++ Y ++ + + LF + S
Sbjct: 59 INLYSKTKHIHHARHVFDQIPHKNTFSYNALLIAYTMNNHHKETINLFSSLLLSS----- 113
Query: 326 AVLSGLVQNKCHELMPRLLREMQSTGFRPNSVTLSSVLPTFS---FYSNLKCGKQIHCYA 156
S +PN+ +++ +L + S +++ GK+IHC+
Sbjct: 114 -----------------------SGDLQPNNYSITCLLKSLSSLLMVTDVCLGKEIHCFV 150
Query: 155 IRNNYDTNIYVATAVIDLYAKGGYLLGAHQVFTQCSGKSLIVWTAIISAYA 3
+R +++V A+I Y+K + A ++F + + ++ W ++I+ YA
Sbjct: 151 LRRGLVEDVFVENALISFYSKCLGVGFARKLFDKMRERDVVTWNSMIAGYA 201
>ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535508|gb|EEF37177.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 654
Score = 225 bits (574), Expect = 3e-57
Identities = 109/168 (64%), Positives = 137/168 (81%)
Frame = -1
Query: 506 IGLYAKCGVLDYAREEFDGMIGKDDISYGSMISGYMIHGFVDKAMELFREMKNPSLSTWN 327
IGLYAKCG LDYARE FD M KD+++YG++ISG M+HG+VD+++ELFR MK LSTWN
Sbjct: 270 IGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWN 329
Query: 326 AVLSGLVQNKCHELMPRLLREMQSTGFRPNSVTLSSVLPTFSFYSNLKCGKQIHCYAIRN 147
AV++GLVQN HE + L+REMQ+ GFRPN+VTLSSVL T +++S+LK GK+IH YAI+
Sbjct: 330 AVITGLVQNNRHEGVLDLVREMQALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKI 389
Query: 146 NYDTNIYVATAVIDLYAKGGYLLGAHQVFTQCSGKSLIVWTAIISAYA 3
Y NIYVATA+ID+YAK GYL GA +VF Q +SL++WTAIISAYA
Sbjct: 390 GYHRNIYVATAIIDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIISAYA 437
Score = 75.9 bits (185), Expect = 3e-12
Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 1/126 (0%)
Frame = -1
Query: 386 VDKAMELFREMKNPSLSTWNAVLSGLVQNKCHELMPRLLREMQS-TGFRPNSVTLSSVLP 210
+D + ++F M + +WN+++SG Q +E L REM +GFRPN VT+ SVL
Sbjct: 177 LDLSRKVFDRMTKRDVVSWNSMISGYSQGGLYEDCKTLYREMVDFSGFRPNGVTVVSVLQ 236
Query: 209 TFSFYSNLKCGKQIHCYAIRNNYDTNIYVATAVIDLYAKGGYLLGAHQVFTQCSGKSLIV 30
+L G ++H + + N + +I V A+I LYAK G L A ++F + S K +
Sbjct: 237 ACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSLDYARELFDEMSEKDEVT 296
Query: 29 WTAIIS 12
+ AIIS
Sbjct: 297 YGAIIS 302
Score = 66.6 bits (161), Expect = 2e-09
Identities = 43/170 (25%), Positives = 85/170 (50%), Gaps = 2/170 (1%)
Frame = -1
Query: 506 IGLYAKCGVLDYAREEFDGMIGKDDISYGSMISGYMIHGFVDKAMELFREMKNPSLSTWN 327
+ LY+K L +AR FD + K+ SY +M+ Y +H A++LF SL++ N
Sbjct: 66 VALYSKTNHLAFARYVFDQIPHKNTFSYNAMLISYSLHNRHGDALDLF-----SSLASSN 120
Query: 326 AVLSGLVQNKCHELMPRLLREMQSTGFRPNSVTLSSVLPTFSFY--SNLKCGKQIHCYAI 153
V N+++++ +L + S + S++K GK++H + +
Sbjct: 121 LV---------------------------NNISITCLLKSLSSFTLSDVKLGKEVHGFVL 153
Query: 152 RNNYDTNIYVATAVIDLYAKGGYLLGAHQVFTQCSGKSLIVWTAIISAYA 3
R +D +++V A+I Y+K L + +VF + + + ++ W ++IS Y+
Sbjct: 154 RTGFDADVFVENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISGYS 203
>ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 224 bits (572), Expect = 4e-57
Identities = 113/168 (67%), Positives = 131/168 (77%)
Frame = -1
Query: 506 IGLYAKCGVLDYAREEFDGMIGKDDISYGSMISGYMIHGFVDKAMELFREMKNPSLSTWN 327
IGLYAKCG+LDYARE F+ M KD I+Y SMISGYM+HGFV++AM+LFRE + P L TWN
Sbjct: 252 IGLYAKCGILDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWN 311
Query: 326 AVLSGLVQNKCHELMPRLLREMQSTGFRPNSVTLSSVLPTFSFYSNLKCGKQIHCYAIRN 147
AV+SGLVQN E + R MQS G RPN+VTL+S+LP FS +S LK GK+IH YAIRN
Sbjct: 312 AVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRN 371
Query: 146 NYDTNIYVATAVIDLYAKGGYLLGAHQVFTQCSGKSLIVWTAIISAYA 3
YD NIYVATA+ID YAK GYL GA VF Q G+SLI WT+IISAYA
Sbjct: 372 TYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYA 419
Score = 59.7 bits (143), Expect = 2e-07
Identities = 38/170 (22%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
Frame = -1
Query: 500 LYAKCGVLDYAREEFDGMIGKDDISYGSMISGYMIHGFVDKAMELFREMKNPSLSTWNAV 321
L+ + G +AR ++ D+ +IS Y G + A +F ++ ++ +WNA+
Sbjct: 17 LFFRVGKQLHARLVLSSVV-PDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNAL 75
Query: 320 LSGLVQNKCHELMPRLLREM---QSTGFRPNSVTLSSVLPTF-SFYSNLKCGKQIHCYAI 153
+ H + +L + ST +P+ T++ L S +SN K++H + +
Sbjct: 76 FISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGLAKEVHSFIL 135
Query: 152 RNNYDTNIYVATAVIDLYAKGGYLLGAHQVFTQCSGKSLIVWTAIISAYA 3
R + +I+V A+I Y++ L+ A +F + + + W A+++ Y+
Sbjct: 136 RRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYS 185
Score = 59.3 bits (142), Expect = 3e-07
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Frame = -1
Query: 368 LFREMKNPSLSTWNAVLSGLVQNKCHELMPRLLREM-QSTGFRPNSVTLSSVLPTFSFYS 192
+F M +WNA+L+G Q +E L R M S +PN++T SVL + +
Sbjct: 165 MFDRMPERDTVSWNAMLAGYSQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQSN 224
Query: 191 NLKCGKQIHCYAIRNNYDTNIYVATAVIDLYAKGGYLLGAHQVFTQCSGKSLIVWTAIIS 12
+L G ++H + + ++ + AVI LYAK G L A ++F + K I + ++IS
Sbjct: 225 DLTFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGILDYARELFEEMPEKDGITYCSMIS 284
Query: 11 AY 6
Y
Sbjct: 285 GY 286
>ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 224 bits (571), Expect = 6e-57
Identities = 113/168 (67%), Positives = 131/168 (77%)
Frame = -1
Query: 506 IGLYAKCGVLDYAREEFDGMIGKDDISYGSMISGYMIHGFVDKAMELFREMKNPSLSTWN 327
IGLYAKCG LDYARE F+ M+ KD I+Y SMISGYM+HGFV++AM+LFRE + P L TWN
Sbjct: 252 IGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWN 311
Query: 326 AVLSGLVQNKCHELMPRLLREMQSTGFRPNSVTLSSVLPTFSFYSNLKCGKQIHCYAIRN 147
AV+SGLVQN E + R MQS G RPN+VTL+S+LP FS +S LK GK+IH YAIRN
Sbjct: 312 AVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRN 371
Query: 146 NYDTNIYVATAVIDLYAKGGYLLGAHQVFTQCSGKSLIVWTAIISAYA 3
YD NIYVATA+ID YAK GYL GA VF Q G+SLI WT+IISAYA
Sbjct: 372 TYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYA 419
Score = 63.2 bits (152), Expect = 2e-08
Identities = 39/170 (22%), Positives = 83/170 (48%), Gaps = 4/170 (2%)
Frame = -1
Query: 500 LYAKCGVLDYAREEFDGMIGKDDISYGSMISGYMIHGFVDKAMELFREMKNPSLSTWNAV 321
L+ + G +AR ++ D+ +IS Y G + A +F ++ ++ +WNA+
Sbjct: 17 LFFRVGKQLHARLVLSSVV-PDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNAL 75
Query: 320 LSGLVQNKCHELMPRLLREM---QSTGFRPNSVTLSSVLPTF-SFYSNLKCGKQIHCYAI 153
L + H + +L + ST +P+ T++ L S +SN K++H + +
Sbjct: 76 LISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGLAKEVHSFIL 135
Query: 152 RNNYDTNIYVATAVIDLYAKGGYLLGAHQVFTQCSGKSLIVWTAIISAYA 3
R + +I+V A+I Y++ L+ A +F + + ++ W A+++ Y+
Sbjct: 136 RRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYS 185
Score = 60.1 bits (144), Expect = 2e-07
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = -1
Query: 368 LFREMKNPSLSTWNAVLSGLVQNKCHELMPRLLREMQST-GFRPNSVTLSSVLPTFSFYS 192
+F M + +WNA+L+G Q +E L R M S+ +PN++T SVL + +
Sbjct: 165 MFDRMPERDIVSWNAMLAGYSQGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQSN 224
Query: 191 NLKCGKQIHCYAIRNNYDTNIYVATAVIDLYAKGGYLLGAHQVFTQCSGKSLIVWTAIIS 12
+L G ++H + + ++ + AVI LYAK G L A ++F + K I + ++IS
Sbjct: 225 DLIFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMIS 284
Query: 11 AY 6
Y
Sbjct: 285 GY 286